Carg15779 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15779
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein MKS1-like
Location	Cucurbita_argyrosperma_scaffold_055 : 300903 .. 301391 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAAGAAAACACCTTCAACTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCAAAAAGCCGCCGCCGCTCCCCCCGCCACCGCTGCAGCACCGCCCCGTCATAATCTACACCGACTCTCCCAAGATCATCCACACCAATCCTACCCAATTCAAGGACTTAGTCCAACGCCTCACTGGTTGCCAACTTGATACTCCTGACATTCATCAGGTCCAATCCAAGACAATATCAATGTCTATGTCGATGCCAACGAGTAGTACCGAACAAGGAGTCGAGAGTGTAGGTCGTTTCCCAACTGGGATATTACCTCCGACGTCGGAGTTGTTACCGCCCATTATGCCGACGCTGCCATCGACGTCAATGGATCTCAGCTCTCTCACCCACTACTTCCAAGATAGCTCCATAGCTCCTAATAATTTTGCATCGTCGCTAGATTTCTTCGATAACTTCCCTGATTTTCATTAA

mRNA sequence

ATGGCTGAAAGAAAACACCTTCAACTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCAAAAAGCCGCCGCCGCTCCCCCCGCCACCGCTGCAGCACCGCCCCGTCATAATCTACACCGACTCTCCCAAGATCATCCACACCAATCCTACCCAATTCAAGGACTTAGTCCAACGCCTCACTGGTTGCCAACTTGATACTCCTGACATTCATCAGGTCCAATCCAAGACAATATCAATGTCTATGTCGATGCCAACGAGTAGTACCGAACAAGGAGTCGAGAGTGTAGGTCGTTTCCCAACTGGGATATTACCTCCGACGTCGGAGTTGTTACCGCCCATTATGCCGACGCTGCCATCGACGTCAATGGATCTCAGCTCTCTCACCCACTACTTCCAAGATAGCTCCATAGCTCCTAATAATTTTGCATCGTCGCTAGATTTCTTCGATAACTTCCCTGATTTTCATTAA

Coding sequence (CDS)

ATGGCTGAAAGAAAACACCTTCAACTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCAAAAAGCCGCCGCCGCTCCCCCCGCCACCGCTGCAGCACCGCCCCGTCATAATCTACACCGACTCTCCCAAGATCATCCACACCAATCCTACCCAATTCAAGGACTTAGTCCAACGCCTCACTGGTTGCCAACTTGATACTCCTGACATTCATCAGGTCCAATCCAAGACAATATCAATGTCTATGTCGATGCCAACGAGTAGTACCGAACAAGGAGTCGAGAGTGTAGGTCGTTTCCCAACTGGGATATTACCTCCGACGTCGGAGTTGTTACCGCCCATTATGCCGACGCTGCCATCGACGTCAATGGATCTCAGCTCTCTCACCCACTACTTCCAAGATAGCTCCATAGCTCCTAATAATTTTGCATCGTCGCTAGATTTCTTCGATAACTTCCCTGATTTTCATTAA

Protein sequence

MAERKHLQLHGHRPSALKISKHSHNIKKPPPLPPPPLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVESVGRFPTGILPPTSELLPPIMPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH

Homology

[Close]

BLAST of Carg15779 vs. NCBI nr
Match: XP_022959576.1 (protein MKS1-like [Cucurbita moschata])

HSP 1 Score: 277.3 bits (708), Expect = 3.3e-71
Identity = 145/162 (89.51%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MAERKHLQLHGHRPSALKISKHSHNIKKPXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFK 60
           MAERKHLQLHGHRPSALKISKHSHNI+KP        QHRPVIIYTDSPKIIHTNPTQFK
Sbjct: 1   MAERKHLQLHGHRPSALKISKHSHNIEKPPPP-----QHRPVIIYTDSPKIIHTNPTQFK 60

Query: 61  DLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVESVGRFPTGILPPTSELLPPI 120
           DLVQRLTGCQ DTPDIHQVQSKTISMSMSMPTSSTEQGVESVG FPTGILPPTSELL PI
Sbjct: 61  DLVQRLTGCQPDTPDIHQVQSKTISMSMSMPTSSTEQGVESVGCFPTGILPPTSELLLPI 120

