CmaCh15G006170 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G006170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	VQ motif-containing protein, putative
Location	Cma_Chr15 : 2917159 .. 2917647 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCTCTTTGTTCTTCAACACCTAATGCCATGGCTGAAAGAAAAGAGGTTCAACTCCAAGGTCCCCGCCCCGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCGGCAAGCCGCCACACCGGCCTGTCATCATCTACTCCGTCTCCCCCAAAGTCATCCACACCGACCCTACTCAATTCAAGGACTTGGTCCAGCGCCTCACTGGCCACAAACCCTCCTCCCATGACTCTCACCATCCACCCAATACGACGATGATTATGAGTACCAATCCTCACGGAGCAGAGAGGGTAGGTCACGGGATATTATCGCCAACGCCGGGGTTGCTGCCGCCGATTCCAGCGAATATTTTCACCCCAACGCCGCCGCAGTCAGCTGAGCTCAGCCCTCTTACCCACTTTTTCCGGGATCTTAGCCCCATAGCTCCCAATCGATTCTCGTTGTCGCTAGATTTCTTCCAAAACTTCCCTGATTTGCATTGA

mRNA sequence

ATGTCTTCTTCTCTTTGTTCTTCAACACCTAATGCCATGGCTGAAAGAAAAGAGGTTCAACTCCAAGGTCCCCGCCCCGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCGGCAAGCCGCCACACCGGCCTGTCATCATCTACTCCGTCTCCCCCAAAGTCATCCACACCGACCCTACTCAATTCAAGGACTTGGTCCAGCGCCTCACTGGCCACAAACCCTCCTCCCATGACTCTCACCATCCACCCAATACGACGATGATTATGAGTACCAATCCTCACGGAGCAGAGAGGGTAGGTCACGGGATATTATCGCCAACGCCGGGGTTGCTGCCGCCGATTCCAGCGAATATTTTCACCCCAACGCCGCCGCAGTCAGCTGAGCTCAGCCCTCTTACCCACTTTTTCCGGGATCTTAGCCCCATAGCTCCCAATCGATTCTCGTTGTCGCTAGATTTCTTCCAAAACTTCCCTGATTTGCATTGA

Coding sequence (CDS)

ATGTCTTCTTCTCTTTGTTCTTCAACACCTAATGCCATGGCTGAAAGAAAAGAGGTTCAACTCCAAGGTCCCCGCCCCGCCGCCCTCAAGATCACCAAAGACTCCCACAAGATCGGCAAGCCGCCACACCGGCCTGTCATCATCTACTCCGTCTCCCCCAAAGTCATCCACACCGACCCTACTCAATTCAAGGACTTGGTCCAGCGCCTCACTGGCCACAAACCCTCCTCCCATGACTCTCACCATCCACCCAATACGACGATGATTATGAGTACCAATCCTCACGGAGCAGAGAGGGTAGGTCACGGGATATTATCGCCAACGCCGGGGTTGCTGCCGCCGATTCCAGCGAATATTTTCACCCCAACGCCGCCGCAGTCAGCTGAGCTCAGCCCTCTTACCCACTTTTTCCGGGATCTTAGCCCCATAGCTCCCAATCGATTCTCGTTGTCGCTAGATTTCTTCCAAAACTTCCCTGATTTGCATTGA

Protein sequence

MSSSLCSSTPNAMAERKEVQLQGPRPAALKITKDSHKIGKPPHRPVIIYSVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNPHGAERVGHGILSPTPGLLPPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSLSLDFFQNFPDLH

Homology

[Close]

BLAST of CmaCh15G006170 vs. Swiss-Prot
Match: MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-10
Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 1


Query: 15 ERKEVQLQGPRPAALKITKDSHKIGKPP-----------------HRPVIIYSVSPKVIH 73
          +++++Q+ GPRP+ L + KDSHKI KPP                   PV+IY+VSPKV+H
Sbjct: 18 QKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVH 77

[Close]

