Cucsa.258320 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.258320
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	T1N6.11
Location	scaffold02229 : 5316224 .. 5317932 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCCAGACAAACCCGGTGAAGATGCCGGGGTTTCTGGATTTGAACCCGAAGAAACCGAGCCCGATTCCGAGCTTGAGGAGCTGGAGCTTGAAGTTCAGCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTGTCGGCTCAAATCAAGTCCTCATTCTGTTCGTTACTTGAATCCTCGAGGCCTCTCGCCATAGCCTCGGAACCAGGAATATCTGCTCGTCCGGATCATGAAGGTGGGATTCTTAGACTGTAATTTTAGTTTGTTTGGGTTTGAATAGTGATTTTGGGTGGATTTTCTTTCTTCCTCTGAACTGGTAGATTTGCTGCCTCTATTATTTTGCTCGATTGGAGCCTTTTTAGGGTTCCTCAATTTTGTGGGTCTTTGTTTTCCTCATAAAAGTTGGTTTTtACCAATAAAAAaGGATAAAAAAAAaGTGAGCCTCTGTACTTCTTTTGGTGTAGTTTTTtATAAGTATGATAGTTGTAGGGAATAAATTGATTGTGTGTACAAGCTCTGGAGAAATGTTACATTATATATATAAACTTTTGTATTTTAAATTTACAATCCATATCCTATTGAGTTTAGTTATCTTGTAATTTTTCATTGCTTGTTGTTGAGCCAGTTTTCACTGTTCTTGCTGTTTGGGTGGGTATTTCTTTCGGCAGCAAACATTCTAATGAAACTATTGCATCAAAAGTTCATAATGGAAGTCATAATTCTTGCTCTAGTCTAGGCTTACAAATAAGGATCTTAGGTTGTCTTATGGGAGATCTGAGTTGAGAGAAATTTCAGGACTTCTCTACCCTAGGATTTATTTTAGCTTTTGGGATTGTTTCATACTATTGTTTGCTGATTTGGTCCTTCTTTATGAAATTTCTTTTAGATTTTGGGATGAATTTGCTTCTTCCCTTGCTTTTGTGTTCCTTTTGATCCGTTAATCTCATGGTCTGTCAAAGTCTGCATGTCGTCCCCATTTTAGATCTTTCTCATTTCATAAATCACTCTTGTCTTTTGGATAAGATTTAAAGATTAAATTTTGTGAATACTTCAGATATTCATGCATATTTTGATTGGTTATGAATGCAGAGCTAGGATTTTTCATTTTTCTTTCTGTATATCAAGTTTCAAAAGCAATTATTGACCTTTTGGACTCGTTAATGTATATATGGATGCATGCGTTTTCTTAACAATATGTGGGGGTGAGATTTATGAAACAACACTAGGTTGGTTGAAGATTATGATGAACTTTTATTATGACGGTTTATATATTTGTTACTCAGCTATTGCGTCTAATTAACAAATTCCTTTATCATGCAGATGATGAGCAAACCACAAGAGGAGAAGACACAAATCTTCATGAAGAGGGTTTAGAAACTGCAAAGAAGATACAATTGATTAAAGATAAAATATCAAGTAATAATACTATGATCCCTACAGTCCTGAAGAGGATGAAAGACTGTATTTCAACGATTGACAAATTGGATTCTTATAATGGAGTCATTCATCCTGCATTCAAAAGGAAAAAAaCTAGCTGAATTTAATTGGTATACCTATGGTTGTTATTTTAGTGACAATTTACTTTCACGTGGGAGTCATTGAGTGTAGTATCATTATTGAGTTAGATGTTTAGTGTATTGAGCTTTACAATGTGTTGTCAAAAGGGGCTGAATATGTAGCATAACGTTTTGTGTATAAGGTAA

