ClCG05G001580 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G001580
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 1595450 .. 1597293 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATTTCGAATTCCATTGCCCTCCAAAATCCCAAGTTTTGCATTCGAGATTCGAATTTCGTTGCTCAGATCTTTCAATCCTACTTTCTGTAGAAACTGGCTGTGATTATAAACTCAAACATGTCTCCAGACAAACCCGGTGAAGACGCCGGGGTTTCTGGATTTGAATCCGAAGAAACCGAGCCCGATTCTGAGCTTGAGGAGCTGGAGCTTGAAGTTAAGCAAATGGCACAGAGGATTCTTCACTACAGATCCACCCTGTCGGCACAACTCAAATCCTCGTTCTTTTCGTTACTTGAGTCCTCGAGGCCTCTAGCCGTTGGAGCCTCGGAGTCGGGAATATCTGCTCGTCCGGATCATGAAGGTGGGATTCTGAGACTGTAATTCTAGTTGTTTGAGGTTTAATAGTGATTTGGGTGGGTTTTCTTTCTTGCTCGGAACTGGTAGATTTGCATCTGTTTTCTTCGTTTTATCTTGTTTGTCCGAGCTGTATCTCTGTTTTATTTCATTCTATCCTTTCTATTAAGAGCATTGAGTTTAATTTTGTGGCTAGTTAGGATGAGTACTTTGTTGTGGGTTCTTTGGAGGAAGAGAAACAATAGAATTTTCAGAGAAGTTGTTAGCCATTTTTTGATGTGTGGTTCCTTGTGAATTTTTTTTCGGTTATTATTCACTAGGGCTTATTTTGCTTGATTGAAGCTTTTGTTAGGGTTGCTGCATTTTGTGGGAATTTTTTCCCCCACAATAAAAGTTGGTTTTTATCAACCAAAAAAAAAAAAAAAAAAGTAGTATGATAGTTGTAGAAAAATACTACACTGTATGTGTTCAATCGTATCTTTTATATGTTAAATTTACAACCTATGTTCTATTGAGTTTTGTTAGGCTGTAACTCCTCATTGCTTGTTGTTGAGCTAGTTTTCACTGTGTAAGCTGTTTTTGCTGTTTGGGGGTAGGGTTGGCAACAGGGCCGGGGGTGGGACGCTCCTGTGGGGGAAATTTACCCCATCTCTGCCCCTGTCCTTGTCCTCTCCGCCATTTGTAGGTGGGGGCGGGGATTCCCGTTTAATATCCGCGAGAATGAGCGAGCGAGACAACGATCCCTGCTTTTGTGTTCCTTTTGCTCTTAAATCATTTTTGTCATTAGATTTAAAGTTTGCAAGTGGTTCGGATAATTCATGCATATTTTGATTGGTTATGAATGCCAACCTACGATTTTTTTTACCTTTTAGACTTGTTAGTGAGCTTATTTTTAAGGATTTACTTTGGTGACAATATTGGTGTCTGGTGGTACAGAAGAGTTATTTCCTTGATATTAGGATAAACTTTTATTCTGATGATTTATATCCTCTTTACTCATCTGTTCAGTGTGATTGACAAATCCCTTTATTATGCAGACGATGAACAAACCACAAGAGGTGAAGACACAGTCCTTCATGAAGAGAGTTTAGAAACTGCAAAGAAGATACAATTGCTTAAAGATAAAATATCAAGTAATATCACTACGATCCCTACAGTCTTGAAGAGGATGAAAGACTGTATTTCAACAATTGACAAATTGGATTCTTATAATGGAGTCATTCATCCTGCATTCAAAAGGAAAAAAAACTAGCTGAATTTAGCTGTGGCGGTTATTTTAGTGGCACATTACTTTACAAGGGAGTCTTGAGTGTAGTACGATTATTGAGTTAGATGTGTAGTGTATTGAGCTTTACATTGTGTTGTCAAAAGGGCTGATTTCTCTACAATTTGCACTCCAGAATATGTAACATAAATTTTTGTGTATAACCTTATTGATGACACTAGCTTTCCATTTGTTGATGTATAAAATTCTTGTAATATTGAAC