BLAST of CmaCh15G006170 vs. Swiss-Prot
Match: NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.6e-08
Identity = 42/129 (32.56%), Postives = 57/129 (44.19%), Query Frame = 1


Query: 23  GPRPAALKITKDSHKI-------------------------GKPPHRPVIIYSVSPKVIH 82
           GP+P  LK+  DSHKI                          +PP  PV IY+V+P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 83  TDPTQFKDLVQRLTGH-------KPSSHDSHHPPNTTMIMSTNPHGAERVGHGILSPTPG 120
           T P  F  LVQRLTG          SS  +  P +T+ ++ T+        HG++SP   
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDTS--------HGLISPAAR 132

[Close]

BLAST of CmaCh15G006170 vs. Swiss-Prot
Match: VQ20_ARATH (VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 31/67 (46.27%), Postives = 38/67 (56.72%), Query Frame = 1


Query: 24  PRPAALKITKDSHKIGKPP-----------HRPVIIYSVSPKVIHTDPTQFKDLVQRLTG 80
           P P  LK+ KDSH I KPP             PVIIY+ +P++IHT+P  F  LVQ+LTG
Sbjct: 41  PSPPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTG 100

[Close]

BLAST of CmaCh15G006170 vs. Swiss-Prot
Match: VQ8_ARATH (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=VQ8 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.2e-06
Identity = 31/64 (48.44%), Postives = 38/64 (59.38%), Query Frame = 1


Query: 20 QLQGPRPAALKITKDSHKIGKP--------PH---RPVIIYSVSPKVIHTDPTQFKDLVQ 73
          ++ G RP++LK+  +SH I K         PH    PVIIY+ SPKVIHT    F  LVQ
Sbjct: 8  EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQ 67

[Close]

BLAST of CmaCh15G006170 vs. TrEMBL
Match: A0A0A0KI80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338080 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.5e-44
Identity = 110/178 (61.80%), Postives = 125/178 (70.22%), Query Frame = 1


Query: 13  MAERKEVQLQGPRPAALKITKDSHKIGKPP------HRPVIIYSVSPKVIHTDPTQFKDL 72
           M E+KE+QLQGPRP+ALKITKDSHKI KPP      HRPVIIY+VSPK+IHTDPT+FKDL
Sbjct: 1   MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTEFKDL 60

Query: 73  VQRLTGH--KPSS-------HDSHHPPNTTMIMST-----NPHGAER-VGHGILSPTPGL 132
           VQRLTGH   PSS       HD H PP+   I +T     +  G +R + HGILSPTPGL
Sbjct: 61  VQRLTGHHQPPSSSSNHALVHDHHPPPDHISIPTTDDPIDDQAGVDRIIAHGILSPTPGL 120

Query: 133 LPPIPANIFTPTPPQ------SAELSPLTHFFRDLSPIAPNRFSLSLDFF-QNFPDLH 163
           LPPI + IF P PPQ      + +L+ LT FF DLSPIA N FS SLDFF QNFPD H
Sbjct: 121 LPPISSTIFNP-PPQAPAAAAAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH 177

[Close]

BLAST of CmaCh15G006170 vs. TrEMBL
Match: M5VJC3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026048mg PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20
Identity = 81/217 (37.33%), Postives = 104/217 (47.93%), Query Frame = 1


Query: 16  RKEVQLQGPRPAALKITKDSHKIGKPP--------------------HRPVIIYSVSPKV 75
           R+E+QLQGPRP  L++ KDSHKI KPP                     +PVIIY+VSPKV
Sbjct: 10  RRELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSQQPHLYQQPRQPVIIYTVSPKV 69

Query: 76  IHTDPTQFKDLVQRLTG-------HKPSSHDSHHPPN----------TTMIMSTN----- 135
           IHT+P++F DLVQRLTG         P+ ++ ++PPN             +M T+     
Sbjct: 70  IHTNPSEFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNSNNNNSRDDQVMKTSSAQDV 129

