Cp4.1LG01g21070 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g21070
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionVQ motif-containing protein, putative
LocationCp4.1LG01 : 17809037 .. 17809507 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAAAGAAAACACCTTCACCTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCAAAAAGCCGCCACCGCTCCCCCCGCCACCGCCGCAGCACCGCCCCGTCATAATCTATACCGACTCCCCCAAGATCATCCACACCAATCCTACCCAATTCAAGGACTTAGTCCAACGCCTCACTGGCTACCAACCTAATAGCCCTGACATTCATCAAGTCCAATCCAAGACAATATCAATGTCTACATCGATGCCAACGAGTAGTACCGAACAAGGAGTGGAGAGTCTAAGTCGTTTCCCAACTGGGATATTATCGCCGACGCCGGAGTTTCTACCGCCGTCGGCGTCAACGGATCTCAGCTCTCTCACCCACTACTTCCAAGACAGTTCTATAGCTCCGAATAATTTTGCATCGTCGCTAGATTTCTTCGATAACTTCCCTGATTTTCATTAA

mRNA sequence

ATGGCTGAAAGAAAACACCTTCACCTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCAAAAAGCCGCCACCGCTCCCCCCGCCACCGCCGCAGCACCGCCCCGTCATAATCTATACCGACTCCCCCAAGATCATCCACACCAATCCTACCCAATTCAAGGACTTAGTCCAACGCCTCACTGGCTACCAACCTAATAGCCCTGACATTCATCAAGTCCAATCCAAGACAATATCAATGTCTACATCGATGCCAACGAGTAGTACCGAACAAGGAGTGGAGAGTCTAAGTCGTTTCCCAACTGGGATATTATCGCCGACGCCGGAGTTTCTACCGCCGTCGGCGTCAACGGATCTCAGCTCTCTCACCCACTACTTCCAAGACAGTTCTATAGCTCCGAATAATTTTGCATCGTCGCTAGATTTCTTCGATAACTTCCCTGATTTTCATTAA

Coding sequence (CDS)

ATGGCTGAAAGAAAACACCTTCACCTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCAAAAAGCCGCCACCGCTCCCCCCGCCACCGCCGCAGCACCGCCCCGTCATAATCTATACCGACTCCCCCAAGATCATCCACACCAATCCTACCCAATTCAAGGACTTAGTCCAACGCCTCACTGGCTACCAACCTAATAGCCCTGACATTCATCAAGTCCAATCCAAGACAATATCAATGTCTACATCGATGCCAACGAGTAGTACCGAACAAGGAGTGGAGAGTCTAAGTCGTTTCCCAACTGGGATATTATCGCCGACGCCGGAGTTTCTACCGCCGTCGGCGTCAACGGATCTCAGCTCTCTCACCCACTACTTCCAAGACAGTTCTATAGCTCCGAATAATTTTGCATCGTCGCTAGATTTCTTCGATAACTTCCCTGATTTTCATTAA

Protein sequence

MAERKHLHLHGHRPSALKISKHSHNIKKPPPLPPPPPQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGYQPNSPDIHQVQSKTISMSTSMPTSSTEQGVESLSRFPTGILSPTPEFLPPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
Homology
[Close]
BLAST of Cp4.1LG01g21070 vs. Swiss-Prot
Match: MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 7.9e-10
Identity = 48/157 (30.57%), Postives = 72/157 (45.86%), Query Frame = 1 

Query: 3   ERKHLHLHGHRPSALKISKHSHNIKKPPPLPPPPPQH---------RPVIIYTDSPKIIH 62
           +++ L + G RPS L + K SH IKKPP  P PPP            PV+IY  SPK++H
Sbjct: 18  QKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVH 77

Query: 63  TNPTQFKDLVQRLTGYQPN-----------SPDIHQVQSKTISMSTSMPTSSTEQGVE-- 122
              ++F ++VQRLTG               SP      ++  S       ++ ++ VE  
Sbjct: 78  ATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLASTENASPRGGKEPAARDETVEIN 137

