CmaCh06G010190 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGCTTCATCATTTAATAGGCTTGGCGGGTGCCCAATCAAGCTTTAAGACCCGCCTGGTCGGCTCGGGCTGCACGCCCTCTCTCTCTCTCTCTCTTCTCTTGCAGTCGATTTCACACGTTGAACATTCAAATTTCGAAATCCATTGCCCTCCGAAATCCCAAGATTCGCATTCGTTTCGAACACACAACTGAATTTCGTTGCTCTGATCTTCCAATCCTATTTCTGTAGAAACTGGCTGTGGATGTAAACTGAAACATGTCCTTCGACAAACCCGGTGAAGACACCGGGGTTTCTGGATTTGAATCCGAAGAAATGGAGCCCGATTCTGAGCATGAGGAGCTCGAGCTTGAAGTAAACCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTCTCTGCTCAACTAAAGTCCTCCTTCATTTCGTTACTCGAGTCCGCGAGGCCTGTTGCCTTCGGAGCCTCGGAGCCGGGAATATCTGTTCCTCCGAACCATGAAGGTGGGTTGTGTTTTCTTTCTTTCTCCGAACTTGTAGATTTTCTCTGTGAAAATGAATTGAAAGAAATCTGAAATTATGCTGTTCTATTAGGTATATGCTTCTTTGAAGTGAATGAGTTTGCTGTTTGGGAATTCTGTGCCAAGGGGTTGGTTTCTAAACGCTTTTTGAAGTGTTTAATTAGGGCGAATGGAATACAATTAGTTCTAATTTTTTTGATCTGGAATTGCTACCTGTTCTTCTCACTGATTTGATTTGCAATTCTGGTTCAGGATGGGGGGATTAAGTTCAAATACTCCTATTTTGTTGGCTTTTGAGCTAAATTTATGTATCCAACGGCAGTTTTTGAGCATGCCTTTCTGGAGCATTCAGCTTAAGATGTAGAATGACTATTTTAGGACTAGTGAACTGTAGTGAACTGTTTCAGTGTGCAATATTTTTTAAGTACTTAGAAAGTCATTTCAATTGGGTCTTTCATTTATCGATTTCATCGTATATGAGAAGCTCGTTGATATAATTATATTTCATTTTTTTGTTCAGTTTTTCTTGTTCTTTTCCTGTAGTGTTCCAAACTGTATTTCTGTTTCATTTCCTTCTGTCTTGTCCTTCTGTTGGTTGCAGTTTTTAAAATTGTTGACAATTGCAAAAAAATTGTTGATTGTGATGATACTTCAATGTGTTACGTTTACAATCTATGTTTCAAGTGAGTTTAGTAAGGCTGCTCATCACTACTTGTGGATCTTTTTGGCCAATTCTGAAAATTACACAAAGTGTTTCACTAGGTAGGTTGTTCTTGCTGTTTCGGGGTGAGTGTATCGACTTTAGTAGTTATTCCTTTCGGTAGCAAATATTCTAATGCAGCTATTGTATCACAATTTGAAAAACAAAGTCAAAGTTCTTACTCTAAGCTAACGAATTTCGGCTGTCCTATGATAGCTCCGAGTCAGAGAATTCTAGGACTTTTCAAGACAAGGATTTAGCCAGATGGTTAGCTTTTTCGTGTACCCTTAATCTTATTATTTTTGTGACTCTAGTGCCTCTTGTATTTATGTTGATCGAGGTCCTTTTTTTCGTGAAATAGCTTTTAGCTTTTAGGGTGGATTGCTCATTCCCCTGCTTTTGTGTTCCTTTTGATTCTCTATTTCAATGGTCTGCAGAAGTCTTTATGCCATCTCTACTTTAGTTATATTATATTTATGGTTCGTGAGCGCTTCGATAATTCGTGCATGTTCTGATTGATTACGCCAACCTACGATCTTTTTCAAAAAGCAAATATTAACCTTTTGGACTCAATCGTGAGTTTACTCCAAGGATGTACTTGTGTGACAATGTTAGTGTGTCTGGTGGTAATGAAGAGTTATTCTGATGATACATATAGGATTTATATACTCAGTTGTACGGTCTGACTGACAAATCATTTTGTTATGCAGATGATGAACAACAAATCACAAGAGGTGAAGGAACGGTCCTTCATGACGAGGGTTTAGAAACAGAAAAGAAGATACAATTGCTCAAAGATAAAATATCAAGTAATATCTCTATGATTCCTGCAGTTCTGAAGAGGATGAAGGACTGTATTTCAACTATTGACAATTTGGATTCTTATAATGGGTCCATTCATCCTGCATTCAAAAGGAGAAAAGCTAGCTGAATTTCACTACTGGTATGCCTACTAGTTACTTTTGTGGCAAATTACTTTACAAGGGGATCTTGAGTGCAATACAATTATTTAGTTAGAGGTGTACCCGCCGCGCTTACTGACTCTTTATCCCGACCCAACTAGCTCTAACTCCAATTCTTCCCTTTATATTCTTCGGTAAGTGGACCGAGGAAGCATGGGAGATATCTGCTTTTGACTGATAAAAAACATCTCGCCTTACATCGTGTTGGTGTGAAAGTAGTTTATTTCTTTACAATTGCAATGCTGATATGTAACATAACATATTGTGTATAACGTTATTGAAGACATTAGTTTTGCTTTTGTTGATGTATAATATTCTTGAAAAATGTTGAACTAGGAGGTTTTTCTTCTATTCCTTCAA