Cucsat.G9609 (gene) Cucumber (B10) v3

Overview
NameCucsat.G9609
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionTranscription termination factor MTERF5
Locationctg1673: 3377334 .. 3386268 (-)
RNA-Seq ExpressionCucsat.G9609
SyntenyCucsat.G9609
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTATAGGGTGGGGAATGGGATGTTCGTGGAGCTCCAAAGCCCTAACCCTAACCCTAACCCTTCAATTTCTTCAATCCAATTCCCAAAATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCATAAACGTTTTCTCACCACCATTTCTACTTCTACATTGCCTTCCCCTCTATTTCTACCGTTCAATTCCTCAAAAATCCATCTGCCCTTTATTCAGGATCTCCTACTCCCAACGGTCCAAAGCTCCAATTCCATGAAATAGACATCCAGCAGTACGGAGCCATTATCGGTTTCTTGAAATCACATGGGTTCGAGAATCCACAGATCGCCAAGTTGGTTTCCAGGCAACCTTCGATCCTTCAATCCAGAGTCGCCACTCTGAAACCTAAATTTGAGATCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGCTAATTCTGTCAAACCCTTCGGTTCTTCACAGGAGCTTAGATTCTCAGTTGAAACCATCATTTCGTATCATAAAGGAAATGCTTGTATCGGATGAAAAGGTAACTGCTGCTATTTTTCGTTGTACGTGGCTTCTAACTTATACTTCCAAGGGTACTATGCGATCTAACATTGATGTTTTGGTTAGTGAGGGAGTACCTTCTAGGAATATCGTGAAATTGATTGAATTGAACCCTAGAACTATTTTGCGAAAGGTTGATTTAATGATTCATGCAGTGGAAACAGTTAAAGAATCAGGGGTTGAACCAAAGGATGGTATGTTTCTTCATGCAGTTAGAGCAGTGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAAATTTCCACCTTACTTCACATGTTCAGAGGAGAAAATGAGGGACGTTGCAGATTTCTGTTCCAACACTGCAATGTTAGATCCAGGAACTCTAATATCTTACCCTGTGTTATTCAAGTATTCAGTCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATCAAAAAGATTGCTTCGGCATTTGTGAAAGGGGAAGGATATTTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGCTGCAGCCGAAACCAAATCTGTTGTATAGGATTGGAAAGCTTGAAGTTTAGATTTGAGCATCATGATCTTCAAAGGGGGAGAGAATTTTTGTGGTTATTGAGCCTTCTGTTTCAGCTAACATTGCTTCTTGAGCCTTTTCAGGTGGGAGAGTTGTGTTGTCTTTCCATCCAAATTAAGACAGGTAAATCTATTTGGTGTACATTTCTTCATAGACGTGTTAATCTTGAAATTGGAGGCCTTTTTGTTTTTCCCTTTCCTAATCTTTTACTCTTTGCTTGAACATTTGTAAGTTTGTAGACTAATTTAGAATCAAATGATATTGAAATAGAGGTGATTTTGTTCATTCATACTATGAGATGAGATGAGAGACATTAGACTTTTTGAATATTCTGAGTTGGACTCTTATTCTTTTGCTATTCCAAATAGATTTTCATATCTTGGGTAAATGACAAACATTGTCATGAAATTCATTTTTATTTAAACGGTTTGAAAATTTCAAACCACTAAAGCTTAATTATAAGGATCATCATAGGCAATATTCGTTAAACTTTCCCACCTCCGTTCGAGTTCTTTTTTTATTATATTTTGTAAATAGTTTGATGGTTGTGAAAATGTTTCCCGGTTATTTTTTCTTTCTTTTTATTCTTTTTATTGTTTTTTTTTCTTTTGGTAAATTCAAGGACTCGAGTCTTCAACTTTAGTGTCTTTATGTAATATGTATAAATAAAACTAATTAAGGTTTAATATTTGTAGGTAGCTTAGTGGTAACTGTGCTTGTCACATGTCAATAAAATTTTGGGATCTGGATTCGCCACTCTATATATATTTGAATGGTTCGATTGAACTTATTCTTAACTTTAGATTAGGGTAGGGAGTTTCGTCTATTAGCGTAAGTTCAATTCACGTAATTGAATATAGTATTGCCATACCATAATATTACATGTAACAACAAGATAAGTTTGATCTTACTTATTTTCTTTGTAGGTGAATGAAGACTTCCTATACTAACTTAAATATCCTAATGCAATAGGATTGGTACCGCATCGTGTGAGAATCTGTTTCACAAGTCAAGAAGAGAATAATCAAGACAAGACTCGCTAGGAAGGTCAAGCCTACAAGAACCTGTGGCAAACCCTAACTTCGGTGACATTCAAGCGCCAACGATATTCACAAAAGCAATGTCACGTATCCATACCCTATGATATTTTTGCAAAAATAAAAGAGTTCAAAAAAATATTTAAATGGATAAATTAGCATTTTTTATACCATTTAAAAGGTTTGTTATTTATATTATGTTTAGTTAGAAACACTTTTGTTATACTCAATGGTGCAAAAACTTGGTTTTTGAAAATATTGGTAGAGAAAACAATATATAGGTATATATGAACATTTTTCTATTGACGAGTACATCTACATGGTGCAAAGAGTACCATAAAATCGATATTGGATTTGCTTTCAGACTACTCCCAATTTACAATTGAGTAGACGTCGATAGGATACTATTGTGTTGTGGATGTTTTGTGAATGACGTCGTGGGCTGCTTGTTTTGCGAGAAATCTGTCATTTGCCAATTTATTTTATTGAGATGGACGTGGAAATGAAGAACATGAAGTTTGAGAGGAAATATTGGGATTTGAGGATGGAGAACTAGGTGAATTTTTTTTAGAGTATGAACATTTAAGGCAATTTTTCGTATTAACAATTAAAATAAAATTTTATCATTTATTCAAAGTAAACCTTTAAATTTGTAATTTTATTAGTCGGTCTCTCTCAGTTAATATTTTCTACTTTACCCTACTTTTGCCATTTGTTTATATTCTTACGTTATATAAATTTAGATGTATTTGTCATTTTTCTAAACAATGATATTAATTTTAGAATTAAACGATGAAAGTTATTTGTAAGTAAAATAAATAATGCATTTCCTAATAGGGATAATTAAAAAATATCTAATATCCATAACCATTCCTCCATTATTTGAAAGTAATTATTGAAATAAAATTATGTATCTATATAAATAATAAAAATAATATACGAACTTCAAAATTCCATATCAAAATTCAACTTTTTAAGCTTTTAAATTTTATTTTCTTAAGTTTTACTCAAGGAAGGAAATTCGTCTTTTCTTCGCACGAAAAATATAAATTCATCTTTTAACAAAAGATAAAAGAAAAGTTCTAATATATTCCTTTATTTTTATTATTTAAGCCAAAATATAATATTCTTTTTATTTTTAATTAGGTAAATAAACAAAATTTTTCTTTTTCTTTTTACATATATATTAAAAATAAAATTTATATTTATTCGCTCAAAACAAAATTTATTAACTACTTAGATTAAATAATATTTTTTAATACAAAAATTATAAACAAAATTTCATTTTAATATTTAATTTATTTGACTTATCTTTCAAAAACTATAATAATAATTTAAAAAACATTTTAAAATAAAGGGTGCGATTTTAGGCGATGGGCCAAACAACCCCAATTGGGGATAGATGTTCGCTTCGTTGAGCTCAAAACCCTAACCAAAACCCTTTCTTCCTTTTCTTCATTCCAAACCCCAATATGTCCAAAATTTCCTCCACACTTCTTCTACATTTCATCCATAAACGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTCACCCTCTCTTTCTACCATCCAATTCCTCACTAATTCATGCGGCCTTTCTTCTGGATCTCCTACCTCCGCCGGTCGAAAGCTCCATTTCGATGAAAAACACATCCACCAGTACGGAGCCATCATCGGTTTCTTCAAATCTCATGGATTCGAGTATCCACAGATCTCCAATTTGATCTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTAATTTTATCAACCCCATGGGTGCTTAGCAAAAGCTTAGATTCCCAGTTGAAACCATCATTTTTTTTCATTAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTGTTATTTATCGTTTTCCAAGCCTTCTAATTAGTGATTGGCGGGGTAATTTTAAATCTAGCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAAAGAAGATGATTGCATTGAACCCTAGAACTTTTATGCAAAAGGCTGATAGAATGATTGATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTTCAGCATTTAAGAGATATCCATTTTATTTAACATGCTCAGAGGAGAAATTGAGGGATGTTGCAGATTTTTGTTTGAACGCTGCAAAGTTGGATCCAGTAACTCTAATTACTTACCCTGAGTTCTTCAAGTCTTCAATCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATAAAAAAGATTGGTCCGGTGCTTTTACGAGGGGAGAGAGAATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGTCGCAGCCGAAACCAAAAGTGTTGTATAGGATTGGAAAGTTGTAAGTTAACAATGTTCTTATAGTTTAAATTTGAGCATCATGATCTTCAAAAGGGGAGAGCATTTTTGTTGTTATTGAGCCTACTGTTCTGTTTCAAACAACACTACCTCTTGAGCTTTTCAAAATCTCTCTCTCTCTCTCTCTCTGTGTGTTTTCAGGTGGAGAGTTGTGTTGTTTTTGCATCCAAATCAAGGCAGTTAGGTACGTAAATCTATTTGATGTATATTTTGTTCATAGACATGTTAAACTTGAAATTGGAGGCCTTTCTGCTTCAACTTTTGTAAGTTTGTAGACTAATTTTTGAATCTAATGATCTTGAAATAGGGGTAGCTTTTTTTCATTCCTATTGTGAGATGACAGACATTAGAGTTATAGATAAACTTCACACACTTTCAACTATACCCTCCCGCTCTCAACATACTACAAAATCTCAAAACCTCATTCTTCCATTTATGTGTTCTCTCCCTGTAATTATCCTCTTCATCGTTCCAATCCCAACAATTAATATGTTTACAGCACTTCCGACCACCGTAATCCTTTTTCTGACCTCGAAATCTTATTCCTAACCCAAAAATACCAACCAAACTACCTAACTCTCCGGCCACATTCTGCCATATAATTTCTTAATTTCACCTCACAAATCTTAAAAAATCCAAGCCCTTCCATCTTTCAAATTGGCTGCCAAAATTTTAAATAAGCCAATCCAGGTTTCTTCACAGTGAGGGAAAAATTCCAACTTTCTTTTGATATAAACTCTCAAGATTTTCATTTGTTGCAGCAAGTTTCTAGAGAGGACCAAATAAAGAAAAGGTTTAAAATTAGATAAGTTTCCTTTTTCTAAAACAATTTTTAAGTTTAGTTTTGAAAATTGGAAATATGGAAACTTTTGAATTAAACCAATGGTTAAAACAATCATTTGCAAAATTAAAAGTTTAATTAACGATCAAAAGGGTGTAGATGGTCATCAAACAAGATCAACAACATTGATTACATGTAACAAGAAAGAACGATAGAAAAAACATAATTGAAAAATGGAGAGAAAACAAATATAAATAAATTAACTAAAAGGGAAAATTGAAATGATTATAACCAAATATGTAATTGATTCTTAGTTTAATTTTATAATCACCACTTTTCTTCATACATTTTAAATTTTACCTTAATTATATTATTTAACCTATATTACATATAGTTATTTGAAAAGGGAAAACAAACAAACAAATAAATCCTAATTAATAAAAACTAATTTCACTTTTCCTTTTTTATTAACAAAATTTGAGTAAAATGTGAGTTCTTATTTCATCCTTCCTTACCCTTTTCTTTTTTAAGGAAAAAAGTAAATTAAACATATATGTATATATATTCATTAATTTAAAAGTAGAATATGATTTAAACATTCTAAGATGATCAATAGTTAAAACCAGCCATTCTTGCACATGGTGACATTTCTTGTTAAAGGGAAAACCAAATTAGACAAAAACATTTTTAAAAAGATAACTTATGATATATATATATTTTTTGCATATCGGTAAAATTAGTGATATCATAGGACTATTAGACACCAATTAAATGACTATTGTTATTGACTCTTAAATTTTACTTTTAAAATTTAGAAAATGTAGTGACATGAATTTTATTATCATAATTTTTTTTTTTTTTTTTACTATTTTTGTAAAAATCCCAATATAATGTCAGAATCTAAAGAACAAGATACACAGGAAGAAAAGCATAGCAATAAGTGTAATTATTCCTTATAGTTTACACAGCGTAACGAGAGACTGTTTAGAGGTTCTAAAGCCAAGTTCTCATGTTGCATACTATAGTCGATAAAAGTCTCATTGGTAATCCTAAAATGGCTCAAGAAAGTTATCAAGGGAAGAGAATACAATTTCTTTTTCACACTTTAGATAAAAGTTTAATTTATTATTAAGGATAGTTGCAAATTTAGCAATTAGATTCAAAACAATTAACATTATAGCAACATTTTAAAAATTTTGCAAATATAGCAAAATTTGTCAAATTCTACTCATGATAAACTATGTTGCATTATTATTCCGGGTCAATTTCAATTTTGGTTATTATTAATAGATTTTTTTTTTTTTTTTTTTGTTTGGGTGTGGTTTAGGTGAAGGCTAGGTGACTAAGTGTGACGACGAGAAATGTGAAAGAATTGAGAGAACAACAGAATACACAAAAGGAAGAGTCGGGCGATGGGCCAAACAGACCCAGTGGCTTTTCTGCTCTCTGTGGGGATCTTCGCTTCGTTGAGCTCAAAACCCTAACCAAAACCCACCCTTCATTTTCTTCATTTTCTTCATTTTCTTCGTTCCAAATCACAATATGTCCAAATTTTCCTCCACATCTCTTCTACATTTCATCCATAAACGTTTTCTTAATACCATTTCTACTTCTACGTTGCCTTCACCCTCTTTTTCTACCATCCAGTTCCTCACTAATTCATGCGGCCTTTCTTCAGGATCTCCTACCTCCGGCGGTCGAAAGCTCCAATTCGATGAAAAACACATCCACCAGTACGAAGCCATTATCGGTTTCTTGAAATCTCATGGATTCCAGTATCCACAGATCGCCAAATTGATCTCGAGGCGACCTTCGATCCTTCAATCCAAAGTATCCAACAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTACTTCTATCAACCCCATGGGTTCTTGGCAGCAGCTTAGATTCTCAGTTGAAACCATCTTTTTTTGTCATAAAGGAAATGCTTGAATCGGATGAACAAGTAATTGCTGCTATTTCTCGTTTTCCAAGCCTACTAATTTATAATTTGAAGGGTAATTTTAAATCTATCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAGCGAAAATGATTGCATTGAACCCTAGAACTTCTATGCAAAAGGCTGATAGAATGATTCTTGCAGTGAAAACGGTTAAAGAATCAGGCATTGAACCAAAGGCTCCCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAACGAATCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTTCAGCATTTAAGAAATATCCATATTATTTAACTTGTTCAGAGGAGAAATTGAGGAATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATAGAGAAACTCTAATTACTTACCCTATGTTCTTCAACACTTCACTCGACAAGCGGCTCTATCCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGAACACAAAGATTGCTCGGGTTATTTTACTACGAGGGGAGAAAGAATTTATGGAGAAATACGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTTGCAGCCGAAACCAAATCTGTTCTATAGGATTGCAAAGATGTAAGTTAACAATGTTCTTATATTTTTGAATTTGAGCATCATGATCTTCAAAAGGGAGAGCACTTTTGTTGTTATTGAGCCTACTGTTCTGTTTCAAATAACACTGCTTCTTGAGCTTTTCAAGATCTCTCTCTGTGTTTTCAGGTGGGAGAGCTGTGTTGTTTTTGCATCCAAATTAAGGCTGTTAGTCAGGTAAATCTATTTGGTGTATATTTCTTTCTTTGGACATGTTAATCTTGAAATAGGAGGCCTTTTTGTTTTCCCCTTTTCTAATCTTTTACTCTTTCCTTGAACTTTTGTAAGTTTGTAGACTAATTTTGAATCTAATTGCGTTGAAATAGGGGTGGCTTTTTTTCATTCCTATTGTGGGATGACAAACATTAGACTTATAGATAAACTTCACACACTTCAAAAATTCAAGTCCTTCATCTTTCAACACAAATATACACCTTTTTGAGCCAATAGTTTTAAATAAGTCAATCCAGGCTTCTCCACATTGAGGGAAACATTCCAACATTTCTTTTCAATATAAACTCAAGATTTGGGGCTATTGTTCCCCAGAAGATTACCGAAG