Query: 136 PHGAERVGH-----------GILSPTPGLLPPIPANIFTPTPPQSAELSPLTHFFRDLSP 162
             G E  G            GILSP P  L PIP+N F+P         P   FF DLSP
Sbjct: 130 AQGMEMDGDEGGVRQKGLFPGILSPGPASLNPIPSNFFSP---------PSDSFFHDLSP 189

[Close]

BLAST of CmaCh15G006170 vs. TrEMBL
Match: A0A151R6L2_CAJCA (Protein MKS1 OS=Cajanus cajan GN=KK1_040566 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-19
Identity = 81/205 (39.51%), Postives = 96/205 (46.83%), Query Frame = 1


Query: 10  PNAMAERKEVQLQGPRPAALKITKDSHKIGKPP------------HRPVIIYSVSPKVIH 69
           P   + ++E+QLQGPRP  L+I KDSHKI KPP              PVIIY+VSPKVIH
Sbjct: 8   PTRRSPKRELQLQGPRPTPLRINKDSHKIKKPPVAPPPAQPQAPPRLPVIIYTVSPKVIH 67

Query: 70  TDPTQFKDLVQRLTGHKPSSH---------------DSHHPP-------------NTTMI 129
           T P+ F  LVQRLTG   SS                D  H P              TT  
Sbjct: 68  TTPSDFMSLVQRLTGSSSSSSSSSSSDKVATDPLTGDKGHIPVSPAARYAAIEMARTTQS 127

Query: 130 MSTNPH-------GAERVGH-------GILSPTPGLLPPIPANIFTPTPPQSAELSPLTH 160
           +  NP        G E VGH       GILSP P  L PIP+N F+   P S + + +  
Sbjct: 128 IKHNPSENSGDVGGVEIVGHERPNMFHGILSPGPASLSPIPSNFFS---PPSNDPNNMVS 187

[Close]

BLAST of CmaCh15G006170 vs. TrEMBL
Match: K7KLI4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.7e-18
Identity = 69/164 (42.07%), Postives = 80/164 (48.78%), Query Frame = 1


Query: 16  RKEVQLQGPRPAALKITKDSHKIGKPP---------------------HRPVIIYSVSPK 75
           +KEVQLQGPRP  LK++KDSHKI KPP                       PVIIYSVSPK
Sbjct: 83  KKEVQLQGPRPPPLKVSKDSHKIKKPPPHPAHHHHNHPHAPPEQNLQQREPVIIYSVSPK 142

Query: 76  VIHTDPTQFKDLVQRLTG-----HKPSSHDSHHP-PNTTMIMSTNPHGAERVGH------ 133
           VIH  P  F D+VQRLTG     + P+      P      I  T+P   ERV H      
Sbjct: 143 VIHVTPGDFMDVVQRLTGASSGEYPPAGRGDVSPAARLASIEKTSPSERERVLHYKDDDI 202

[Close]

BLAST of CmaCh15G006170 vs. TrEMBL
Match: A0A0R0KB11_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G214700 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.7e-18
Identity = 69/164 (42.07%), Postives = 80/164 (48.78%), Query Frame = 1


Query: 16  RKEVQLQGPRPAALKITKDSHKIGKPP---------------------HRPVIIYSVSPK 75
           +KEVQLQGPRP  LK++KDSHKI KPP                       PVIIYSVSPK
Sbjct: 15  KKEVQLQGPRPPPLKVSKDSHKIKKPPPHPAHHHHNHPHAPPEQNLQQREPVIIYSVSPK 74

Query: 76  VIHTDPTQFKDLVQRLTG-----HKPSSHDSHHP-PNTTMIMSTNPHGAERVGH------ 133
           VIH  P  F D+VQRLTG     + P+      P      I  T+P   ERV H      
Sbjct: 75  VIHVTPGDFMDVVQRLTGASSGEYPPAGRGDVSPAARLASIEKTSPSERERVLHYKDDDI 134

[Close]