Query: 121 MPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH 163
           MP  PS S DLSSLTHYFQDSSIAPNNFASSLDFFDNFP FH
Sbjct: 121 MPMPPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPHFH 157

[Close]

BLAST of Carg15779 vs. NCBI nr
Match: XP_023542758.1 (protein MKS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242.3 bits (617), Expect = 1.2e-60
Identity = 136/162 (83.95%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 1   MAERKHLQLHGHRPSALKISKHSHNIKKPXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFK 60
           MAERKHL LHGHRPSALKISKHSHNI   XXXXXXX    PVIIYTDSPKIIHTNPTQFK
Sbjct: 1   MAERKHLHLHGHRPSALKISKHSHNIXXXXXXXXXXXXXXPVIIYTDSPKIIHTNPTQFK 60

Query: 61  DLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVESVGRFPTGILPPTSELLPPI 120
           DLVQRLTG Q ++PDIHQVQSKTISMS SMPTSSTEQGVES+ RFPTGIL PT E LP  
Sbjct: 61  DLVQRLTGYQPNSPDIHQVQSKTISMSTSMPTSSTEQGVESLSRFPTGILSPTPEFLP-- 120

Query: 121 MPTLPSTSMDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH 163
               PS S DLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
Sbjct: 121 ----PSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH 156

[Close]

BLAST of Carg15779 vs. NCBI nr
Match: XP_023551504.1 (protein MKS1-like [Cucurbita pepo subsp. pepo] >XP_023551505.1 protein MKS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32
Identity = 93/167 (55.69%), Postives = 108/167 (64.67%), Query Frame = 0


Query: 1   MAERKHLQLHGHRPSALKISKHSHNIKKPXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFK 60
           MAERK +QL G RP+ALKI+K SH I KP         HRPVIIYT SPK+IHT+PTQFK
Sbjct: 1   MAERKEVQLQGPRPAALKITKDSHKIGKP--------PHRPVIIYTVSPKVIHTDPTQFK 60

Query: 61  DLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVESVGRFPTGILPPTSELLPPI 120
           DLVQRLTG +  + D H   + T+ M      S+  QG E VG    GIL PT  LLPPI
Sbjct: 61  DLVQRLTGHKPSSHDSHHSPNTTMIM------STNHQGAERVGH---GILSPTPGLLPPI 120

Query: 121 MPTL----PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH 163
              +    P  S +LS LTH+F+D S IAPN F+SSLDFF NFPD H
Sbjct: 121 PTNIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH 150

[Close]

BLAST of Carg15779 vs. NCBI nr
Match: XP_022939148.1 (protein MKS1-like [Cucurbita moschata])

HSP 1 Score: 147.9 bits (372), Expect = 3.0e-32
Identity = 93/167 (55.69%), Postives = 107/167 (64.07%), Query Frame = 0


Query: 1   MAERKHLQLHGHRPSALKISKHSHNIKKPXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFK 60
           MAERK LQL G RP+ALKI+K SH I KP         HRPVIIYT SPK+IHT+PTQFK
Sbjct: 1   MAERKELQLQGPRPAALKITKDSHKIGKP--------PHRPVIIYTVSPKVIHTDPTQFK 60

Query: 61  DLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVESVGRFPTGILPPTSELLPPI 120
           DLVQRLTG +  + D H   + T+ M      S+  QG E VG    GIL PT  LLPPI
Sbjct: 61  DLVQRLTGHKPSSHDSHHPPNTTMIM------STNHQGTERVGH---GILSPTPGLLPPI 120

Query: 121 MPTL----PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH 163
              +    P  S +LS LTH+F+D S IAPN F+ SLDFF NFPD H
Sbjct: 121 PANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSLSLDFFQNFPDLH 150

[Close]

BLAST of Carg15779 vs. NCBI nr
Match: XP_022993351.1 (protein MKS1-like [Cucurbita maxima])

HSP 1 Score: 142.9 bits (359), Expect = 9.6e-31
Identity = 90/167 (53.89%), Postives = 106/167 (63.47%), Query Frame = 0