mRNA sequence

ATGTCCCCAGACAAACCCGGTGAAGATGCCGGGGTTTCTGGATTTGAACCCGAAGAAACCGAGCCCGATTCCGAGCTTGAGGAGCTGGAGCTTGAAGTTCAGCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTGTCGGCTCAAATCAAGTCCTCATTCTGTTCGTTACTTGAATCCTCGAGGCCTCTCGCCATAGCCTCGGAACCAGGAATATCTGCTCGTCCGGATCATGAAGATGATGAGCAAACCACAAGAGGAGAAGACACAAATCTTCATGAAGAGGGTTTAGAAACTGCAAAGAAGATACAATTGATTAAAGATAAAATATCAAGTAATAATACTATGATCCCTACAGTCCTGAAGAGGATGAAAGACTGTATTTCAACGATTGACAAATTGGATTCTTATAATGGAGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGAATTTAATTGGTATACCTATGGTTGTTATTTTAGTGACAATTTACTTTCACGTGGGAGTCATTGAGTGTAGTATCATTATTGAGTTAGATGTTTAGTGTATTGAGCTTTACAATGTGTTGTCAAAAGGGGCTGAATATGTAGCATAACGTTTTGTGTATAAGGTAA

Coding sequence (CDS)

ATGTCCCCAGACAAACCCGGTGAAGATGCCGGGGTTTCTGGATTTGAACCCGAAGAAACCGAGCCCGATTCCGAGCTTGAGGAGCTGGAGCTTGAAGTTCAGCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTGTCGGCTCAAATCAAGTCCTCATTCTGTTCGTTACTTGAATCCTCGAGGCCTCTCGCCATAGCCTCGGAACCAGGAATATCTGCTCGTCCGGATCATGAAGATGATGAGCAAACCACAAGAGGAGAAGACACAAATCTTCATGAAGAGGGTTTAGAAACTGCAAAGAAGATACAATTGATTAAAGATAAAATATCAAGTAATAATACTATGATCCCTACAGTCCTGAAGAGGATGAAAGACTGTATTTCAACGATTGACAAATTGGATTCTTATAATGGAGTCATTCATCCTGCATTCAAAAGGAAAAAAaCTAGCTGA

Protein sequence

MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLESSRPLAIASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS*

Homology

[Close]

BLAST of Cucsa.258320 vs. TrEMBL
Match: A0A0A0L8X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122450 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.4e-79
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


Query: 1   MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE 60
           MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE
Sbjct: 1   MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE 60

Query: 61  SSRPLAIASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPT 120
           SSRPLAIASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPT
Sbjct: 61  SSRPLAIASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPT 120

Query: 121 VLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS 153
           VLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS
Sbjct: 121 VLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS 152

[Close]

BLAST of Cucsa.258320 vs. TrEMBL
Match: B9I8I5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07880g PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.5e-28
Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 1


Query: 13  SGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLESSRPLA----IA 72
           S FE EE E + +LE+LE EV+QMA++IL YR+TL  Q+K++  SLL S RP+       
Sbjct: 18  SRFEEEEEEVE-KLEKLETEVKQMAKKILEYRTTLPDQLKTTVASLLSSQRPVLRHFDSG 77

Query: 73  SEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPTVLKRMKDC 132
           S+PG S   + +   Q T      L EE  +TA+K  L+K+KISSN + +P VLKRM+DC
Sbjct: 78  SDPGSSGELNPDSGGQDTSSRAALLTEEDRKTAEKTHLLKEKISSNVSAMPVVLKRMEDC 137

Query: 133 ISTIDKLDSYNGVIHPAFKRKKTS 153
           IS IDKL SYNG IHPAFK+K+TS
Sbjct: 138 ISKIDKLYSYNGSIHPAFKKKRTS 160

[Close]

BLAST of Cucsa.258320 vs. TrEMBL
Match: B9GQ90_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16050g PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 8.3e-27
Identity = 76/157 (48.41%), Postives = 103/157 (65.61%), Query Frame = 1


Query: 2   SPDKPG---EDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSL 61
           SP+KP    ED      E E+ E   ELE+LE +V+QMA++IL YR TL  Q+K++   L
Sbjct: 12  SPEKPESKFED------EAEDEEEAEELEQLETQVKQMAKKILEYRVTLPDQLKTTLALL 71

Query: 62  LESSRPLA----IASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSN 121
           L S RP+       S+PG S   +    ++++R     L +E  +TA+K+ L+K+KISSN
Sbjct: 72  LSSQRPILPDCDSGSDPGPSGELNPGGQDKSSRA--ALLTKEDRKTAEKVHLLKEKISSN 131

Query: 122 NTMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKT 152
            + +P VLKRMKDCIS I+KLDSYNG IHPAFK+KKT
Sbjct: 132 VSTMPVVLKRMKDCISRINKLDSYNGSIHPAFKKKKT 160

