Cp4.1LG13g04200 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG13g04200
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein MKS1
LocationCp4.1LG13 : 6294724 .. 6297911 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCGTTATAGACTTAGGGTTTGACGGTTTCAACCATGAAAAATNTAACTTATCTTTATATAAACCTTTCAACTCTCCATGTCTTCTTCTCTTTGTTCTTCTAACACCTAATGCCATGGCTGAAAGAAAAGAGGTTCAACTCCAAGGTCCCCGTCCGGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCGGCAAGCCGCCGCACCGGCCCGTCATCATCTACACCGTCTCCCCCAAGGTCATCCACACCGACCCTACTCAATTCAAGGACTTGGTCCAGCGTCTCACTGGCCACAAACCCTCCTCCCATGACTCTCACCATTCACCCAATACAACGATGATTATGAGTACCAATCATCAAGGAGCAGAAAGGGTAGGTCACGGAATATTATCGCCAACACCAGGGTTGCTGCCGCCGATTCCGACAAATATTTTCACTCCGACACCGCCGCAGTCAGCTGAGCTCAGCCCTCTTACCCACTTTTTTCGGGATCTTAGCCCCATAGCTCCGAATCGATTCTCGTCATCGCTAGATTTCTTCCAAAACTTCCCTGATTTACATTGATTTTGTTTGCATAATTAATTGTATTTAATTTTATCGTTATTTATGTAGAAAAAATCTATAAAGTTTAAGCATAATGATACAATGAGAGACTTTTCCCCATTTTTGTATGATTGTAAGTGGGAGTAGTTCGATGTCTTTTACCTTATAAAACGAAACCTTCGTGAAAAAAATAACCTAACATCTATTTTATCGAATATTTTCTCAAATTTTATCATAATTTTAATTAAGTTTTTATAATCAATGAAAACAAATTAATTTGAAAATGAATTTTTCGATATTAGCAAAAGTCAGTGAATAAGTTTTAAATTTTAAATATTATTTCATTTTTTCCGAAGTAATAATTATCTTAATCAATTAAATTACAGTAAAATTAAAAAAAATCAAATTTATAATCTAATAATAAATATATATTATATTTTTATCTCTAAATTTTGAGTTTAATTTCCAACCATATTACAAATTAAAAATTAAAAATTAAAATTCATTTTGGGTCTATTAATTCTACCATTTAAACCACATTTTTAAAAGTATTTTTAATTAATTAACAATATTAATAACCAAAAAATTGAAATTTATTTATATATATATGTGCAAGAAATCCGCCAAATTGTGAAAGAAATGAGAGAATGGATTCTACGGCCACCAGAAAGCGAAAGATGAAGAAGCCGCCGGCGCCGCCGAGGGCCGCGAAAGCCCAAGCGCCGGCGAAAATGAGGAAGTCGAAGAAAATCATTGAAGTAGAAGAAGACGCCTCAGAGTTCAGGCACATGGTTCAATTCCCTGGCAGCAGTAGCAGCCGCTCCGACTCCGATTCCGACCACCCTTCTACTCCCACTTCCACTTCTACTTCTTCTTCCACTTTTTCCGATGGCCGGAATGGTTTATCGCCGTCGACGGAAGAACTGAGCGTTTATGATTACGAGGGCTGGGAAGACCCTCTTGTAATTGTAAAACCACGGCCCTCTCCCGGAATTCCTCCATTAACAACGTATTCCGGTTTTGATTACTCCGGTTTGGTTTATCCACTTCCGCCGGTTTTCAAGAACCCTCTGCCTCCGCTTTACTACCGGCCCGACTTTCCCGACCCCAATTAATTCCATCCCTCCTCGATTTCTTCTTATTATTATTATTACTTTTTACTGCTGTGAAATTTCTTGTATTCGTTTAATATATCTACAAACTGTTAGAGATCAAGATTTACCCGTTTTACCTTTTTACTCCGTTTACTTACCCGCTAATTTACAGAATGATCGTGGCTTTATAAACAAAGAATACTCTCTCTATTGGTACGAGACCCTTTGAGAAAGTCCAAAGCAAAGTCACGAGAGCTTATGCTCAAAGTGAACAATATCATACCATTGTGGAGGGTCGTGTTCGTCTAACATGGTATTAGAGTCATGCCTTAAATTTAGTCGTGCCAATAGATTGGTAAATTCTCAAATATCGAACAAAAGACTCCCAAAGAATCGAGGCTCGATTAAGGAGAGACGCAATAAAAAAAGAACCACATTCTCTACTTTAGGGAATGATCATGGGTTTACAAATAAAGAATACTCTCTCTATTGTAACAATTTTATCTCTGTTAAATTTCATATTTATTTAATTTTAAAATTTTAAAATTACCCGTTAATTTGAATATAATTATTATTAAATATGAATAGAATGTCGTTATCGTTCATTTATATTGATTTATATTTTGATATTTTTAATATTTTTATTATTGGTTTTTATATTATAGTTTTATTCTTATTAAATAAACAACATGGCTAGTTTTAAAAAAATGAATTTCCTAAAAAGATTATTTTTATATTAAAAAAAAAAATTGTAGGAAAAAGAGGGCTAAATAATTAAAAGAAAGTCAAAAGAATGGCATCTTTGTTTATGCCATTAAAAACATTTTAATTTATCCCCCAATATTTTAAAAATATATCTAAACATCAACTATACAAATAAATTAATAATTTTCTATGGTATTGAGATGACATATGTANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGACAAATTCAAACTTCTAAACCACCAAGAAACCCTTAAATATTGATATTAATATTAAATACTCTAACTTATCTTTATATAAACCTTTCAACTCTCCATGTCTTCTTCTCTTTGTTCTTCTAACACCTAATGCCATGGCTGAAAGAAAAGAGGTTCAACTCCAAGGTCCCCGTCCGGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCGGCAAGCCGCCGCACCGGCCCGTCATCATCTACACCGTCTCCCCCAAGGTCATCCACACCGACCCTACTCAATTCAAGGACTTGGTCCAGCGTCTCACTGGCCACAAACCCTCCTCCCATGACTCTCACCATTCACCCAATACAACGATGATTATGAGTACCAATCATCAAGGAGCAGAAAGGGTAGGTCACGGAATATTATCGCCAACACCAGGGTTGCTGCCGCCGATTCCGACAAATATTTTCACTCCGACACCGCCGCAGTCAGCTGAGCTCAGCCCTCTTACCCACTTTTTTCGGGATCTTAGCCCCATAGCTCCGAATCGATTCTCGTCATCGCTAGATTTCTTCCAAAACTTCCCTGATTTACATTGA

