Cucsat.G9609.T17 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G9609.T17
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Transcription termination factor MTERF5
Location	ctg1673: 3377334 .. 3390266 (-)
RNA-Seq Expression	Cucsat.G9609.T17
Synteny	Cucsat.G9609.T17

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCGGTTTCGTCTCGGCGGGGTGCGGTGGGGATGTTCGCGGAGCTCAAAACCCTAACCAAAACCCTTCCTTCATTTTCTTCATTCTAACCCCCAATATGTTCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCACAAGCGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTTACGCTCTGTTTCTACCATCCAATTTCTCACTAATTCATGTGGCCTTTCTTCAGGATCTCCTTCTTCCAACGGTCGAATGCTCCAATTCGATGATAAAAGCATCCAGCAGTACGAATCCGTTATCGGTTTCTTGAAATCGCATGGATTCGATAATCTACAGATCGCCAATTTGGTCTCGAGGCGACCTAACATCCTTGGATCCAGAGTATCCACCAATCTCAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGATAATTTTAGCAAACCCACCGCTCCTTCTCAGGAGCTTACATTCTCATTTGAAACCATCACTTGTTTTCTTGAAGGAAATTCTTGAATCGGATGAACGAGTAATTGCTGCTATTTGTAGTTCTTCGTGGCTTCTGACTTATGATTTTGAGCGTGTTATAAAACCTAATGTTGATGTTTTGGCCAGTGAAGGAGTACCTTCAAGGAATATAGCAAAGTTGATTGCATTGGACCCTAGAACTATTATGCAAAAGGTTGATAGAATGATTCATGCAGTGAAAACGGCGAAAGAATTAGGCATCGAACCAAAGTCTGGCATGTTTATTTATGCAGTTGTTGTAAGGCTTTCAATGAGTGATTCAAATTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGGATGAGATTTTTACAGCATATAAGAAATATCCACCTTATTTAAATTGTTCAGAGGAGAAATTGAGGGATGTTGCAGATTTCTGTTCCAACACTGCCAAGTTAGATCCAGGAACTCTAATTACTTACCCTAACTTCTTCACTTTTTCAGTCGAGAAGCGGCTCCAACCGAGGTACAGAGTTCTTGAGGTTTTGAAGTTGAAAAATCTTCTTAAAAACAAAAAGATTGCTCCGTTTTTTGTCGAAGGGGAGAGAAGATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTTGCAGCCGAAACCAAATCTGTTCTATAGGATTGGAAAGTTGTAAGTTATCTATATATGTTCTTATAGTTTAAATTCTGCTGTATAATTCTTCATAGACATGTTAATCTTGAAATTGGTGGCCTTTTTGTTTCTCCCTTCCTAATCTTCTACTTGTGTAAGTTTGTAGAATAATTTTGAATCCCATGATGTTGAAATAAAGGTGGTTTTGTTCATTCATACTGTGAGATGAGAGAATACTCTTCAGAACTACTTAAAATATTTTGTTTTTTCAGATTGTTTATTAGTCCCTTTTCTAGTCACATCCTTGAAGCTCTGGGTGAATCACTACATCTTGCACTCAGCCATGATCTTCTTCTAAAAAAAATCCTTTCAATGCTTGTTTTCACTTGAAGATTGAAGATGGAACAGAAACAGGCAAACCCTAATGCGTAAAGACAAATGGAAAATGAGGAAGGAGGAAAGAAAATCACTTCAATGGTCTACAAAGGAGATGGAACCACTCCCACTTTGAAGGATAAGGGTGTAAGTATAATGATGTTTGAACATTTATGAAACTGATTTTGGGTTTTTGTAAATTCTTATTTTTCTTTCTTTTTGTAATTTTTTAAAAATAATTTTGCTATTTTTGCAACTTAAAAATTGTTATTCTAATTTTTAACTTCATCGTGCATTTACATTTGGAGTAATAATCTCATGTTCAACTTCATCGTGTTTTTTTAAGAAGAAGAATAAAAACAAATTATAGTCCCGTTTGAAGCATGCAAATACTCATCTTCATTTTCCAACTTACATCTTTGATCTTCAAGTTTACAACTCGTAATTTCAAGCACTTGGGGTTGAAGAACGAAAATCTTCACGGGAAAGAACAAAAATACAAAAGTTGCATCTTCTTTGTCTCTTGGAGAGATTTTTGGCGGATTTGTTCTCAAAATCATTTATAATATTTATTTAATAAAATGTAGACTTGGTTTTGGGACATTTTATGTAAAGAACACAATATCTTAGCCTATTTTGTTTGGAAAAAAAGAGAGGAGTAATTTCTTTTTAAACCATTTTTTTTTTATGATTAAAAGGGATGAGAAAGAAGAAGACCATGATGAATGCAAGATGCATTGATCGATTAAGAGTTACAGGGGTGACTGGAAAAGGGACTAAAAAATTGAAAACAATTGAAACTTTTAAGGATATACAAAAGAGATATTTCAAAATAGTAATTATTTCAAATATATGATCAAGAGATTAAGGATATACAAAAGAGAATGAGTAAAAACAAACCATTGAAGAGATTGACTATGAGTTAAACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAAGAAAGGCATGAGAGAAAAGCATATTGGCTAGTGATTGTGAGGCCCCAATTCTTGACTGGAGGGGACACCAAAGGCCTCTGCTCTTAAAAATTAAATTAAGATCTAATAAGAAAACTAATTTTGATTTTCAAATTATTAAAGGTGGGCAATTCATGTTATTTGAAAATAGAAATAAGGGTTGAGATTCAACCAATAAAAAGTAATAATATGATTGTTTTTAAAATTAAAAAAAAAAACGATGTTAAAATCTTCAACCAAAATTATTAAATTCTGAAATTGTTGTTGCACTTTGCTCTGTATCTCACTTAAGGTATCGTTTTTCGCCTAGTCAAGTCGGGTACTGATTATCTCGCCAAGTGGACAAAACGTCTAGTGGTCAAAAAACAAAGCTGAAAAACAAAGAATAGTTAAGTAATGGCTGAGTCGCAGATCACGTTTTCTTTAAGACGTTTGCTTCTTTGTCCAAACAAAATTATTGCCCCATCGTTCACAGGATAAAACAACATTTATTCTTCAATTGATTTTGCACATAAATCAATTGAAATCTCAGCACTCAGATAAACACTTACAATTGCTCAGTAAACTCAAAAGAAGAATTTTTAGAGAGAGTTTTCTTGCTTATGAAAATTGCGCGCGTATAATGAAAGAATGAAGAAAGTGTATATATAGTGTGAGAGAATCAATAGACCGTTGAAAATTAATTTTGTAACATTTTTATTTATGGAGAGATCATGTATGTTTACTTATTAAATACAGTAATAAACGTTTGATTCTTTTAAATATGTAATAAAAATCATAACATTAATAGATCTTATCATGTTTGACAATCTCTCCTACGATGTCAACATATGCGATGAGATGTTCTAATATTTCTTGTAGCTATCTCACATAACTCATGCTATCGCATAGTCATTATAAATATTACATAGTTGAAAACTAAAACACGAAAAACTCTCAAATTTTCATTTGCATAGCATTTGAAACATATAGTTATCGCATAACTTAGTCTTCTCAAATCGCATAAAGAATTAACGTTTAAAACATAGCTATATCGCGTAGCTTGGTCTTCTCGTATAAAGAATTTTTCTTCGACACAAATAAACAATGTTAGATTTCTAATGATCGAGAGTGGATTAGAAATGCCCAATTGTGATTACTTTGCCATATTTTTGTCATTTGTTTTATTCTCACACTATTTTTTTGAATAAATTTACTATCGACCATGTTTTCGTCGTTGTGATATTACTTTTAGAATTAACTCGAGAATATGGAAGTTATGTGTAAGTAAAATGAATAATGTATTTTTTCTACTTCATTAGATTTTTTTAATTCTCCATAACAATTTCTTTATTATTTGAAAGTAAAATTAAAAATGATTATTTAACTAAATAACAAATAATAAATAATAAACAAACTTCAAAAGATTCATTCATCTCTATAGGGTGGGGAATGGGATGTTCGTGGAGCTCCAAAGCCCTAACCCTAACCCTAACCCTTCAATTTCTTCAATCCAATTCCCAAAATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCATAAACGTTTTCTCACCACCATTTCTACTTCTACATTGCCTTCCCCTCTATTTCTACCGTTCAATTCCTCAAAAATCCATCTGCCCTTTATTCAGGATCTCCTACTCCCAACGGTCCAAAGCTCCAATTCCATGAAATAGACATCCAGCAGTACGGAGCCATTATCGGTTTCTTGAAATCACATGGGTTCGAGAATCCACAGATCGCCAAGTTGGTTTCCAGGCAACCTTCGATCCTTCAATCCAGAGTCGCCACTCTGAAACCTAAATTTGAGATCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGCTAATTCTGTCAAACCCTTCGGTTCTTCACAGGAGCTTAGATTCTCAGTTGAAACCATCATTTCGTATCATAAAGGAAATGCTTGTATCGGATGAAAAGGTAACTGCTGCTATTTTTCGTTGTACGTGGCTTCTAACTTATACTTCCAAGGGTACTATGCGATCTAACATTGATGTTTTGGTTAGTGAGGGAGTACCTTCTAGGAATATCGTGAAATTGATTGAATTGAACCCTAGAACTATTTTGCGAAAGGTTGATTTAATGATTCATGCAGTGGAAACAGTTAAAGAATCAGGGGTTGAACCAAAGGATGGTATGTTTCTTCATGCAGTTAGAGCAGTGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAAATTTCCACCTTACTTCACATGTTCAGAGGAGAAAATGAGGGACGTTGCAGATTTCTGTTCCAACACTGCAATGTTAGATCCAGGAACTCTAATATCTTACCCTGTGTTATTCAAGTATTCAGTCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATCAAAAAGATTGCTTCGGCATTTGTGAAAGGGGAAGGATATTTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGCTGCAGCCGAAACCAAATCTGTTGTATAGGATTGGAAAGCTTGAAGTTTAGATTTGAGCATCATGATCTTCAAAGGGGGAGAGAATTTTTGTGGTTATTGAGCCTTCTGTTTCAGCTAACATTGCTTCTTGAGCCTTTTCAGGTGGGAGAGTTGTGTTGTCTTTCCATCCAAATTAAGACAGGTAAATCTATTTGGTGTACATTTCTTCATAGACGTGTTAATCTTGAAATTGGAGGCCTTTTTGTTTTTCCCTTTCCTAATCTTTTACTCTTTGCTTGAACATTTGTAAGTTTGTAGACTAATTTAGAATCAAATGATATTGAAATAGAGGTGATTTTGTTCATTCATACTATGAGATGAGATGAGAGACATTAGACTTTTTGAATATTCTGAGTTGGACTCTTATTCTTTTGCTATTCCAAATAGATTTTCATATCTTGGGTAAATGACAAACATTGTCATGAAATTCATTTTTATTTAAACGGTTTGAAAATTTCAAACCACTAAAGCTTAATTATAAGGATCATCATAGGCAATATTCGTTAAACTTTCCCACCTCCGTTCGAGTTCTTTTTTTATTATATTTTGTAAATAGTTTGATGGTTGTGAAAATGTTTCCCGGTTATTTTTTCTTTCTTTTTATTCTTTTTATTGTTTTTTTTTCTTTTGGTAAATTCAAGGACTCGAGTCTTCAACTTTAGTGTCTTTATGTAATATGTATAAATAAAACTAATTAAGGTTTAATATTTGTAGGTAGCTTAGTGGTAACTGTGCTTGTCACATGTCAATAAAATTTTGGGATCTGGATTCGCCACTCTATATATATTTGAATGGTTCGATTGAACTTATTCTTAACTTTAGATTAGGGTAGGGAGTTTCGTCTATTAGCGTAAGTTCAATTCACGTAATTGAATATAGTATTGCCATACCATAATATTACATGTAACAACAAGATAAGTTTGATCTTACTTATTTTCTTTGTAGGTGAATGAAGACTTCCTATACTAACTTAAATATCCTAATGCAATAGGATTGGTACCGCATCGTGTGAGAATCTGTTTCACAAGTCAAGAAGAGAATAATCAAGACAAGACTCGCTAGGAAGGTCAAGCCTACAAGAACCTGTGGCAAACCCTAACTTCGGTGACATTCAAGCGCCAACGATATTCACAAAAGCAATGTCACGTATCCATACCCTATGATATTTTTGCAAAAATAAAAGAGTTCAAAAAAATATTTAAATGGATAAATTAGCATTTTTTATACCATTTAAAAGGTTTGTTATTTATATTATGTTTAGTTAGAAACACTTTTGTTATACTCAATGGTGCAAAAACTTGGTTTTTGAAAATATTGGTAGAGAAAACAATATATAGGTATATATGAACATTTTTCTATTGACGAGTACATCTACATGGTGCAAAGAGTACCATAAAATCGATATTGGATTTGCTTTCAGACTACTCCCAATTTACAATTGAGTAGACGTCGATAGGATACTATTGTGTTGTGGATGTTTTGTGAATGACGTCGTGGGCTGCTTGTTTTGCGAGAAATCTGTCATTTGCCAATTTATTTTATTGAGATGGACGTGGAAATGAAGAACATGAAGTTTGAGAGGAAATATTGGGATTTGAGGATGGAGAACTAGGTGAATTTTTTTTAGAGTATGAACATTTAAGGCAATTTTTCGTATTAACAATTAAAATAAAATTTTATCATTTATTCAAAGTAAACCTTTAAATTTGTAATTTTATTAGTCGGTCTCTCTCAGTTAATATTTTCTACTTTACCCTACTTTTGCCATTTGTTTATATTCTTACGTTATATAAATTTAGATGTATTTGTCATTTTTCTAAACAATGATATTAATTTTAGAATTAAACGATGAAAGTTATTTGTAAGTAAAATAAATAATGCATTTCCTAATAGGGATAATTAAAAAATATCTAATATCCATAACCATTCCTCCATTATTTGAAAGTAATTATTGAAATAAAATTATGTATCTATATAAATAATAAAAATAATATACGAACTTCAAAATTCCATATCAAAATTCAACTTTTTAAGCTTTTAAATTTTATTTTCTTAAGTTTTACTCAAGGAAGGAAATTCGTCTTTTCTTCGCACGAAAAATATAAATTCATCTTTTAACAAAAGATAAAAGAAAAGTTCTAATATATTCCTTTATTTTTATTATTTAAGCCAAAATATAATATTCTTTTTATTTTTAATTAGGTAAATAAACAAAATTTTTCTTTTTCTTTTTACATATATATTAAAAATAAAATTTATATTTATTCGCTCAAAACAAAATTTATTAACTACTTAGATTAAATAATATTTTTTAATACAAAAATTATAAACAAAATTTCATTTTAATATTTAATTTATTTGACTTATCTTTCAAAAACTATAATAATAATTTAAAAAACATTTTAAAATAAAGGGTGCGATTTTAGGCGATGGGCCAAACAACCCCAATTGGGGATAGATGTTCGCTTCGTTGAGCTCAAAACCCTAACCAAAACCCTTTCTTCCTTTTCTTCATTCCAAACCCCAATATGTCCAAAATTTCCTCCACACTTCTTCTACATTTCATCCATAAACGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTCACCCTCTCTTTCTACCATCCAATTCCTCACTAATTCATGCGGCCTTTCTTCTGGATCTCCTACCTCCGCCGGTCGAAAGCTCCATTTCGATGAAAAACACATCCACCAGTACGGAGCCATCATCGGTTTCTTCAAATCTCATGGATTCGAGTATCCACAGATCTCCAATTTGATCTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTAATTTTATCAACCCCATGGGTGCTTAGCAAAAGCTTAGATTCCCAGTTGAAACCATCATTTTTTTTCATTAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTGTTATTTATCGTTTTCCAAGCCTTCTAATTAGTGATTGGCGGGGTAATTTTAAATCTAGCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAAAGAAGATGATTGCATTGAACCCTAGAACTTTTATGCAAAAGGCTGATAGAATGATTGATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTTCAGCATTTAAGAGATATCCATTTTATTTAACATGCTCAGAGGAGAAATTGAGGGATGTTGCAGATTTTTGTTTGAACGCTGCAAAGTTGGATCCAGTAACTCTAATTACTTACCCTGAGTTCTTCAAGTCTTCAATCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATAAAAAAGATTGGTCCGGTGCTTTTACGAGGGGAGAGAGAATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGTCGCAGCCGAAACCAAAAGTGTTGTATAGGATTGGAAAGTTGTAAGTTAACAATGTTCTTATAGTTTAAATTTGAGCATCATGATCTTCAAAAGGGGAGAGCATTTTTGTTGTTATTGAGCCTACTGTTCTGTTTCAAACAACACTACCTCTTGAGCTTTTCAAAATCTCTCTCTCTCTCTCTCTCTGTGTGTTTTCAGGTGGAGAGTTGTGTTGTTTTTGCATCCAAATCAAGGCAGTTAGGTACGTAAATCTATTTGATGTATATTTTGTTCATAGACATGTTAAACTTGAAATTGGAGGCCTTTCTGCTTCAACTTTTGTAAGTTTGTAGACTAATTTTTGAATCTAATGATCTTGAAATAGGGGTAGCTTTTTTTCATTCCTATTGTGAGATGACAGACATTAGAGTTATAGATAAACTTCACACACTTTCAACTATACCCTCCCGCTCTCAACATACTACAAAATCTCAAAACCTCATTCTTCCATTTATGTGTTCTCTCCCTGTAATTATCCTCTTCATCGTTCCAATCCCAACAATTAATATGTTTACAGCACTTCCGACCACCGTAATCCTTTTTCTGACCTCGAAATCTTATTCCTAACCCAAAAATACCAACCAAACTACCTAACTCTCCGGCCACATTCTGCCATATAATTTCTTAATTTCACCTCACAAATCTTAAAAAATCCAAGCCCTTCCATCTTTCAAATTGGCTGCCAAAATTTTAAATAAGCCAATCCAGGTTTCTTCACAGTGAGGGAAAAATTCCAACTTTCTTTTGATATAAACTCTCAAGATTTTCATTTGTTGCAGCAAGTTTCTAGAGAGGACCAAATAAAGAAAAGGTTTAAAATTAGATAAGTTTCCTTTTTCTAAAACAATTTTTAAGTTTAGTTTTGAAAATTGGAAATATGGAAACTTTTGAATTAAACCAATGGTTAAAACAATCATTTGCAAAATTAAAAGTTTAATTAACGATCAAAAGGGTGTAGATGGTCATCAAACAAGATCAACAACATTGATTACATGTAACAAGAAAGAACGATAGAAAAAACATAATTGAAAAATGGAGAGAAAACAAATATAAATAAATTAACTAAAAGGGAAAATTGAAATGATTATAACCAAATATGTAATTGATTCTTAGTTTAATTTTATAATCACCACTTTTCTTCATACATTTTAAATTTTACCTTAATTATATTATTTAACCTATATTACATATAGTTATTTGAAAAGGGAAAACAAACAAACAAATAAATCCTAATTAATAAAAACTAATTTCACTTTTCCTTTTTTATTAACAAAATTTGAGTAAAATGTGAGTTCTTATTTCATCCTTCCTTACCCTTTTCTTTTTTAAGGAAAAAAGTAAATTAAACATATATGTATATATATTCATTAATTTAAAAGTAGAATATGATTTAAACATTCTAAGATGATCAATAGTTAAAACCAGCCATTCTTGCACATGGTGACATTTCTTGTTAAAGGGAAAACCAAATTAGACAAAAACATTTTTAAAAAGATAACTTATGATATATATATATTTTTTGCATATCGGTAAAATTAGTGATATCATAGGACTATTAGACACCAATTAAATGACTATTGTTATTGACTCTTAAATTTTACTTTTAAAATTTAGAAAATGTAGTGACATGAATTTTATTATCATAATTTTTTTTTTTTTTTTTACTATTTTTGTAAAAATCCCAATATAATGTCAGAATCTAAAGAACAAGATACACAGGAAGAAAAGCATAGCAATAAGTGTAATTATTCCTTATAGTTTACACAGCGTAACGAGAGACTGTTTAGAGGTTCTAAAGCCAAGTTCTCATGTTGCATACTATAGTCGATAAAAGTCTCATTGGTAATCCTAAAATGGCTCAAGAAAGTTATCAAGGGAAGAGAATACAATTTCTTTTTCACACTTTAGATAAAAGTTTAATTTATTATTAAGGATAGTTGCAAATTTAGCAATTAGATTCAAAACAATTAACATTATAGCAACATTTTAAAAATTTTGCAAATATAGCAAAATTTGTCAAATTCTACTCATGATAAACTATGTTGCATTATTATTCCGGGTCAATTTCAATTTTGGTTATTATTAATAGATTTTTTTTTTTTTTTTTTTGTTTGGGTGTGGTTTAGGTGAAGGCTAGGTGACTAAGTGTGACGACGAGAAATGTGAAAGAATTGAGAGAACAACAGAATACACAAAAGGAAGAGTCGGGCGATGGGCCAAACAGACCCAGTGGCTTTTCTGCTCTCTGTGGGGATCTTCGCTTCGTTGAGCTCAAAACCCTAACCAAAACCCACCCTTCATTTTCTTCATTTTCTTCATTTTCTTCGTTCCAAATCACAATATGTCCAAATTTTCCTCCACATCTCTTCTACATTTCATCCATAAACGTTTTCTTAATACCATTTCTACTTCTACGTTGCCTTCACCCTCTTTTTCTACCATCCAGTTCCTCACTAATTCATGCGGCCTTTCTTCAGGATCTCCTACCTCCGGCGGTCGAAAGCTCCAATTCGATGAAAAACACATCCACCAGTACGAAGCCATTATCGGTTTCTTGAAATCTCATGGATTCCAGTATCCACAGATCGCCAAATTGATCTCGAGGCGACCTTCGATCCTTCAATCCAAAGTATCCAACAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTACTTCTATCAACCCCATGGGTTCTTGGCAGCAGCTTAGATTCTCAGTTGAAACCATCTTTTTTTGTCATAAAGGAAATGCTTGAATCGGATGAACAAGTAATTGCTGCTATTTCTCGTTTTCCAAGCCTACTAATTTATAATTTGAAGGGTAATTTTAAATCTATCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAGCGAAAATGATTGCATTGAACCCTAGAACTTCTATGCAAAAGGCTGATAGAATGATTCTTGCAGTGAAAACGGTTAAAGAATCAGGCATTGAACCAAAGGCTCCCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAACGAATCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTTCAGCATTTAAGAAATATCCATATTATTTAACTTGTTCAGAGGAGAAATTGAGGAATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATAGAGAAACTCTAATTACTTACCCTATGTTCTTCAACACTTCACTCGACAAGCGGCTCTATCCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGAACACAAAGATTGCTCGGGTTATTTTACTACGAGGGGAGAAAGAATTTATGGAGAAATACGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTTGCAGCCGAAACCAAATCTGTTCTATAGGATTGCAAAGATGTAAGTTAACAATGTTCTTATATTTTTGAATTTGAGCATCATGATCTTCAAAAGGGAGAGCACTTTTGTTGTTATTGAGCCTACTGTTCTGTTTCAAATAACACTGCTTCTTGAGCTTTTCAAGATCTCTCTCTGTGTTTTCAGGTGGGAGAGCTGTGTTGTTTTTGCATCCAAATTAAGGCTGTTAGTCAGGTAAATCTATTTGGTGTATATTTCTTTCTTTGGACATGTTAATCTTGAAATAGGAGGCCTTTTTGTTTTCCCCTTTTCTAATCTTTTACTCTTTCCTTGAACTTTTGTAAGTTTGTAGACTAATTTTGAATCTAATTGCGTTGAAATAGGGGTGGCTTTTTTTCATTCCTATTGTGGGATGACAAACATTAGACTTATAGATAAACTTCACACACTTCAAAAATTCAAGTCCTTCATCTTTCAACACAAATATACACCTTTTTGAGCCAATAGTTTTAAATAAGTCAATCCAGGCTTCTCCACATTGAGGGAAACATTCCAACATTTCTTTTCAATATAAACTCAAGATTTGGGGCTATTGTTCCCCAGAAGATTACCGAAG