mRNA sequence

CAAATTTCGAATTCCATTGCCCTCCAAAATCCCAAGTTTTGCATTCGAGATTCGAATTTCGTTGCTCAGATCTTTCAATCCTACTTTCTGTAGAAACTGGCTGTGATTATAAACTCAAACATGTCTCCAGACAAACCCGGTGAAGACGCCGGGGTTTCTGGATTTGAATCCGAAGAAACCGAGCCCGATTCTGAGCTTGAGGAGCTGGAGCTTGAAGTTAAGCAAATGGCACAGAGGATTCTTCACTACAGATCCACCCTGTCGGCACAACTCAAATCCTCGTTCTTTTCGTTACTTGAGTCCTCGAGGCCTCTAGCCGTTGGAGCCTCGGAGTCGGGAATATCTGCTCGTCCGGATCATGAAGACGATGAACAAACCACAAGAGGTGAAGACACAGTCCTTCATGAAGAGAGTTTAGAAACTGCAAAGAAGATACAATTGCTTAAAGATAAAATATCAAGTAATATCACTACGATCCCTACAGTCTTGAAGAGGATGAAAGACTGTATTTCAACAATTGACAAATTGGATTCTTATAATGGAGTCATTCATCCTGCATTCAAAAGGAAAAAAAACTAGCTGAATTTAGCTGTGGCGGTTATTTTAGTGGCACATTACTTTACAAGGGAGTCTTGAGTGTAGTACGATTATTGAGTTAGATGTGTAGTGTATTGAGCTTTACATTGTGTTGTCAAAAGGGCTGATTTCTCTACAATTTGCACTCCAGAATATGTAACATAAATTTTTGTGTATAACCTTATTGATGACACTAGCTTTCCATTTGTTGATGTATAAAATTCTTGTAATATTGAAC

Coding sequence (CDS)

ATGTCTCCAGACAAACCCGGTGAAGACGCCGGGGTTTCTGGATTTGAATCCGAAGAAACCGAGCCCGATTCTGAGCTTGAGGAGCTGGAGCTTGAAGTTAAGCAAATGGCACAGAGGATTCTTCACTACAGATCCACCCTGTCGGCACAACTCAAATCCTCGTTCTTTTCGTTACTTGAGTCCTCGAGGCCTCTAGCCGTTGGAGCCTCGGAGTCGGGAATATCTGCTCGTCCGGATCATGAAGACGATGAACAAACCACAAGAGGTGAAGACACAGTCCTTCATGAAGAGAGTTTAGAAACTGCAAAGAAGATACAATTGCTTAAAGATAAAATATCAAGTAATATCACTACGATCCCTACAGTCTTGAAGAGGATGAAAGACTGTATTTCAACAATTGACAAATTGGATTCTTATAATGGAGTCATTCATCCTGCATTCAAAAGGAAAAAAAACTAG

Protein sequence

MSPDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAVGASESGISARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNITTIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKN
Homology
[Close]
BLAST of ClCG05G001580 vs. TrEMBL
Match: A0A0A0L8X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122450 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.0e-69
Identity = 139/151 (92.05%), Postives = 143/151 (94.70%), Query Frame = 1 

Query: 1   MSPDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLE 60
           MSPDKPGEDAGVSGFE EETEPDSELEELELEV+QMAQRILHYRSTLSAQ+KSSF SLLE
Sbjct: 1   MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE 60

Query: 61  SSRPLAVGASESGISARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNITTIP 120
           SSRPLA+ ASE GISARPDHEDDEQTTRGEDT LHEE LETAKKIQL+KDKISSN T IP
Sbjct: 61  SSRPLAI-ASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIP 120

Query: 121 TVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 152
           TVLKRMKDCISTIDKLDSYNGVIHPAFKRKK
Sbjct: 121 TVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 150

[Close]
BLAST of ClCG05G001580 vs. TrEMBL
Match: B9GQ90_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16050g PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-28
Identity = 78/156 (50.00%), Postives = 105/156 (67.31%), Query Frame = 1 

Query: 2   SPDKPG---EDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSL 61
           SP+KP    ED      E+E+ E   ELE+LE +VKQMA++IL YR TL  QLK++   L
Sbjct: 12  SPEKPESKFED------EAEDEEEAEELEQLETQVKQMAKKILEYRVTLPDQLKTTLALL 71

Query: 62  LESSRPLAV---GASESGISARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSN 121
           L S RP+       S+ G S   +    ++++R    +L +E  +TA+K+ LLK+KISSN
Sbjct: 72  LSSQRPILPDCDSGSDPGPSGELNPGGQDKSSRA--ALLTKEDRKTAEKVHLLKEKISSN 131

Query: 122 ITTIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 152
           ++T+P VLKRMKDCIS I+KLDSYNG IHPAFK+KK
Sbjct: 132 VSTMPVVLKRMKDCISRINKLDSYNGSIHPAFKKKK 159

[Close]
BLAST of ClCG05G001580 vs. TrEMBL
Match: B9I8I5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07880g PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.3e-28
Identity = 75/142 (52.82%), Postives = 97/142 (68.31%), Query Frame = 1 

Query: 13  SGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAV---GA 72
           S FE EE E + +LE+LE EVKQMA++IL YR+TL  QLK++  SLL S RP+       
Sbjct: 18  SRFEEEEEEVE-KLEKLETEVKQMAKKILEYRTTLPDQLKTTVASLLSSQRPVLRHFDSG 77

Query: 73  SESGISARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNITTIPTVLKRMKDC 132
           S+ G S   + +   Q T     +L EE  +TA+K  LLK+KISSN++ +P VLKRM+DC
Sbjct: 78  SDPGSSGELNPDSGGQDTSSRAALLTEEDRKTAEKTHLLKEKISSNVSAMPVVLKRMEDC 137

Query: 133 ISTIDKLDSYNGVIHPAFKRKK 152
           IS IDKL SYNG IHPAFK+K+
Sbjct: 138 ISKIDKLYSYNGSIHPAFKKKR 158

[Close]
BLAST of ClCG05G001580 vs. TrEMBL
Match: A0A067HDZ7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031490mg PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.7e-27
Identity = 76/153 (49.67%), Postives = 101/153 (66.01%), Query Frame = 1 

Query: 4   DKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSR 63
           D  G + G    E EE     ELE LE +VK+MAQ+IL YR+TL  QLK +F ++L + R
Sbjct: 15  DFRGAECGPGESEREE----EELENLESDVKKMAQKILEYRATLPDQLKHTFATILSAQR 74

Query: 64  PLAVG---ASESGIS--ARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNITT 123
           P+  G    SE G S  A PD+E        E T   EE  + ++K+ LLK+KISSN++ 
Sbjct: 75  PIFPGFVSVSEPGPSGKANPDNES-------EGTTPMEEEQKASEKVHLLKEKISSNMSA 134

Query: 124 IPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 152
           +PTVLKR+K+CIS ID+LDSY+G+IHPAFKRK+
Sbjct: 135 MPTVLKRVKECISKIDELDSYSGIIHPAFKRKR 156

[Close]
BLAST of ClCG05G001580 vs. TrEMBL
Match: V4VY04_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022632mg PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.3e-27
Identity = 74/141 (52.48%), Postives = 98/141 (69.50%), Query Frame = 1 

Query: 16  ESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAVG---ASES 75
           ESE  E D  LE LE +VK+MAQ+IL YR+TL  QLK +F ++L + RP+  G    SE 
Sbjct: 25  ESEREEED--LENLESDVKKMAQKILEYRATLPDQLKHTFATILSAQRPIFPGFVSVSEP 84

