MELO3C008013 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008013
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionL-asparaginase 2-4
Locationchr8 : 6754641 .. 6755301 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAGAGAAAATGGGAAATTGCATCAACACACACCATTTCCCACCTCTGCAAAAGATCAAAGGTTTCATATGCTGTGAAGTAGAAGGTTTAGACTTGGGATTGCCAATTGGAAACGTAGCTGCTTATGGAGATTGTAAAAGCCAAGCTTTTACAACTTCAAGTGCAGTGGCTGAAGTTCAGCATAGCCCTCCTCCACTTCCTGTTCGTATTGATCATTCAATTGTCAAGCCTGCAGATAAAAGCAAACTTCCCAAGGCCACCATTGTAGTAAGCAAACAACAACTTGAGTTAATTTTGAGAAAATCCAAAAACTTTGGCTCTAAAGGTATTGCTGTTCAGTTCTCTGATCGTTTCAAGGTCGACGATGGCTGCCCCAGATGGCACCCTGCCTTGCCCACCATTCCTGAGGTTCGCAATTACTAATTTTGCCTTTTATATTGGAGAAAATTTTATCCATGATGTATTAAATCTGCGTCTAAAGAATAGGGACTTTTTAGAAACTTTTTTTCAACTAGACAAGGACTAAATAGACTTGTAATTCGTTTGGGAAATTTTGTATAGTTCTTTTTACTGATCGGCTGCTAGAGACGTTTGCTCGGTATTATCCCGAATTGATTTTCAACAAGGACCTTTTTTATGGAGAAAGAAGGAATTTTATAC

mRNA sequence

ACAAGAGAAAATGGGAAATTGCATCAACACACACCATTTCCCACCTCTGCAAAAGATCAAAGGTTTCATATGCTGTGAAGTAGAAGGTTTAGACTTGGGATTGCCAATTGGAAACGTAGCTGCTTATGGAGATTGTAAAAGCCAAGCTTTTACAACTTCAAGTGCAGTGGCTGAAGTTCAGCATAGCCCTCCTCCACTTCCTGTTCGTATTGATCATTCAATTGTCAAGCCTGCAGATAAAAGCAAACTTCCCAAGGCCACCATTGTAGTAAGCAAACAACAACTTGAGTTAATTTTGAGAAAATCCAAAAACTTTGGCTCTAAAGGTATTGCTGTTCAGTTCTCTGATCGTTTCAAGGTCGACGATGGCTGCCCCAGATGGCACCCTGCCTTGCCCACCATTCCTGAGGTTCGCAATTACTAATTTTGCCTTTTATATTGGAGAAAATTTTATCCATGATGTATTAAATCTGCGTCTAAAGAATAGGGACTTTTTAGAAACTTTTTTTCAACTAGACAAGGACTAAATAGACTTGTAATTCGTTTGGGAAATTTTGTATAGTTCTTTTTACTGATCGGCTGCTAGAGACGTTTGCTCGGTATTATCCCGAATTGATTTTCAACAAGGACCTTTTTTATGGAGAAAGAAGGAATTTTATAC

Coding sequence (CDS)

ATGGGAAATTGCATCAACACACACCATTTCCCACCTCTGCAAAAGATCAAAGGTTTCATATGCTGTGAAGTAGAAGGTTTAGACTTGGGATTGCCAATTGGAAACGTAGCTGCTTATGGAGATTGTAAAAGCCAAGCTTTTACAACTTCAAGTGCAGTGGCTGAAGTTCAGCATAGCCCTCCTCCACTTCCTGTTCGTATTGATCATTCAATTGTCAAGCCTGCAGATAAAAGCAAACTTCCCAAGGCCACCATTGTAGTAAGCAAACAACAACTTGAGTTAATTTTGAGAAAATCCAAAAACTTTGGCTCTAAAGGTATTGCTGTTCAGTTCTCTGATCGTTTCAAGGTCGACGATGGCTGCCCCAGATGGCACCCTGCCTTGCCCACCATTCCTGAGGTTCGCAATTACTAA