BLAST of CmaCh15G006170 vs. TAIR10
Match: AT3G18690.1 (AT3G18690.1 MAP kinase substrate 1)

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-11
Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 1


Query: 15 ERKEVQLQGPRPAALKITKDSHKIGKPP-----------------HRPVIIYSVSPKVIH 73
          +++++Q+ GPRP+ L + KDSHKI KPP                   PV+IY+VSPKV+H
Sbjct: 18 QKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVH 77

[Close]

BLAST of CmaCh15G006170 vs. TAIR10
Match: AT1G21326.1 (AT1G21326.1 VQ motif-containing protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09
Identity = 45/125 (36.00%), Postives = 57/125 (45.60%), Query Frame = 1


Query: 23  GPRPAALKITKDSHKI-------------------------GKPPHRPVIIYSVSPKVIH 82
           GPRP  LK+  DSHKI                          +PP  PVIIY+VSP++IH
Sbjct: 13  GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYTVSPRIIH 72

Query: 83  TDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNPHGAERV---GHGILSPTPGLLPP 120
           T P  F  LVQRLTG   +S  S    ++T    + P  A  +    HG++SP       
Sbjct: 73  THPNNFMTLVQRLTGKTSTSTTSSSYSSST----SAPKDASTMVDTSHGLISPAARFAVT 132

[Close]

BLAST of CmaCh15G006170 vs. TAIR10
Match: AT1G21320.1 (AT1G21320.1 nucleotide binding;nucleic acid binding)

HSP 1 Score: 58.5 bits (140), Expect = 4.3e-09
Identity = 42/129 (32.56%), Postives = 57/129 (44.19%), Query Frame = 1


Query: 23  GPRPAALKITKDSHKI-------------------------GKPPHRPVIIYSVSPKVIH 82
           GP+P  LK+  DSHKI                          +PP  PV IY+V+P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 83  TDPTQFKDLVQRLTGH-------KPSSHDSHHPPNTTMIMSTNPHGAERVGHGILSPTPG 120
           T P  F  LVQRLTG          SS  +  P +T+ ++ T+        HG++SP   
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDTS--------HGLISPAAR 132

[Close]

BLAST of CmaCh15G006170 vs. TAIR10
Match: AT3G18360.1 (AT3G18360.1 VQ motif-containing protein)

HSP 1 Score: 57.8 bits (138), Expect = 7.3e-09
Identity = 31/67 (46.27%), Postives = 38/67 (56.72%), Query Frame = 1


Query: 24  PRPAALKITKDSHKIGKPP-----------HRPVIIYSVSPKVIHTDPTQFKDLVQRLTG 80
           P P  LK+ KDSH I KPP             PVIIY+ +P++IHT+P  F  LVQ+LTG
Sbjct: 41  PSPPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTG 100

[Close]

BLAST of CmaCh15G006170 vs. TAIR10
Match: AT1G68450.1 (AT1G68450.1 VQ motif-containing protein)

HSP 1 Score: 52.0 bits (123), Expect = 4.0e-07
Identity = 31/64 (48.44%), Postives = 38/64 (59.38%), Query Frame = 1


Query: 20 QLQGPRPAALKITKDSHKIGKP--------PH---RPVIIYSVSPKVIHTDPTQFKDLVQ 73
          ++ G RP++LK+  +SH I K         PH    PVIIY+ SPKVIHT    F  LVQ
Sbjct: 8  EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQ 67

[Close]

BLAST of CmaCh15G006170 vs. NCBI nr
Match: gi|449462192|ref|XP_004148825.1| (PREDICTED: protein MKS1-like [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 5.1e-44
Identity = 110/178 (61.80%), Postives = 125/178 (70.22%), Query Frame = 1


Query: 13  MAERKEVQLQGPRPAALKITKDSHKIGKPP------HRPVIIYSVSPKVIHTDPTQFKDL 72
           M E+KE+QLQGPRP+ALKITKDSHKI KPP      HRPVIIY+VSPK+IHTDPT+FKDL
Sbjct: 1   MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTEFKDL 60