Query: 76  GIS--ARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNITTIPTVLKRMKDCI 135
           G S  A PD+E        E T   EE  + ++K+ LLK+KISSN++ +PTVLKR+K+CI
Sbjct: 85  GPSGKANPDNES-------EGTTPMEEEQKASEKVHLLKEKISSNMSAMPTVLKRVKECI 144

Query: 136 STIDKLDSYNGVIHPAFKRKK 152
           S ID+LDSY+G+IHPAFKRK+
Sbjct: 145 SKIDELDSYSGIIHPAFKRKR 156

[Close]
BLAST of ClCG05G001580 vs. TAIR10
Match: AT4G00525.1 (AT4G00525.1 unknown protein)

HSP 1 Score: 82.0 bits (201), Expect = 3.4e-16
Identity = 54/131 (41.22%), Postives = 73/131 (55.73%), Query Frame = 1 

Query: 23  DSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAVGASESGISARPDHED 82
           + +LE+LE +VKQMA++I  YR TL   L+++  S L S  P+        I +  D   
Sbjct: 14  EGDLEKLESDVKQMAKKISEYRQTLPDHLRNTLDSALSSHIPVF-----PNIDSGSDPLP 73

Query: 83  DEQTTRGEDTV--LHEESLETAKKIQLLKDKISSNITTIPTVLKRMKDCISTIDKLDSYN 142
               T  E  V  + EE     K IQL K+++S N   IP V+KRM++CI +IDKLDS  
Sbjct: 74  SSCLTIAEAQVPGVLEEQDSEEKWIQL-KERMSRNAANIPKVVKRMRECIESIDKLDSLE 133

Query: 143 GVIHPAFKRKK 152
             IHPAFKR++
Sbjct: 134 VTIHPAFKRQR 138

[Close]
BLAST of ClCG05G001580 vs. NCBI nr
Match: gi|449432158|ref|XP_004133867.1| (PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 4.3e-69
Identity = 139/151 (92.05%), Postives = 143/151 (94.70%), Query Frame = 1 

Query: 1   MSPDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLE 60
           MSPDKPGEDAGVSGFE EETEPDSELEELELEV+QMAQRILHYRSTLSAQ+KSSF SLLE
Sbjct: 1   MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE 60

Query: 61  SSRPLAVGASESGISARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNITTIP 120
           SSRPLA+ ASE GISARPDHEDDEQTTRGEDT LHEE LETAKKIQL+KDKISSN T IP
Sbjct: 61  SSRPLAI-ASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIP 120

Query: 121 TVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 152
           TVLKRMKDCISTIDKLDSYNGVIHPAFKRKK
Sbjct: 121 TVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 150

[Close]
BLAST of ClCG05G001580 vs. NCBI nr
Match: gi|659075272|ref|XP_008438056.1| (PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 8.1e-68
Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 1 

Query: 1   MSPDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLE 60
           MS DKPGEDAGVSGFESEETEPDSELEELELEV+QMAQRILHYRST+ A++KSSF SLLE
Sbjct: 1   MSSDKPGEDAGVSGFESEETEPDSELEELELEVQQMAQRILHYRSTMWAEIKSSFCSLLE 60

Query: 61  SSRPLAVGASESGISARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNITTIP 120
           SSRPLA+ ASE GISARP HEDDEQTTRGEDT+LHEE LETAKKIQL+KDKISSNIT IP
Sbjct: 61  SSRPLAI-ASEPGISARPYHEDDEQTTRGEDTILHEEGLETAKKIQLMKDKISSNITMIP 120

Query: 121 TVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 152
           TVLKRMKDCISTIDKLDSYNGVIHPAFKRKK
Sbjct: 121 TVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 150

[Close]
BLAST of ClCG05G001580 vs. NCBI nr
Match: gi|743789357|ref|XP_011036139.1| (PREDICTED: uncharacterized protein LOC105133741 isoform X1 [Populus euphratica])