Coding sequence (CDS)

TCCGGTTTCGTCTCGGCGGGGTGCGGTGGGGATGTTCGCGGAGCTCAAAACCCTAACCAAAACCCTTCCTTCATTTTCTTCATTCTAACCCCCAATATGTTCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCATAAACGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTCACCCTCTCTTTCTACCATCCAATTCCTCACTAATTCATGCGGCCTTTCTTCTGGATCTCCTACCTCCGCCGGTCGAAAGCTCCATTTCGATGAAAAACACATCCACCAGTACGAAGCCATTATCGGTTTCTTGAAATCTCATGGATTCCAGTATCCACAGATCGCCAAATTGATCTCGAGGCGACCTTCGATCCTTCAATCCAAAGTATCCAACAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTACTTCTATCAACCCCATGGGTTCTTGGCAGCAGCTTAGATTCTCAGTTGAAACCATCTTTTTTTGTCATAAAGGAAATGCTTGAATCGGATGAACAAGTAATTGCTGCTATTTCTCGTTTTCCAAGCCTACTAATTTATAATTTGAAGGGTAATTTTAAATCTATCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAGCGAAAATGATTGCATTGAACCCTAGAACTTCTATGCAAAAGGCTGATAGAATGATTCTTGCAGTGAAAACGGTTAAAGAATCAGGCATTGAACCAAAGGCTCCCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAACGAATCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTTCAGCATTTAAGAAATATCCATATTATTTAACTTGTTCAGAGGAGAAATTGAGGAATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATAGAGAAACTCTAATTACTTACCCTATGTTCTTCAACACTTCACTCGACAAGCGGCTCTATCCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGAACACAAAGATTGCTCGGGTTATTTTACTACGAGGGGAGAAAGAATTTATGGAGAAATACGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTTGCAGCCGAAACCAAATCTGTTCTATAG