Query: 123 -------SLSRFPTGILSPTPEFLPPSASTDLSSLTH 131
                      +  GILSP+P  LP +++   S + H
Sbjct: 138 TAMEEAAEFGGYAPGILSPSPALLPTASTGIFSPMYH 174

[Close]
BLAST of Cp4.1LG01g21070 vs. Swiss-Prot
Match: NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 45/123 (36.59%), Postives = 59/123 (47.97%), Query Frame = 1 

Query: 11  GHRPSALKISKHSHNIKKPPPLPPPPPQHRP-----------------VIIYTDSPKIIH 70
           G +P+ LK+   SH I K PPL PP PQ +P                 V IYT +P+IIH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 71  TNPTQFKDLVQRLTGYQPNSPDIHQVQSKTISMSTSMPTSSTEQGVESLSRFPTGILSPT 117
           T+P  F  LVQRLTG         Q  + T S S+S  TS  +    ++     G++SP 
Sbjct: 73  THPNNFMTLVQRLTG---------QTSTSTTSSSSSSSTSEPKD-TSTMVDTSHGLISPA 125

[Close]
BLAST of Cp4.1LG01g21070 vs. Swiss-Prot
Match: VQ20_ARATH (VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.2e-07
Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 1 

Query: 14  PSALKISKHSHNIKKPPP----LPPPPPQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGY 73
           P  LK++K SH IKKPP          P+H PVIIYT +P+IIHTNP  F  LVQ+LTG 
Sbjct: 43  PPTLKVNKDSHVIKKPPSPSSFSSAAKPRH-PVIIYTHTPRIIHTNPKDFMALVQKLTGM 102

Query: 74  QPNSPDIHQVQS-------KTISMSTSMPT 93
             +  D+    +       K+I+ + S PT
Sbjct: 103 THSDEDLGGGNAMTDPGVVKSINRTVSEPT 131

[Close]
BLAST of Cp4.1LG01g21070 vs. TrEMBL
Match: A0A0A0KI80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338080 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 8.1e-30
Identity = 98/181 (54.14%), Postives = 113/181 (62.43%), Query Frame = 1 

Query: 1   MAERKHLHLHGHRPSALKISKHSHNIKKPPPLPPPPPQHRPVIIYTDSPKIIHTNPTQFK 60
           M E+K L L G RPSALKI+K SH IKKPP LPPP P HRPVIIYT SPKIIHT+PT+FK
Sbjct: 1   MPEKKELQLQGPRPSALKITKDSHKIKKPP-LPPPQP-HRPVIIYTVSPKIIHTDPTEFK 60

Query: 61  DLVQRLTG-YQPNSPDI-------HQVQSKTISMSTSMPTSSTEQGVESLSRFPTGILSP 120
           DLVQRLTG +QP S          H      IS+ T+      + GV+ +     GILSP
Sbjct: 61  DLVQRLTGHHQPPSSSSNHALVHDHHPPPDHISIPTTDDPIDDQAGVDRI--IAHGILSP 120

Query: 121 TPEFLPPSAST---------------DLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDF 157
           TP  LPP +ST               DL+SLT +F D S IA N+F+SSLDFF  NFPDF
Sbjct: 121 TPGLLPPISSTIFNPPPQAPAAAAAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDF 177

[Close]
BLAST of Cp4.1LG01g21070 vs. TrEMBL
Match: M5VJC3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026048mg PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-14
Identity = 81/208 (38.94%), Postives = 101/208 (48.56%), Query Frame = 1 

Query: 4   RKHLHLHGHRPSALKISKHSHNIKKPPPLPPPPPQ------------HRPVIIYTDSPKI 63
           R+ L L G RP+ L++ K SH IKKPP +P P  Q             +PVIIYT SPK+
Sbjct: 10  RRELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSQQPHLYQQPRQPVIIYTVSPKV 69

Query: 64  IHTNPTQFKDLVQRLTGY------------QPNSPDIHQVQSKTIS-----MSTS----- 123
           IHTNP++F DLVQRLTG              PN+P  +   +   S     M TS     
Sbjct: 70  IHTNPSEFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNSNNNNSRDDQVMKTSSAQDV 129

