Lsi05G020330 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAACCGGGGCGGCGAAACACGATTTCTTCTCCGTCGAAGCAGTTAATTTCGAAATTGAGAGGTGGAATTGATAGAGGGAACAGAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCCTACTTTCTCTTAACCGCCGATTATGGCCCTCAACCCAATTTTCTCGATCCCGTGAGTACTCTAAACATCTCTCCCTTAAAAAATTTATTATCTGTTTGGTCGCCGAGAAAATCCATGGAAAAAGCACTAGGATCTTAGATTTTCAGTACGCCAGTTTCTTTTTACTATTCAGCAACCTAGGGATTGTTATTGTGCAATGTAACTCAGATTTGTTTGTAGAGTTTATTTGTGTGTGTTGTTTTTTCCACTGTGTTTTCGTTTATCTAGGCATTGATGAACTTCCTCTTATCTATATTCTTTTCAAGTGAAAATTGAATTTCGTTTGCAGTGGCTTCGTTTTTTGATCGATTTTCTTTTTATGCAAGTCGTGTAGTGTAGTTCAAGCTTTGTGGCTTTTGGATTTCCAGTCGTATTTTATTCAGTTATTGTTGTTAATTTTTGTTGACACTTGACAGTGTATAAGTCATTGTATATTTCGCCTTGCACTTGATTTTAGTGTGTAGAACCTAGGTTTTTCTAAATTCTTCATCGGTCCCGTTTTCCTCGCTAAATTGACAATTGTTTGACACGATATGTGTTTAGTTTATGATAATTTCATCTATCGTGTTGCAAATTTTTTGAGGCTTTAACTCTTCATTACATTGAGCTTTGATTAGATGAAAAAATTTCCTTCCAGTACCTTATCAAATTGAACAGAAAAAATGTATACGTTCATCTAATCTAGAATAAGAATAATCTGTACCTTGTGGTTTCATGAGTTGCTAATTACTATTTGTTATTTTGTTCGATTTTTGAGTCATCACTTTCAATGAAGCTTATGTCTTGCTAGATTTGTCTGTTGCTGATAATTTCTTGCTATTGCAGTGAGGTATGATAACTAAGAGTAAAGAGTGAAGTTTCCCTTTCTATTACAGTCAGAAGCAAGAAAACTTAGCATTTAACAAATTAATAATACAAGTTGAATTGAGAAGTCATTATGGTTTGCTTCTACATATAATTAACAACCGGAAACCATTGGATATTTCAGTTATTCACTACATAGGAAATCTTATGCTGTGATGGATTATTATGCATAAAATAATTATAATTTAAGCCCTGTTTGATTACTTTTTGGTTCTTGTTTTTGTTCTTTTGAAAATTAAGCCTGCCTATAAACATCACATCCATCTATTAGTTTATATGTTTTGTGATCTAGATTTTATGAGTGTTTTCAAAGTCAAAAACATATTTTGAAAAAAAAATAACAAAGTTTTCAAAAACTTGTTTTTGTTTTTGAAGATTGGCTAAGAATTCAAATGTTTATATAGGAAATATAAAAACAATGAGTAACAACTTGTGAGAAAACAACACAATTGTCAAAAATAAAAAAAAACAAAATGGTTACTAAATGGGAGTTTAGTGATCTATGGATTTTTATATGCTTGATTGGTGTTTGATCAAATTTTCAGATGTCTAGAAGATTGTACATATCGTTTTCAATTCTAATGGCTTACTTTGGGAATGGCAGATCAAAAAGTTTATACTGTCAGCAGAAAGTTCTATTAAGGGTTTCATCTTTGGACCAAATAATCAATCTCAAGAAAGTCGAAGAGAGAAGCTCGGCTCCAATGGTGTCAAGGACAATCCATGATAAGTAGACTTCAAGGATTTCGTTACGACTTTATGTATATATATCTTGAATCTACAGTTTTTTATTATACATTTCCTAAAGCTTAGTTTGAGATCAAGCATGAGTAAACCTTTTGGAGGAATCAAATAATGAAGTTTGTTTAGATTATAAGATGTTTAATGAATTGGTTATTACCAAATCCATTTAGCATATTAACCTCAGAGATTCAAATTACTTCCAGCATATTTCTGGATTGGTGTAGGTTCATTTTTTTTTCTTTTATTATCTGATAAGGCATGATATCTGTTAGGAGCCAAAGGTAGTATGGGCTACCTTTATCCCATATTGGTTAGAATGGGATGACCAATGTGGTACTCAAGTGGCTTAGCTCTCTCACTTCAATAGCTAGCTTTTGGGGTGTGGTTCTCCAAGGTGCTTAAGTACCTAACAATGGTATCAGAGCCGGTTGTTGACATTCTAGAGTGGAACTGGCGGACGGTTCTGACCGGGTGTGGCTGAGTGAAGTATCGTTGGAGTAGCCGCTGGGACGTCGGCTTTCCGGAGATGGGGTATTGTTAGGAACCAAGGTAGTATGGGCTACCTTTGTCCCACATTGGTTAGAATGGGATGACCAATGTGGTACTTAAGTGGCTTGGCTCTCCCACCTCAATAGCTAGCTTTTGGGGTGTGGTTCTCTAAGGTGCTTAAGTACTTAACAATATCATATCAAGTGGTTCATGAGAGACCACTCTTAGTTATTTTAAACTCCTGTAAAATATGAAGATAATTAGATTAGCTGTAGTTCTTGTAAATTCTTGTAAAGAATGAACATTCTTCTGATTTGGGAGTTTTAGTGAAATGTTATTTTGTGCTG AAAAAAAAAAAAAAAACCGGGGCGGCGAAACACGATTTCTTCTCCGTCGAAGCAGTTAATTTCGAAATTGAGAGGTGGAATTGATAGAGGGAACAGAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCCTACTTTCTCTTAACCGCCGATTATGGCCCTCAACCCAATTTTCTCGATCCCATCAAAAAGTTTATACTGTCAGCAGAAAGTTCTATTAAGGGTTTCATCTTTGGACCAAATAATCAATCTCAAGAAAGTCGAAGAGAGAAGCTCGGCTCCAATGGTGTCAAGGACAATCCATGATAAGTAGACTTCAAGGATTTCGTTACGACTTTATGTATATATATCTTGAATCTACAGTTTTTTATTATACATTTCCTAAAGCTTAGTTTGAGATCAAGCATGAGTAAACCTTTTGGAGGAATCAAATAATGAAGTTTGTTTAGATTATAAGATGTTTAATGAATTGGTTATTACCAAATCCATTTAGCATATTAACCTCAGAGATTCAAATTACTTCCAGCATATTTCTGGATTGGTGTAGGTTCATTTTTTTTTCTTTTATTATCTGATAAGGCATGATATCTGTTAGGAGCCAAAGGTAGTATGGGCTACCTTTATCCCATATTGGTTAGAATGGGATGACCAATGTGGTACTCAAGTGGCTTAGCTCTCTCACTTCAATAGCTAGCTTTTGGGGTGTGGTTCTCCAAGGTGCTTAAGTACCTAACAATGGTATCAGAGCCGGTTGTTGACATTCTAGAGTGGAACTGGCGGACGGTTCTGACCGGGTGTGGCTGAGTGAAGTATCGTTGGAGTAGCCGCTGGGACGTCGGCTTTCCGGAGATGGGGTATTGTTAGGAACCAAGGTAGTATGGGCTACCTTTGTCCCACATTGGTTAGAATGGGATGACCAATGTGGTACTTAAGTGGCTTGGCTCTCCCACCTCAATAGCTAGCTTTTGGGGTGTGGTTCTCTAAGGTGCTTAAGTACTTAACAATATCATATCAAGTGGTTCATGAGAGACCACTCTTAGTTATTTTAAACTCCTGTAAAATATGAAGATAATTAGATTAGCTGTAGTTCTTGTAAATTCTTGTAAAGAATGAACATTCTTCTGATTTGGGAGTTTTAGTGAAATGTTATTTTGTGCTG ATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCCTACTTTCTCTTAACCGCCGATTATGGCCCTCAACCCAATTTTCTCGATCCCATCAAAAAGTTTATACTGTCAGCAGAAAGTTCTATTAAGGGTTTCATCTTTGGACCAAATAATCAATCTCAAGAAAGTCGAAGAGAGAAGCTCGGCTCCAATGGTGTCAAGGACAATCCATGA MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP
BLAST of Lsi05G020330 vs. TrEMBL
Match: A0A0A0L7H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122460 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 9.8e-32 Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 1
BLAST of Lsi05G020330 vs. TrEMBL
Match: A0A059CJG1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02283 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 6.6e-20 Identity = 48/66 (72.73%), Postives = 60/66 (90.91%), Query Frame = 1
BLAST of Lsi05G020330 vs. TrEMBL
Match: A0A0S3SYV2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G152600 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.6e-20 Identity = 54/79 (68.35%), Postives = 65/79 (82.28%), Query Frame = 1
BLAST of Lsi05G020330 vs. TrEMBL
Match: A0A068UMJ1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027936001 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.1e-19 Identity = 51/78 (65.38%), Postives = 62/78 (79.49%), Query Frame = 1
BLAST of Lsi05G020330 vs. TrEMBL
Match: A0A151UCK2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_021322 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 1.9e-19 Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 1
BLAST of Lsi05G020330 vs. TAIR10
Match: AT4G00530.1 (AT4G00530.1 unknown protein) HSP 1 Score: 91.7 bits (226), Expect = 2.2e-19 Identity = 41/60 (68.33%), Postives = 51/60 (85.00%), Query Frame = 1
BLAST of Lsi05G020330 vs. TAIR10
Match: AT1G01725.1 (AT1G01725.1 unknown protein) HSP 1 Score: 74.7 bits (182), Expect = 2.8e-14 Identity = 35/63 (55.56%), Postives = 51/63 (80.95%), Query Frame = 1
BLAST of Lsi05G020330 vs. NCBI nr
Match: gi|659075274|ref|XP_008438057.1| (PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo]) HSP 1 Score: 144.1 bits (362), Expect = 1.1e-31 Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 1
BLAST of Lsi05G020330 vs. NCBI nr
Match: gi|778677234|ref|XP_011650756.1| (PREDICTED: uncharacterized protein LOC105434815 [Cucumis sativus]) HSP 1 Score: 143.7 bits (361), Expect = 1.4e-31 Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 1
BLAST of Lsi05G020330 vs. NCBI nr
Match: gi|1009172618|ref|XP_015867370.1| (PREDICTED: uncharacterized protein LOC107404888 [Ziziphus jujuba]) HSP 1 Score: 120.2 bits (300), Expect = 1.7e-24 Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = 1
BLAST of Lsi05G020330 vs. NCBI nr
Match: gi|470142179|ref|XP_004306793.1| (PREDICTED: uncharacterized protein LOC101303265 [Fragaria vesca subsp. vesca]) HSP 1 Score: 105.1 bits (261), Expect = 5.5e-20 Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = 1
BLAST of Lsi05G020330 vs. NCBI nr
Match: gi|629113100|gb|KCW78060.1| (hypothetical protein EUGRSUZ_D02283 [Eucalyptus grandis]) HSP 1 Score: 104.4 bits (259), Expect = 9.5e-20 Identity = 48/66 (72.73%), Postives = 60/66 (90.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |