CmoCh04G025470 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G025470
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	VQ motif protein
Location	Cmo_Chr04 : 18683438 .. 18683911 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAAGAAAACACCTTCAACTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCGAAAAGCCGCCGCCGCCGCAGCACCGCCCCGTCATAATCTACACCGACTCCCCCAAGATCATCCACACCAATCCTACCCAATTTAAGGACTTAGTCCAACGCCTCACTGGCTGCCAACCTGATACTCCTGACATTCATCAGGTCCAATCCAAGACAATATCAATGTCTATGTCGATGCCAACGAGTAGTACCGAACAAGGAGTCGAGAGTGTAGGTTGTTTCCCAACTGGGATATTACCTCCGACGTCGGAGTTGCTACTACCCATTATGCCAATGCCGCCATCGGCGTCAACGGATCTCAGCTCTCTCACCCACTACTTCCAAGACAGCTCCATAGCTCCTAATAATTTTGCATCGTCGCTAGATTTCTTCGATAACTTCCCTCATTTTCATTAA

mRNA sequence

ATGGCTGAAAGAAAACACCTTCAACTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCGAAAAGCCGCCGCCGCCGCAGCACCGCCCCGTCATAATCTACACCGACTCCCCCAAGATCATCCACACCAATCCTACCCAATTTAAGGACTTAGTCCAACGCCTCACTGGCTGCCAACCTGATACTCCTGACATTCATCAGGTCCAATCCAAGACAATATCAATGTCTATGTCGATGCCAACGAGTAGTACCGAACAAGGAGTCGAGAGTGTAGGTTGTTTCCCAACTGGGATATTACCTCCGACGTCGGAGTTGCTACTACCCATTATGCCAATGCCGCCATCGGCGTCAACGGATCTCAGCTCTCTCACCCACTACTTCCAAGACAGCTCCATAGCTCCTAATAATTTTGCATCGTCGCTAGATTTCTTCGATAACTTCCCTCATTTTCATTAA

Coding sequence (CDS)

ATGGCTGAAAGAAAACACCTTCAACTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCGAAAAGCCGCCGCCGCCGCAGCACCGCCCCGTCATAATCTACACCGACTCCCCCAAGATCATCCACACCAATCCTACCCAATTTAAGGACTTAGTCCAACGCCTCACTGGCTGCCAACCTGATACTCCTGACATTCATCAGGTCCAATCCAAGACAATATCAATGTCTATGTCGATGCCAACGAGTAGTACCGAACAAGGAGTCGAGAGTGTAGGTTGTTTCCCAACTGGGATATTACCTCCGACGTCGGAGTTGCTACTACCCATTATGCCAATGCCGCCATCGGCGTCAACGGATCTCAGCTCTCTCACCCACTACTTCCAAGACAGCTCCATAGCTCCTAATAATTTTGCATCGTCGCTAGATTTCTTCGATAACTTCCCTCATTTTCATTAA

Homology

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BLAST of CmoCh04G025470 vs. Swiss-Prot
Match: VQ20_ARATH (VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08
Identity = 37/89 (41.57%), Postives = 49/89 (55.06%), Query Frame = 1


Query: 14  PSALKISKHSHNIEKPPPPQ--------HRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQ 73
           P  LK++K SH I+KPP P           PVIIYT +P+IIHTNP  F  LVQ+LTG  
Sbjct: 43  PPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTGMT 102

Query: 74  PDTPDIHQVQS-------KTISMSMSMPT 88
               D+    +       K+I+ ++S PT
Sbjct: 103 HSDEDLGGGNAMTDPGVVKSINRTVSEPT 131

[Close]

BLAST of CmoCh04G025470 vs. Swiss-Prot
Match: MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07
Identity = 51/172 (29.65%), Postives = 77/172 (44.77%), Query Frame = 1


Query: 3   ERKHLQLHGHRPSALKISKHSHNIEKPP----PPQHR----------PVIIYTDSPKIIH 62
           +++ LQ+ G RPS L + K SH I+KPP    PP +R          PV+IY  SPK++H
Sbjct: 18  QKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVH 77

Query: 63  TNPTQFKDLVQRLTGCQPD-----------TPDIHQVQSKTISMSMSMPTSSTEQGVE-- 122
              ++F ++VQRLTG               +P      ++  S       ++ ++ VE  
Sbjct: 78  ATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLASTENASPRGGKEPAARDETVEIN 137