mRNA sequence

ATGGTATCAAAAGAGGTTCAACTCCAAGGTCCCCGTCCGGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCGGCAAGCCGCCGCACCGGCCCGTCATCATCTACACCGTCTCCCCCAAGGTCATCCACACCGACCCTACTCAATTCAAGGACTTGGTCCAGCGTCTCACTGGCCACAAACCCTCCTCCCATGACTCTCACCATTCACCCAATACAACGATGATTATGAGTACCAATCATCAAGGAGCAGAAAGGGTAGGTCACGGAATATTATCGCCAACACCAGGGTTGCTGCCGCCGATTCCGACAAATATTTTCACTCCGACACCGCCGCAGTCAGCTGAGCTCAGCCCTCTTACCCACTTTTTTCGGGATCTTAGCCCCATAGCTCCGAATCGATTCTCAAAAGAGGTTCAACTCCAAGGTCCCCGTCCGGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCGGCAAGCCGCCGCACCGGCCCGTCATCATCTACACCGTCTCCCCCAAGGTCATCCACACCGACCCTACTCAATTCAAGGACTTGGTCCAGCGTCTCACTGGCCACAAACCCTCCTCCCATGACTCTCACCATTCACCCAATACAACGATGATTATGAGTACCAATCATCAAGGAGCAGAAAGGGTAGGTCACGGAATATTATCGCCAACACCAGGGTTGCTGCCGCCGATTCCGACAAATATTTTCACTCCGACACCGCCGCAGTCAGCTGAGCTCAGCCCTCTTACCCACTTTTTTCGGGATCTTAGCCCCATAGCTCCGAATCGATTCTCGTCATCGCTAGATTTCTTCCAAAACTTCCCTGATTTACATTGA

Coding sequence (CDS)