Protein sequence

MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVAAYGDCKSQAFTTSSAVAEVQHSPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFKVDDGCPRWHPALPTIPEVRNY*
Homology
[Close]
BLAST of MELO3C008013 vs. TrEMBL
Match: A0A0A0KHP3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511050 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.5e-61
Identity = 121/139 (87.05%), Postives = 125/139 (89.93%), Query Frame = 1 

Query: 1   MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVAAYGDCKSQAFTTSSAVAE--VQH 60
           MGNCINT HFPPLQKIKGFICCEVE L+L LPI N+AA   CK+QAFTTSSAVAE  V+H
Sbjct: 1   MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAA---CKNQAFTTSSAVAEAEVEH 60

Query: 61  SPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFKVD 120
            PPPLPVRIDHSIVKPAD  KLPK TIVVSKQQLELILRKSKNFGSKGIAVQFSD FKVD
Sbjct: 61  GPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVD 120

Query: 121 DGCPRWHPALPTIPEVRNY 138
           DGCPRWHPALPTIPEVRNY
Sbjct: 121 DGCPRWHPALPTIPEVRNY 136

[Close]
BLAST of MELO3C008013 vs. TrEMBL
Match: B9HD50_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01910g PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.7e-08
Identity = 33/56 (58.93%), Postives = 43/56 (76.79%), Query Frame = 1 

Query: 82  KATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFKVDDGCPRWHPALPTIPEVRNY 138
           K  IVV++QQLEL+LR SK F SKGIAV+FS+ FK  +G  +W P+L TIPEV+ +
Sbjct: 97  KVKIVVTRQQLELLLRNSKQFRSKGIAVRFSESFK--EGERKWRPSLVTIPEVQKF 150

[Close]
BLAST of MELO3C008013 vs. NCBI nr
Match: gi|700193834|gb|KGN49038.1| (hypothetical protein Csa_6G511050 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 5.1e-61
Identity = 121/139 (87.05%), Postives = 125/139 (89.93%), Query Frame = 1 

Query: 1   MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVAAYGDCKSQAFTTSSAVAE--VQH 60
           MGNCINT HFPPLQKIKGFICCEVE L+L LPI N+AA   CK+QAFTTSSAVAE  V+H
Sbjct: 1   MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAA---CKNQAFTTSSAVAEAEVEH 60

Query: 61  SPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFKVD 120
            PPPLPVRIDHSIVKPAD  KLPK TIVVSKQQLELILRKSKNFGSKGIAVQFSD FKVD
Sbjct: 61  GPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVD 120

Query: 121 DGCPRWHPALPTIPEVRNY 138
           DGCPRWHPALPTIPEVRNY
Sbjct: 121 DGCPRWHPALPTIPEVRNY 136

[Close]
BLAST of MELO3C008013 vs. NCBI nr
Match: gi|224089779|ref|XP_002308812.1| (hypothetical protein POPTR_0006s01910g [Populus trichocarpa])

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07
Identity = 33/56 (58.93%), Postives = 43/56 (76.79%), Query Frame = 1 

Query: 82  KATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFKVDDGCPRWHPALPTIPEVRNY 138
           K  IVV++QQLEL+LR SK F SKGIAV+FS+ FK  +G  +W P+L TIPEV+ +
Sbjct: 97  KVKIVVTRQQLELLLRNSKQFRSKGIAVRFSESFK--EGERKWRPSLVTIPEVQKF 150

The following BLAST results are available for this feature:
BLAST of MELO3C008013 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHP3_CUCSA3.5e-6187.05Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511050 PE=4 SV=1[more]
B9HD50_POPTR7.7e-0858.93Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01910g PE=4 SV=1[more]
BLAST of MELO3C008013 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193834|gb|KGN49038.1|5.1e-6187.05hypothetical protein Csa_6G511050 [Cucumis sativus][more]
gi|224089779|ref|XP_002308812.1|1.1e-0758.93hypothetical protein POPTR_0006s01910g [Populus trichocarpa][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU56274melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008013T1MELO3C008013T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU56274MU56274transcribed_cluster