Coding sequence (CDS)

ATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCATAAACGTTTTCTCACCACCATTTCTACTTCTACATTGCCTTCACCCTCTCTTTCTACCATCCAATTCCTCACTAATTCATGCGGCCTTTCTTCTGGATCTCCTACCTCCGCCGGTCGAAAGCTCCATTTCGATGAAAAACACATCCACCAGTACGGAGCCATCATCGGTTTCTTCAAATCTCATGGATTCGAGTATCCACAGATCTCCAATTTGATCTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTAATTTTATCAACCCCATGGGTGCTTAGCAAAAGCTTAGATTCCCAGTTGAAACCATCATTTTTTTTCATTAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTGTTATTTATCGTTTTCCAAGCCTTCTAATTAGTGATTGGCGGGGTAATTTTAAATCTAGCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAAAGAAGATGATTGCATTGAACCCTAGAACTTTTATGCAAAAGGCTGATAGAATGATTGATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTTCAGCATTTAAGAGATATCCATTTTATTTAACATGCTCAGAGGAGAAATTGAGGGATGTTGCAGATTTTTGTTTGAACGCTGCAAAGTTGGATCCAGTAACTCTAATTACTTACCCTGAGTTCTTCAAGTCTTCAATCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATAAAAAAGATTGGTCCGGTGCTTTTACGAGGGGAGAGAGAATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGTCGCAGCCGAAACCAAAAGTGTTGTATAG

Protein sequence

MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEKHIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYPEFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMDIYRGNVAAETKSVV
Homology
[Close]
BLAST of Cucsat.G9609 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 8.7e-10
Identity = 72/299 (24.08%), Postives = 125/299 (41.81%), Query Frame = 0 

Query: 76  GFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWVLSKSLDS 135
           G    QI  +  +  +     +   +KP  EFL ++G     +  ++   P +   SL  
Sbjct: 207 GLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTD 266