ATGGTATCAAAAGAGGTTCAACTCCAAGGTCCCCGTCCGGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCGGCAAGCCGCCGCACCGGCCCGTCATCATCTACACCGTCTCCCCCAAGGTCATCCACACCGACCCTACTCAATTCAAGGACTTGGTCCAGCGTCTCACTGGCCACAAACCCTCCTCCCATGACTCTCACCATTCACCCAATACAACGATGATTATGAGTACCAATCATCAAGGAGCAGAAAGGGTAGGTCACGGAATATTATCGCCAACACCAGGGTTGCTGCCGCCGATTCCGACAAATATTTTCACTCCGACACCGCCGCAGTCAGCTGAGCTCAGCCCTCTTACCCACTTTTTTCGGGATCTTAGCCCCATAGCTCCGAATCGATTCTCAAAAGAGGTTCAACTCCAAGGTCCCCGTCCGGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCGGCAAGCCGCCGCACCGGCCCGTCATCATCTACACCGTCTCCCCCAAGGTCATCCACACCGACCCTACTCAATTCAAGGACTTGGTCCAGCGTCTCACTGGCCACAAACCCTCCTCCCATGACTCTCACCATTCACCCAATACAACGATGATTATGAGTACCAATCATCAAGGAGCAGAAAGGGTAGGTCACGGAATATTATCGCCAACACCAGGGTTGCTGCCGCCGATTCCGACAAATATTTTCACTCCGACACCGCCGCAGTCAGCTGAGCTCAGCCCTCTTACCCACTTTTTTCGGGATCTTAGCCCCATAGCTCCGAATCGATTCTCGTCATCGCTAGATTTCTTCCAAAACTTCCCTGATTTACATTGA

Protein sequence

MVSKEVQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHSPNTTMIMSTNHQGAERVGHGILSPTPGLLPPIPTNIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSKEVQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHSPNTTMIMSTNHQGAERVGHGILSPTPGLLPPIPTNIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH
Homology
[Close]
BLAST of Cp4.1LG13g04200 vs. Swiss-Prot
Match: MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 6.4e-10
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 1 

Query: 121 THFFRDLSPIAPNRFSKEVQLQGPRPAALKITKDSHKIGKPP-----------------H 180
           + +F   +P       +++Q+ GPRP+ L + KDSHKI KPP                  
Sbjct: 4   SEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPR 63

Query: 181 RPVIIYTVSPKVIHTDPTQFKDLVQRLTG 193
            PV+IY VSPKV+H   ++F ++VQRLTG
Sbjct: 64  EPVVIYAVSPKVVHATASEFMNVVQRLTG 92

[Close]
BLAST of Cp4.1LG13g04200 vs. Swiss-Prot
Match: NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.2e-08
Identity = 41/120 (34.17%), Postives = 54/120 (45.00%), Query Frame = 1 

Query: 133 NRFSKEVQLQGPRPAALKITKDSHKI-------------------------GKPPHRPVI 192
           NR  +     GP+P  LK+  DSHKI                          +PP  PV 
Sbjct: 3   NRSPRSRGNMGPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVN 62

Query: 193 IYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHSPNTTMIMSTNHQGAERVGHGILSP 228
           IYTV+P++IHT P  F  LVQRLTG   +S  S  S ++T          +   HG++SP
Sbjct: 63  IYTVTPRIIHTHPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVD-TSHGLISP 121

[Close]
BLAST of Cp4.1LG13g04200 vs. Swiss-Prot
Match: VQ20_ARATH (VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.8e-08
Identity = 32/67 (47.76%), Postives = 38/67 (56.72%), Query Frame = 1 

Query: 11  PRPAALKITKDSHKIGKPP-----------HRPVIIYTVSPKVIHTDPTQFKDLVQRLTG 67
           P P  LK+ KDSH I KPP             PVIIYT +P++IHT+P  F  LVQ+LTG
Sbjct: 41  PSPPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTG 100

[Close]
BLAST of Cp4.1LG13g04200 vs. TrEMBL
Match: A0A0A0KI80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338080 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.3e-43
Identity = 109/174 (62.64%), Postives = 122/174 (70.11%), Query Frame = 1 

Query: 137 KEVQLQGPRPAALKITKDSHKIGKPP------HRPVIIYTVSPKVIHTDPTQFKDLVQRL 196
           KE+QLQGPRP+ALKITKDSHKI KPP      HRPVIIYTVSPK+IHTDPT+FKDLVQRL
Sbjct: 5   KELQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTEFKDLVQRL 64