Query: 123 -------SVGCFPTGILPPTSELLLPIMPMPPSASTDLSSLTHYFQDSSIAP 141
                    G +  GIL P+  LL       P+AST + S   Y Q    +P
Sbjct: 138 TAMEEAAEFGGYAPGILSPSPALL-------PTASTGIFS-PMYHQGGMFSP 181

[Close]

BLAST of CmoCh04G025470 vs. Swiss-Prot
Match: VQ8_ARATH (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=VQ8 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.3e-07
Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 1


Query: 8  QLHGHRPSALKISKHSHNIEKP------PPPQHR--PVIIYTDSPKIIHTNPTQFKDLVQ 64
          +++G RPS+LK++  SH I+K       P P  R  PVIIY  SPK+IHT    F  LVQ
Sbjct: 8  EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQ 67

[Close]

BLAST of CmoCh04G025470 vs. TrEMBL
Match: A0A0A0KI80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338080 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-26
Identity = 91/177 (51.41%), Postives = 110/177 (62.15%), Query Frame = 1


Query: 1   MAERKHLQLHGHRPSALKISKHSHNIEKPP--PPQ-HRPVIIYTDSPKIIHTNPTQFKDL 60
           M E+K LQL G RPSALKI+K SH I+KPP  PPQ HRPVIIYT SPKIIHT+PT+FKDL
Sbjct: 1   MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTEFKDL 60

Query: 61  VQRLTG-CQPDTPDI-------HQVQSKTISMSMSMPTSSTEQGVESVGCF----PT-GI 120
           VQRLTG  QP +          H      IS+  +      + GV+ +       PT G+
Sbjct: 61  VQRLTGHHQPPSSSSNHALVHDHHPPPDHISIPTTDDPIDDQAGVDRIIAHGILSPTPGL 120

Query: 121 LPPTSELLLPIMPMPPSAST--DLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPHFH 158
           LPP S  +    P  P+A+   DL+SLT +F D S IA N+F+SSLDFF  NFP FH
Sbjct: 121 LPPISSTIFNPPPQAPAAAAAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH 177

[Close]

BLAST of CmoCh04G025470 vs. TrEMBL
Match: M5VJC3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026048mg PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.3e-13
Identity = 77/207 (37.20%), Postives = 97/207 (46.86%), Query Frame = 1


Query: 4   RKHLQLHGHRPSALKISKHSHNIEKPP--------PPQHRP---------VIIYTDSPKI 63
           R+ LQL G RP+ L++ K SH I+KPP        PP  +P         VIIYT SPK+
Sbjct: 10  RRELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSQQPHLYQQPRQPVIIYTVSPKV 69

Query: 64  IHTNPTQFKDLVQRLTGC------------QPDTP-------------DIHQVQSKTISM 123
           IHTNP++F DLVQRLTG              P+ P             D     S    +
Sbjct: 70  IHTNPSEFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNSNNNNSRDDQVMKTSSAQDV 129

Query: 124 SMSMPTSSTEQGVESVGCFPTGILPPTSELLLPIMP---MPPSAS--TDLSSLTH----Y 155
           +  M     E GV   G FP GIL P    L PI      PPS S   DLS + H    +
Sbjct: 130 AQGMEMDGDEGGVRQKGLFP-GILSPGPASLNPIPSNFFSPPSDSFFHDLSPVLHGNRNF 189

[Close]

BLAST of CmoCh04G025470 vs. TrEMBL
Match: A0A0L9UFX9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g163700 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 4  RKHLQLHGHRPSALKISKHSHNIEKPP---------PPQHRPVIIYTDSPKIIHTNPTQF 63
          R+ LQL G RP+ L+I+K SH I+KPP         PP  +P+IIYT SPK+IHT P+ F
Sbjct: 14 RRELQLQGPRPTPLRINKDSHKIKKPPLPPQPSHPQPPPRQPIIIYTVSPKVIHTTPSDF 73

[Close]