Query: 136 QLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGVPSRNIKKMI 195
            LKP+  F+ E L  D+   A +I RFP++L    R    S+ + L+  G+    I +++
Sbjct: 267 NLKPTMAFL-ETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRIL 326

Query: 196 ALNPRTFMQKA-DRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKKINVMKSLG 255
              P        D++   ++  + L ++    +        LS+ +S  K         G
Sbjct: 327 TRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSI-ESNLKPVTEFFLEKG 386

Query: 256 WSEKEIFSAFKRYPFYLTCS-EEKLRDVADFCLNAAKLDPVTLITYPEFFKSSIEKRLQP 315
           +   EI     RY    T S +E +    D+           L+ +P+FF  S+++R++P
Sbjct: 387 FGLDEIGIMISRYGALYTFSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSLQERIKP 446

Query: 316 RYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMDIYRGNVAAETKS 373
           RY++++   V+ LL       VL     EF EK V K       +M +   NV AE  S
Sbjct: 447 RYELVQRSGVRLLL-----NQVLSLSGIEF-EKVVKK------KMMKLVSNNVIAEQSS 489

[Close]
BLAST of Cucsat.G9609 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.3e-08
Identity = 51/252 (20.24%), Postives = 107/252 (42.46%), Query Frame = 0 

Query: 69  IGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWV 128
           I +    G    Q+ ++I+R P +L  RV   +KP  E L+ IG     + ++I   P+V
Sbjct: 220 IAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYV 279

Query: 129 LSKSLDSQLKPSFFFIKEILESD--EQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGV 188
           L   L+ ++KP+   I+ +LE    ++  A ++ ++P +L  + R    +   +  S   
Sbjct: 280 LGFGLEDKVKPN---IEALLEFGVRKEALAFIVAQYPDILGIELRDKLATQQSLFESS-- 339

Query: 189 PSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKK 248
                   I ++   F +  +RM  A+                       S+  +   K 
Sbjct: 340 --------ILVSSEDFGRVIERMPQAI-----------------------SLGRTAVLKH 399

Query: 249 INVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYPEFFKSS 308
           +N + S G+   ++       P  L  + + ++   ++  N  + D   L+ +P FF   
Sbjct: 400 VNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTYG 435

Query: 309 IEKRLQPRYKVL 319
           +E  ++PR++++
Sbjct: 460 LESTVRPRHEMV 435

[Close]
BLAST of Cucsat.G9609 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-07
Identity = 50/238 (21.01%), Postives = 102/238 (42.86%), Query Frame = 0 

Query: 81  QISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWVLSKSLDSQLKPS 140
           Q+ ++I+R P +L  RV   +KP  E L+ IG     + ++I   P+VL   L  ++KP+
Sbjct: 223 QVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPN 282

Query: 141 FFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGVPSRNIKKMIALNPR 200
              + +I    E + A+++ ++P +L  + R    +   +  S  + SR           
Sbjct: 283 IEALVDIGVRKEAL-ASIVMQYPDVLGLELRDKLVAQQSLFESSILVSR----------E 342

Query: 201 TFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKKINVMKSLGWSEKEI 260
            F +  +RM  A+                       S+  +   K +N + + G+   ++
Sbjct: 343 DFGRVLERMPQAI-----------------------SLGRAAVLKHVNFLTACGFMLSQV 402

Query: 261 FSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYPEFFKSSIEKRLQPRYKVL 319
                  P  L  + + +R   ++  N  + D   L+ +P FF   IE  ++PR++++
Sbjct: 403 SKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTYGIESTVRPRHEMV 426

[Close]
BLAST of Cucsat.G9609 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.1e-07
Identity = 38/166 (22.89%), Postives = 74/166 (44.58%), Query Frame = 0 

Query: 68  IIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGF-VGPLLHKLILSTP 127
           ++ FF++ G    Q+  +I   P ++   + T L     FL  +G     ++ K+++  P
Sbjct: 117 LLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNP 176

Query: 128 WVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGV 187
           +++  S+D +L+P+  F+K  +   E    +V+  FP LL  D     K + D L   G 
Sbjct: 177 FLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGF 236

Query: 188 PSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYAL 233
               I  M+   P+            +K+VK   ++P+ R  +  +
Sbjct: 237 GDSQIATMVTGYPQIL----------IKSVKN-SLQPRIRFLVQVM 271

[Close]
BLAST of Cucsat.G9609 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.3e-07
Identity = 46/263 (17.49%), Postives = 112/263 (42.59%), Query Frame = 0 

Query: 59  EKHIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIG-----F 118
           +K +     +I F +  G        +I+RRP IL S + + L P+ +F++ +       
Sbjct: 213 QKSVEDIERLISFLEPFGG-----IGIIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFA 272

Query: 119 VGPLLHKLILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGN 178
            G +L +L    P +LS S++  +     F+K       +    +++ FP+++ +     
Sbjct: 273 TGTVLRRL----PAILSYSVE-HMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERK 332

Query: 179 FKSSSDILASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALF 238
            +   + L   G  S  + K ++  P       + +   +  + ++G + + +   +A+ 
Sbjct: 333 LRPRIEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAMG 392

Query: 239 VRLSMNDSTWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDP 298
                +    ++ I +  S G S ++I +   ++P  L  +   L +  ++ +     + 
Sbjct: 393 AVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREV 452

Query: 299 VTLITYPEFFKSSIEKRLQPRYK 317
             L+ +P F    ++ R++ RY+
Sbjct: 453 EELLAFPAFLGYKLDSRIKHRYE 465

[Close]
BLAST of Cucsat.G9609 vs. NCBI nr
Match: XP_011655534.2 (transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus] >KAE8648645.1 hypothetical protein Csa_007996 [Cucumis sativus])

HSP 1 Score: 725 bits (1871), Expect = 2.82e-263
Identity = 372/374 (99.47%), Postives = 372/374 (99.47%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISST LLHFIHKRFL TISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK
Sbjct: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK
Sbjct: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI
Sbjct: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND
Sbjct: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP
Sbjct: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD
Sbjct: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IYRGNVAAETKSVV
Sbjct: 361 IYRGNVAAETKSVV 374

[Close]
BLAST of Cucsat.G9609 vs. NCBI nr
Match: XP_031741662.1 (transcription termination factor MTERF9, chloroplastic [Cucumis sativus] >KAE8648646.1 hypothetical protein Csa_008275 [Cucumis sativus])

HSP 1 Score: 610 bits (1572), Expect = 1.01e-217
Identity = 320/375 (85.33%), Postives = 338/375 (90.13%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSK SST LLHFIHKRFL TISTSTLPSPS STIQFLTNSCGLSSGSPTS GRKL FDEK
Sbjct: 1   MSKFSSTSLLHFIHKRFLNTISTSTLPSPSFSTIQFLTNSCGLSSGSPTSGGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HIHQY AIIGF KSHGF+YPQI+ LISRRPSILQS+VS NLKPKFEFLQEIGFVGPLLHK
Sbjct: 61  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           L+LSTPWVL  SLDSQLKPSFF IKE+LESDEQV AA I RFPSLLI + +GNFKS SDI
Sbjct: 121 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAA-ISRFPSLLIYNLKGNFKSISDI 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMIALNPRT MQKADRMI AVKTVKE GIEPKA MFIYALFVRLSMN+
Sbjct: 181 LASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNE 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINV+KSLGWSE EIFSAFK+YP+YLTCSEEKLR+VADFC N AKLD  TLITYP
Sbjct: 241 STWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPV-LLRGEREFVEKYVVKHLDEIPNLM 360
            FF +S++KRL PRYKVLEVLKVKNLLK  KI  V LLRGE+EF+EKYVVKHLDEIPNLM
Sbjct: 301 MFFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNVAAETKSVV 374
           DIYRGNVAAETKSV+
Sbjct: 361 DIYRGNVAAETKSVL 374

[Close]
BLAST of Cucsat.G9609 vs. NCBI nr
Match: KAA0034116.1 (transcription termination factor MTERF2 [Cucumis melo var. makuwa])

HSP 1 Score: 565 bits (1456), Expect = 4.45e-200
Identity = 292/374 (78.07%), Postives = 325/374 (86.90%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+FLLHFI  RFL T+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           + FK S +KRL+PRYKVLEVLKVKNLLK KKI  VL+ GER FVEKYVVKHLDEIPNLMD
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IY GNV AETKSV+
Sbjct: 361 IYVGNVEAETKSVL 373

[Close]
BLAST of Cucsat.G9609 vs. NCBI nr
Match: XP_008445933.1 (PREDICTED: transcription termination factor MTERF2, chloroplastic-like [Cucumis melo] >TYK15804.1 transcription termination factor MTERF2 [Cucumis melo var. makuwa])

HSP 1 Score: 564 bits (1454), Expect = 8.98e-200
Identity = 291/374 (77.81%), Postives = 325/374 (86.90%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSK+SS+FLLHFI  RFL T+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           + FK S +KRL+PRYKVLEVLKVKNLLK KKI  VL+ GER FVEKYVVKHLDEIPNLMD
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IY GNV AETKSV+
Sbjct: 361 IYVGNVEAETKSVL 373