Query: 197 TGH--KPSS-------HDSHHSPNTTMIMST-----NHQGAER-VGHGILSPTPGLLPPI 256
           TGH   PSS       HD H  P+   I +T     +  G +R + HGILSPTPGLLPPI
Sbjct: 65  TGHHQPPSSSSNHALVHDHHPPPDHISIPTTDDPIDDQAGVDRIIAHGILSPTPGLLPPI 124

Query: 257 PTNIFTPTPPQ------SAELSPLTHFFRDLSPIAPNRFSSSLDFF-QNFPDLH 283
            + IF P PPQ      + +L+ LT FF DLSPIA N FSSSLDFF QNFPD H
Sbjct: 125 SSTIFNP-PPQAPAAAAAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH 177

[Close]
BLAST of Cp4.1LG13g04200 vs. TrEMBL
Match: M5VJC3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026048mg PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.3e-21
Identity = 82/216 (37.96%), Postives = 105/216 (48.61%), Query Frame = 1 

Query: 137 KEVQLQGPRPAALKITKDSHKIGKPP--------------------HRPVIIYTVSPKVI 196
           +E+QLQGPRP  L++ KDSHKI KPP                     +PVIIYTVSPKVI
Sbjct: 11  RELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSQQPHLYQQPRQPVIIYTVSPKVI 70

Query: 197 HTDPTQFKDLVQRLTG---------------HKPSSHDSHHSPNT--TMIMSTNH----- 256
           HT+P++F DLVQRLTG               + P ++D+ ++ N+    +M T+      
Sbjct: 71  HTNPSEFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNSNNNNSRDDQVMKTSSAQDVA 130

Query: 257 QGAERVGH-----------GILSPTPGLLPPIPTNIFTPTPPQSAELSPLTHFFRDLSPI 282
           QG E  G            GILSP P  L PIP+N F+P         P   FF DLSP+
Sbjct: 131 QGMEMDGDEGGVRQKGLFPGILSPGPASLNPIPSNFFSP---------PSDSFFHDLSPV 190

[Close]
BLAST of Cp4.1LG13g04200 vs. TrEMBL
Match: A0A151R6L2_CAJCA (Protein MKS1 OS=Cajanus cajan GN=KK1_040566 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.3e-17
Identity = 81/221 (36.65%), Postives = 97/221 (43.89%), Query Frame = 1 

Query: 137 KEVQLQGPRPAALKITKDSHKIGKPP------------HRPVIIYTVSPKVIHTDPTQFK 196
           +E+QLQGPRP  L+I KDSHKI KPP              PVIIYTVSPKVIHT P+ F 
Sbjct: 15  RELQLQGPRPTPLRINKDSHKIKKPPVAPPPAQPQAPPRLPVIIYTVSPKVIHTTPSDFM 74

Query: 197 DLVQRLTGHKPSSHDS--------------------------------------HHSPNT 256
            LVQRLTG   SS  S                                       H+P+ 
Sbjct: 75  SLVQRLTGSSSSSSSSSSSDKVATDPLTGDKGHIPVSPAARYAAIEMARTTQSIKHNPSE 134

Query: 257 TMIMSTNHQGAERVGH-------GILSPTPGLLPPIPTNIFTPTPPQSAELSPLTHFFRD 281
               S +  G E VGH       GILSP P  L PIP+N F+   P S + + +  FF D
Sbjct: 135 N---SGDVGGVEIVGHERPNMFHGILSPGPASLSPIPSNFFS---PPSNDPNNMVSFFND 194

[Close]
BLAST of Cp4.1LG13g04200 vs. TrEMBL
Match: A0A0B2PJC9_GLYSO (Protein MKS1 OS=Glycine soja GN=glysoja_040860 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.8e-17
Identity = 81/199 (40.70%), Postives = 94/199 (47.24%), Query Frame = 1 

Query: 132 PNRFSKEVQLQGPRPAALKITKDSHKIGKPP-------------HRPVIIYTVSPKVIHT 191
           P+  S + QLQGPRP  L+I KDSHKI K P              +PVIIYTVSPKVIHT
Sbjct: 7   PSGRSPKRQLQGPRPPPLRINKDSHKIKKKPPVAPPSSQPQPPLRQPVIIYTVSPKVIHT 66

Query: 192 DPTQFKDLVQRLTGHKPSSHDSHHSPNTTMIMSTN----HQGAERV-------GHGILSP 251
            P+ F  LVQRLT    SS  S  S N   I   N    H G   V        HGILSP
Sbjct: 67  TPSDFMSLVQRLTSSSSSSSSS--SSNKVSIDPLNGNKGHGGGHGVLLKRPNMFHGILSP 126