Query: 124 ---MPTSSTEQGVESLSRFPTGILSPTPE---------FLPPSAS--TDLSSLTH----Y 155
              M     E GV     FP GILSP P          F PPS S   DLS + H    +
Sbjct: 130 AQGMEMDGDEGGVRQKGLFP-GILSPGPASLNPIPSNFFSPPSDSFFHDLSPVLHGNRNF 189

[Close]
BLAST of Cp4.1LG01g21070 vs. TrEMBL
Match: A0A078EDV4_BRANA (BnaC05g34410D protein OS=Brassica napus GN=BnaC05g34410D PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-11
Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 1 

Query: 3   ERKHLHLHGHRPSALKISKHSHNIKKPPPLPPPPPQH------------RPVIIYTDSPK 62
           +++ L ++G RPS L + K SH IKKPP  P PPPQH             PV+IY  SPK
Sbjct: 18  QKRQLQIYGPRPSPLSVHKDSHKIKKPPKHPAPPPQHHHRDQAPVYAPREPVVIYAVSPK 77

Query: 63  IIHTNPTQFKDLVQRLTGYQP-------NSPDIHQVQSKTISMSTS-----MPTSSTEQG 122
           ++HT  + F ++VQRLTG          N  D+        + + S      PT++ E+ 
Sbjct: 78  VVHTTTSDFMNVVQRLTGISAGVFHESGNGGDVSPAARLAATENASPRGGKEPTAAKEET 137

[Close]
BLAST of Cp4.1LG01g21070 vs. TrEMBL
Match: A0A0D3CIS3_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-11
Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 1 

Query: 3   ERKHLHLHGHRPSALKISKHSHNIKKPPPLPPPPPQH------------RPVIIYTDSPK 62
           +++ L ++G RPS L + K SH IKKPP  P PPPQH             PV+IY  SPK
Sbjct: 18  QKRQLQIYGPRPSPLSVHKDSHKIKKPPKHPAPPPQHHHRDQAPVYAPREPVVIYAVSPK 77

Query: 63  IIHTNPTQFKDLVQRLTGYQP-------NSPDIHQVQSKTISMSTS-----MPTSSTEQG 122
           ++HT  + F ++VQRLTG          N  D+        + + S      PT++ E+ 
Sbjct: 78  VVHTTTSDFMNVVQRLTGISAGVFHESGNGGDVSPAARLAATENASPRGGKEPTAAKEET 137

[Close]
BLAST of Cp4.1LG01g21070 vs. TrEMBL
Match: V7AY52_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G136500g PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.9e-11
Identity = 42/74 (56.76%), Postives = 50/74 (67.57%), Query Frame = 1 

Query: 4   RKHLHLHGHRPSALKISKHSHNIKKPPPLPPP----PPQHRPVIIYTDSPKIIHTNPTQF 63
           R+ L L G RP+ L+ISK SH IKKPP  P P    PP  +P+IIYT SPK+IHT P  F
Sbjct: 50  RRELQLQGPRPTPLRISKDSHKIKKPPLAPQPSHPQPPPRQPIIIYTVSPKVIHTTPNDF 109

Query: 64  KDLVQRLTGYQPNS 74
            +LVQRLTG   +S
Sbjct: 110 MNLVQRLTGSSSSS 123

[Close]
BLAST of Cp4.1LG01g21070 vs. TAIR10
Match: AT3G18690.1 (AT3G18690.1 MAP kinase substrate 1)

HSP 1 Score: 65.1 bits (157), Expect = 4.4e-11
Identity = 48/157 (30.57%), Postives = 72/157 (45.86%), Query Frame = 1 

Query: 3   ERKHLHLHGHRPSALKISKHSHNIKKPPPLPPPPPQH---------RPVIIYTDSPKIIH 62
           +++ L + G RPS L + K SH IKKPP  P PPP            PV+IY  SPK++H
Sbjct: 18  QKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVH 77

