Cp4.1LG03g16860.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCACCGAACGATCCCAAATATCCCTATATAAACCGGAAGCGGTTTATATAGCGAACAAGCGGAAACGCGATTTCTTCTCCGTCGAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACCGCCGACTATGGCCCTCAACCCAATTTTCTCGATCCTGTGAGTTCTCTAAGCATCTCTCCCTCAAATTTTTTATTATCTCTCTGGTTCGAAGCAGTAGGATCTTGGATCTTATGTAGGTTAGTTTCTTTTTACTATTCAGCAACCCAGGGATTTTTATCGTGTCATTGACGCGGATTTGTTGGTGTTCTTTTGTCTGTATTTTTCTGATGTGATTTCTGTTTGTCTATTATGGATTCCGTTATCTAGACATTGATGAACTTCCTCTTATCTGTATTCTTTTCAAGCGAAAAATGAATTGCGTTTGCAGTGACTTCGTTTCTTAATCAATTTTTCTTTTTATGCAACTCGTATAGTGTAGTTCAAGCTCTTGGATTTCCAATCATATTTACTCGCTTATTGTTCTTAATTTTTGTTGCCAGTGTATCAGTTGTCGTATATTTCGCCTTGTACTTGATTTAACGTGTAGAACCTAGGTTTTCTACATTCTTCGTCGGTCTTGTTTTCCTTGCTAAATTTACCATTGTTTAACACGATTTATGTTTAGTTTATGAAATTTTCATCCATTGTGTTATAAATTTGTTGAGGCTTTAACATTTCAATGCACTGAGTTTAAATTAGATGGAAAATTTCCTTCCAATACGTTGTCAAATTGCTGAGAGTGAACATATACGTTCATCTGATCTCTTACAACAATCTGAAGTTTGTAGGTTTATGAGTTGCTAATTACCATTTGTTCTTGTTTTTGAGTCATCAATTTCAATGAAATTTATACCTTGCTAGATTTGTCTGTCGCTCATAATTTCTTGATAGTGAAGTGAGATATGAAAACTAAGAGTAAAGAGTGAAGTTTCCCTTTCTATTCAGTTAGAAGCAAGAAGACTTGGCATTTAGCATATTAATAACATAAGTTTAGGTGACAATTAACATGGTTTTACTTCTACATATTAACAACTGGAAGGCATTAGACATTTCAGTTCTTTGCCATAACAATAACTTATTGATCTACCAGTGTTCGATCGAATTTTCAGATGTCTAGAAGATTGTTCATATTGTTCTGAGTTCTAATGGCCTAATTTGGAATGGCAGATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGGTGTCAAGGACAATCCATGATGCGTAGACTCGAGGATTTGGTTACGGTTTTATGCATACATATCTTGAATCTGCAGTTTTTGTTTATACATTTCGTGAAGCGTAGGTCGAGATCAAGCATGAGTAGACCTCTTGGAGGAGACGAATAATGCAGTTTGTTAGATTCTAAGGTGTTGAATGAGTTTGTTATTACCAACTTCATTTAGCATCTTAACCTCAAGAGATTCAAAATACTTTGCATATTTTGGAATTGCTATGATATCATATCAAGTGGTTCTGAACTCCTGTAGAAAAAATGAACATTGCTCTGATTTAGGAACTTTAGAAGTGAAATGTGGTTCTGTGCTGGAATGGTGAGTCAGCCCGAGCCCACGGGAACGTGCTTTAAAACCGTGAGGCTGACGTCTATACGTCACGGGCCAAAGTGGACAATGTTTGTTAGCGTTGGGTTTGGGCTATTACAATTTTCTTATCCTATACAGAATGAAAGGAATCCAATGATGCTTTCCCAAGAACAATGAAGTTGCTATTTTTGCTTTGAACGAAAGGAGAATAGAGGTATTAAGAAAATGGATTTTTCGACGATCTAAAACTTCAATCCCTTTTGAGGGCCAAATACCTTTGATCGTGTCGGTGTCAAAGAAAAATGAAAAAAAAAAAAAAAATTCAATTCAAAATTAGTTAATAAATAATGTTAGGTGGGCCTATGATTGGGCCGATGGGCCTATTGGTTTACATTCAAGTTTCATCAATCGGGCTTCGAGACCCGACTGGTTGAAGCGCGGGCTGTGCACTTCTCTTCTAATCGATTTCACAATCCCATTCCATTTCCATGTCGAACTCTCAAACTTCAAAATCCATTGCGCTCCAAAATCCCAAGATTAGCATTCCATTCGATTCCAACACACAACTGAATTTCGTCTCTCCCTCTGATCTTCCACTCCTACTTCTCTAGAAACTGTCGTGGTTTCAAAACCGAACATGTCCCCAGACAATCCCGGTGAAGACGCCGGTGTTTCTGGATTTGAATCCCAAGAAACGGAGCCTCACTATGAGGTTGAAGAGCTGGAGCTTGAAGTGAATCAAATAGCTCAGAGGATTCATCACTACAGATCCTCTCTGTCGGCTCAGCTAAAGTCCTCCTTTTCGTTACTCGAGTCCTCGAGGCCTCTCCCCATTGGAGCCTCGCACCTGGAAACATCTGCTTCTCGTCCGGATCATGAAGGTCGGATTCTGTGCCTCTAATTTTATTTAGTTGCTTCACGTTTTTCTTTCTTTCTTGCTTGGAACTGGTAGATTTACTGACTGAGAAAATGAAGTGAAAGTTTCTTTGTTTTGAATACACATTTAGAAGTGTTAAATTGGGGCGAGTGGAATGCATGTTGTTCTGAATTATTTGATAGAAGGTTTCTTTTGGCTATTGAACAAGGCAACATTATGTAACCAGCGAAGGCTTCTGCCTAACCAAACTGTCTTTCTGTTTCATTTCCTTCTCTGTTCTTCCTGTAAATTGCATTGGGTGAAGGCTTCTGTTCTTTTGTTGGTTGTAGTTTATAAAGTATGATATTTGTTGATTGTTCGTTTAAGTTCTTAAGAATATTTGATGATATTTTTATATGTTTAATTTATGATCTATGTTCAAGTGAGTTTAGTTCTCAAAAGTGAGCATAGCTCAACAGTTCTCGACATGCATTTCTTCTCAAAATTTTAGAATCAAATTCTCATCCCCACTTGTTATACTAAAACAATGAGTGAGTTTAGTTAGACGGTAACTCCTCACTACTTTTGAAGCTTTTAGGCCATTTGGGAAAGCACACCATTAAATCGAGCTAGTTTTTCACTATGTAGGCTGTTCTTGCTGTTTGGGGGTGAGTCTATCATCCTCAGGGGGTAATTCTTTCAGTAACAATCATTCTAATGCAGCTGTTGCATCACAAGTTAAAAAAGAAATACATAATTCTTGCTTTAAGCCAAGGGTGTTAGGCAGTCCTATGGGAGCTCTGAGTTGAAAGAAATTCTAGGATTTTACTAGATGATCTTTTTGGTATACACTTTTTGTATTTTTGTTGATTCGGGTCATTTTTTGCAATAATAGATGATGCATATTTCGATCGATTATGCCAACCTATTATCGAGCAAGTATTAACTTTTTGGACTTGTAAGTGAGCTTATTGTATGGCAATGAAGCATTATTTCCTACAAACTTGTATTCTGATTGAGAAATCACTCTGTTTATGCAGATGATGAACAAACCACCACAAGAGGTGAAGGCACAGTTCATGAAGAGGGATTAGAAACTGCGAAGAAGATACAGTTGCTTGAAGATAAAATATCAAGTAATATCATCCTGATCCCTACAGTTCTTAAGAGGATGAAAGACTGTATTTCAACTATTGACAATTTGGCTTCTTATAATGGGGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGAATTTAACTCGTACCTGGCTGTTACTTTACAAGCAATTCTCGAGGGTAGTACGGTTATCGAGTTAGACGTGTAGTGTATTGATCTTTACATTCTGTTGTCGAAAGGGCTGATTTCTCAACCATTTGCTTCCTGGTATGTAACATAACCTCCTGTCTATAACGTTATTGAAGACAATAGTTTTCCATCTGTTGCTGTATAAAGTTCTTGAAATATTGAAATAGGAAGTTTTATGCCTATTCCTTCAGCTTCTCTAAAGTTTTACTCCTATTTGTTTCACACGACACAGCTTGCAATTATCGATATCATTCACGAACCTAAAAAATGTAACTTTCCTGCGATTATAATGATAGGAACAAGAACTTGTATATATTGATAAGAGAACATTAACAAAGAGTATCAATTCTCCAATATTTCATTGAAAGAGTATATACATTATGGTATTGCATAAGGGCAAGTTTGTCTATCAGGTGGAGGCAGCTTAAATTGTTACACATTTACAGGAAAGTACATCAACATCAGAATCTAATCTTGGTATAGAGGAACTCACCATCAACCCTTCCATAGTCCTTGCGTTGTCCACATTAAAGATGACGCTGCTGAGTCCCTTCCCCACGACGACGATTCTTTTCCCGACAGCGACGAGTTGACATGGCGGTCTCGTTAGAAGGGCAGAAAATCTCCCCACTGGAATCCATTCCTTGACTTCATTGTTCCACATCATCAATCTGGTTCCAGAACTTTGATCCAAAACATAAAGAGTTTTGTCTACAATAACCGCTGGACCTCGCCATCCCGAAACCATTTCTGAGTCACTGTGCTCCCACGTTCCACTCGATGGGTCGTAAACCAGAGCATAAGCTTGAGAGTCCACAGAACGTTGACGGATATAAATCTTTCCATCCATCACAATCGAACCTTCAATTTCGTTCGGAATATTTGTAATGTCCAAGCAAGGTTCCCATTTGTTGGTGCATGGGTCATATATGTCCCAAGAATGTCGATCACCTGAATTGGAACATAAGCCCCCAATGGCATAAAGCTTTTCATTTAAGACTTCACAAGCAAAGTAGCA