[Close]

BLAST of Cucsa.258320 vs. TrEMBL
Match: A0A067HDZ7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031490mg PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-26
Identity = 74/155 (47.74%), Postives = 101/155 (65.16%), Query Frame = 1


Query: 4   DKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLESSR 63
           D  G + G    E EE     ELE LE +V++MAQ+IL YR+TL  Q+K +F ++L + R
Sbjct: 15  DFRGAECGPGESEREE----EELENLESDVKKMAQKILEYRATLPDQLKHTFATILSAQR 74

Query: 64  PL----AIASEPGIS--ARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTM 123
           P+       SEPG S  A PD+E        E T   EE  + ++K+ L+K+KISSN + 
Sbjct: 75  PIFPGFVSVSEPGPSGKANPDNES-------EGTTPMEEEQKASEKVHLLKEKISSNMSA 134

Query: 124 IPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS 153
           +PTVLKR+K+CIS ID+LDSY+G+IHPAFKRK+ S
Sbjct: 135 MPTVLKRVKECISKIDELDSYSGIIHPAFKRKRPS 158

[Close]

BLAST of Cucsa.258320 vs. TrEMBL
Match: F6GVE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00850 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.1e-26
Identity = 69/145 (47.59%), Postives = 96/145 (66.21%), Query Frame = 1


Query: 13  SGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLESSRP----LAIA 72
           S  +P E     ELEELE +V++MAQ++ HYR+TL  Q+K++F S+L S RP        
Sbjct: 10  SSGDPMEGSDAEELEELEADVKEMAQKVRHYRTTLPDQLKATFTSILSSQRPPFLEFVSG 69

Query: 73  SEPGISARPDHEDDEQTTRGEDTNLHEEG-LETAKKIQLIKDKISSNNTMIPTVLKRMKD 132
           SEP  S  P+         G+   L  +G  ET++KIQL+K KISSN + IP +LKR+ +
Sbjct: 70  SEPEASGEPNP--------GQSRVLLAQGDHETSEKIQLLKQKISSNVSTIPVLLKRLNE 129

Query: 133 CISTIDKLDSYNGVIHPAFKRKKTS 153
           C+S +DKLDSYNG++HPAFKR++TS
Sbjct: 130 CMSMVDKLDSYNGIMHPAFKRRRTS 146

[Close]

BLAST of Cucsa.258320 vs. TAIR10
Match: AT4G00525.1 (AT4G00525.1 unknown protein)

HSP 1 Score: 82.4 bits (202), Expect = 2.6e-16
Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 1


Query: 16  EPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLESSRPLAIASEPGISA 75
           +PE    + +LE+LE +V+QMA++I  YR TL   ++++  S L S  P+     P I +
Sbjct: 7   DPELDMDEGDLEKLESDVKQMAKKISEYRQTLPDHLRNTLDSALSSHIPVF----PNIDS 66

Query: 76  RPDHEDDEQTTRGEDT--NLHEEGLETAKKIQLIKDKISSNNTMIPTVLKRMKDCISTID 135
             D       T  E     + EE     K IQL K+++S N   IP V+KRM++CI +ID
Sbjct: 67  GSDPLPSSCLTIAEAQVPGVLEEQDSEEKWIQL-KERMSRNAANIPKVVKRMRECIESID 126

Query: 136 KLDSYNGVIHPAFKRKK 151
           KLDS    IHPAFKR++
Sbjct: 127 KLDSLEVTIHPAFKRQR 138

[Close]

BLAST of Cucsa.258320 vs. NCBI nr
Match: gi|449432158|ref|XP_004133867.1| (PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 3.5e-79
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


Query: 1   MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE 60
           MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE
Sbjct: 1   MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE 60

Query: 61  SSRPLAIASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPT 120
           SSRPLAIASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPT
Sbjct: 61  SSRPLAIASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPT 120

Query: 121 VLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS 153
           VLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS
Sbjct: 121 VLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS 152

[Close]

BLAST of Cucsa.258320 vs. NCBI nr
Match: gi|659075272|ref|XP_008438056.1| (PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo])

HSP 1 Score: 276.9 bits (707), Expect = 2.1e-71
Identity = 141/150 (94.00%), Postives = 144/150 (96.00%), Query Frame = 1