Query: 63  TNPTQFKDLVQRLTGYQPN-----------SPDIHQVQSKTISMSTSMPTSSTEQGVE-- 122
              ++F ++VQRLTG               SP      ++  S       ++ ++ VE  
Sbjct: 78  ATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLASTENASPRGGKEPAARDETVEIN 137

Query: 123 -------SLSRFPTGILSPTPEFLPPSASTDLSSLTH 131
                      +  GILSP+P  LP +++   S + H
Sbjct: 138 TAMEEAAEFGGYAPGILSPSPALLPTASTGIFSPMYH 174

[Close]
BLAST of Cp4.1LG01g21070 vs. TAIR10
Match: AT1G21326.1 (AT1G21326.1 VQ motif-containing protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 48/123 (39.02%), Postives = 59/123 (47.97%), Query Frame = 1 

Query: 11  GHRPSALKISKHSHNIKKPPPLPPPPPQHRP-----------------VIIYTDSPKIIH 70
           G RP  LK+   SH I K PPL PP PQ +P                 VIIYT SP+IIH
Sbjct: 13  GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYTVSPRIIH 72

Query: 71  TNPTQFKDLVQRLTGYQPNSPDIHQVQSKTISMSTSMPTSSTEQGVESLSRFPTGILSPT 117
           T+P  F  LVQRLTG    S       S + S STS P  ++     ++     G++SP 
Sbjct: 73  THPNNFMTLVQRLTGKTSTS-----TTSSSYSSSTSAPKDAS-----TMVDTSHGLISPA 125

[Close]
BLAST of Cp4.1LG01g21070 vs. TAIR10
Match: AT1G21320.1 (AT1G21320.1 nucleotide binding;nucleic acid binding)

HSP 1 Score: 57.8 bits (138), Expect = 7.1e-09
Identity = 45/123 (36.59%), Postives = 59/123 (47.97%), Query Frame = 1 

Query: 11  GHRPSALKISKHSHNIKKPPPLPPPPPQHRP-----------------VIIYTDSPKIIH 70
           G +P+ LK+   SH I K PPL PP PQ +P                 V IYT +P+IIH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 71  TNPTQFKDLVQRLTGYQPNSPDIHQVQSKTISMSTSMPTSSTEQGVESLSRFPTGILSPT 117
           T+P  F  LVQRLTG         Q  + T S S+S  TS  +    ++     G++SP 
Sbjct: 73  THPNNFMTLVQRLTG---------QTSTSTTSSSSSSSTSEPKD-TSTMVDTSHGLISPA 125

[Close]
BLAST of Cp4.1LG01g21070 vs. TAIR10
Match: AT3G18360.1 (AT3G18360.1 VQ motif-containing protein)

HSP 1 Score: 55.5 bits (132), Expect = 3.5e-08
Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 1 

Query: 14  PSALKISKHSHNIKKPPP----LPPPPPQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGY 73
           P  LK++K SH IKKPP          P+H PVIIYT +P+IIHTNP  F  LVQ+LTG 
Sbjct: 43  PPTLKVNKDSHVIKKPPSPSSFSSAAKPRH-PVIIYTHTPRIIHTNPKDFMALVQKLTGM 102

Query: 74  QPNSPDIHQVQS-------KTISMSTSMPT 93
             +  D+    +       K+I+ + S PT
Sbjct: 103 THSDEDLGGGNAMTDPGVVKSINRTVSEPT 131

[Close]
BLAST of Cp4.1LG01g21070 vs. TAIR10
Match: AT1G68450.1 (AT1G68450.1 VQ motif-containing protein)

HSP 1 Score: 51.2 bits (121), Expect = 6.6e-07
Identity = 44/121 (36.36%), Postives = 56/121 (46.28%), Query Frame = 1 

Query: 9   LHGHRPSALKISKHSHNIKKPPPLPPPPPQH---RPVIIYTDSPKIIHTNPTQFKDLVQR 68
           ++G RPS+LK++  SH IKK       P  H    PVIIY  SPK+IHT    F  LVQR
Sbjct: 9   INGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQR 68