ACCACCGAACGATCCCAAATATCCCTATATAAACCGGAAGCGGTTTATATAGCGAACAAGCGGAAACGCGATTTCTTCTCCGTCGAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACCGCCGACTATGGCCCTCAACCCAATTTTCTCGATCCTATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGATGATGAACAAACCACCACAAGAGGTGAAGGCACAGTTCATGAAGAGGGATTAGAAACTGCGAAGAAGATACAGTTGCTTGAAGATAAAATATCAAGTAATATCATCCTGATCCCTACAGTTCTTAAGAGGATGAAAGACTGTATTTCAACTATTGACAATTTGGCTTCTTATAATGGGGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGAATTTAACTCGTACCTGGCTGTTACTTTACAAGCAATTCTCGAGGGTAGTACGGTTATCGAGTTAGACGTGTAGTGTATTGATCTTTACATTCTGTTGTCGAAAGGGCTGATTTCTCAACCATTTGCTTCCTGGTATGTAACATAACCTCCTGTCTATAACGTTATTGAAGACAATAGTTTTCCATCTGTTGCTGTATAAAGTTCTTGAAATATTGAAATAGGAAGTTTTATGCCTATTCCTTCAGCTTCTCTAAAGTTTTACTCCTATTTGTTTCACACGACACAGCTTGCAATTATCGATATCATTCACGAACCTAAAAAATGTAACTTTCCTGCGATTATAATGATAGGAACAAGAACTTGTATATATTGATAAGAGAACATTAACAAAGAGTATCAATTCTCCAATATTTCATTGAAAGAGTATATACATTATGGTATTGCATAAGGGCAAGTTTGTCTATCAGGTGGAGGCAGCTTAAATTGTTACACATTTACAGGAAAGTACATCAACATCAGAATCTAATCTTGGTATAGAGGAACTCACCATCAACCCTTCCATAGTCCTTGCGTTGTCCACATTAAAGATGACGCTGCTGAGTCCCTTCCCCACGACGACGATTCTTTTCCCGACAGCGACGAGTTGACATGGCGGTCTCGTTAGAAGGGCAGAAAATCTCCCCACTGGAATCCATTCCTTGACTTCATTGTTCCACATCATCAATCTGGTTCCAGAACTTTGATCCAAAACATAAAGAGTTTTGTCTACAATAACCGCTGGACCTCGCCATCCCGAAACCATTTCTGAGTCACTGTGCTCCCACGTTCCACTCGATGGGTCGTAAACCAGAGCATAAGCTTGAGAGTCCACAGAACGTTGACGGATATAAATCTTTCCATCCATCACAATCGAACCTTCAATTTCGTTCGGAATATTTGTAATGTCCAAGCAAGGTTCCCATTTGTTGGTGCATGGGTCATATATGTCCCAAGAATGTCGATCACCTGAATTGGAACATAAGCCCCCAATGGCATAAAGCTTTTCATTTAAGACTTCACAAGCAAAGTAGCA ACCACCGAACGATCCCAAATATCCCTATATAAACCGGAAGCGGTTTATATAGCGAACAAGCGGAAACGCGATTTCTTCTCCGTCGAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACCGCCGACTATGGCCCTCAACCCAATTTTCTCGATCCTATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGATGATGAACAAACCACCACAAGAGGTGAAGGCACAGTTCATGAAGAGGGATTAGAAACTGCGAAGAAGATACAGTTGCTTGAAGATAAAATATCAAGTAATATCATCCTGATCCCTACAGTTCTTAAGAGGATGAAAGACTGTATTTCAACTATTGACAATTTGGCTTCTTATAATGGGGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGA TTERSQISLYKPEAVYIANKRKRDFFSVEMVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNDDEQTTTRGEGTVHEEGLETAKKIQLLEDKISSNIILIPTVLKRMKDCISTIDNLASYNGVIHPAFKRKKTS
BLAST of Cp4.1LG03g16860.1 vs. TrEMBL
Match: A0A0A0L7H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122460 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.5e-27 Identity = 66/73 (90.41%), Postives = 67/73 (91.78%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. TrEMBL
Match: A0A0A0L8X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122450 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 8.2e-23 Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. TrEMBL
