Cucsat.G9609.T26 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G9609.T26
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Transcription termination factor MTERF5
Location	ctg1673: 3383481 .. 3386259 (-)
RNA-Seq Expression	Cucsat.G9609.T26
Synteny	Cucsat.G9609.T26

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGGGGAATGGGATGTTCGTGGAGCTCCAAAGCCCTAACCCTAACCCTAACCCTTCAATTTCTTCAATCCAATTCCCAAAATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCATAAACGTTTTCTCACCACCATTTCTACTTCTACATTGCCTTCCCCTCTATTTCTACCGTTCAATTCCTCAAAAATCCATCTGCCCTTTATTCAGGATCTCCTACTCCCAACGGTCCAAAGCTCCAATTCCATGAAATAGACATCCAGCAGTACGGAGCCATTATCGGTTTCTTGAAATCACATGGGTTCGAGAATCCACAGATCGCCAAGTTGGTTTCCAGGCAACCTTCGATCCTTCAATCCAGAGTCGCCACTCTGAAACCTAAATTTGAGATCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGCTAATTCTGTCAAACCCTTCGGTTCTTCACAGGAGCTTAGATTCTCAGTTGAAACCATCATTTCGTATCATAAAGGAAATGCTTGTATCGGATGAAAAGGTAACTGCTGCTATTTTTCGTTGTACGTGGCTTCTAACTTATACTTCCAAGGGTACTATGCGATCTAACATTGATGTTTTGGTTAGTGAGGGAGTACCTTCTAGGAATATCGTGAAATTGATTGAATTGAACCCTAGAACTATTTTGCGAAAGGTTGATTTAATGATTCATGCAGTGGAAACAGTTAAAGAATCAGGGGTTGAACCAAAGGATGGTATGTTTCTTCATGCAGTTAGAGCAGTGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAAATTTCCACCTTACTTCACATGTTCAGAGGAGAAAATGAGGGACGTTGCAGATTTCTGTTCCAACACTGCAATGTTAGATCCAGGAACTCTAATATCTTACCCTGTGTTATTCAAGTATTCAGTCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATCAAAAAGATTGCTTCGGCATTTGTGAAAGGGGAAGGATATTTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGCTGCAGCCGAAACCAAATCTGTTGTATAGGATTGGAAAGCTTGAAGTTTAGATTTGAGCATCATGATCTTCAAAGGGGGAGAGAATTTTTGTGGTTATTGAGCCTTCTGTTTCAGCTAACATTGCTTCTTGAGCCTTTTCAGGTGGGAGAGTTGTGTTGTCTTTCCATCCAAATTAAGACAGGTAAATCTATTTGGTGTACATTTCTTCATAGACGTGTTAATCTTGAAATTGGAGGCCTTTTTGTTTTTCCCTTTCCTAATCTTTTACTCTTTGCTTGAACATTTGTAAGTTTGTAGACTAATTTAGAATCAAATGATATTGAAATAGAGGTGATTTTGTTCATTCATACTATGAGATGAGATGAGAGACATTAGACTTTTTGAATATTCTGAGTTGGACTCTTATTCTTTTGCTATTCCAAATAGATTTTCATATCTTGGGTAAATGACAAACATTGTCATGAAATTCATTTTTATTTAAACGGTTTGAAAATTTCAAACCACTAAAGCTTAATTATAAGGATCATCATAGGCAATATTCGTTAAACTTTCCCACCTCCGTTCGAGTTCTTTTTTTATTATATTTTGTAAATAGTTTGATGGTTGTGAAAATGTTTCCCGGTTATTTTTTCTTTCTTTTTATTCTTTTTATTGTTTTTTTTTCTTTTGGTAAATTCAAGGACTCGAGTCTTCAACTTTAGTGTCTTTATGTAATATGTATAAATAAAACTAATTAAGGTTTAATATTTGTAGGTAGCTTAGTGGTAACTGTGCTTGTCACATGTCAATAAAATTTTGGGATCTGGATTCGCCACTCTATATATATTTGAATGGTTCGATTGAACTTATTCTTAACTTTAGATTAGGGTAGGGAGTTTCGTCTATTAGCGTAAGTTCAATTCACGTAATTGAATATAGTATTGCCATACCATAATATTACATGTAACAACAAGATAAGTTTGATCTTACTTATTTTCTTTGTAGGTGAATGAAGACTTCCTATACTAACTTAAATATCCTAATGCAATAGGATTGGTACCGCATCGTGTGAGAATCTGTTTCACAAGTCAAGAAGAGAATAATCAAGACAAGACTCGCTAGGAAGGTCAAGCCTACAAGAACCTGTGGCAAACCCTAACTTCGGTGACATTCAAGCGCCAACGATATTCACAAAAGCAATGTCACGTATCCATACCCTATGATATTTTTGCAAAAATAAAAGAGTTCAAAAAAATATTTAAATGGATAAATTAGCATTTTTTATACCATTTAAAAGGTTTGTTATTTATATTATGTTTAGTTAGAAACACTTTTGTTATACTCAATGGTGCAAAAACTTGGTTTTTGAAAATATTGGTAGAGAAAACAATATATAGGTATATATGAACATTTTTCTATTGACGAGTACATCTACATGGTGCAAAGAGTACCATAAAATCGATATTGGATTTGCTTTCAGACTACTCCCAATTTACAATTGAGTAGACGTCGATAGGATACTATTGTGTTGTGGATGTTTTGTGAATGACGTCGTGGGCTGCTTGTTTTGCGAGAAATCTGTCATTTGCCAATTTATTTTATTGAGATGGACGTGGAAATGAAGAACAT