Query: 69  LTGYQPNSPDIHQVQSKTISMSTSMPTSSTEQGVE------SLSRFPTGILSPTPEFLPP 121
           LTG          ++  T   S+S+ T     G +      S  R     L+  P F P 
Sbjct: 69  LTGLD------EIIRRNTSESSSSVVTEEVNVGDDNTAAPFSQDRTQRQKLTDMPLFTPS 123

[Close]
BLAST of Cp4.1LG01g21070 vs. NCBI nr
Match: gi|449462192|ref|XP_004148825.1| (PREDICTED: protein MKS1-like [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29
Identity = 98/181 (54.14%), Postives = 113/181 (62.43%), Query Frame = 1 

Query: 1   MAERKHLHLHGHRPSALKISKHSHNIKKPPPLPPPPPQHRPVIIYTDSPKIIHTNPTQFK 60
           M E+K L L G RPSALKI+K SH IKKPP LPPP P HRPVIIYT SPKIIHT+PT+FK
Sbjct: 1   MPEKKELQLQGPRPSALKITKDSHKIKKPP-LPPPQP-HRPVIIYTVSPKIIHTDPTEFK 60

Query: 61  DLVQRLTG-YQPNSPDI-------HQVQSKTISMSTSMPTSSTEQGVESLSRFPTGILSP 120
           DLVQRLTG +QP S          H      IS+ T+      + GV+ +     GILSP
Sbjct: 61  DLVQRLTGHHQPPSSSSNHALVHDHHPPPDHISIPTTDDPIDDQAGVDRI--IAHGILSP 120

Query: 121 TPEFLPPSAST---------------DLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDF 157
           TP  LPP +ST               DL+SLT +F D S IA N+F+SSLDFF  NFPDF
Sbjct: 121 TPGLLPPISSTIFNPPPQAPAAAAAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDF 177

[Close]
BLAST of Cp4.1LG01g21070 vs. NCBI nr
Match: gi|659082070|ref|XP_008441652.1| (PREDICTED: protein MKS1-like, partial [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-26
Identity = 91/178 (51.12%), Postives = 109/178 (61.24%), Query Frame = 1 

Query: 3   ERKHLHLHGHRPSALKISKHSHNIKKPPPLPPPPPQHRPVIIYTDSPKIIHTNPTQFKDL 62
           +++ L L G RPSALKI+K SH IKKPP LPPP P HRPVIIYT SPKIIHT+PTQFKDL
Sbjct: 4   KKRKLQLQGPRPSALKITKDSHKIKKPP-LPPPQP-HRPVIIYTVSPKIIHTDPTQFKDL 63

Query: 63  VQRLTGYQ--PNSPDIHQV-----QSKTISMSTSMPTSSTEQGVESLSRFPTGILSPTPE 122
           VQRLTG+   P+S   H +         IS+  +        GV+ +     GILSPTP 
Sbjct: 64  VQRLTGHHQPPSSSSNHALVHDHPPPDPISIPITDAIDDQAGGVDRI--IAHGILSPTPG 123

Query: 123 FLPP---------------SASTDLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDFH 157
            LPP               +A+ DL+SLT +F D S I  N+F+ SLDFF  NFPDFH
Sbjct: 124 LLPPISPTIFSTPPPQAAAAATGDLTSLTQFFHDLSPIPANHFSPSLDFFQQNFPDFH 177

[Close]
BLAST of Cp4.1LG01g21070 vs. NCBI nr
Match: gi|645264333|ref|XP_008237628.1| (PREDICTED: protein MKS1 [Prunus mume])

HSP 1 Score: 89.4 bits (220), Expect = 6.2e-15
Identity = 81/208 (38.94%), Postives = 100/208 (48.08%), Query Frame = 1 

Query: 4   RKHLHLHGHRPSALKISKHSHNIKKPPPLPPP---PPQHRP---------VIIYTDSPKI 63
           R+ L L G RP+ L++ K SH IKKPP +P P   PP H+P         VIIYT SPK+
Sbjct: 10  RRELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSHQPHLYQQPRQPVIIYTVSPKV 69