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 80/153 (52.29%), Postives = 103/153 (67.32%), Query Frame = 1 

Query: 2   SPDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLES 61
           SP+KP      SGFE EE E + +LE+LE EVKQMA+RIL YR+TL  QLK++  SLL S
Sbjct: 12  SPEKPE-----SGFEEEEEEVE-KLEKLETEVKQMAKRILEYRTTLPDQLKTTVASLLSS 71

Query: 62  SRPLAV---GASESGISARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNITT 121
            RP+       S+ G S   + +   Q T     +L EE  +TA+K  LLK+KISSN++ 
Sbjct: 72  QRPVLPHFDSGSDPGPSGELNPDSGGQDTSSRAALLTEEDRKTAEKTHLLKEKISSNVSA 131

Query: 122 IPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 152
           +P VLKRM+DCIS ID+L SYNG IHPAFK+K+
Sbjct: 132 MPVVLKRMEDCISKIDELYSYNGSIHPAFKKKR 158

[Close]
BLAST of ClCG05G001580 vs. NCBI nr
Match: gi|743828764|ref|XP_011023349.1| (PREDICTED: uncharacterized protein LOC105124874 isoform X1 [Populus euphratica])

HSP 1 Score: 136.7 bits (343), Expect = 3.3e-29
Identity = 78/154 (50.65%), Postives = 103/154 (66.88%), Query Frame = 1 

Query: 2   SPDKPGEDAGVSGFESEETEPDSE-LEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLE 61
           SP+KP      S FE E  E ++E LE+LE +VKQMA++IL YR+TL  QLK++   LL 
Sbjct: 12  SPEKPE-----SKFEDESEEEEAEELEQLETQVKQMAKKILEYRATLPDQLKTTLALLLS 71

Query: 62  SSRPLAV---GASESGISARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNIT 121
           S RPL       S+ G S   + +   Q       +L +E  +TA+K+ LLK+KISSN++
Sbjct: 72  SQRPLLPDCDSGSDPGPSGELNPDSGGQDKSSRAALLTKEDRKTAEKVHLLKEKISSNVS 131

Query: 122 TIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 152
           T+P VLKRMKDCIS I+KLDSYNG IHPAFK+K+
Sbjct: 132 TMPVVLKRMKDCISRINKLDSYNGSIHPAFKKKR 160

[Close]
BLAST of ClCG05G001580 vs. NCBI nr
Match: gi|743828766|ref|XP_011023350.1| (PREDICTED: uncharacterized protein LOC105124874 isoform X2 [Populus euphratica])

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 78/154 (50.65%), Postives = 106/154 (68.83%), Query Frame = 1 

Query: 2   SPDKPGEDAGVSGFESEETEPDSE-LEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLE 61
           SP+KP      S FE E  E ++E LE+LE +VKQMA++IL YR+TL  QLK++   LL 
Sbjct: 12  SPEKPE-----SKFEDESEEEEAEELEQLETQVKQMAKKILEYRATLPDQLKTTLALLLS 71

Query: 62  SSRPLAV---GASESGISARPDHEDDEQTTRGEDTVLHEESLETAKKIQLLKDKISSNIT 121
           S RPL       S+ G S   +    ++++R    +L +E  +TA+K+ LLK+KISSN++
Sbjct: 72  SQRPLLPDCDSGSDPGPSGELNPGGQDKSSRA--ALLTKEDRKTAEKVHLLKEKISSNVS 131

Query: 122 TIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 152
           T+P VLKRMKDCIS I+KLDSYNG IHPAFK+K+
Sbjct: 132 TMPVVLKRMKDCISRINKLDSYNGSIHPAFKKKR 158