Coding sequence (CDS)

ATGTTTCTTCATGCAGTTAGAGCAGTGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAAATTTCCACCTTACTTCACATGTTCAGAGGAGAAAATGAGGGACGTTGCAGATTTCTGTTCCAACACTGCAATGTTAGATCCAGGAACTCTAATATCTTACCCTGTGTTATTCAAGTATTCAGTCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATCAAAAAGATTGCTTCGGCATTTGTGAAAGGGGAAGGATATTTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGCTGCAGCCGAAACCAAATCTGTTGTATAG

Protein sequence

MFLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCSNTAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEKYVVKHLDEIPNLMDIYRGNAAAETKSVV

Homology

[Close]

BLAST of Cucsat.G9609.T26 vs. NCBI nr
Match: XP_031742250.1 (uncharacterized protein LOC116404132 [Cucumis sativus] >XP_031742251.1 uncharacterized protein LOC116404132 [Cucumis sativus])

HSP 1 Score: 298 bits (762), Expect = 1.39e-100
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MFLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCS 60
           MFLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCS
Sbjct: 80  MFLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCS 139

Query: 61  NTAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEK 120
           NTAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEK
Sbjct: 140 NTAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEK 199

Query: 121 YVVKHLDEIPNLMDIYRGNAAAETKSVV 148
           YVVKHLDEIPNLMDIYRGNAAAETKSVV
Sbjct: 200 YVVKHLDEIPNLMDIYRGNAAAETKSVV 227

[Close]

BLAST of Cucsat.G9609.T26 vs. NCBI nr
Match: KAE8648644.1 (hypothetical protein Csa_008356 [Cucumis sativus])

HSP 1 Score: 298 bits (762), Expect = 1.04e-98
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MFLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCS 60
           MFLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCS
Sbjct: 210 MFLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCS 269

Query: 61  NTAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEK 120
           NTAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEK
Sbjct: 270 NTAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEK 329

Query: 121 YVVKHLDEIPNLMDIYRGNAAAETKSVV 148
           YVVKHLDEIPNLMDIYRGNAAAETKSVV
Sbjct: 330 YVVKHLDEIPNLMDIYRGNAAAETKSVV 357

[Close]

BLAST of Cucsat.G9609.T26 vs. NCBI nr
Match: XP_031741759.1 (transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 248 bits (634), Expect = 1.32e-79
Identity = 121/147 (82.31%), Postives = 132/147 (89.80%), Query Frame = 0