Query: 1   MAERKHLQLHGHRPSALKISKHSHNIKKPXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFK 60
           MAERK +QL G RP+ALKI+K SH I KP         HRPVIIY+ SPK+IHT+PTQFK
Sbjct: 1   MAERKEVQLQGPRPAALKITKDSHKIGKP--------PHRPVIIYSVSPKVIHTDPTQFK 60

Query: 61  DLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVESVGRFPTGILPPTSELLPPI 120
           DLVQRLTG +  + D H   + T+ M      S+   G E VG    GIL PT  LLPPI
Sbjct: 61  DLVQRLTGHKPSSHDSHHPPNTTMIM------STNPHGAERVGH---GILSPTPGLLPPI 120

Query: 121 MPTL----PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH 163
              +    P  S +LS LTH+F+D S IAPN F+ SLDFF NFPD H
Sbjct: 121 PANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSLSLDFFQNFPDLH 150

[Close]

BLAST of Carg15779 vs. TAIR10
Match: AT1G68450.1 (VQ motif-containing protein)

HSP 1 Score: 57.4 bits (137), Expect = 9.6e-09
Identity = 31/64 (48.44%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 8  QLHGHRPSALKISKHSHNIKKPXXXXXXXLQH---RPVIIYTDSPKIIHTNPTQFKDLVQ 67
          +++G RPS+LK++  SH IKK          H    PVIIY  SPK+IHT    F  LVQ
Sbjct: 8  EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQ 67

Query: 68 RLTG 69
          RLTG
Sbjct: 68 RLTG 71

[Close]

BLAST of Carg15779 vs. TAIR10
Match: AT3G18690.1 (MAP kinase substrate 1)

HSP 1 Score: 54.7 bits (130), Expect = 6.2e-08
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 3  ERKHLQLHGHRPSALKISKHSHNIKKP---------XXXXXXXLQHRPVIIYTDSPKIIH 62
          +++ LQ+ G RPS L + K SH IKKP         XXXXXXX    PV+IY  SPK++H
Sbjct: 18 QKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAXXXXXXXXXXXXXXXPVVIYAVSPKVVH 77

Query: 63 TNPTQFKDLVQRLTG 69
             ++F ++VQRLTG
Sbjct: 78 ATASEFMNVVQRLTG 92

[Close]

BLAST of Carg15779 vs. TAIR10
Match: AT3G18360.1 (VQ motif-containing protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 35/86 (40.70%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 17  LKISKHSHNIKK---PXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDT 76
           LK++K SH IKK   P           PVIIYT +P+IIHTNP  F  LVQ+LTG     
Sbjct: 46  LKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSD 105

Query: 77  PDIHQVQS-------KTISMSMSMPT 93
            D+    +       K+I+ ++S PT
Sbjct: 106 EDLGGGNAMTDPGVVKSINRTVSEPT 131

[Close]

BLAST of Carg15779 vs. TAIR10
Match: AT1G21326.1 (VQ motif-containing protein)

HSP 1 Score: 46.6 bits (109), Expect = 1.7e-05
Identity = 33/75 (44.00%), Postives = 36/75 (48.00%), Query Frame = 0


Query: 11 GHRPSALKISKHSHN-IKKPXXXXXXXLQHR----------------PVIIYTDSPKIIH 69
          G RP  LK+   SH  IKKP      X                    PVIIYT SP+IIH
Sbjct: 13 GPRPIPLKVRGDSHKIIKKPPLAPPHXXXXXXXXXXXXXXXXXXXPGPVIIYTVSPRIIH 72

[Close]

BLAST of Carg15779 vs. TAIR10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding)

HSP 1 Score: 42.7 bits (99), Expect = 2.4e-04
Identity = 36/75 (48.00%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 11 GHRPSALKISKHSHN-IKKP----------------XXXXXXXLQHRPVIIYTDSPKIIH 69
          G +P+ LK+   SH  IKKP                XXXXXXX    PV IYT +P+IIH
Sbjct: 13 GPKPTPLKVRGDSHKIIKKPPLAPPHXXXXXXXXXXXXXXXXXXXXXPVNIYTVTPRIIH 72

[Close]

BLAST of Carg15779 vs. Swiss-Prot
Match: sp|Q9CA36|VQ8_ARATH (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-07
Identity = 31/64 (48.44%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 8  QLHGHRPSALKISKHSHNIKKPXXXXXXXLQH---RPVIIYTDSPKIIHTNPTQFKDLVQ 67
          +++G RPS+LK++  SH IKK          H    PVIIY  SPK+IHT    F  LVQ
Sbjct: 8  EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQ 67