AAGCTTCATCATTTAATAGGCTTGGCGGGTGCCCAATCAAGCTTTAAGACCCGCCTGGTCGGCTCGGGCTGCACGCCCTCTCTCTCTCTCTCTCTTCTCTTGCAGTCGATTTCACACGTTGAACATTCAAATTTCGAAATCCATTGCCCTCCGAAATCCCAAGATTCGCATTCGTTTCGAACACACAACTGAATTTCGTTGCTCTGATCTTCCAATCCTATTTCTGTAGAAACTGGCTGTGGATGTAAACTGAAACATGTCCTTCGACAAACCCGGTGAAGACACCGGGGTTTCTGGATTTGAATCCGAAGAAATGGAGCCCGATTCTGAGCATGAGGAGCTCGAGCTTGAAGTAAACCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTCTCTGCTCAACTAAAGTCCTCCTTCATTTCGTTACTCGAGTCCGCGAGGCCTGTTGCCTTCGGAGCCTCGGAGCCGGGAATATCTGTTCCTCCGAACCATGAAGATGATGAACAACAAATCACAAGAGGTGAAGGAACGGTCCTTCATGACGAGGGTTTAGAAACAGAAAAGAAGATACAATTGCTCAAAGATAAAATATCAAGTAATATCTCTATGATTCCTGCAGTTCTGAAGAGGATGAAGGACTGTATTTCAACTATTGACAATTTGGATTCTTATAATGGGTCCATTCATCCTGCATTCAAAAGGAGAAAAGCTAGCTGAATTTCACTACTGGTATGCCTACTAGTTACTTTTGTGGCAAATTACTTTACAAGGGGATCTTGAGTGCAATACAATTATTTAGTTAGAGGTGTACCCGCCGCGCTTACTGACTCTTTATCCCGACCCAACTAGCTCTAACTCCAATTCTTCCCTTTATATTCTTCGGTAAGTGGACCGAGGAAGCATGGGAGATATCTGCTTTTGACTGATAAAAAACATCTCGCCTTACATCGTGTTGGTGTGAAAGTAGTTTATTTCTTTACAATTGCAATGCTGATATGTAACATAACATATTGTGTATAACGTTATTGAAGACATTAGTTTTGCTTTTGTTGATGTATAATATTCTTGAAAAATGTTGAACTAGGAGGTTTTTCTTCTATTCCTTCAA ATGTCCTTCGACAAACCCGGTGAAGACACCGGGGTTTCTGGATTTGAATCCGAAGAAATGGAGCCCGATTCTGAGCATGAGGAGCTCGAGCTTGAAGTAAACCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTCTCTGCTCAACTAAAGTCCTCCTTCATTTCGTTACTCGAGTCCGCGAGGCCTGTTGCCTTCGGAGCCTCGGAGCCGGGAATATCTGTTCCTCCGAACCATGAAGATGATGAACAACAAATCACAAGAGGTGAAGGAACGGTCCTTCATGACGAGGGTTTAGAAACAGAAAAGAAGATACAATTGCTCAAAGATAAAATATCAAGTAATATCTCTATGATTCCTGCAGTTCTGAAGAGGATGAAGGACTGTATTTCAACTATTGACAATTTGGATTCTTATAATGGGTCCATTCATCCTGCATTCAAAAGGAGAAAAGCTAGCTGA MSFDKPGEDTGVSGFESEEMEPDSEHEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGASEPGISVPPNHEDDEQQITRGEGTVLHDEGLETEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
BLAST of CmaCh06G010190 vs. TrEMBL
Match: A0A0A0L8X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122450 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 5.9e-57 Identity = 125/154 (81.17%), Postives = 133/154 (86.36%), Query Frame = 1
BLAST of CmaCh06G010190 vs. TrEMBL
Match: B9I8I5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07880g PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.3e-24 Identity = 76/145 (52.41%), Postives = 96/145 (66.21%), Query Frame = 1
BLAST of CmaCh06G010190 vs. TrEMBL
Match: F6GVE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00850 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.9e-23 Identity = 68/146 (46.58%), Postives = 92/146 (63.01%), Query Frame = 1
BLAST of CmaCh06G010190 vs. TrEMBL
Match: B9GQ90_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16050g PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.3e-23 Identity = 69/140 (49.29%), Postives = 90/140 (64.29%), Query Frame = 1
BLAST of CmaCh06G010190 vs. TrEMBL
Match: V4VY04_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022632mg PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 5.6e-23 Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 1
BLAST of CmaCh06G010190 vs. TAIR10
Match: AT4G00525.1 (AT4G00525.1 unknown protein) HSP 1 Score: 72.4 bits (176), Expect = 2.7e-13 Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 1
BLAST of CmaCh06G010190 vs. NCBI nr
Match: gi|659075272|ref|XP_008438056.1| (PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo]) HSP 1 Score: 228.8 bits (582), Expect = 6.5e-57 Identity = 123/152 (80.92%), Postives = 133/152 (87.50%), Query Frame = 1
BLAST of CmaCh06G010190 vs. NCBI nr
Match: gi|449432158|ref|XP_004133867.1| (PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus]) HSP 1 Score: 228.4 bits (581), Expect = 8.5e-57 Identity = 125/154 (81.17%), Postives = 133/154 (86.36%), Query Frame = 1
BLAST of CmaCh06G010190 vs. NCBI nr
Match: gi|743789357|ref|XP_011036139.1| (PREDICTED: uncharacterized protein LOC105133741 isoform X1 [Populus euphratica]) HSP 1 Score: 124.0 bits (310), Expect = 2.2e-25 Identity = 78/145 (53.79%), Postives = 97/145 (66.90%), Query Frame = 1
BLAST of CmaCh06G010190 vs. NCBI nr
Match: gi|224127660|ref|XP_002320129.1| (hypothetical protein POPTR_0014s07880g [Populus trichocarpa]) HSP 1 Score: 120.2 bits (300), Expect = 3.2e-24 Identity = 76/145 (52.41%), Postives = 96/145 (66.21%), Query Frame = 1
BLAST of CmaCh06G010190 vs. NCBI nr
Match: gi|743828764|ref|XP_011023349.1| (PREDICTED: uncharacterized protein LOC105124874 isoform X1 [Populus euphratica]) HSP 1 Score: 119.0 bits (297), Expect = 7.2e-24 Identity = 73/146 (50.00%), Postives = 95/146 (65.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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