BLAST of CmoCh04G025470 vs. TrEMBL
Match: A0A0S3RDK1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G150400 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 4   RKHLQLHGHRPSALKISKHSHNIEKPP---------PPQHRPVIIYTDSPKIIHTNPTQF 63
           R+ LQL G RP+ L+I+K SH I+KPP         PP  +P+IIYT SPK+IHT P+ F
Sbjct: 35  RRELQLQGPRPTPLRINKDSHKIKKPPLPPQPSHPQPPPRQPIIIYTVSPKVIHTTPSDF 94

[Close]

BLAST of CmoCh04G025470 vs. TrEMBL
Match: K7KUQ0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G124400 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-10
Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 1


Query: 4  RKHLQLHGHRPSALKISKHSHNIEKPP----------PPQHRPVIIYTDSPKIIHTNPTQ 63
          R+ LQL G RP+ L+I+K SH I+KPP          PP  +P+IIYT SPK+IHT P+ 
Sbjct: 16 RRELQLQGPRPTPLRINKDSHKIKKPPLAPQPSHPHQPPPRQPIIIYTVSPKVIHTTPSD 75

[Close]

BLAST of CmoCh04G025470 vs. TAIR10
Match: AT3G18360.1 (AT3G18360.1 VQ motif-containing protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09
Identity = 37/89 (41.57%), Postives = 49/89 (55.06%), Query Frame = 1


Query: 14  PSALKISKHSHNIEKPPPPQ--------HRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQ 73
           P  LK++K SH I+KPP P           PVIIYT +P+IIHTNP  F  LVQ+LTG  
Sbjct: 43  PPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTGMT 102

Query: 74  PDTPDIHQVQS-------KTISMSMSMPT 88
               D+    +       K+I+ ++S PT
Sbjct: 103 HSDEDLGGGNAMTDPGVVKSINRTVSEPT 131

[Close]

BLAST of CmoCh04G025470 vs. TAIR10
Match: AT3G18690.1 (AT3G18690.1 MAP kinase substrate 1)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-08
Identity = 51/172 (29.65%), Postives = 77/172 (44.77%), Query Frame = 1


Query: 3   ERKHLQLHGHRPSALKISKHSHNIEKPP----PPQHR----------PVIIYTDSPKIIH 62
           +++ LQ+ G RPS L + K SH I+KPP    PP +R          PV+IY  SPK++H
Sbjct: 18  QKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVH 77

Query: 63  TNPTQFKDLVQRLTGCQPD-----------TPDIHQVQSKTISMSMSMPTSSTEQGVE-- 122
              ++F ++VQRLTG               +P      ++  S       ++ ++ VE  
Sbjct: 78  ATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLASTENASPRGGKEPAARDETVEIN 137

Query: 123 -------SVGCFPTGILPPTSELLLPIMPMPPSASTDLSSLTHYFQDSSIAP 141
                    G +  GIL P+  LL       P+AST + S   Y Q    +P
Sbjct: 138 TAMEEAAEFGGYAPGILSPSPALL-------PTASTGIFS-PMYHQGGMFSP 181

[Close]

BLAST of CmoCh04G025470 vs. TAIR10
Match: AT1G68450.1 (AT1G68450.1 VQ motif-containing protein)

HSP 1 Score: 55.5 bits (132), Expect = 3.5e-08
Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 1


Query: 8  QLHGHRPSALKISKHSHNIEKP------PPPQHR--PVIIYTDSPKIIHTNPTQFKDLVQ 64
          +++G RPS+LK++  SH I+K       P P  R  PVIIY  SPK+IHT    F  LVQ
Sbjct: 8  EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQ 67

[Close]

BLAST of CmoCh04G025470 vs. TAIR10
Match: AT1G21326.1 (AT1G21326.1 VQ motif-containing protein)

HSP 1 Score: 51.6 bits (122), Expect = 5.1e-07
Identity = 39/101 (38.61%), Postives = 45/101 (44.55%), Query Frame = 1


Query: 11  GHRPSALKISKHSHNIEKPPP----------------------PQHRPVIIYTDSPKIIH 70
           G RP  LK+   SH I K PP                      P   PVIIYT SP+IIH
Sbjct: 13  GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYTVSPRIIH 72

Query: 71  TNPTQFKDLVQRLTGCQPDTPDIHQVQSKTISMSMSMPTSS 90
           T+P  F  LVQRLTG         +  + T S S S  TS+
Sbjct: 73  THPNNFMTLVQRLTG---------KTSTSTTSSSYSSSTSA 104