Query: 252 TP-GLLPPIPTNIFTPTPPQSAELSP-LTHFFRDLSPI--------------------AP 281
            P   L PIP+N F+P       + P +  F+ DLSPI                    +P
Sbjct: 127 GPSSSLSPIPSNFFSP-----PSIDPNMGSFYHDLSPILRNNRNFMEGTTTTATFIMPSP 186

[Close]
BLAST of Cp4.1LG13g04200 vs. TrEMBL
Match: S8D430_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_00585 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.2e-16
Identity = 70/160 (43.75%), Postives = 82/160 (51.25%), Query Frame = 1 

Query: 7   QLQGPRPAALKITKDSHKIGKPP----------HRPVIIYTVSPKVIHTDPTQFKDLVQR 66
           +L GPRP  LK++KDSHKI KPP            PVIIYTVSPKVIH DP++F  LVQR
Sbjct: 36  ELLGPRPTPLKVSKDSHKIRKPPVAPQQPAALPRPPVIIYTVSPKVIHADPSEFMSLVQR 95

Query: 67  LTGHKPSSHDSHHSP-------------NTTMIMSTNHQ---GAERVG----------HG 126
           LT    S++D   SP             N     ST+HQ   G   +G           G
Sbjct: 96  LT-CPDSTYDGTVSPAARFASIERTRRQNINSSSSTDHQQNGGIFELGIPEFVEQQRLPG 155

Query: 127 ILSPTPGLLPPIPTNIFTPTPPQSAELSPLTH-FFRDLSP 130
           ILSP P  L PI  NIF+P PP  +  S  T+  F D SP
Sbjct: 156 ILSPNPNSLLPISRNIFSPPPPPPSSSSHQTNQLFHDFSP 194

[Close]
BLAST of Cp4.1LG13g04200 vs. TAIR10
Match: AT3G18690.1 (AT3G18690.1 MAP kinase substrate 1)

HSP 1 Score: 66.2 bits (160), Expect = 3.6e-11
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 1 

Query: 121 THFFRDLSPIAPNRFSKEVQLQGPRPAALKITKDSHKIGKPP-----------------H 180
           + +F   +P       +++Q+ GPRP+ L + KDSHKI KPP                  
Sbjct: 4   SEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPR 63

Query: 181 RPVIIYTVSPKVIHTDPTQFKDLVQRLTG 193
            PV+IY VSPKV+H   ++F ++VQRLTG
Sbjct: 64  EPVVIYAVSPKVVHATASEFMNVVQRLTG 92

[Close]
BLAST of Cp4.1LG13g04200 vs. TAIR10
Match: AT1G21326.1 (AT1G21326.1 VQ motif-containing protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.3e-10
Identity = 41/110 (37.27%), Postives = 53/110 (48.18%), Query Frame = 1 

Query: 10  GPRPAALKITKDSHKI-------------------------GKPPHRPVIIYTVSPKVIH 69
           GPRP  LK+  DSHKI                          +PP  PVIIYTVSP++IH
Sbjct: 13  GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYTVSPRIIH 72

Query: 70  TDPTQFKDLVQRLTGHKPSSHDSHHSPNTTMIMSTNHQGAERVGHGILSP 95
           T P  F  LVQRLTG K S+  +  S +++     +        HG++SP
Sbjct: 73  THPNNFMTLVQRLTG-KTSTSTTSSSYSSSTSAPKDASTMVDTSHGLISP 121

[Close]
BLAST of Cp4.1LG13g04200 vs. TAIR10
Match: AT1G21320.1 (AT1G21320.1 nucleotide binding;nucleic acid binding)

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-10
Identity = 41/120 (34.17%), Postives = 54/120 (45.00%), Query Frame = 1 

Query: 133 NRFSKEVQLQGPRPAALKITKDSHKI-------------------------GKPPHRPVI 192
           NR  +     GP+P  LK+  DSHKI                          +PP  PV 
Sbjct: 3   NRSPRSRGNMGPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVN 62

Query: 193 IYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHSPNTTMIMSTNHQGAERVGHGILSP 228
           IYTV+P++IHT P  F  LVQRLTG   +S  S  S ++T          +   HG++SP
Sbjct: 63  IYTVTPRIIHTHPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVD-TSHGLISP 121