Query: 73  VQRLTGH--KPSS-------HDSHHPPNTTMIMST-----NPHGAER-VGHGILSPTPGL 132
           VQRLTGH   PSS       HD H PP+   I +T     +  G +R + HGILSPTPGL
Sbjct: 61  VQRLTGHHQPPSSSSNHALVHDHHPPPDHISIPTTDDPIDDQAGVDRIIAHGILSPTPGL 120

Query: 133 LPPIPANIFTPTPPQ------SAELSPLTHFFRDLSPIAPNRFSLSLDFF-QNFPDLH 163
           LPPI + IF P PPQ      + +L+ LT FF DLSPIA N FS SLDFF QNFPD H
Sbjct: 121 LPPISSTIFNP-PPQAPAAAAAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH 177

[Close]

BLAST of CmaCh15G006170 vs. NCBI nr
Match: gi|659082070|ref|XP_008441652.1| (PREDICTED: protein MKS1-like, partial [Cucumis melo])

HSP 1 Score: 177.9 bits (450), Expect = 1.4e-41
Identity = 104/174 (59.77%), Postives = 120/174 (68.97%), Query Frame = 1


Query: 15  ERKEVQLQGPRPAALKITKDSHKIGKPP------HRPVIIYSVSPKVIHTDPTQFKDLVQ 74
           +++++QLQGPRP+ALKITKDSHKI KPP      HRPVIIY+VSPK+IHTDPTQFKDLVQ
Sbjct: 4   KKRKLQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTQFKDLVQ 63

Query: 75  RLTGH--KPSSHDSH-----HPP------NTTMIMSTNPHGAER-VGHGILSPTPGLLPP 134
           RLTGH   PSS  +H     HPP        T  +     G +R + HGILSPTPGLLPP
Sbjct: 64  RLTGHHQPPSSSSNHALVHDHPPPDPISIPITDAIDDQAGGVDRIIAHGILSPTPGLLPP 123

Query: 135 IPANIFTPTPPQSA-----ELSPLTHFFRDLSPIAPNRFSLSLDFF-QNFPDLH 163
           I   IF+  PPQ+A     +L+ LT FF DLSPI  N FS SLDFF QNFPD H
Sbjct: 124 ISPTIFSTPPPQAAAAATGDLTSLTQFFHDLSPIPANHFSPSLDFFQQNFPDFH 177

[Close]

BLAST of CmaCh15G006170 vs. NCBI nr
Match: gi|470108489|ref|XP_004290549.1| (PREDICTED: protein MKS1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-21
Identity = 87/226 (38.50%), Postives = 103/226 (45.58%), Query Frame = 1


Query: 7   SSTPNAMAERKEVQLQGPRPAALKITKDSHKIGKPP---------------HRPVIIYSV 66
           S  P   + RKE+QLQGPRPA LKI KDSHKI KPP                +PVIIY+V
Sbjct: 4   SDYPTGKSPRKELQLQGPRPAPLKIHKDSHKIKKPPVVPQPSQANQPHQPPRQPVIIYTV 63

Query: 67  SPKVIHTDPTQFKDLVQRLTGHKPS----SHDSHHPPNTTMIMSTNPHGAERVGH----- 126
           SPK+IHT+P+ F +LVQRLTG  PS    S  S  P N     +TN  G E         
Sbjct: 64  SPKIIHTNPSDFMNLVQRLTGLPPSNSSASCSSSSPRNDH--QNTNGGGGESTMEQSRSS 123

Query: 127 ------------------------------GILSPTPGLLPPIPANIFTPTPPQSAELSP 162
                                         GILSP PG LPPIP+N F+P         P
Sbjct: 124 DHEGTMDMDDDHDDRVHDTGLKLQQKGMFPGILSPAPGSLPPIPSNFFSP---------P 183

[Close]

BLAST of CmaCh15G006170 vs. NCBI nr
Match: gi|595792449|ref|XP_007199973.1| (hypothetical protein PRUPE_ppa026048mg [Prunus persica])