Protein sequence

SGFVSAGCGGDVRGAQNPNQNPSFIFFILTPNMFKISSTFLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEKHIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHKLLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDILASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNESTWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPMFFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMDIYRGNVAAETKSVL

Homology

[Close]

BLAST of Cucsat.G9609.T17 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-13
Identity = 62/256 (24.22%), Postives = 114/256 (44.53%), Query Frame = 0


Query: 101 IGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHKLLLSTPWV 160
           + +L S G ++  I +++ R+P ILQ  V NNLK    FL  +G     + +++ +TP +
Sbjct: 223 LDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSL 282

Query: 161 LGSSLDSQLKPSF-FVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDILASE-GVP 220
              S+++ L+P+  ++I+E+   +  V   +   P +L+  L   + +    L+ E G P
Sbjct: 283 FSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAP 342

Query: 221 SRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNESTWKKKI 280
             ++ KM+  +P+      D            G  P                      +I
Sbjct: 343 RDSVVKMVKKHPQLLHYSID-----------DGFLP----------------------RI 402

Query: 281 NVLKSLGWSENEIFSAFKKYPYYLTCS-EEKLRNVADFCFNTAKLDRETLITYPMFFNTS 340
           N L+S+G   ++I          L+ S E+ L+    +  N    +   L  YPM+ + S
Sbjct: 403 NFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLS 445

Query: 341 LDKRLYPRYKVLEVLK 354
           LD+R+ PR++ L  LK
Sbjct: 463 LDQRIRPRHRFLVELK 445

[Close]

BLAST of Cucsat.G9609.T17 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.6e-11
Identity = 74/304 (24.34%), Postives = 129/304 (42.43%), Query Frame = 0


Query: 103 FLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHKLLLSTPWVLG 162
           +L   G    QI  +  +  +     +   +KP  EFL ++G     +  +L   P + G
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 163 SSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDILASEGVPSRNI 222
            SL   LKP+   ++ +     Q    ISRFP++L Y+ +    S  + L+  G+    I
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQI 321

Query: 223 AKMIALNPR-TSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNESTWKKKINVL 282
            +++   P   S    D++   ++  +   ++    +        LS+ ES  K      
Sbjct: 322 GRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSI-ESNLKPVTEFF 381

Query: 283 KSLGWSENEIFSAFKKYPYYLTCS-EEKLRNVADFCFNTAKLDRETLITYPMFFNTSLDK 342
              G+  +EI     +Y    T S +E +    D+ F T    +  L+ +P FF  SL +
Sbjct: 382 LEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSLQE 441

Query: 343 RLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMDIYRGNVAA 402
           R+ PRY++++   V+ LL      +V+ L G +   EK V K       +M +   NV A
Sbjct: 442 RIKPRYELVQRSGVRLLLN-----QVLSLSGIE--FEKVVKK------KMMKLVSNNVIA 489

Query: 403 ETKS 405
           E  S
Sbjct: 502 EQSS 489

[Close]

BLAST of Cucsat.G9609.T17 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.6e-09
Identity = 50/250 (20.00%), Postives = 104/250 (41.60%), Query Frame = 0


Query: 101 IGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHKLLLSTPWV 160
           I +L   G    Q+  +I+R P +L  +V   +KP  E L+ IG     + +++   P+V
Sbjct: 220 IAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYV 279

Query: 161 LGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDILASE-GVPS 220
           LG  L+ ++KP+   + E     E +   ++++P +L   L+    +   +  S   V S
Sbjct: 280 LGFGLEDKVKPNIEALLEFGVRKEALAFIVAQYPDILGIELRDKLATQQSLFESSILVSS 339

Query: 221 RNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNESTWKKKIN 280
            +  ++I   P+                                   +S+  +   K +N
Sbjct: 340 EDFGRVIERMPQA----------------------------------ISLGRTAVLKHVN 399

Query: 281 VLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPMFFNTSLD 340
            L S G+  +++       P  L  + + ++   ++  N  + D E L+ +P FF   L+
Sbjct: 400 FLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTYGLE 435

Query: 341 KRLYPRYKVL 350
             + PR++++
Sbjct: 460 STVRPRHEMV 435

[Close]

BLAST of Cucsat.G9609.T17 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.3e-08
Identity = 53/253 (20.95%), Postives = 107/253 (42.29%), Query Frame = 0


Query: 98  EAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHKLLLST 157
           E  I +LK  G    ++ +L++ +P ++   +    KP  ++   +G     + ++L+  
Sbjct: 353 EKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVK 412

Query: 158 PWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKS-ISDILASEG 217
           P +    L+  + P    ++EM   +E +   + +FPSLL  +L    +  +  +L   G
Sbjct: 413 PILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAG 472

Query: 218 VPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNESTWKK 277
           V  ++I K+IA++P          +L       + +EP    +I                
Sbjct: 473 VTQKDIGKVIAMDP---------ALLGCSI--GTKLEPNMRYYI---------------- 532

Query: 278 KINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPMFFNT 337
                 SLG    ++      +P  L  + + LR    +   T     + LI +P FF+ 
Sbjct: 533 ------SLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSY 572

Query: 338 SLDKRLYPRYKVL 350
           SL++R+ PR+ ++
Sbjct: 593 SLERRIIPRHTIM 572

[Close]

BLAST of Cucsat.G9609.T17 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.2e-08
Identity = 49/249 (19.68%), Postives = 106/249 (42.57%), Query Frame = 0


Query: 101 IGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHKLLLSTPWV 160
           + +L   G    Q+  +I+R P +L  +V   +KP  E L+ IG     + +++   P+V
Sbjct: 211 VAYLVGIGVGRRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYV 270

Query: 161 LGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDILASEGVPSR 220
           LG  L  ++KP+   + ++    E + + + ++P +L   L+    +   +  S  + SR
Sbjct: 271 LGFGLQEKVKPNIEALVDIGVRKEALASIVMQYPDVLGLELRDKLVAQQSLFESSILVSR 330

Query: 221 NIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNESTWKKKINV 280
                +           +RM             P+A          +S+  +   K +N 
Sbjct: 331 EDFGRV----------LERM-------------PQA----------ISLGRAAVLKHVNF 390

Query: 281 LKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPMFFNTSLDK 340
           L + G+  +++       P  L  + + +R   ++  N  + D E L+ +P FF   ++ 
Sbjct: 391 LTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTYGIES 426

Query: 341 RLYPRYKVL 350
            + PR++++
Sbjct: 451 TVRPRHEMV 426

[Close]

BLAST of Cucsat.G9609.T17 vs. NCBI nr
Match: XP_031741662.1 (transcription termination factor MTERF9, chloroplastic [Cucumis sativus] >KAE8648646.1 hypothetical protein Csa_008275 [Cucumis sativus])