[Close]

BLAST of CmoCh04G025470 vs. TAIR10
Match: AT1G21320.1 (AT1G21320.1 nucleotide binding;nucleic acid binding)

HSP 1 Score: 49.3 bits (116), Expect = 2.5e-06
Identity = 37/100 (37.00%), Postives = 44/100 (44.00%), Query Frame = 1


Query: 11  GHRPSALKISKHSHNIEKPPP----------------------PQHRPVIIYTDSPKIIH 70
           G +P+ LK+   SH I K PP                      P   PV IYT +P+IIH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 71  TNPTQFKDLVQRLTGCQPDTPDIHQVQSKTISMSMSMPTS 89
           T+P  F  LVQRLTG         Q  + T S S S  TS
Sbjct: 73  THPNNFMTLVQRLTG---------QTSTSTTSSSSSSSTS 103

[Close]

BLAST of CmoCh04G025470 vs. NCBI nr
Match: gi|449462192|ref|XP_004148825.1| (PREDICTED: protein MKS1-like [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 4.6e-26
Identity = 91/177 (51.41%), Postives = 110/177 (62.15%), Query Frame = 1


Query: 1   MAERKHLQLHGHRPSALKISKHSHNIEKPP--PPQ-HRPVIIYTDSPKIIHTNPTQFKDL 60
           M E+K LQL G RPSALKI+K SH I+KPP  PPQ HRPVIIYT SPKIIHT+PT+FKDL
Sbjct: 1   MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTEFKDL 60

Query: 61  VQRLTG-CQPDTPDI-------HQVQSKTISMSMSMPTSSTEQGVESVGCF----PT-GI 120
           VQRLTG  QP +          H      IS+  +      + GV+ +       PT G+
Sbjct: 61  VQRLTGHHQPPSSSSNHALVHDHHPPPDHISIPTTDDPIDDQAGVDRIIAHGILSPTPGL 120

Query: 121 LPPTSELLLPIMPMPPSAST--DLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPHFH 158
           LPP S  +    P  P+A+   DL+SLT +F D S IA N+F+SSLDFF  NFP FH
Sbjct: 121 LPPISSTIFNPPPQAPAAAAAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH 177

[Close]

BLAST of CmoCh04G025470 vs. NCBI nr
Match: gi|659082070|ref|XP_008441652.1| (PREDICTED: protein MKS1-like, partial [Cucumis melo])

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-24
Identity = 89/176 (50.57%), Postives = 107/176 (60.80%), Query Frame = 1


Query: 3   ERKHLQLHGHRPSALKISKHSHNIEKPP--PPQ-HRPVIIYTDSPKIIHTNPTQFKDLVQ 62
           +++ LQL G RPSALKI+K SH I+KPP  PPQ HRPVIIYT SPKIIHT+PTQFKDLVQ
Sbjct: 4   KKRKLQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTQFKDLVQ 63

Query: 63  RLTGCQ--PDTPDIHQV-----QSKTISMSMSMPTSSTEQGVESVGCFPTGILPPTSELL 122
           RLTG    P +   H +         IS+ ++        GV+ +     GIL PT  LL
Sbjct: 64  RLTGHHQPPSSSSNHALVHDHPPPDPISIPITDAIDDQAGGVDRI--IAHGILSPTPGLL 123

Query: 123 LPIMPM-----PPSAST----DLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPHFH 158
            PI P      PP A+     DL+SLT +F D S I  N+F+ SLDFF  NFP FH
Sbjct: 124 PPISPTIFSTPPPQAAAAATGDLTSLTQFFHDLSPIPANHFSPSLDFFQQNFPDFH 177

[Close]

BLAST of CmoCh04G025470 vs. NCBI nr
Match: gi|645264333|ref|XP_008237628.1| (PREDICTED: protein MKS1 [Prunus mume])

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-13
Identity = 78/207 (37.68%), Postives = 97/207 (46.86%), Query Frame = 1


Query: 4   RKHLQLHGHRPSALKISKHSHNIEKPP--------PPQHRP---------VIIYTDSPKI 63
           R+ LQL G RP+ L++ K SH I+KPP        PP H+P         VIIYT SPK+
Sbjct: 10  RRELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSHQPHLYQQPRQPVIIYTVSPKV 69