HSP 1 Score: 107.8 bits (268), Expect = 1.8e-20
Identity = 81/217 (37.33%), Postives = 104/217 (47.93%), Query Frame = 1


Query: 16  RKEVQLQGPRPAALKITKDSHKIGKPP--------------------HRPVIIYSVSPKV 75
           R+E+QLQGPRP  L++ KDSHKI KPP                     +PVIIY+VSPKV
Sbjct: 10  RRELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSQQPHLYQQPRQPVIIYTVSPKV 69

Query: 76  IHTDPTQFKDLVQRLTG-------HKPSSHDSHHPPN----------TTMIMSTN----- 135
           IHT+P++F DLVQRLTG         P+ ++ ++PPN             +M T+     
Sbjct: 70  IHTNPSEFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNSNNNNSRDDQVMKTSSAQDV 129

Query: 136 PHGAERVGH-----------GILSPTPGLLPPIPANIFTPTPPQSAELSPLTHFFRDLSP 162
             G E  G            GILSP P  L PIP+N F+P         P   FF DLSP
Sbjct: 130 AQGMEMDGDEGGVRQKGLFPGILSPGPASLNPIPSNFFSP---------PSDSFFHDLSP 189

[Close]

BLAST of CmaCh15G006170 vs. NCBI nr
Match: gi|645264333|ref|XP_008237628.1| (PREDICTED: protein MKS1 [Prunus mume])

HSP 1 Score: 107.1 bits (266), Expect = 3.0e-20
Identity = 81/217 (37.33%), Postives = 103/217 (47.47%), Query Frame = 1


Query: 16  RKEVQLQGPRPAALKITKDSHKIGKPP--------------------HRPVIIYSVSPKV 75
           R+E+QLQGPRP  L++ KDSHKI KPP                     +PVIIY+VSPKV
Sbjct: 10  RRELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSHQPHLYQQPRQPVIIYTVSPKV 69

Query: 76  IHTDPTQFKDLVQRLTG-------HKPSSHDSHHPPN----------TTMIMSTN----- 135
           IHT+P+ F DLVQRLTG         P+ ++ ++PPN             +M T+     
Sbjct: 70  IHTNPSDFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNNNNNNSRDDQVMKTSSAQDV 129

Query: 136 PHGAERVGH-----------GILSPTPGLLPPIPANIFTPTPPQSAELSPLTHFFRDLSP 162
             G E  G            GILSP P  L PIP+N F+P         P   FF DLSP
Sbjct: 130 SQGMEMDGDDGGVRQKGLFPGILSPGPASLNPIPSNFFSP---------PSDSFFHDLSP 189

The following BLAST results are available for this feature:

BLAST of CmaCh15G006170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MKS1_ARATH	4.8e-10	42.67	Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2	[more]
NSRB_ARATH	7.6e-08	32.56	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1	[more]
VQ20_ARATH	1.3e-07	46.27	VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1	[more]
VQ8_ARATH	7.2e-06	48.44	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=VQ8 PE=2...	[more]

BLAST of CmaCh15G006170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI80_CUCSA	3.5e-44	61.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338080 PE=4 SV=1	[more]
M5VJC3_PRUPE	1.2e-20	37.33	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026048mg PE=4 SV=1	[more]
A0A151R6L2_CAJCA	1.4e-19	39.51	Protein MKS1 OS=Cajanus cajan GN=KK1_040566 PE=4 SV=1	[more]
K7KLI4_SOYBN	9.7e-18	42.07	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A0A0R0KB11_SOYBN	9.7e-18	42.07	Uncharacterized protein OS=Glycine max GN=GLYMA_04G214700 PE=4 SV=1	[more]