HSP 1 Score: 709 bits (1831), Expect = 1.27e-256
Identity = 368/374 (98.40%), Postives = 368/374 (98.40%), Query Frame = 0


Query: 33  MFKISSTFLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 92
           M K SST LLHFIHKRFLNTISTSTLPSPS STIQFLTNSCGLSSGSPTS GRKL FDEK
Sbjct: 1   MSKFSSTSLLHFIHKRFLNTISTSTLPSPSFSTIQFLTNSCGLSSGSPTSGGRKLQFDEK 60

Query: 93  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 152
           HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK
Sbjct: 61  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 120

Query: 153 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDIL 212
           LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDIL
Sbjct: 121 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDIL 180

Query: 213 ASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNES 272
           ASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNES
Sbjct: 181 ASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNES 240

Query: 273 TWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPM 332
           TWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPM
Sbjct: 241 TWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPM 300

Query: 333 FFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMD 392
           FFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMD
Sbjct: 301 FFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMD 360

Query: 393 IYRGNVAAETKSVL 406
           IYRGNVAAETKSVL
Sbjct: 361 IYRGNVAAETKSVL 374

[Close]

BLAST of Cucsat.G9609.T17 vs. NCBI nr
Match: XP_011655534.2 (transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus] >KAE8648645.1 hypothetical protein Csa_007996 [Cucumis sativus])

HSP 1 Score: 615 bits (1585), Expect = 3.73e-219
Identity = 324/375 (86.40%), Postives = 342/375 (91.20%), Query Frame = 0


Query: 33  MFKISSTFLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 92
           M KISST LLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK
Sbjct: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60

Query: 93  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 152
           HIHQY AIIGF KSHGF+YPQI+ LISRRPSILQS+VS NLKPKFEFLQEIGFVGPLLHK
Sbjct: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120

Query: 153 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAA-ISRFPSLLIYNLKGNFKSISDI 212
           L+LSTPWVL  SLDSQLKPSFF IKE+LESDEQV AA I RFPSLLI + +GNFKS SDI
Sbjct: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180

Query: 213 LASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNE 272
           LASEGVPSRNI KMIALNPRT MQKADRMI AVKTVKE GIEPKA MFIYALFVRLSMN+
Sbjct: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240

Query: 273 STWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYP 332
           STWKKKINV+KSLGWSE EIFSAFK+YP+YLTCSEEKLR+VADFC N AKLD  TLITYP
Sbjct: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300

Query: 333 MFFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM 392
            FF +S++KRL PRYKVLEVLKVKNLLK  KI  V LLRGE+EF+EKYVVKHLDEIPNLM
Sbjct: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPV-LLRGEREFVEKYVVKHLDEIPNLM 360

Query: 393 DIYRGNVAAETKSVL 406
           DIYRGNVAAETKSV+
Sbjct: 361 DIYRGNVAAETKSVV 374

[Close]

BLAST of Cucsat.G9609.T17 vs. NCBI nr
Match: XP_008445932.1 (PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15810.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 550 bits (1416), Expect = 1.95e-193
Identity = 284/375 (75.73%), Postives = 325/375 (86.67%), Query Frame = 0


Query: 33  MFKISSTFLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 92
           M KISS+FLLHF H RFLNT+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 93  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 152
           HI QY A+I FLKSHGF+  QIA L+S+RPSILQSKVS NLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 153 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDIL 212
           L+LSTPWVLGSSLDSQLKPSFF +K++LESDEQV AAI RFPSLL+ +LKGN KS  D+L
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGNLKSNIDVL 180

Query: 213 ASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNES 272
           ASEGVPSRNIAKMI ++PRT MQK DRMI  VK VKE GIEPK   F++A+ +R S+++S
Sbjct: 181 ASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSDS 240

Query: 273 TWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPM 332
           TWKKKINV+KSLGWSENEI +AFKK P YL+CSEEKLR+V DFC NTAKLD ET+I+YP 
Sbjct: 241 TWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYPT 300

Query: 333 FFNTSLDKRLYPRYKVLEVLKVKNLLKNT-KIARVILLRGEKEFMEKYVVKHLDEIPNLM 392
            F ++LDKRL PR+K+LE LKVK+LLKN  KI R  L+RGE+EF+E+YVVKHLD+IPNLM
Sbjct: 301 LFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRA-LVRGEREFVERYVVKHLDKIPNLM 360

Query: 393 DIYRGNVAAETKSVL 406
           DIYRGNVA ETKSVL
Sbjct: 361 DIYRGNVATETKSVL 374

[Close]

BLAST of Cucsat.G9609.T17 vs. NCBI nr
Match: XP_008445929.1 (PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis melo] >KAA0034114.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15807.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 546 bits (1406), Expect = 6.24e-192
Identity = 287/374 (76.74%), Postives = 322/374 (86.10%), Query Frame = 0


Query: 33  MFKISSTFLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 92
           M ++SS+FLLHFI  RFLNTISTSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 93  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 152
           +  QY A+I FLKSHGF+  QIA L+SRRPSILQSKVS NLKP+FEFLQEIG VG LL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGTLLLK 120

Query: 153 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDIL 212
            +LSTPWVLGSSLDSQLKPSF  +KE+LESDEQV AAI R+PSLLI +LK N K   D+L
Sbjct: 121 CILSTPWVLGSSLDSQLKPSFIFLKEILESDEQVTAAICRYPSLLICDLKVNLKPQLDVL 180

Query: 213 ASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNES 272
           ASEGVPSRNIAKMI +NPR+ MQK DRM LAVKTVKE GIEPKA MF+YA+ +RLSM++S
Sbjct: 181 ASEGVPSRNIAKMIEMNPRSIMQKVDRMTLAVKTVKELGIEPKARMFVYAVLIRLSMSDS 240

Query: 273 TWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPM 332
           TWKKKINV+KSLGWSE EIF AFK++P YL CSE+K+R+VADFCFNTAKLD  TL++YP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFIAFKRHPNYLGCSEKKIRDVADFCFNTAKLDPGTLVSYPK 300

Query: 333 FFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMD 392
            F  SL+KRL  RYKVLEVLKVKNLLKN KIA + L +GEK F+EKYVVKHLDEIPNLMD
Sbjct: 301 LFRLSLEKRLPLRYKVLEVLKVKNLLKNKKIAGLFL-QGEKTFVEKYVVKHLDEIPNLMD 360

Query: 393 IYRGNVAAETKSVL 406
           IYRGNV A+TKSVL
Sbjct: 361 IYRGNVEAKTKSVL 373

[Close]