Query: 1   MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE 60
           MS DKPGEDAGVSGFE EETEPDSELEELELEVQQMAQRILHYRST+ A+IKSSFCSLLE
Sbjct: 1   MSSDKPGEDAGVSGFESEETEPDSELEELELEVQQMAQRILHYRSTMWAEIKSSFCSLLE 60

Query: 61  SSRPLAIASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPT 120
           SSRPLAIASEPGISARP HEDDEQTTRGEDT LHEEGLETAKKIQL+KDKISSN TMIPT
Sbjct: 61  SSRPLAIASEPGISARPYHEDDEQTTRGEDTILHEEGLETAKKIQLMKDKISSNITMIPT 120

Query: 121 VLKRMKDCISTIDKLDSYNGVIHPAFKRKK 151
           VLKRMKDCISTIDKLDSYNGVIHPAFKRKK
Sbjct: 121 VLKRMKDCISTIDKLDSYNGVIHPAFKRKK 150

[Close]

BLAST of Cucsa.258320 vs. NCBI nr
Match: gi|743789357|ref|XP_011036139.1| (PREDICTED: uncharacterized protein LOC105133741 isoform X1 [Populus euphratica])

HSP 1 Score: 136.7 bits (343), Expect = 3.3e-29
Identity = 80/155 (51.61%), Postives = 104/155 (67.10%), Query Frame = 1


Query: 2   SPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLES 61
           SP+KP      SGFE EE E + +LE+LE EV+QMA+RIL YR+TL  Q+K++  SLL S
Sbjct: 12  SPEKPE-----SGFEEEEEEVE-KLEKLETEVKQMAKRILEYRTTLPDQLKTTVASLLSS 71

Query: 62  SRPLA----IASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTM 121
            RP+       S+PG S   + +   Q T      L EE  +TA+K  L+K+KISSN + 
Sbjct: 72  QRPVLPHFDSGSDPGPSGELNPDSGGQDTSSRAALLTEEDRKTAEKTHLLKEKISSNVSA 131

Query: 122 IPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS 153
           +P VLKRM+DCIS ID+L SYNG IHPAFK+K+TS
Sbjct: 132 MPVVLKRMEDCISKIDELYSYNGSIHPAFKKKRTS 160

[Close]

BLAST of Cucsa.258320 vs. NCBI nr
Match: gi|743828764|ref|XP_011023349.1| (PREDICTED: uncharacterized protein LOC105124874 isoform X1 [Populus euphratica])

HSP 1 Score: 133.7 bits (335), Expect = 2.8e-28
Identity = 77/156 (49.36%), Postives = 103/156 (66.03%), Query Frame = 1


Query: 2   SPDKPGEDAGVSGFEPEETEPDSE-LEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE 61
           SP+KP      S FE E  E ++E LE+LE +V+QMA++IL YR+TL  Q+K++   LL 
Sbjct: 12  SPEKPE-----SKFEDESEEEEAEELEQLETQVKQMAKKILEYRATLPDQLKTTLALLLS 71

Query: 62  SSRPLA----IASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNT 121
           S RPL       S+PG S   + +   Q        L +E  +TA+K+ L+K+KISSN +
Sbjct: 72  SQRPLLPDCDSGSDPGPSGELNPDSGGQDKSSRAALLTKEDRKTAEKVHLLKEKISSNVS 131

Query: 122 MIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS 153
            +P VLKRMKDCIS I+KLDSYNG IHPAFK+K+TS
Sbjct: 132 TMPVVLKRMKDCISRINKLDSYNGSIHPAFKKKRTS 162

[Close]

BLAST of Cucsa.258320 vs. NCBI nr
Match: gi|224127660|ref|XP_002320129.1| (hypothetical protein POPTR_0014s07880g [Populus trichocarpa])

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27
Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 1


Query: 13  SGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLESSRPLA----IA 72
           S FE EE E + +LE+LE EV+QMA++IL YR+TL  Q+K++  SLL S RP+       
Sbjct: 18  SRFEEEEEEVE-KLEKLETEVKQMAKKILEYRTTLPDQLKTTVASLLSSQRPVLRHFDSG 77

Query: 73  SEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPTVLKRMKDC 132
           S+PG S   + +   Q T      L EE  +TA+K  L+K+KISSN + +P VLKRM+DC
Sbjct: 78  SDPGSSGELNPDSGGQDTSSRAALLTEEDRKTAEKTHLLKEKISSNVSAMPVVLKRMEDC 137