BLAST of CmaCh15G006170 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18690.1	2.7e-11	42.67	MAP kinase substrate 1	[more]
AT1G21326.1	1.5e-09	36.00	VQ motif-containing protein	[more]
AT1G21320.1	4.3e-09	32.56	nucleotide binding;nucleic acid binding	[more]
AT3G18360.1	7.3e-09	46.27	VQ motif-containing protein	[more]
AT1G68450.1	4.0e-07	48.44	VQ motif-containing protein	[more]

BLAST of CmaCh15G006170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462192\|ref\|XP_004148825.1\|	5.1e-44	61.80	PREDICTED: protein MKS1-like [Cucumis sativus]	[more]
gi\|659082070\|ref\|XP_008441652.1\|	1.4e-41	59.77	PREDICTED: protein MKS1-like, partial [Cucumis melo]	[more]
gi\|470108489\|ref\|XP_004290549.1\|	2.1e-21	38.50	PREDICTED: protein MKS1 [Fragaria vesca subsp. vesca]	[more]
gi\|595792449\|ref\|XP_007199973.1\|	1.8e-20	37.33	hypothetical protein PRUPE_ppa026048mg [Prunus persica]	[more]
gi\|645264333\|ref\|XP_008237628.1\|	3.0e-20	37.33	PREDICTED: protein MKS1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G006170.1	CmaCh15G006170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 52..72 score: 6.9
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 7..72 score: 4.9
None	No IPR available	PANTHER	PTHR33143:SF5	SUBFAMILY NOT NAMED	coord: 7..72 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G006170	Cucsa.077000	Cucumber (Gy14) v1	cgycmaB0130
CmaCh15G006170	Cla013849	Watermelon (97103) v1	cmawmB260
CmaCh15G006170	Csa6G338080	Cucumber (Chinese Long) v2	cmacuB311
CmaCh15G006170	MELO3C008398	Melon (DHL92) v3.5.1	cmameB268
CmaCh15G006170	ClCG08G006550	Watermelon (Charleston Gray)	cmawcgB273
CmaCh15G006170	CSPI06G18010	Wild cucumber (PI 183967)	cmacpiB317
CmaCh15G006170	CmoCh04G025470	Cucurbita moschata (Rifu)	cmacmoB309
CmaCh15G006170	CmoCh15G006210	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G006170	Lsi08G005310	Bottle gourd (USVL1VR-Ls)	cmalsiB294
CmaCh15G006170	Cp4.1LG13g04200	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G006170	Cp4.1LG01g21070	Cucurbita pepo (Zucchini)	cmacpeB318
CmaCh15G006170	MELO3C008398.2	Melon (DHL92) v3.6.1	cmamedB307
CmaCh15G006170	CsaV3_6G030890	Cucumber (Chinese Long) v3	cmacucB0365
CmaCh15G006170	Cla97C08G149360	Watermelon (97103) v2	cmawmbB319
CmaCh15G006170	Bhi04G001408	Wax gourd	cmawgoB0391
CmaCh15G006170	CsGy6G017490	Cucumber (Gy14) v2	cgybcmaB743
CmaCh15G006170	Carg01590	Silver-seed gourd	carcmaB1148
CmaCh15G006170	Carg15779	Silver-seed gourd	carcmaB0087

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh15G006170	CmaCh04G024300	Cucurbita maxima (Rimu)	cmacmaB325

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G006170	Cucumber (Chinese Long) v3	cmacucB0370
CmaCh15G006170	Watermelon (97103) v2	cmawmbB323
CmaCh15G006170	Cucumber (Gy14) v1	cgycmaB0135
CmaCh15G006170	Cucurbita moschata (Rifu)	cmacmoB283
CmaCh15G006170	Cucumber (Chinese Long) v2	cmacuB317
CmaCh15G006170	Watermelon (Charleston Gray)	cmawcgB245
CmaCh15G006170	Watermelon (97103) v1	cmawmB253
CmaCh15G006170	Cucurbita pepo (Zucchini)	cmacpeB335
CmaCh15G006170	Bottle gourd (USVL1VR-Ls)	cmalsiB273
CmaCh15G006170	Cucumber (Gy14) v2	cgybcmaB917