ASPB Plant Biology 2024, June 22-26, 2024, Honolulu, HI, USA
If you use this database please cite: Yu et al. (2023) CuGenDBv2: An updated database for cucurbit genomics. Nucleic Acids Research 51, D1457-D1464
News
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Genomes of wild watermelons, C. colocynthis, C. amarus and C. mucosospermus, have been published and can now be used without any restrictions. [August 2023] |
| SNPs and small indels called from genome resequencing data (average depth of 53.3x) of the squash core collection comprising 206 accessions are now available for mining [March 2023] |
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Paper describing CuGenDBv2 published in Nucleic Acids Research [Oct 2022] |
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The genome of Cucumis melo var. cantalupensis Charmono is now available in CuGenDBv2 [Oct 2022] |
| The synteny tool has been reimplemented to improve the overall database performance. Link to synteny information of each specific gene is now provided in the gene overview page [Aug 2022] |
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To improve the readability, gene IDs for the following six genomes have been changed: bitter gourd OHB3-1 v2, melon DHL92 v4, bottle gourd Hangzhou v1, monk fruit Qingpiguo v1, sponge gourd (cylindrica) v1, Sponge gourd AG-4 v1 [Aug 2022] |
| A "Genotype" module has been newly developed in CuGenDBv2 that allows to extract, analyze and download large-scale variant data. [June 2022] |
Conferences
Plant and Animal Genome Conference 31, January 12-17, San Diego, CA, USA
Cucurbit Genomics Workshop, 4:00 pm - 6:10 pm, Jan. 12, 2024
Cucurbits 2023, June 11-15, 2023, Zhengzhou, China