Query: 2   FLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCSN 61
           F+HAV  VLSM+DS WKKKINVMKSLGWSENEIFTAFKKFPPY TCSE+K+R+VADFC N
Sbjct: 189 FVHAVTTVLSMSDSNWKKKINVMKSLGWSENEIFTAFKKFPPYLTCSEDKLRNVADFCFN 248

Query: 62  TAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEKY 121
           TA LDPGTLISYPVLFKYSVEKRL+PRYKVLEVLKVKNLLK +K A  F +GE  FVE Y
Sbjct: 249 TAKLDPGTLISYPVLFKYSVEKRLRPRYKVLEVLKVKNLLKNEKSAQLFFRGEREFVENY 308

Query: 122 VVKHLDEIPNLMDIYRGNAAAETKSVV 148
           +VKHLDEIPNLMDIYRGN A+ETKSV+
Sbjct: 309 IVKHLDEIPNLMDIYRGNVASETKSVL 335

[Close]

BLAST of Cucsat.G9609.T26 vs. NCBI nr
Match: KAE8648655.1 (hypothetical protein Csa_008541 [Cucumis sativus])

HSP 1 Score: 248 bits (634), Expect = 4.12e-79
Identity = 121/147 (82.31%), Postives = 132/147 (89.80%), Query Frame = 0


Query: 2   FLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCSN 61
           F+HAV  VLSM+DS WKKKINVMKSLGWSENEIFTAFKKFPPY TCSE+K+R+VADFC N
Sbjct: 227 FVHAVTTVLSMSDSNWKKKINVMKSLGWSENEIFTAFKKFPPYLTCSEDKLRNVADFCFN 286

Query: 62  TAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEKY 121
           TA LDPGTLISYPVLFKYSVEKRL+PRYKVLEVLKVKNLLK +K A  F +GE  FVE Y
Sbjct: 287 TAKLDPGTLISYPVLFKYSVEKRLRPRYKVLEVLKVKNLLKNEKSAQLFFRGEREFVENY 346

Query: 122 VVKHLDEIPNLMDIYRGNAAAETKSVV 148
           +VKHLDEIPNLMDIYRGN A+ETKSV+
Sbjct: 347 IVKHLDEIPNLMDIYRGNVASETKSVL 373

[Close]

BLAST of Cucsat.G9609.T26 vs. NCBI nr
Match: XP_031741755.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucumis sativus] >KGN52212.2 hypothetical protein Csa_007927 [Cucumis sativus])

HSP 1 Score: 246 bits (627), Expect = 5.13e-78
Identity = 124/149 (83.22%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 2   FLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCSN 61
           F+HAVR VLSM DSTWKKKINVMKSLG SE EIF+AFK+FPPY TCSEEK+RDVADFCSN
Sbjct: 228 FVHAVRVVLSMGDSTWKKKINVMKSLGVSEKEIFSAFKRFPPYLTCSEEKLRDVADFCSN 287

Query: 62  TAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEKY 121
           TA LDP +LISYPVLFKYSV KRLQPR KV+EVLK+KNLLKIK+IAS FVKGE  FVEKY
Sbjct: 288 TAKLDPASLISYPVLFKYSVHKRLQPRCKVIEVLKMKNLLKIKRIASVFVKGEKEFVEKY 347

Query: 122 VVKHLDEIPNLMDIYRGN--AAAETKSVV 148
           +VKHLDEIPNLMDIY+GN  A AETKSVV
Sbjct: 348 IVKHLDEIPNLMDIYKGNVEAEAETKSVV 376

[Close]

BLAST of Cucsat.G9609.T26 vs. ExPASy TrEMBL
Match: A0A1S4DW22 (transcription termination factor MTERF5, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488866 PE=3 SV=1)

HSP 1 Score: 233 bits (595), Expect = 9.85e-75
Identity = 113/148 (76.35%), Postives = 126/148 (85.14%), Query Frame = 0