[Close]
BLAST of Cp4.1LG13g04200 vs. TAIR10
Match: AT3G18360.1 (AT3G18360.1 VQ motif-containing protein)

HSP 1 Score: 59.3 bits (142), Expect = 4.4e-09
Identity = 32/67 (47.76%), Postives = 38/67 (56.72%), Query Frame = 1 

Query: 11  PRPAALKITKDSHKIGKPP-----------HRPVIIYTVSPKVIHTDPTQFKDLVQRLTG 67
           P P  LK+ KDSH I KPP             PVIIYT +P++IHT+P  F  LVQ+LTG
Sbjct: 41  PSPPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTG 100

[Close]
BLAST of Cp4.1LG13g04200 vs. TAIR10
Match: AT1G68450.1 (AT1G68450.1 VQ motif-containing protein)

HSP 1 Score: 51.6 bits (122), Expect = 9.2e-07
Identity = 31/64 (48.44%), Postives = 37/64 (57.81%), Query Frame = 1 

Query: 7  QLQGPRPAALKITKDSHKIGKP--------PH---RPVIIYTVSPKVIHTDPTQFKDLVQ 60
          ++ G RP++LK+  +SH I K         PH    PVIIY  SPKVIHT    F  LVQ
Sbjct: 8  EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQ 67

[Close]
BLAST of Cp4.1LG13g04200 vs. NCBI nr
Match: gi|449462192|ref|XP_004148825.1| (PREDICTED: protein MKS1-like [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 3.4e-43
Identity = 109/174 (62.64%), Postives = 122/174 (70.11%), Query Frame = 1 

Query: 137 KEVQLQGPRPAALKITKDSHKIGKPP------HRPVIIYTVSPKVIHTDPTQFKDLVQRL 196
           KE+QLQGPRP+ALKITKDSHKI KPP      HRPVIIYTVSPK+IHTDPT+FKDLVQRL
Sbjct: 5   KELQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTEFKDLVQRL 64

Query: 197 TGH--KPSS-------HDSHHSPNTTMIMST-----NHQGAER-VGHGILSPTPGLLPPI 256
           TGH   PSS       HD H  P+   I +T     +  G +R + HGILSPTPGLLPPI
Sbjct: 65  TGHHQPPSSSSNHALVHDHHPPPDHISIPTTDDPIDDQAGVDRIIAHGILSPTPGLLPPI 124

Query: 257 PTNIFTPTPPQ------SAELSPLTHFFRDLSPIAPNRFSSSLDFF-QNFPDLH 283
            + IF P PPQ      + +L+ LT FF DLSPIA N FSSSLDFF QNFPD H
Sbjct: 125 SSTIFNP-PPQAPAAAAAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH 177

[Close]
BLAST of Cp4.1LG13g04200 vs. NCBI nr
Match: gi|659082070|ref|XP_008441652.1| (PREDICTED: protein MKS1-like, partial [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 5.4e-41
Identity = 104/172 (60.47%), Postives = 120/172 (69.77%), Query Frame = 1 

Query: 137 KEVQLQGPRPAALKITKDSHKIGKPP------HRPVIIYTVSPKVIHTDPTQFKDLVQRL 196
           +++QLQGPRP+ALKITKDSHKI KPP      HRPVIIYTVSPK+IHTDPTQFKDLVQRL
Sbjct: 6   RKLQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTQFKDLVQRL 65

Query: 197 TG-HKPSSHDSHHS-------PNTTMIMSTN-----HQGAER-VGHGILSPTPGLLPPIP 256
           TG H+P S  S+H+       P+   I  T+       G +R + HGILSPTPGLLPPI 
Sbjct: 66  TGHHQPPSSSSNHALVHDHPPPDPISIPITDAIDDQAGGVDRIIAHGILSPTPGLLPPIS 125

Query: 257 TNIFTPTPPQSA-----ELSPLTHFFRDLSPIAPNRFSSSLDFF-QNFPDLH 283
             IF+  PPQ+A     +L+ LT FF DLSPI  N FS SLDFF QNFPD H
Sbjct: 126 PTIFSTPPPQAAAAATGDLTSLTQFFHDLSPIPANHFSPSLDFFQQNFPDFH 177