Query: 68 RLTG 69
          RLTG
Sbjct: 68 RLTG 71

[Close]

BLAST of Carg15779 vs. Swiss-Prot
Match: sp|Q8LGD5|MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 3  ERKHLQLHGHRPSALKISKHSHNIKKP---------XXXXXXXLQHRPVIIYTDSPKIIH 62
          +++ LQ+ G RPS L + K SH IKKP         XXXXXXX    PV+IY  SPK++H
Sbjct: 18 QKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAXXXXXXXXXXXXXXXPVVIYAVSPKVVH 77

Query: 63 TNPTQFKDLVQRLTG 69
             ++F ++VQRLTG
Sbjct: 78 ATASEFMNVVQRLTG 92

[Close]

BLAST of Carg15779 vs. Swiss-Prot
Match: sp|Q9LS54|VQ20_ARATH (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-06
Identity = 35/86 (40.70%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 17  LKISKHSHNIKK---PXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLTGCQLDT 76
           LK++K SH IKK   P           PVIIYT +P+IIHTNP  F  LVQ+LTG     
Sbjct: 46  LKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSD 105

Query: 77  PDIHQVQS-------KTISMSMSMPT 93
            D+    +       K+I+ ++S PT
Sbjct: 106 EDLGGGNAMTDPGVVKSINRTVSEPT 131

[Close]

BLAST of Carg15779 vs. TrEMBL
Match: tr|A0A0A0KI80|A0A0A0KI80_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G338080 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.8e-25
Identity = 88/181 (48.62%), Postives = 105/181 (58.01%), Query Frame = 0


Query: 1   MAERKHLQLHGHRPSALKISKHSHNIKKPXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFK 60
           M E+K LQL G RPSALKI+K SH IKKP         HRPVIIYT SPKIIHT+PT+FK
Sbjct: 1   MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPPQ--PHRPVIIYTVSPKIIHTDPTEFK 60

Query: 61  DLVQRLTG----CQLDTPDIHQVQSKTISMSMSMPTS----STEQGVESVGRFPTGILPP 120
           DLVQRLTG                       +S+PT+      + GV+ +     GIL P
Sbjct: 61  DLVQRLTGHXXXXXXXXXXXXXXXXXXXXXHISIPTTDDPIDDQAGVDRI--IAHGILSP 120

Query: 121 TSELLPPIMPTL---------PSTSMDLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDF 163
           T  LLPPI  T+          + + DL+SLT +F D S IA N+F+SSLDFF  NFPDF
Sbjct: 121 TPGLLPPISSTIFNPPPQAPAAAAAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDF 177

[Close]

BLAST of Carg15779 vs. TrEMBL
Match: tr|A0A1S3B4N1|A0A1S3B4N1_CUCME (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103485735 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-24
Identity = 90/183 (49.18%), Postives = 108/183 (59.02%), Query Frame = 0


Query: 3   ERKHLQLHGHRPSALKISKHSHNIKKPXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFKDL 62
           +++ LQL G RPSALKI+K SH IKKP         HRPVIIYT SPKIIHT+PTQFKDL
Sbjct: 35  KKRKLQLQGPRPSALKITKDSHKIKKPPLPPPQ--PHRPVIIYTVSPKIIHTDPTQFKDL 94

Query: 63  VQRLTGCQLDTPDIHQVQSKTISMSM----------SMP-TSSTEQGVESVGR-FPTGIL 122
           VQRLTG        HQ  S + + ++          S+P T + +     V R    GIL
Sbjct: 95  VQRLTG-------HHQPPSSSSNHALVHDHPPPDPISIPITDAIDDQAGGVDRIIAHGIL 154

Query: 123 PPTSELLPPIMPTLPST---------SMDLSSLTHYFQD-SSIAPNNFASSLDFF-DNFP 163
            PT  LLPPI PT+ ST         + DL+SLT +F D S I  N+F+ SLDFF  NFP
Sbjct: 155 SPTPGLLPPISPTIFSTPPPQAAAAATGDLTSLTQFFHDLSPIPANHFSPSLDFFQQNFP 208