Query: 64  IHTNPTQFKDLVQRLTGY------------QPNSP-------------DIHQVQSKTISM 123
           IHTNP+ F DLVQRLTG              PN+P             D     S    +
Sbjct: 70  IHTNPSDFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNNNNNNSRDDQVMKTSSAQDV 129

Query: 124 STSMPTSSTEQGVESLSRFPTGILSPTPE---------FLPPSAS--TDLSSLTH----Y 155
           S  M     + GV     FP GILSP P          F PPS S   DLS + H    +
Sbjct: 130 SQGMEMDGDDGGVRQKGLFP-GILSPGPASLNPIPSNFFSPPSDSFFHDLSPVLHGNRNF 189

[Close]
BLAST of Cp4.1LG01g21070 vs. NCBI nr
Match: gi|595792449|ref|XP_007199973.1| (hypothetical protein PRUPE_ppa026048mg [Prunus persica])

HSP 1 Score: 87.4 bits (215), Expect = 2.4e-14
Identity = 81/208 (38.94%), Postives = 101/208 (48.56%), Query Frame = 1 

Query: 4   RKHLHLHGHRPSALKISKHSHNIKKPPPLPPPPPQ------------HRPVIIYTDSPKI 63
           R+ L L G RP+ L++ K SH IKKPP +P P  Q             +PVIIYT SPK+
Sbjct: 10  RRELQLQGPRPTPLRVHKDSHKIKKPPIVPQPSSQPPSQQPHLYQQPRQPVIIYTVSPKV 69

Query: 64  IHTNPTQFKDLVQRLTGY------------QPNSPDIHQVQSKTIS-----MSTS----- 123
           IHTNP++F DLVQRLTG              PN+P  +   +   S     M TS     
Sbjct: 70  IHTNPSEFMDLVQRLTGLNSSSSSSPPTQNNPNNPPNYDNSNNNNSRDDQVMKTSSAQDV 129

Query: 124 ---MPTSSTEQGVESLSRFPTGILSPTPE---------FLPPSAS--TDLSSLTH----Y 155
              M     E GV     FP GILSP P          F PPS S   DLS + H    +
Sbjct: 130 AQGMEMDGDEGGVRQKGLFP-GILSPGPASLNPIPSNFFSPPSDSFFHDLSPVLHGNRNF 189

[Close]
BLAST of Cp4.1LG01g21070 vs. NCBI nr
Match: gi|657944194|ref|XP_008373255.1| (PREDICTED: protein MKS1 [Malus domestica])

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-12
Identity = 77/215 (35.81%), Postives = 100/215 (46.51%), Query Frame = 1 

Query: 4   RKHLHLHGHRPSALKISKHSHNIKKPPPLPPPP--------PQH-----RPVIIYTDSPK 63
           R+ L L G RP+ LKI K SH IKKPP +P P         P H     +PVIIYT SPK
Sbjct: 10  RRELQLQGPRPTPLKIHKDSHKIKKPPVVPQPSQLPNQQQQPHHYQQPRQPVIIYTVSPK 69

Query: 64  IIHTNPTQFKDLVQRLTGYQPNS----------------PDIHQVQSKTISMSTSMPTSS 123
           +IHTNP++F DLVQRLTG  P++                P+     +        M  +S
Sbjct: 70  VIHTNPSEFMDLVQRLTGLPPSNSSTTSSSPPRNNNIHPPNYVNYNNPPAHDDQGMKKTS 129

Query: 124 TEQ-----------------GVESLSRFPTGILSPTPEFLPPSAST-----------DLS 154
           T Q                 GV+    FP GILSP P  L P  S            DLS
Sbjct: 130 TAQDVVEEMEIMDGGGGGDGGVKQKGLFP-GILSPGPASLTPIPSNFFSPPADSFFHDLS 189