[Close]
BLAST of Cp4.1LG13g04200 vs. NCBI nr
Match: gi|470108489|ref|XP_004290549.1| (PREDICTED: protein MKS1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 114.8 bits (286), Expect = 2.5e-22
Identity = 87/214 (40.65%), Postives = 107/214 (50.00%), Query Frame = 1 

Query: 137 KEVQLQGPRPAALKITKDSHKIGKPP---------------HRPVIIYTVSPKVIHTDPT 196
           KE+QLQGPRPA LKI KDSHKI KPP                +PVIIYTVSPK+IHT+P+
Sbjct: 14  KELQLQGPRPAPLKIHKDSHKIKKPPVVPQPSQANQPHQPPRQPVIIYTVSPKIIHTNPS 73

Query: 197 QFKDLVQRLTGHKPSS----------HDSHHSPN-----TTM--IMSTNHQGA------- 256
            F +LVQRLTG  PS+           + H + N     +TM    S++H+G        
Sbjct: 74  DFMNLVQRLTGLPPSNSSASCSSSSPRNDHQNTNGGGGESTMEQSRSSDHEGTMDMDDDH 133

Query: 257 -ERVGH------------GILSPTPGLLPPIPTNIFTPTPPQSAELSPLTHFFRDLSPI- 282
            +RV              GILSP PG LPPIP+N F+P         P   FF DLSP+ 
Sbjct: 134 DDRVHDTGLKLQQKGMFPGILSPAPGSLPPIPSNFFSP---------PADSFFHDLSPVL 193

[Close]
BLAST of Cp4.1LG13g04200 vs. NCBI nr
Match: gi|645264333|ref|XP_008237628.1| (PREDICTED: protein MKS1 [Prunus mume])

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 82/216 (37.96%), Postives = 105/216 (48.61%), Query Frame = 1 

Query: 137 KEVQLQGPRPAALKITKDSHKIGKPP--------------------HRPVIIYTVSPKVI 196
           +E+QLQGPRP  L++ KDSHKI KPP                     +PVIIYTVSPKVI
Sbjct: 11  RELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSHQPHLYQQPRQPVIIYTVSPKVI 70

Query: 197 HTDPTQFKDLVQRLTG---------------HKPSSHDSHHSPNT--TMIMSTN-----H 256
           HT+P+ F DLVQRLTG               + P ++D++++ N+    +M T+      
Sbjct: 71  HTNPSDFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNNNNNNSRDDQVMKTSSAQDVS 130

Query: 257 QGAERVGH-----------GILSPTPGLLPPIPTNIFTPTPPQSAELSPLTHFFRDLSPI 282
           QG E  G            GILSP P  L PIP+N F+P         P   FF DLSP+
Sbjct: 131 QGMEMDGDDGGVRQKGLFPGILSPGPASLNPIPSNFFSP---------PSDSFFHDLSPV 190

[Close]
BLAST of Cp4.1LG13g04200 vs. NCBI nr
Match: gi|595792449|ref|XP_007199973.1| (hypothetical protein PRUPE_ppa026048mg [Prunus persica])

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 82/216 (37.96%), Postives = 105/216 (48.61%), Query Frame = 1 

Query: 137 KEVQLQGPRPAALKITKDSHKIGKPP--------------------HRPVIIYTVSPKVI 196
           +E+QLQGPRP  L++ KDSHKI KPP                     +PVIIYTVSPKVI
Sbjct: 11  RELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSQQPHLYQQPRQPVIIYTVSPKVI 70

Query: 197 HTDPTQFKDLVQRLTG---------------HKPSSHDSHHSPNT--TMIMSTNH----- 256
           HT+P++F DLVQRLTG               + P ++D+ ++ N+    +M T+      
Sbjct: 71  HTNPSEFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNSNNNNSRDDQVMKTSSAQDVA 130

Query: 257 QGAERVGH-----------GILSPTPGLLPPIPTNIFTPTPPQSAELSPLTHFFRDLSPI 282
           QG E  G            GILSP P  L PIP+N F+P         P   FF DLSP+
Sbjct: 131 QGMEMDGDEGGVRQKGLFPGILSPGPASLNPIPSNFFSP---------PSDSFFHDLSPV 190