[Close]

BLAST of Carg15779 vs. TrEMBL
Match: tr|A0A2R6RNX5|A0A2R6RNX5_ACTCH (Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04997 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 9.5e-11
Identity = 70/200 (35.00%), Postives = 87/200 (43.50%), Query Frame = 0


Query: 8   QLHGHRPSALKISKHSHNIKKPXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFKDLVQRLT 67
           +L G RP+ LK+ K SH I KP           PVIIYT SPK+IHT+P++F  LVQRLT
Sbjct: 71  ELQGPRPAPLKVRKDSHKITKPLVAPAQHHHRPPVIIYTVSPKVIHTHPSEFMTLVQRLT 130

Query: 68  GCQLDT------PD----------IHQVQSKTISMSMSMPTSSTEQG------VESVGRF 127
           G           PD             V+   IS        S++ G      VE    F
Sbjct: 131 GSSSTNFLSSSFPDPKGAISPAARFASVEKTNISPDKKKQPQSSDMGMDMSTDVERSSVF 190

Query: 128 PTGILPPTSELLPPIMPTLPSTSMDLSSLTHY------------FQDSSIAP---NNFAS 162
           P GIL P   LLPPI P   S   D + ++ Y            + +SS  P   + F S
Sbjct: 191 P-GILSPGPALLPPIPPNFFSPLSDPNPMSFYHDLSPVLQGNRNYLESSFMPSPNSTFLS 250

[Close]

BLAST of Carg15779 vs. TrEMBL
Match: tr|A0A2I0W3R9|A0A2I0W3R9_9ASPA (Protein MKS1 OS=Dendrobium catenatum OX=906689 GN=MKS1 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 59/144 (40.97%), Postives = 70/144 (48.61%), Query Frame = 0


Query: 1   MAERKHLQLHGHRPSALKISKHSHNIKKPXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFK 60
           ++ R+ LQL G RPS L++SK SH I KP        Q  PVIIYT SPK+IH  P  F 
Sbjct: 5   LSHRRELQLQGPRPSPLRVSKDSHKITKPSPLPQQ--QREPVIIYTISPKVIHVEPANFM 64

Query: 61  DLVQRLTGCQLDTPDIHQVQSKTISMSMSMPTSSTEQGVESVGRFPTGILPPTSELLPPI 120
            LVQRLTG     PD           +   PT+S+      V   P GIL P    LPPI
Sbjct: 65  GLVQRLTG-----PD---------RAAADPPTTSSAAPERPVAIRP-GILLPVPTSLPPI 124

Query: 121 MPTLPSTSMDLSSLTHYFQDSSIA 145
            P   S+S    S   +  D S A
Sbjct: 125 PPAFFSSSSLDPSFHSFLHDMSPA 131

[Close]

BLAST of Carg15779 vs. TrEMBL
Match: tr|A0A2I0A820|A0A2I0A820_9ASPA (Protein MKS1 OS=Apostasia shenzhenica OX=1088818 GN=MKS1 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.8e-10
Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 4  RKHLQLHGHRPSALKISKHSHNIKKPXXXXXXXLQHRPVIIYTDSPKIIHTNPTQFKDLV 63
          R+ + L G RP++L++ K SH +KKP        +  PVIIYT SPK+IHT P++F  LV
Sbjct: 20 RRGINLQGPRPASLRVGKDSHKVKKPELPPQPSQRRTPVIIYTVSPKVIHTKPSEFMSLV 79

Query: 64 QRLTGC 70
          QRLTGC
Sbjct: 80 QRLTGC 85

The following BLAST results are available for this feature:

BLAST of Carg15779 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959576.1	3.3e-71	89.51	protein MKS1-like [Cucurbita moschata]	[more]
XP_023542758.1	1.2e-60	83.95	protein MKS1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023551504.1	1.3e-32	55.69	protein MKS1-like [Cucurbita pepo subsp. pepo] >XP_023551505.1 protein MKS1-like...	[more]
XP_022939148.1	3.0e-32	55.69	protein MKS1-like [Cucurbita moschata]	[more]
XP_022993351.1	9.6e-31	53.89	protein MKS1-like [Cucurbita maxima]	[more]