BLAST of Cucsat.G9609.T17 vs. NCBI nr
Match: XP_008446995.1 (PREDICTED: transcription termination factor MTERF5, chloroplastic-like [Cucumis melo] >KAA0034133.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15786.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 545 bits (1405), Expect = 8.86e-192
Identity = 281/373 (75.34%), Postives = 321/373 (86.06%), Query Frame = 0


Query: 33  MFKISSTFLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 92
           M K+SS+FLLHF   RFLNT+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 93  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 152
           HI QY A+I FLKSHGF+  QIAKL+ R PSILQSKVSNNLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120

Query: 153 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDIL 212
           L++S+PWVL SSLDS LKPS F ++E+LESDE+VIA + RFP LL + LKG  KS  D+L
Sbjct: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180

Query: 213 ASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNES 272
            SEG+PSRNIAKMIA+ P T M K DRMI  VKTVKE GIEPKA MF+YA+ VRLSM++S
Sbjct: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240

Query: 273 TWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPM 332
           TWKKKINV+KSLGWSE EIF+AFK+YP YLTC+EEK+R+VADFCFNTAKLD   LI+YP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFTAFKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300

Query: 333 FFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMD 392
            F  SLDKR+ PRYKVLEVLKVK+LL+N KIARV L +GE+EF++ YVVK+LD+IPNLMD
Sbjct: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARV-LAQGEREFVKTYVVKYLDKIPNLMD 360

Query: 393 IYRGNVAAETKSV 405
           IYRGN+AAETKSV
Sbjct: 361 IYRGNIAAETKSV 372

[Close]

BLAST of Cucsat.G9609.T17 vs. ExPASy TrEMBL
Match: A0A5D3CWR8 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003140 PE=3 SV=1)

HSP 1 Score: 550 bits (1416), Expect = 9.44e-194
Identity = 284/375 (75.73%), Postives = 325/375 (86.67%), Query Frame = 0


Query: 33  MFKISSTFLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 92
           M KISS+FLLHF H RFLNT+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 93  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 152
           HI QY A+I FLKSHGF+  QIA L+S+RPSILQSKVS NLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 153 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDIL 212
           L+LSTPWVLGSSLDSQLKPSFF +K++LESDEQV AAI RFPSLL+ +LKGN KS  D+L
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGNLKSNIDVL 180

Query: 213 ASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNES 272
           ASEGVPSRNIAKMI ++PRT MQK DRMI  VK VKE GIEPK   F++A+ +R S+++S
Sbjct: 181 ASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSDS 240

Query: 273 TWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPM 332
           TWKKKINV+KSLGWSENEI +AFKK P YL+CSEEKLR+V DFC NTAKLD ET+I+YP 
Sbjct: 241 TWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYPT 300

Query: 333 FFNTSLDKRLYPRYKVLEVLKVKNLLKNT-KIARVILLRGEKEFMEKYVVKHLDEIPNLM 392
            F ++LDKRL PR+K+LE LKVK+LLKN  KI R  L+RGE+EF+E+YVVKHLD+IPNLM
Sbjct: 301 LFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRA-LVRGEREFVERYVVKHLDKIPNLM 360

Query: 393 DIYRGNVAAETKSVL 406
           DIYRGNVA ETKSVL
Sbjct: 361 DIYRGNVATETKSVL 374

[Close]

BLAST of Cucsat.G9609.T17 vs. ExPASy TrEMBL
Match: A0A1S3BEP9 (uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=3 SV=1)

HSP 1 Score: 550 bits (1416), Expect = 9.44e-194
Identity = 284/375 (75.73%), Postives = 325/375 (86.67%), Query Frame = 0


Query: 33  MFKISSTFLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 92
           M KISS+FLLHF H RFLNT+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 93  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 152
           HI QY A+I FLKSHGF+  QIA L+S+RPSILQSKVS NLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 153 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDIL 212
           L+LSTPWVLGSSLDSQLKPSFF +K++LESDEQV AAI RFPSLL+ +LKGN KS  D+L
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGNLKSNIDVL 180

Query: 213 ASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNES 272
           ASEGVPSRNIAKMI ++PRT MQK DRMI  VK VKE GIEPK   F++A+ +R S+++S
Sbjct: 181 ASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSDS 240

Query: 273 TWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPM 332
           TWKKKINV+KSLGWSENEI +AFKK P YL+CSEEKLR+V DFC NTAKLD ET+I+YP 
Sbjct: 241 TWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYPT 300

Query: 333 FFNTSLDKRLYPRYKVLEVLKVKNLLKNT-KIARVILLRGEKEFMEKYVVKHLDEIPNLM 392
            F ++LDKRL PR+K+LE LKVK+LLKN  KI R  L+RGE+EF+E+YVVKHLD+IPNLM
Sbjct: 301 LFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRA-LVRGEREFVERYVVKHLDKIPNLM 360

Query: 393 DIYRGNVAAETKSVL 406
           DIYRGNVA ETKSVL
Sbjct: 361 DIYRGNVATETKSVL 374

[Close]

BLAST of Cucsat.G9609.T17 vs. ExPASy TrEMBL
Match: A0A5D3CV65 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003110 PE=3 SV=1)

HSP 1 Score: 546 bits (1406), Expect = 3.02e-192
Identity = 287/374 (76.74%), Postives = 322/374 (86.10%), Query Frame = 0


Query: 33  MFKISSTFLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 92
           M ++SS+FLLHFI  RFLNTISTSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 93  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 152
           +  QY A+I FLKSHGF+  QIA L+SRRPSILQSKVS NLKP+FEFLQEIG VG LL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGTLLLK 120

Query: 153 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDIL 212
            +LSTPWVLGSSLDSQLKPSF  +KE+LESDEQV AAI R+PSLLI +LK N K   D+L
Sbjct: 121 CILSTPWVLGSSLDSQLKPSFIFLKEILESDEQVTAAICRYPSLLICDLKVNLKPQLDVL 180

Query: 213 ASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNES 272
           ASEGVPSRNIAKMI +NPR+ MQK DRM LAVKTVKE GIEPKA MF+YA+ +RLSM++S
Sbjct: 181 ASEGVPSRNIAKMIEMNPRSIMQKVDRMTLAVKTVKELGIEPKARMFVYAVLIRLSMSDS 240

Query: 273 TWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPM 332
           TWKKKINV+KSLGWSE EIF AFK++P YL CSE+K+R+VADFCFNTAKLD  TL++YP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFIAFKRHPNYLGCSEKKIRDVADFCFNTAKLDPGTLVSYPK 300

