Lsi01G004960 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAATTGCATCAACACACCCCATTTCCCACCTCTGCAAAAGATCAAAGGCTTCATATGCTGTGAAGTAGAAGATTTAAACTTGGCATTGCCCATTGAAAAGACAGCTAATGGAGCTTATAAAGGCTTAAAGCTAACAAGCCAAGCCTTTACAACTTCAAGTGCAGTTCTAGAAGTTGAGCATGGCCCTCCTCCACTTCCTGTTCGTATTGATGATTCTTTTATCAACCCTGCAGATTTGTGCAAACTTCCTAAGGCCACCATTGTAGTCAGCAAACAACAGCTTGAGTTGATTTTGAGAAAATCCAAAGACATTGGCTCTAAAGGTATTGCTGTTCAATTCTCTGATAGTTTTGAGGTCGACGATCGATGCCCCAGATGGCGCCCCGCCTTGCCTACCATTCCAGAGGTTCGCAATTACTAG ATGGGAAATTGCATCAACACACCCCATTTCCCACCTCTGCAAAAGATCAAAGGCTTCATATGCTGTGAAGTAGAAGATTTAAACTTGGCATTGCCCATTGAAAAGACAGCTAATGGAGCTTATAAAGGCTTAAAGCTAACAAGCCAAGCCTTTACAACTTCAAGTGCAGTTCTAGAAGTTGAGCATGGCCCTCCTCCACTTCCTGTTCGTATTGATGATTCTTTTATCAACCCTGCAGATTTGTGCAAACTTCCTAAGGCCACCATTGTAGTCAGCAAACAACAGCTTGAGTTGATTTTGAGAAAATCCAAAGACATTGGCTCTAAAGGTATTGCTGTTCAATTCTCTGATAGTTTTGAGGTCGACGATCGATGCCCCAGATGGCGCCCCGCCTTGCCTACCATTCCAGAGGTTCGCAATTACTAG ATGGGAAATTGCATCAACACACCCCATTTCCCACCTCTGCAAAAGATCAAAGGCTTCATATGCTGTGAAGTAGAAGATTTAAACTTGGCATTGCCCATTGAAAAGACAGCTAATGGAGCTTATAAAGGCTTAAAGCTAACAAGCCAAGCCTTTACAACTTCAAGTGCAGTTCTAGAAGTTGAGCATGGCCCTCCTCCACTTCCTGTTCGTATTGATGATTCTTTTATCAACCCTGCAGATTTGTGCAAACTTCCTAAGGCCACCATTGTAGTCAGCAAACAACAGCTTGAGTTGATTTTGAGAAAATCCAAAGACATTGGCTCTAAAGGTATTGCTGTTCAATTCTCTGATAGTTTTGAGGTCGACGATCGATGCCCCAGATGGCGCCCCGCCTTGCCTACCATTCCAGAGGTTCGCAATTACTAG MGNCINTPHFPPLQKIKGFICCEVEDLNLALPIEKTANGAYKGLKLTSQAFTTSSAVLEVEHGPPPLPVRIDDSFINPADLCKLPKATIVVSKQQLELILRKSKDIGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY
BLAST of Lsi01G004960 vs. TrEMBL
Match: A0A0A0KHP3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511050 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 4.9e-58 Identity = 116/143 (81.12%), Postives = 120/143 (83.92%), Query Frame = 1
BLAST of Lsi01G004960 vs. TrEMBL
Match: B9HD50_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01910g PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 6.9e-12 Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = 1
BLAST of Lsi01G004960 vs. TrEMBL
Match: A0A067KKV0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13686 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-07 Identity = 45/150 (30.00%), Postives = 74/150 (49.33%), Query Frame = 1
BLAST of Lsi01G004960 vs. TrEMBL
Match: B9SA67_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0862440 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.7e-06 Identity = 44/150 (29.33%), Postives = 72/150 (48.00%), Query Frame = 1
BLAST of Lsi01G004960 vs. NCBI nr
Match: gi|700193834|gb|KGN49038.1| (hypothetical protein Csa_6G511050 [Cucumis sativus]) HSP 1 Score: 231.9 bits (590), Expect = 7.0e-58 Identity = 116/143 (81.12%), Postives = 120/143 (83.92%), Query Frame = 1
BLAST of Lsi01G004960 vs. NCBI nr
Match: gi|1009107271|ref|XP_015878797.1| (PREDICTED: uncharacterized protein LOC107415043 [Ziziphus jujuba]) HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13 Identity = 56/147 (38.10%), Postives = 78/147 (53.06%), Query Frame = 1
BLAST of Lsi01G004960 vs. NCBI nr
Match: gi|224089779|ref|XP_002308812.1| (hypothetical protein POPTR_0006s01910g [Populus trichocarpa]) HSP 1 Score: 78.6 bits (192), Expect = 9.9e-12 Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = 1
BLAST of Lsi01G004960 vs. NCBI nr
Match: gi|643723314|gb|KDP32905.1| (hypothetical protein JCGZ_13686 [Jatropha curcas]) HSP 1 Score: 63.9 bits (154), Expect = 2.5e-07 Identity = 45/150 (30.00%), Postives = 74/150 (49.33%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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