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g04200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MKS1_ARATH6.4e-1038.20Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2[more]
NSRB_ARATH1.2e-0834.17Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1[more]
VQ20_ARATH7.8e-0847.76VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1[more]
BLAST of Cp4.1LG13g04200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI80_CUCSA2.3e-4362.64Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338080 PE=4 SV=1[more]
M5VJC3_PRUPE7.3e-2137.96Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026048mg PE=4 SV=1[more]
A0A151R6L2_CAJCA1.3e-1736.65Protein MKS1 OS=Cajanus cajan GN=KK1_040566 PE=4 SV=1[more]
A0A0B2PJC9_GLYSO3.8e-1740.70Protein MKS1 OS=Glycine soja GN=glysoja_040860 PE=4 SV=1[more]
S8D430_9LAMI3.2e-1643.75Uncharacterized protein OS=Genlisea aurea GN=M569_00585 PE=4 SV=1[more]
BLAST of Cp4.1LG13g04200 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18690.13.6e-1138.20 MAP kinase substrate 1[more]
AT1G21326.12.3e-1037.27 VQ motif-containing protein[more]
AT1G21320.16.8e-1034.17 nucleotide binding;nucleic acid binding[more]
AT3G18360.14.4e-0947.76 VQ motif-containing protein[more]
AT1G68450.19.2e-0748.44 VQ motif-containing protein[more]
BLAST of Cp4.1LG13g04200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462192|ref|XP_004148825.1|3.4e-4362.64PREDICTED: protein MKS1-like [Cucumis sativus][more]
gi|659082070|ref|XP_008441652.1|5.4e-4160.47PREDICTED: protein MKS1-like, partial [Cucumis melo][more]
gi|470108489|ref|XP_004290549.1|2.5e-2240.65PREDICTED: protein MKS1 [Fragaria vesca subsp. vesca][more]
gi|645264333|ref|XP_008237628.1|1.0e-2037.96PREDICTED: protein MKS1 [Prunus mume][more]
gi|595792449|ref|XP_007199973.1|1.0e-2037.96hypothetical protein PRUPE_ppa026048mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008889VQ
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g04200.1Cp4.1LG13g04200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 171..192
score: 7.8E-11coord: 38..59
score: 7.8
NoneNo IPR availablePANTHERPTHR33143FAMILY NOT NAMEDcoord: 134..192
score: 1.9
NoneNo IPR availablePANTHERPTHR33143:SF6F16F4.1 PROTEIN-RELATEDcoord: 134..192
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG13g04200Cucsa.077000Cucumber (Gy14) v1cgycpeB0127
Cp4.1LG13g04200CmaCh15G006170Cucurbita maxima (Rimu)cmacpeB305
Cp4.1LG13g04200CmaCh04G024300Cucurbita maxima (Rimu)cmacpeB705
Cp4.1LG13g04200CmoCh04G025470Cucurbita moschata (Rifu)cmocpeB657
Cp4.1LG13g04200CmoCh15G006210Cucurbita moschata (Rifu)cmocpeB268
Cp4.1LG13g04200Cla013849Watermelon (97103) v1cpewmB170
Cp4.1LG13g04200Csa6G338080Cucumber (Chinese Long) v2cpecuB200
Cp4.1LG13g04200MELO3C008398Melon (DHL92) v3.5.1cpemeB168
Cp4.1LG13g04200ClCG08G006550Watermelon (Charleston Gray)cpewcgB180
Cp4.1LG13g04200CSPI06G18010Wild cucumber (PI 183967)cpecpiB201
Cp4.1LG13g04200Lsi08G005310Bottle gourd (USVL1VR-Ls)cpelsiB158
Cp4.1LG13g04200MELO3C008398.2Melon (DHL92) v3.6.1cpemedB200
Cp4.1LG13g04200CsaV3_6G030890Cucumber (Chinese Long) v3cpecucB0240
Cp4.1LG13g04200Bhi04G001408Wax gourdcpewgoB0252
Cp4.1LG13g04200CsGy6G017490Cucumber (Gy14) v2cgybcpeB743
Cp4.1LG13g04200Carg01590Silver-seed gourdcarcpeB1157
Cp4.1LG13g04200Carg15779Silver-seed gourdcarcpeB0095
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG13g04200Cp4.1LG01g21070Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG13g04200Cucumber (Chinese Long) v3cpecucB0237
Cp4.1LG13g04200Cucurbita pepo (Zucchini)cpecpeB228
Cp4.1LG13g04200Cucurbita moschata (Rifu)cmocpeB009
Cp4.1LG13g04200Cucumber (Gy14) v2cgybcpeB740