Query: 1   MFLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCS 60
           MF++AV   +SM+DSTWKKKINVMKSLGWSENEIFTAFK+FP + TCSEEKMRD+ADFC 
Sbjct: 134 MFVYAVSVAVSMSDSTWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCL 193

Query: 61  NTAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEK 120
           NTA LDPGTLISYP  F YSV KRLQPRYKVLEVLK+KNLLK K I   FV+GE  FVEK
Sbjct: 194 NTAKLDPGTLISYPQFFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEK 253

Query: 121 YVVKHLDEIPNLMDIYRGNAAAETKSVV 148
           Y+VKH D+IPNL+DIY GN  AETKSV+
Sbjct: 254 YIVKHFDKIPNLIDIYLGNVKAETKSVL 281

[Close]

BLAST of Cucsat.G9609.T26 vs. ExPASy TrEMBL
Match: A0A1S3BEV9 (transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488866 PE=3 SV=1)

HSP 1 Score: 233 bits (595), Expect = 1.55e-73
Identity = 113/148 (76.35%), Postives = 126/148 (85.14%), Query Frame = 0


Query: 1   MFLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCS 60
           MF++AV   +SM+DSTWKKKINVMKSLGWSENEIFTAFK+FP + TCSEEKMRD+ADFC 
Sbjct: 226 MFVYAVSVAVSMSDSTWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCL 285

Query: 61  NTAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEK 120
           NTA LDPGTLISYP  F YSV KRLQPRYKVLEVLK+KNLLK K I   FV+GE  FVEK
Sbjct: 286 NTAKLDPGTLISYPQFFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEK 345

Query: 121 YVVKHLDEIPNLMDIYRGNAAAETKSVV 148
           Y+VKH D+IPNL+DIY GN  AETKSV+
Sbjct: 346 YIVKHFDKIPNLIDIYLGNVKAETKSVL 373

[Close]

BLAST of Cucsat.G9609.T26 vs. ExPASy TrEMBL
Match: A0A1S3CSA2 (uncharacterized protein LOC103504258 OS=Cucumis melo OX=3656 GN=LOC103504258 PE=3 SV=1)

HSP 1 Score: 224 bits (572), Expect = 7.95e-73
Identity = 116/149 (77.85%), Postives = 126/149 (84.56%), Query Frame = 0


Query: 1   MFLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCS 60
           MF +AV   LSM+DSTWKKK+ VMKSLGWSE EIFTAFKK P Y  CSE+KMRDVADFC 
Sbjct: 19  MFAYAVFVRLSMSDSTWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCF 78

Query: 61  NTAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASA--FVKGEGYFV 120
           NTA LDPGT+ISYPV FKYSV+KRL+PRYKVLEVLKVKNLLK KKIA A  F +GE  FV
Sbjct: 79  NTAKLDPGTVISYPVFFKYSVDKRLRPRYKVLEVLKVKNLLKNKKIALAWWFTQGEREFV 138

Query: 121 EKYVVKHLDEIPNLMDIYRGNAAAETKSV 147
           +  VVKHLDEIPNLMDIYRGN A+ETKSV
Sbjct: 139 QNNVVKHLDEIPNLMDIYRGNDASETKSV 167

[Close]

BLAST of Cucsat.G9609.T26 vs. ExPASy TrEMBL
Match: A0A1S4DWY9 (uncharacterized protein LOC107990789 OS=Cucumis melo OX=3656 GN=LOC107990789 PE=3 SV=1)

HSP 1 Score: 223 bits (568), Expect = 6.47e-72
Identity = 112/147 (76.19%), Postives = 123/147 (83.67%), Query Frame = 0


Query: 1   MFLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCS 60
           MF++AV   LS++DS W  KINV+KSLGWSE EIF AFKK P Y  CSE+KMRDVADFC 
Sbjct: 42  MFVYAVLIRLSLSDSNWTNKINVLKSLGWSEKEIFAAFKKDPNYLGCSEKKMRDVADFCF 101