Query: 333 FFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMD 392
            F  SL+KRL  RYKVLEVLKVKNLLKN KIA + L +GEK F+EKYVVKHLDEIPNLMD
Sbjct: 301 LFRLSLEKRLPLRYKVLEVLKVKNLLKNKKIAGLFL-QGEKTFVEKYVVKHLDEIPNLMD 360

Query: 393 IYRGNVAAETKSVL 406
           IYRGNV A+TKSVL
Sbjct: 361 IYRGNVEAKTKSVL 373

[Close]

BLAST of Cucsat.G9609.T17 vs. ExPASy TrEMBL
Match: A0A1S3BDU9 (transcription termination factor MTERF8, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488808 PE=3 SV=1)

HSP 1 Score: 546 bits (1406), Expect = 3.02e-192
Identity = 287/374 (76.74%), Postives = 322/374 (86.10%), Query Frame = 0


Query: 33  MFKISSTFLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 92
           M ++SS+FLLHFI  RFLNTISTSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 93  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 152
           +  QY A+I FLKSHGF+  QIA L+SRRPSILQSKVS NLKP+FEFLQEIG VG LL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGTLLLK 120

Query: 153 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDIL 212
            +LSTPWVLGSSLDSQLKPSF  +KE+LESDEQV AAI R+PSLLI +LK N K   D+L
Sbjct: 121 CILSTPWVLGSSLDSQLKPSFIFLKEILESDEQVTAAICRYPSLLICDLKVNLKPQLDVL 180

Query: 213 ASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNES 272
           ASEGVPSRNIAKMI +NPR+ MQK DRM LAVKTVKE GIEPKA MF+YA+ +RLSM++S
Sbjct: 181 ASEGVPSRNIAKMIEMNPRSIMQKVDRMTLAVKTVKELGIEPKARMFVYAVLIRLSMSDS 240

Query: 273 TWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPM 332
           TWKKKINV+KSLGWSE EIF AFK++P YL CSE+K+R+VADFCFNTAKLD  TL++YP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFIAFKRHPNYLGCSEKKIRDVADFCFNTAKLDPGTLVSYPK 300

Query: 333 FFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMD 392
            F  SL+KRL  RYKVLEVLKVKNLLKN KIA + L +GEK F+EKYVVKHLDEIPNLMD
Sbjct: 301 LFRLSLEKRLPLRYKVLEVLKVKNLLKNKKIAGLFL-QGEKTFVEKYVVKHLDEIPNLMD 360

Query: 393 IYRGNVAAETKSVL 406
           IYRGNV A+TKSVL
Sbjct: 361 IYRGNVEAKTKSVL 373

[Close]

BLAST of Cucsat.G9609.T17 vs. ExPASy TrEMBL
Match: A0A5D3CZB3 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002900 PE=3 SV=1)

HSP 1 Score: 545 bits (1405), Expect = 4.29e-192
Identity = 281/373 (75.34%), Postives = 321/373 (86.06%), Query Frame = 0


Query: 33  MFKISSTFLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 92
           M K+SS+FLLHF   RFLNT+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 93  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 152
           HI QY A+I FLKSHGF+  QIAKL+ R PSILQSKVSNNLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120

Query: 153 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDIL 212
           L++S+PWVL SSLDS LKPS F ++E+LESDE+VIA + RFP LL + LKG  KS  D+L
Sbjct: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180

Query: 213 ASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNES 272
            SEG+PSRNIAKMIA+ P T M K DRMI  VKTVKE GIEPKA MF+YA+ VRLSM++S
Sbjct: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240

Query: 273 TWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPM 332
           TWKKKINV+KSLGWSE EIF+AFK+YP YLTC+EEK+R+VADFCFNTAKLD   LI+YP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFTAFKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300

Query: 333 FFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMD 392
            F  SLDKR+ PRYKVLEVLKVK+LL+N KIARV L +GE+EF++ YVVK+LD+IPNLMD
Sbjct: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARV-LAQGEREFVKTYVVKYLDKIPNLMD 360

Query: 393 IYRGNVAAETKSV 405
           IYRGN+AAETKSV
Sbjct: 361 IYRGNIAAETKSV 372

The following BLAST results are available for this feature:

BLAST of Cucsat.G9609.T17 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM80	1.1e-13	24.22	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	8.6e-11	24.34	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	3.6e-09	20.00	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
F4IHL3	2.3e-08	20.95	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
B6TGN4	5.2e-08	19.68	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]

BLAST of Cucsat.G9609.T17 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741662.1	1.27e-256	98.40	transcription termination factor MTERF9, chloroplastic [Cucumis sativus] >KAE864...	[more]
XP_011655534.2	3.73e-219	86.40	transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus] >KA...	[more]
XP_008445932.1	1.95e-193	75.73	PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 tra...	[more]
XP_008445929.1	6.24e-192	76.74	PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis ...	[more]
XP_008446995.1	8.86e-192	75.34	PREDICTED: transcription termination factor MTERF5, chloroplastic-like [Cucumis ...	[more]

BLAST of Cucsat.G9609.T17 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CWR8	9.44e-194	75.73	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BEP9	9.44e-194	75.73	uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=...	[more]
A0A5D3CV65	3.02e-192	76.74	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BDU9	3.02e-192	76.74	transcription termination factor MTERF8, chloroplastic-like OS=Cucumis melo OX=3...	[more]
A0A5D3CZB3	4.29e-192	75.34	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 324..355 e-value: 0.94 score: 18.5 coord: 257..287 e-value: 120.0 score: 11.2 coord: 223..253 e-value: 1200.0 score: 3.3 coord: 151..182 e-value: 6.2 score: 15.8 coord: 115..146 e-value: 1.5E-5 score: 34.5 coord: 292..323 e-value: 110.0 score: 11.4 coord: 187..218 e-value: 160.0 score: 10.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 102..312 e-value: 2.6E-28 score: 98.9 coord: 264..366 e-value: 4.7E-16 score: 58.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 43..398
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 178..389 e-value: 1.6E-36 score: 127.8 coord: 77..177 e-value: 1.5E-18 score: 68.9
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 43..398

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G9609	Cucsat.G9609	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9609.T17.E1	Cucsat.G9609.T17.E1	exon
Cucsat.G9609.T17.E2	Cucsat.G9609.T17.E2	exon
Cucsat.G9609.T17.E3	Cucsat.G9609.T17.E3	exon
Cucsat.G9609.T17.E4	Cucsat.G9609.T17.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9609.T17.C3	Cucsat.G9609.T17.C3	CDS
Cucsat.G9609.T17.C2	Cucsat.G9609.T17.C2	CDS
Cucsat.G9609.T17.C1	Cucsat.G9609.T17.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9609.T17	Cucsat.G9609.T17-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006353	DNA-templated transcription, termination
molecular_function	GO:0003690	double-stranded DNA binding