BLAST of Carg15779 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68450.1	9.6e-09	48.44	VQ motif-containing protein	[more]
AT3G18690.1	6.2e-08	48.00	MAP kinase substrate 1	[more]
AT3G18360.1	1.4e-07	40.70	VQ motif-containing protein	[more]
AT1G21326.1	1.7e-05	44.00	VQ motif-containing protein	[more]
AT1G21320.1	2.4e-04	48.00	nucleotide binding;nucleic acid binding	[more]

BLAST of Carg15779 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CA36\|VQ8_ARATH	1.7e-07	48.44	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q8LGD5\|MKS1_ARATH	1.1e-06	48.00	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
sp\|Q9LS54\|VQ20_ARATH	2.5e-06	40.70	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]

BLAST of Carg15779 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KI80\|A0A0A0KI80_CUCSA	6.8e-25	48.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G338080 PE=4 SV=1	[more]
tr\|A0A1S3B4N1\|A0A1S3B4N1_CUCME	2.0e-24	49.18	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103485735 PE=4 SV=1	[more]
tr\|A0A2R6RNX5\|A0A2R6RNX5_ACTCH	9.5e-11	35.00	Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0...	[more]
tr\|A0A2I0W3R9\|A0A2I0W3R9_9ASPA	1.2e-10	40.97	Protein MKS1 OS=Dendrobium catenatum OX=906689 GN=MKS1 PE=4 SV=1	[more]
tr\|A0A2I0A820\|A0A2I0A820_9ASPA	2.8e-10	51.52	Protein MKS1 OS=Apostasia shenzhenica OX=1088818 GN=MKS1 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15779-RA	Carg15779-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 48..69 e-value: 2.5E-10 score: 39.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..25
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 4..88

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15779	Cla013849	Watermelon (97103) v1	carwmB0064
Carg15779	Csa6G338080	Cucumber (Chinese Long) v2	carcuB0067
Carg15779	ClCG08G006550	Watermelon (Charleston Gray)	carwcgB0066
Carg15779	CSPI06G18010	Wild cucumber (PI 183967)	carcpiB0071
Carg15779	Cucsa.077000	Cucumber (Gy14) v1	carcgyB0070
Carg15779	CmaCh04G024300	Cucurbita maxima (Rimu)	carcmaB0088
Carg15779	CmaCh15G006170	Cucurbita maxima (Rimu)	carcmaB0087
Carg15779	CmoCh15G006210	Cucurbita moschata (Rifu)	carcmoB0092
Carg15779	CmoCh04G025470	Cucurbita moschata (Rifu)	carcmoB0094
Carg15779	Lsi08G005310	Bottle gourd (USVL1VR-Ls)	carlsiB059
Carg15779	Cp4.1LG01g21070	Cucurbita pepo (Zucchini)	carcpeB0096
Carg15779	Cp4.1LG13g04200	Cucurbita pepo (Zucchini)	carcpeB0095
Carg15779	CsGy6G017490	Cucumber (Gy14) v2	carcgybB0067
Carg15779	CsaV3_6G030890	Cucumber (Chinese Long) v3	carcucB0073
Carg15779	Cla97C08G149360	Watermelon (97103) v2	carwmbB0063
Carg15779	Bhi04G001408	Wax gourd	carwgoB0077

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15779	Carg01590	Silver-seed gourd	carcarB076

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15779	Cucumber (Gy14) v2	carcgybB0069
Carg15779	Cucumber (Gy14) v1	carcgyB0071
Carg15779	Cucurbita moschata (Rifu)	carcmoB0091
Carg15779	Cucurbita moschata (Rifu)	carcmoB0093
Carg15779	Cucurbita pepo (Zucchini)	carcpeB0097
Carg15779	Cucumber (Chinese Long) v2	carcuB0069
Carg15779	Cucumber (Chinese Long) v3	carcucB0075
Carg15779	Bottle gourd (USVL1VR-Ls)	carlsiB058
Carg15779	Melon (DHL92) v3.5.1	carmeB0066
Carg15779	Melon (DHL92) v3.6.1	carmedB0066
Carg15779	Watermelon (Charleston Gray)	carwcgB0065
Carg15779	Watermelon (97103) v2	carwmbB0066