[Close]
BLAST of Cucsat.G9609 vs. NCBI nr
Match: XP_008445932.1 (PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15810.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 563 bits (1451), Expect = 2.66e-199
Identity = 286/375 (76.27%), Postives = 327/375 (87.20%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+FLLHF H RFL T+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGA+I F KSHGFE  QI+NL+S+RPSILQS+VSTNLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVL  SLDSQLKPSFFF+K+ILESDEQVTAA+  RFPSLL+SD +GN KS+ D+
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAIC-RFPSLLVSDLKGNLKSNIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMI ++PRT MQK DRMI  VK VKELGIEPK R F++A+ +R S++D
Sbjct: 181 LASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSE EI +AFK+ P YL+CSEEKLRDV DFCLN AKLDP T+I+YP
Sbjct: 241 STWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIK-KIGPVLLRGEREFVEKYVVKHLDEIPNLM 360
             F S+++KRL+PR+K+LE LKVK+LLK   KI   L+RGEREFVE+YVVKHLD+IPNLM
Sbjct: 301 TLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLM 360

Query: 361 DIYRGNVAAETKSVV 374
           DIYRGNVA ETKSV+
Sbjct: 361 DIYRGNVATETKSVL 374

[Close]
BLAST of Cucsat.G9609 vs. ExPASy TrEMBL
Match: A0A5A7SW09 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001070 PE=3 SV=1)

HSP 1 Score: 565 bits (1456), Expect = 2.16e-200
Identity = 292/374 (78.07%), Postives = 325/374 (86.90%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+FLLHFI  RFL T+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           + FK S +KRL+PRYKVLEVLKVKNLLK KKI  VL+ GER FVEKYVVKHLDEIPNLMD
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IY GNV AETKSV+
Sbjct: 361 IYVGNVEAETKSVL 373

[Close]
BLAST of Cucsat.G9609 vs. ExPASy TrEMBL
Match: A0A5D3CXX8 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003080 PE=3 SV=1)

HSP 1 Score: 564 bits (1454), Expect = 4.35e-200
Identity = 291/374 (77.81%), Postives = 325/374 (86.90%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSK+SS+FLLHFI  RFL T+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           + FK S +KRL+PRYKVLEVLKVKNLLK KKI  VL+ GER FVEKYVVKHLDEIPNLMD
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IY GNV AETKSV+
Sbjct: 361 IYVGNVEAETKSVL 373

[Close]
BLAST of Cucsat.G9609 vs. ExPASy TrEMBL
Match: A0A1S3BDE1 (transcription termination factor MTERF2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488812 PE=3 SV=1)

HSP 1 Score: 564 bits (1454), Expect = 4.35e-200
Identity = 291/374 (77.81%), Postives = 325/374 (86.90%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSK+SS+FLLHFI  RFL T+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           + FK S +KRL+PRYKVLEVLKVKNLLK KKI  VL+ GER FVEKYVVKHLDEIPNLMD
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IY GNV AETKSV+
Sbjct: 361 IYVGNVEAETKSVL 373

[Close]
BLAST of Cucsat.G9609 vs. ExPASy TrEMBL
Match: A0A5D3CWR8 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003140 PE=3 SV=1)

HSP 1 Score: 563 bits (1451), Expect = 1.29e-199
Identity = 286/375 (76.27%), Postives = 327/375 (87.20%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+FLLHF H RFL T+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGA+I F KSHGFE  QI+NL+S+RPSILQS+VSTNLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVL  SLDSQLKPSFFF+K+ILESDEQVTAA+  RFPSLL+SD +GN KS+ D+
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAIC-RFPSLLVSDLKGNLKSNIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMI ++PRT MQK DRMI  VK VKELGIEPK R F++A+ +R S++D
Sbjct: 181 LASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSE EI +AFK+ P YL+CSEEKLRDV DFCLN AKLDP T+I+YP
Sbjct: 241 STWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIK-KIGPVLLRGEREFVEKYVVKHLDEIPNLM 360
             F S+++KRL+PR+K+LE LKVK+LLK   KI   L+RGEREFVE+YVVKHLD+IPNLM
Sbjct: 301 TLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLM 360

Query: 361 DIYRGNVAAETKSVV 374
           DIYRGNVA ETKSV+
Sbjct: 361 DIYRGNVATETKSVL 374

[Close]
BLAST of Cucsat.G9609 vs. ExPASy TrEMBL
Match: A0A1S3BEP9 (uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=3 SV=1)

HSP 1 Score: 563 bits (1451), Expect = 1.29e-199
Identity = 286/375 (76.27%), Postives = 327/375 (87.20%), Query Frame = 0 

Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+FLLHF H RFL T+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGA+I F KSHGFE  QI+NL+S+RPSILQS+VSTNLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVL  SLDSQLKPSFFF+K+ILESDEQVTAA+  RFPSLL+SD +GN KS+ D+
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAIC-RFPSLLVSDLKGNLKSNIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMI ++PRT MQK DRMI  VK VKELGIEPK R F++A+ +R S++D
Sbjct: 181 LASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSE EI +AFK+ P YL+CSEEKLRDV DFCLN AKLDP T+I+YP
Sbjct: 241 STWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIK-KIGPVLLRGEREFVEKYVVKHLDEIPNLM 360
             F S+++KRL+PR+K+LE LKVK+LLK   KI   L+RGEREFVE+YVVKHLD+IPNLM
Sbjct: 301 TLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLM 360

Query: 361 DIYRGNVAAETKSVV 374
           DIYRGNVA ETKSV+
Sbjct: 361 DIYRGNVATETKSVL 374

The following BLAST results are available for this feature:
BLAST of Cucsat.G9609 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4JVI38.7e-1024.08Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
Q6AUK66.3e-0820.24Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja... [more]
B6TGN41.4e-0721.01Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT... [more]
Q9SZL63.1e-0722.89Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
Q9FK235.3e-0717.49Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of Cucsat.G9609 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011655534.22.82e-26399.47transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus] >KA... [more]
XP_031741662.11.01e-21785.33transcription termination factor MTERF9, chloroplastic [Cucumis sativus] >KAE864... [more]
KAA0034116.14.45e-20078.07transcription termination factor MTERF2 [Cucumis melo var. makuwa][more]
XP_008445933.18.98e-20077.81PREDICTED: transcription termination factor MTERF2, chloroplastic-like [Cucumis ... [more]
XP_008445932.12.66e-19976.27PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 tra... [more]
BLAST of Cucsat.G9609 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SW092.16e-20078.07Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3CXX84.35e-20077.81Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S3BDE14.35e-20077.81transcription termination factor MTERF2, chloroplastic-like OS=Cucumis melo OX=3... [more]
A0A5D3CWR81.29e-19976.27Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S3BEP91.29e-19976.27uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 107..138
e-value: 3.3
score: 16.7
coord: 71..102
e-value: 1.5E-5
score: 34.5
coord: 33..66
e-value: 1600.0
score: 2.3
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 58..145
e-value: 2.9E-12
score: 46.2
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 10..146
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 35..147
e-value: 1.0E-20
score: 76.0
NoneNo IPR availablePANTHERPTHR13068:SF31TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKEcoord: 10..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G9609.T11Cucsat.G9609.T11mRNA
Cucsat.G9609.T10Cucsat.G9609.T10mRNA
Cucsat.G9609.T13Cucsat.G9609.T13mRNA
Cucsat.G9609.T12Cucsat.G9609.T12mRNA
Cucsat.G9609.T15Cucsat.G9609.T15mRNA
Cucsat.G9609.T17Cucsat.G9609.T17mRNA
Cucsat.G9609.T9Cucsat.G9609.T9mRNA
Cucsat.G9609.T8Cucsat.G9609.T8mRNA
Cucsat.G9609.T1Cucsat.G9609.T1mRNA
Cucsat.G9609.T3Cucsat.G9609.T3mRNA
Cucsat.G9609.T2Cucsat.G9609.T2mRNA
Cucsat.G9609.T5Cucsat.G9609.T5mRNA
Cucsat.G9609.T4Cucsat.G9609.T4mRNA
Cucsat.G9609.T7Cucsat.G9609.T7mRNA
Cucsat.G9609.T6Cucsat.G9609.T6mRNA
Cucsat.G9609.T19Cucsat.G9609.T19mRNA
Cucsat.G9609.T18Cucsat.G9609.T18mRNA
Cucsat.G9609.T20Cucsat.G9609.T20mRNA
Cucsat.G9609.T21Cucsat.G9609.T21mRNA
Cucsat.G9609.T32Cucsat.G9609.T32mRNA
Cucsat.G9609.T31Cucsat.G9609.T31mRNA
Cucsat.G9609.T29Cucsat.G9609.T29mRNA
Cucsat.G9609.T37Cucsat.G9609.T37mRNA
Cucsat.G9609.T35Cucsat.G9609.T35mRNA
Cucsat.G9609.T34Cucsat.G9609.T34mRNA
Cucsat.G9609.T14Cucsat.G9609.T14mRNA
Cucsat.G9609.T16Cucsat.G9609.T16mRNA
Cucsat.G9609.T30Cucsat.G9609.T30mRNA
Cucsat.G9609.T26Cucsat.G9609.T26mRNA
Cucsat.G9609.T36Cucsat.G9609.T36mRNA
Cucsat.G9609.T24Cucsat.G9609.T24mRNA
Cucsat.G9609.T25Cucsat.G9609.T25mRNA
Cucsat.G9609.T41Cucsat.G9609.T41mRNA
Cucsat.G9609.T40Cucsat.G9609.T40mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003690 double-stranded DNA binding