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g21070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MKS1_ARATH7.9e-1030.57Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2[more]
NSRB_ARATH1.3e-0736.59Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1[more]
VQ20_ARATH6.2e-0743.33VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1[more]
BLAST of Cp4.1LG01g21070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI80_CUCSA8.1e-3054.14Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338080 PE=4 SV=1[more]
M5VJC3_PRUPE1.6e-1438.94Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026048mg PE=4 SV=1[more]
A0A078EDV4_BRANA1.0e-1135.29BnaC05g34410D protein OS=Brassica napus GN=BnaC05g34410D PE=4 SV=1[more]
A0A0D3CIS3_BRAOL1.0e-1135.29Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
V7AY52_PHAVU2.9e-1156.76Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G136500g PE=4 SV=1[more]
BLAST of Cp4.1LG01g21070 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18690.14.4e-1130.57 MAP kinase substrate 1[more]
AT1G21326.11.1e-0939.02 VQ motif-containing protein[more]
AT1G21320.17.1e-0936.59 nucleotide binding;nucleic acid binding[more]
AT3G18360.13.5e-0843.33 VQ motif-containing protein[more]
AT1G68450.16.6e-0736.36 VQ motif-containing protein[more]
BLAST of Cp4.1LG01g21070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462192|ref|XP_004148825.1|1.2e-2954.14PREDICTED: protein MKS1-like [Cucumis sativus][more]
gi|659082070|ref|XP_008441652.1|3.5e-2651.12PREDICTED: protein MKS1-like, partial [Cucumis melo][more]
gi|645264333|ref|XP_008237628.1|6.2e-1538.94PREDICTED: protein MKS1 [Prunus mume][more]
gi|595792449|ref|XP_007199973.1|2.4e-1438.94hypothetical protein PRUPE_ppa026048mg [Prunus persica][more]
gi|657944194|ref|XP_008373255.1|1.3e-1235.81PREDICTED: protein MKS1 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008889VQ
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g21070.1Cp4.1LG01g21070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 48..68
score: 8.4
NoneNo IPR availablePANTHERPTHR33143FAMILY NOT NAMEDcoord: 4..68
score: 8.5
NoneNo IPR availablePANTHERPTHR33143:SF5SUBFAMILY NOT NAMEDcoord: 4..68
score: 8.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g21070Cucsa.077000Cucumber (Gy14) v1cgycpeB0128
Cp4.1LG01g21070CmaCh15G006170Cucurbita maxima (Rimu)cmacpeB318
Cp4.1LG01g21070CmaCh04G024300Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g21070CmoCh04G025470Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g21070CmoCh15G006210Cucurbita moschata (Rifu)cmocpeB280
Cp4.1LG01g21070Cla013849Watermelon (97103) v1cpewmB393
Cp4.1LG01g21070Csa6G338080Cucumber (Chinese Long) v2cpecuB463
Cp4.1LG01g21070ClCG08G006550Watermelon (Charleston Gray)cpewcgB415
Cp4.1LG01g21070CSPI06G18010Wild cucumber (PI 183967)cpecpiB464
Cp4.1LG01g21070Lsi08G005310Bottle gourd (USVL1VR-Ls)cpelsiB382
Cp4.1LG01g21070CsaV3_6G030890Cucumber (Chinese Long) v3cpecucB0572
Cp4.1LG01g21070Bhi04G001408Wax gourdcpewgoB0533
Cp4.1LG01g21070CsGy6G017490Cucumber (Gy14) v2cgybcpeB801
Cp4.1LG01g21070Carg01590Silver-seed gourdcarcpeB1158
Cp4.1LG01g21070Carg15779Silver-seed gourdcarcpeB0096
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g21070Cp4.1LG13g04200Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g21070Cucumber (Chinese Long) v3cpecucB0584
Cp4.1LG01g21070Cucurbita pepo (Zucchini)cpecpeB404
Cp4.1LG01g21070Cucumber (Gy14) v1cgycpeB0136
Cp4.1LG01g21070Cucurbita moschata (Rifu)cmocpeB014
Cp4.1LG01g21070Cucumber (Chinese Long) v2cpecuB473
Cp4.1LG01g21070Bottle gourd (USVL1VR-Ls)cpelsiB338
Cp4.1LG01g21070Melon (DHL92) v3.5.1cpemeB401
Cp4.1LG01g21070Cucumber (Gy14) v2cgybcpeB943
Cp4.1LG01g21070Melon (DHL92) v3.6.1cpemedB466