Query: 64  IHTNPTQFKDLVQRLTGC------------QPDTP-------------DIHQVQSKTISM 123
           IHTNP+ F DLVQRLTG              P+ P             D     S    +
Sbjct: 70  IHTNPSDFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNNNNNNSRDDQVMKTSSAQDV 129

Query: 124 SMSMPTSSTEQGVESVGCFPTGILPPTSELLLPIMP---MPPSAS--TDLSSLTH----Y 155
           S  M     + GV   G FP GIL P    L PI      PPS S   DLS + H    +
Sbjct: 130 SQGMEMDGDDGGVRQKGLFP-GILSPGPASLNPIPSNFFSPPSDSFFHDLSPVLHGNRNF 189

[Close]

BLAST of CmoCh04G025470 vs. NCBI nr
Match: gi|595792449|ref|XP_007199973.1| (hypothetical protein PRUPE_ppa026048mg [Prunus persica])

HSP 1 Score: 82.4 bits (202), Expect = 7.6e-13
Identity = 77/207 (37.20%), Postives = 97/207 (46.86%), Query Frame = 1


Query: 4   RKHLQLHGHRPSALKISKHSHNIEKPP--------PPQHRP---------VIIYTDSPKI 63
           R+ LQL G RP+ L++ K SH I+KPP        PP  +P         VIIYT SPK+
Sbjct: 10  RRELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSQQPHLYQQPRQPVIIYTVSPKV 69

Query: 64  IHTNPTQFKDLVQRLTGC------------QPDTP-------------DIHQVQSKTISM 123
           IHTNP++F DLVQRLTG              P+ P             D     S    +
Sbjct: 70  IHTNPSEFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNSNNNNSRDDQVMKTSSAQDV 129

Query: 124 SMSMPTSSTEQGVESVGCFPTGILPPTSELLLPIMP---MPPSAS--TDLSSLTH----Y 155
           +  M     E GV   G FP GIL P    L PI      PPS S   DLS + H    +
Sbjct: 130 AQGMEMDGDEGGVRQKGLFP-GILSPGPASLNPIPSNFFSPPSDSFFHDLSPVLHGNRNF 189

[Close]

BLAST of CmoCh04G025470 vs. NCBI nr
Match: gi|657944194|ref|XP_008373255.1| (PREDICTED: protein MKS1 [Malus domestica])

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-11
Identity = 75/216 (34.72%), Postives = 96/216 (44.44%), Query Frame = 1


Query: 4   RKHLQLHGHRPSALKISKHSHNIEKPP-------------PPQH-----RPVIIYTDSPK 63
           R+ LQL G RP+ LKI K SH I+KPP              P H     +PVIIYT SPK
Sbjct: 10  RRELQLQGPRPTPLKIHKDSHKIKKPPVVPQPSQLPNQQQQPHHYQQPRQPVIIYTVSPK 69

Query: 64  IIHTNPTQFKDLVQRLTGCQPDT----------------PDIHQVQSKTISMSMSMPTSS 123
           +IHTNP++F DLVQRLTG  P                  P+     +        M  +S
Sbjct: 70  VIHTNPSEFMDLVQRLTGLPPSNSSTTSSSPPRNNNIHPPNYVNYNNPPAHDDQGMKKTS 129

Query: 124 TEQGVE-----------------SVGCFPTGILPPTSELLLPI-----MPMPPSASTDLS 156
           T Q V                    G FP GIL P    L PI      P   S   DLS
Sbjct: 130 TAQDVVEEMEIMDGGGGGDGGVKQKGLFP-GILSPGPASLTPIPSNFFSPPADSFFHDLS 189

The following BLAST results are available for this feature:

BLAST of CmoCh04G025470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VQ20_ARATH	2.5e-08	41.57	VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1	[more]
MKS1_ARATH	2.2e-07	29.65	Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2	[more]
VQ8_ARATH	6.3e-07	50.00	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=VQ8 PE=2...	[more]