Query: 61  NTAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEK 120
           NTA LDPGT+ISYPV FK SV+KRL+PRYKVLEVLKVKNLLK KKIA   ++GE  FVEK
Sbjct: 102 NTAKLDPGTVISYPVFFKSSVDKRLRPRYKVLEVLKVKNLLKNKKIAGVLLQGEKTFVEK 161

Query: 121 YVVKHLDEIPNLMDIYRGNAAAETKSV 147
           YVVKHLDEIPNLMDIYRGN  AETKSV
Sbjct: 162 YVVKHLDEIPNLMDIYRGNVEAETKSV 188

[Close]

BLAST of Cucsat.G9609.T26 vs. ExPASy TrEMBL
Match: A0A5D3CXX8 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003080 PE=3 SV=1)

HSP 1 Score: 229 bits (583), Expect = 1.00e-71
Identity = 116/147 (78.91%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 2   FLHAVRAVLSMNDSTWKKKINVMKSLGWSENEIFTAFKKFPPYFTCSEEKMRDVADFCSN 61
           F++AV   LSM+DSTWKKKINVMKSLGWS+ EIFTAFK+ P Y  CSEEK+RDVADFC N
Sbjct: 227 FVYAVVVRLSMSDSTWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFN 286

Query: 62  TAMLDPGTLISYPVLFKYSVEKRLQPRYKVLEVLKVKNLLKIKKIASAFVKGEGYFVEKY 121
           TA LDPGTLISYP LFK S +KRL+PRYKVLEVLKVKNLLK KKIAS  V+GE  FVEKY
Sbjct: 287 TAKLDPGTLISYPKLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKY 346

Query: 122 VVKHLDEIPNLMDIYRGNAAAETKSVV 148
           VVKHLDEIPNLMDIY GN  AETKSV+
Sbjct: 347 VVKHLDEIPNLMDIYVGNVEAETKSVL 373

The following BLAST results are available for this feature:

BLAST of Cucsat.G9609.T26 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G9609.T26 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742250.1	1.39e-100	100.00	uncharacterized protein LOC116404132 [Cucumis sativus] >XP_031742251.1 uncharact...	[more]
KAE8648644.1	1.04e-98	100.00	hypothetical protein Csa_008356 [Cucumis sativus]	[more]
XP_031741759.1	1.32e-79	82.31	transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus]	[more]
KAE8648655.1	4.12e-79	82.31	hypothetical protein Csa_008541 [Cucumis sativus]	[more]
XP_031741755.1	5.13e-78	83.22	transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucum...	[more]

BLAST of Cucsat.G9609.T26 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DW22	9.85e-75	76.35	transcription termination factor MTERF5, chloroplastic-like isoform X2 OS=Cucumi...	[more]
A0A1S3BEV9	1.55e-73	76.35	transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumi...	[more]
A0A1S3CSA2	7.95e-73	77.85	uncharacterized protein LOC103504258 OS=Cucumis melo OX=3656 GN=LOC103504258 PE=...	[more]
A0A1S4DWY9	6.47e-72	76.19	uncharacterized protein LOC107990789 OS=Cucumis melo OX=3656 GN=LOC107990789 PE=...	[more]
A0A5D3CXX8	1.00e-71	78.91	Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 35..66 e-value: 120.0 score: 11.0 coord: 67..98 e-value: 0.071 score: 22.2 coord: 1..30 e-value: 190.0 score: 9.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 9..98 e-value: 3.9E-16 score: 58.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 1..140
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 1..131 e-value: 3.6E-25 score: 90.6
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 1..140

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G9609	Cucsat.G9609	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9609.T26.E1	Cucsat.G9609.T26.E1	exon
Cucsat.G9609.T26.E2	Cucsat.G9609.T26.E2	exon
Cucsat.G9609.T26.E3	Cucsat.G9609.T26.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9609.T26.C1	Cucsat.G9609.T26.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9609.T26	Cucsat.G9609.T26-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006353	DNA-templated transcription, termination
molecular_function	GO:0003690	double-stranded DNA binding