Match: A0A059CJG1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02283 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19 Identity = 50/77 (64.94%), Postives = 65/77 (84.42%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. TrEMBL
Match: A0A0S3SYV2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G152600 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 5.5e-19 Identity = 52/78 (66.67%), Postives = 64/78 (82.05%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. TrEMBL
Match: A0A151UCK2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_021322 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 9.4e-19 Identity = 50/77 (64.94%), Postives = 63/77 (81.82%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. TAIR10
Match: AT4G00530.1 (AT4G00530.1 unknown protein) HSP 1 Score: 87.8 bits (216), Expect = 7.1e-18 Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. TAIR10
Match: AT1G01725.1 (AT1G01725.1 unknown protein) HSP 1 Score: 72.4 bits (176), Expect = 3.1e-13 Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. TAIR10
Match: AT4G00525.1 (AT4G00525.1 unknown protein) HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06 Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. NCBI nr
Match: gi|659075274|ref|XP_008438057.1| (PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo]) HSP 1 Score: 129.4 bits (324), Expect = 6.0e-27 Identity = 66/73 (90.41%), Postives = 67/73 (91.78%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. NCBI nr
Match: gi|778677234|ref|XP_011650756.1| (PREDICTED: uncharacterized protein LOC105434815 [Cucumis sativus]) HSP 1 Score: 129.0 bits (323), Expect = 7.9e-27 Identity = 66/73 (90.41%), Postives = 67/73 (91.78%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. NCBI nr
Match: gi|449432158|ref|XP_004133867.1| (PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus]) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22 Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. NCBI nr
Match: gi|659075272|ref|XP_008438056.1| (PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo]) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22 Identity = 58/72 (80.56%), Postives = 66/72 (91.67%), Query Frame = 1
BLAST of Cp4.1LG03g16860.1 vs. NCBI nr
Match: gi|1009172618|ref|XP_015867370.1| (PREDICTED: uncharacterized protein LOC107404888 [Ziziphus jujuba]) HSP 1 Score: 113.6 bits (283), Expect = 3.4e-22 Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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