BLAST of CmoCh04G025470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI80_CUCSA	3.2e-26	51.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338080 PE=4 SV=1	[more]
M5VJC3_PRUPE	5.3e-13	37.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026048mg PE=4 SV=1	[more]
A0A0L9UFX9_PHAAN	1.1e-10	55.07	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g163700 PE=4 SV=1	[more]
A0A0S3RDK1_PHAAN	1.1e-10	55.07	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G150400 PE=...	[more]
K7KUQ0_SOYBN	1.5e-10	54.29	Uncharacterized protein OS=Glycine max GN=GLYMA_06G124400 PE=4 SV=1	[more]

BLAST of CmoCh04G025470 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18360.1	1.4e-09	41.57	VQ motif-containing protein	[more]
AT3G18690.1	1.2e-08	29.65	MAP kinase substrate 1	[more]
AT1G68450.1	3.5e-08	50.00	VQ motif-containing protein	[more]
AT1G21326.1	5.1e-07	38.61	VQ motif-containing protein	[more]
AT1G21320.1	2.5e-06	37.00	nucleotide binding;nucleic acid binding	[more]

BLAST of CmoCh04G025470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462192\|ref\|XP_004148825.1\|	4.6e-26	51.41	PREDICTED: protein MKS1-like [Cucumis sativus]	[more]
gi\|659082070\|ref\|XP_008441652.1\|	1.9e-24	50.57	PREDICTED: protein MKS1-like, partial [Cucumis melo]	[more]
gi\|645264333\|ref\|XP_008237628.1\|	1.5e-13	37.68	PREDICTED: protein MKS1 [Prunus mume]	[more]
gi\|595792449\|ref\|XP_007199973.1\|	7.6e-13	37.20	hypothetical protein PRUPE_ppa026048mg [Prunus persica]	[more]
gi\|657944194\|ref\|XP_008373255.1\|	1.9e-11	34.72	PREDICTED: protein MKS1 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G025470.1	CmoCh04G025470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 43..66 score: 1.5
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 4..63 score: 4.7
None	No IPR available	PANTHER	PTHR33143:SF5	SUBFAMILY NOT NAMED	coord: 4..63 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G025470	Cucsa.077000	Cucumber (Gy14) v1	cgycmoB0128
CmoCh04G025470	CmaCh15G006170	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G025470	CmaCh04G024300	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G025470	Cla013849	Watermelon (97103) v1	cmowmB661
CmoCh04G025470	Csa6G338080	Cucumber (Chinese Long) v2	cmocuB762
CmoCh04G025470	ClCG08G006550	Watermelon (Charleston Gray)	cmowcgB680
CmoCh04G025470	CSPI06G18010	Wild cucumber (PI 183967)	cmocpiB771
CmoCh04G025470	Lsi08G005310	Bottle gourd (USVL1VR-Ls)	cmolsiB697
CmoCh04G025470	Cp4.1LG13g04200	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G025470	Cp4.1LG01g21070	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G025470	CsaV3_6G030890	Cucumber (Chinese Long) v3	cmocucB0902
CmoCh04G025470	Cla97C08G149360	Watermelon (97103) v2	cmowmbB760
CmoCh04G025470	Bhi04G001408	Wax gourd	cmowgoB0865
CmoCh04G025470	CsGy6G017490	Cucumber (Gy14) v2	cgybcmoB819
CmoCh04G025470	Carg15779	Silver-seed gourd	carcmoB0094
CmoCh04G025470	Carg01590	Silver-seed gourd	carcmoB1121

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G025470	CmoCh15G006210	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G025470	Cucumber (Gy14) v1	cgycmoB0137
CmoCh04G025470	Cucumber (Chinese Long) v2	cmocuB771
CmoCh04G025470	Melon (DHL92) v3.5.1	cmomeB672
CmoCh04G025470	Watermelon (Charleston Gray)	cmowcgB605
CmoCh04G025470	Cucurbita pepo (Zucchini)	cmocpeB708
CmoCh04G025470	Bottle gourd (USVL1VR-Ls)	cmolsiB643
CmoCh04G025470	Cucumber (Gy14) v2	cgybcmoB950
CmoCh04G025470	Melon (DHL92) v3.6.1	cmomedB760
CmoCh04G025470	Cucumber (Chinese Long) v3	cmocucB0911
CmoCh04G025470	Watermelon (97103) v2	cmowmbB770
CmoCh04G025470	Cucurbita moschata (Rifu)	cmocmoB029
CmoCh04G025470	Cucurbita moschata (Rifu)	cmocmoB367