Query: 133 ISTIDKLDSYNGVIHPAFKRKKTS 153
           IS IDKL SYNG IHPAFK+K+TS
Sbjct: 138 ISKIDKLYSYNGSIHPAFKKKRTS 160

The following BLAST results are available for this feature:

BLAST of Cucsa.258320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8X5_CUCSA	2.4e-79	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122450 PE=4 SV=1	[more]
B9I8I5_POPTR	7.5e-28	52.08	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07880g PE=4 SV=1	[more]
B9GQ90_POPTR	8.3e-27	48.41	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16050g PE=4 SV=1	[more]
A0A067HDZ7_CITSI	2.4e-26	47.74	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031490mg PE=4 SV=1	[more]
F6GVE2_VITVI	3.1e-26	47.59	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00850 PE=4 SV=...	[more]

BLAST of Cucsa.258320 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00525.1	2.6e-16	39.42	unknown protein	[more]

BLAST of Cucsa.258320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432158\|ref\|XP_004133867.1\|	3.5e-79	100.00	PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus]	[more]
gi\|659075272\|ref\|XP_008438056.1\|	2.1e-71	94.00	PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo]	[more]
gi\|743789357\|ref\|XP_011036139.1\|	3.3e-29	51.61	PREDICTED: uncharacterized protein LOC105133741 isoform X1 [Populus euphratica]	[more]
gi\|743828764\|ref\|XP_011023349.1\|	2.8e-28	49.36	PREDICTED: uncharacterized protein LOC105124874 isoform X1 [Populus euphratica]	[more]
gi\|224127660\|ref\|XP_002320129.1\|	1.1e-27	52.08	hypothetical protein POPTR_0014s07880g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.258320.1	Cucsa.258320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 26..46 scor
None	No IPR available	PANTHER	PTHR36045	FAMILY NOT NAMED	coord: 16..152 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.258320	Cla021241	Watermelon (97103) v1	cgywmB479
Cucsa.258320	Csa3G122450	Cucumber (Chinese Long) v2	cgycuB366
Cucsa.258320	MELO3C006115	Melon (DHL92) v3.5.1	cgymeB439
Cucsa.258320	ClCG05G001580	Watermelon (Charleston Gray)	cgywcgB451
Cucsa.258320	CSPI03G08830	Wild cucumber (PI 183967)	cgycpiB383
Cucsa.258320	CmaCh14G020340	Cucurbita maxima (Rimu)	cgycmaB0709
Cucsa.258320	CmaCh06G010630	Cucurbita maxima (Rimu)	cgycmaB0723
Cucsa.258320	CmoCh06G010840	Cucurbita moschata (Rifu)	cgycmoB0717
Cucsa.258320	Lsi05G020340	Bottle gourd (USVL1VR-Ls)	cgylsiB415
Cucsa.258320	Cp4.1LG08g01160	Cucurbita pepo (Zucchini)	cgycpeB0688
Cucsa.258320	MELO3C006115.2	Melon (DHL92) v3.6.1	cgymedB432
Cucsa.258320	CsaV3_3G008970	Cucumber (Chinese Long) v3	cgycucB387
Cucsa.258320	Cla97C05G081970	Watermelon (97103) v2	cgywmbB452
Cucsa.258320	Bhi01G000260	Wax gourd	cgywgoB524
Cucsa.258320	Carg24641	Silver-seed gourd	carcgyB0447
Cucsa.258320	Carg21006	Silver-seed gourd	carcgyB0564

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.258320	Melon (DHL92) v3.6.1	cgymedB431
Cucsa.258320	Cucurbita maxima (Rimu)	cgycmaB0727
Cucsa.258320	Cucurbita moschata (Rifu)	cgycmoB0700
Cucsa.258320	Cucurbita moschata (Rifu)	cgycmoB0718
Cucsa.258320	Wild cucumber (PI 183967)	cgycpiB382
Cucsa.258320	Melon (DHL92) v3.5.1	cgymeB438
Cucsa.258320	Watermelon (Charleston Gray)	cgywcgB449
Cucsa.258320	Watermelon (97103) v1	cgywmB477
Cucsa.258320	Cucurbita pepo (Zucchini)	cgycpeB0682
Cucsa.258320	Cucurbita pepo (Zucchini)	cgycpeB0687