The following BLAST results are available for this feature:
BLAST of ClCG05G001580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8X5_CUCSA3.0e-6992.05Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122450 PE=4 SV=1[more]
B9GQ90_POPTR2.5e-2850.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16050g PE=4 SV=1[more]
B9I8I5_POPTR4.3e-2852.82Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07880g PE=4 SV=1[more]
A0A067HDZ7_CITSI3.7e-2749.67Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031490mg PE=4 SV=1[more]
V4VY04_9ROSI6.3e-2752.48Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022632mg PE=4 SV=1[more]
BLAST of ClCG05G001580 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00525.13.4e-1641.22 unknown protein[more]
BLAST of ClCG05G001580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432158|ref|XP_004133867.1|4.3e-6992.05PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus][more]
gi|659075272|ref|XP_008438056.1|8.1e-6890.07PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo][more]
gi|743789357|ref|XP_011036139.1|1.5e-2952.29PREDICTED: uncharacterized protein LOC105133741 isoform X1 [Populus euphratica][more]
gi|743828764|ref|XP_011023349.1|3.3e-2950.65PREDICTED: uncharacterized protein LOC105124874 isoform X1 [Populus euphratica][more]
gi|743828766|ref|XP_011023350.1|1.3e-2850.65PREDICTED: uncharacterized protein LOC105124874 isoform X2 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G001580.1ClCG05G001580.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 26..46
scor
NoneNo IPR availablePANTHERPTHR36045FAMILY NOT NAMEDcoord: 16..152
score: 1.3
NoneNo IPR availablePANTHERPTHR36045:SF1SUBFAMILY NOT NAMEDcoord: 16..152
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G001580Csa3G122450Cucumber (Chinese Long) v2cuwcgB222
ClCG05G001580MELO3C006115Melon (DHL92) v3.5.1mewcgB427
ClCG05G001580Cla021241Watermelon (97103) v1wcgwmB286
ClCG05G001580Cla97C05G081970Watermelon (97103) v2wcgwmbB229
ClCG05G001580Bhi01G000260Wax gourdwcgwgoB430
ClCG05G001580CSPI03G08830Wild cucumber (PI 183967)cpiwcgB226
ClCG05G001580Cucsa.258320Cucumber (Gy14) v1cgywcgB451
ClCG05G001580CmaCh14G020340Cucurbita maxima (Rimu)cmawcgB233
ClCG05G001580CmaCh06G010630Cucurbita maxima (Rimu)cmawcgB740
ClCG05G001580CmoCh06G010840Cucurbita moschata (Rifu)cmowcgB744
ClCG05G001580CmoCh14G020930Cucurbita moschata (Rifu)cmowcgB219
ClCG05G001580Lsi05G020340Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G001580Cp4.1LG03g16860Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G001580Cp4.1LG08g01160Cucurbita pepo (Zucchini)cpewcgB786
ClCG05G001580CsGy3G008910Cucumber (Gy14) v2cgybwcgB203
ClCG05G001580MELO3C006115.2Melon (DHL92) v3.6.1medwcgB416
ClCG05G001580Carg21006Silver-seed gourdcarwcgB0474
ClCG05G001580Carg24641Silver-seed gourdcarwcgB0376
ClCG05G001580CsaV3_3G008970Cucumber (Chinese Long) v3cucwcgB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G001580Watermelon (Charleston Gray)wcgwcgB154
ClCG05G001580Cucurbita maxima (Rimu)cmawcgB563
ClCG05G001580Cucurbita maxima (Rimu)cmawcgB737
ClCG05G001580Cucurbita moschata (Rifu)cmowcgB363
ClCG05G001580Cucurbita moschata (Rifu)cmowcgB560
ClCG05G001580Cucurbita moschata (Rifu)cmowcgB743
ClCG05G001580Melon (DHL92) v3.5.1mewcgB433
ClCG05G001580Watermelon (97103) v1wcgwmB290
ClCG05G001580Cucurbita pepo (Zucchini)cpewcgB044
ClCG05G001580Cucurbita pepo (Zucchini)cpewcgB680
ClCG05G001580Cucurbita pepo (Zucchini)cpewcgB787