Cucsat.G19154 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G19154
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	upstream activation factor subunit spp27-like
Location	ctg3517: 35437 .. 39391 (+)
RNA-Seq Expression	Cucsat.G19154
Synteny	Cucsat.G19154

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCAAAGAGGAGAGAGTAAACGTGGCAAAAAGGGATTGGTCTGTCACCTCACCCACATCCACCCACCGAGCCCCTTGCGGTTACTCACAAAATCCATTTTCTTCATGAATGGACCGCTTTGTCATTTTGTCTTTCTACTCTCACAGAAAGAGAGAGAAAGGAAGAAGCAGAGAGACATAAAGGGAGAGAGAAAGAGAAGACAGAGAGAGTTCTTGAGAGAGAGAGAGAGAGAGAAGGACCGTTAATTTCCGTTAATATATGAAGCAATTTTGAGAGCTACAAGAAGCTAAAATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTCCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTTGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAACTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCCCATCATCACCAACATCACCACCACCACCACCATCAGCAGCAGCAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCGTTTCACACTTTCTCTGCTCAGCCTCCGCCGGCTAAGCCGGATTCCGTCGTTGCTCCCACTGTTCCGGGCTCTGACCCGCCAAAGGAAAGGTGGGGTTCTTTTGGTTTTTTCAATTTTGGGGTTTTGGGTTTCTTTTATTTTTTTTAGTTGCCCTCTTTGATTTACTTATTGTTCGTCTTGGGTGTGTATGTTTGTGTAAATCTGTTTCAATTCTGGAGTGAAGTTGATTTCGTTCTGTTTTGATTGCAATTCTACAGAATTAGTGGAATGGCTTCTCGATTTCTTTGCTTATTCCTTTTCCTTTTTGCAACGGTTACTTCATTCGTTCAGAATTAGGTCGGAAAAGGCAGTGAAGTTGTTCGTTTACTTGCTGTGGACTTTGTTTGGAGGATTTTGGAGTGTAGAGTTCACTGATTAGTGGCATTTGGGTTGGTCTTAGTTTTACTCGAGGGTTTATTGTTAATTTTCCCTTGAGTGTTGACTAGGTTCTGCTTCGTTTTCCTCTGGGTTGAGAAGTTTATTCAGGATTTCTGGTCAGAAATGTGACTTTCTGCTTTTGTCGTGGCTGTTGGAAAAGTAAATTTTCTCTTAATGATGCCTTGTCAAATGTGTGTGCATAGGTATCTACTACGAGCATGCTGAGTTTTCATTTATTTTCTGGTTGTTTCCTTTAATTCGTATTATTTTTGCATTCTTGGTTCTAGTCTGGTCAGCACAGCCAGATACCATATGCGGAAAAAAAAATCTTGGGAATTTGTAACTTTGGATTTGTCCATCAGCATGGTAGTGGATTGGTAGGGAGTTAATAAAATGAGAGATGGAAGCTACCCTAGTTTACTGGAAATGGATATTAATGTATGGCATCTACATGTGAGGAGTCTTTATCGTATGCATACATTTTTCTATAAATATCACTGTAGCTTTGACCTCTCAGCACACTTTTGAAAGTGAACGGCTAGCTCCTTCCCAGTCTGGGCTTACTTTTATTTTGCAATCTAGTAATGTATGTAGCTTCGAGCTTGTAATCTCATGATTTCAATGGCCTTACTAGTGATACCTTTTTAAGTATCGATTACCAGCTGGTAGCCATAAGTATGGAACACTTTGTTGTGTACTATAGAGCTACGAAGTAGAATCTTTCAATTAGTTTTCATTCCATGGAAGGGTGAAATGTTTCATTTACTGTTTTATTCAAAGATTAAAATAATACACGTCTCTCTAGTTCTTAGATCCCAAAGATATATGTTTCGACTGATAAAAGCTCACCTTTAAAACTTGAAAGCAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGGTTTCTATCTCTTTCTTATTTCGTAGTTGTTTGATTCTCAATTTTAGCACTTTATGAGGTTCATATGATGCATCTGTGTTTGTTTCAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAGTAAGTATTCAGTTTGATGCTTCCCTGTCCCCCTAGTTCTGGAAGAAACCAATAGTTTATTTTCTAATCCTGTCAGAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGTTGGCAAATAAACTCTGGAAACTTTCACTTTGTTGCATGCTAGCCATTCACTATTAATACCATCTTTTCAACTTGAGAGATCATTTCTTTGTAAAAATTATGCATACAGGACCCTCTGTAATGGATCTTAAAACATGGGGCATTGTTCTCATATGTCAGATTAACTGTTTTTTCTTCATTAAAATGATCTTGTACTCACATGTCTTGGATCTTAAAAACAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGATAGCTATTCTTCTAGGATGGTTAGTGCATTCTAACTTTCTTATATGTTAAAACTGATGTTAGAGTTGAAGGGTAATTTTGAGTTTCCCCATTGTTGCAATTTGACCTCCTTGCCGGCTTCATCATCATGCACGTTTTCCAAAAACATATTATTTGATTGATTGAAATTTCTTCTAGTGTTGGAGGCTGCTGATTGATAACCTGTTATCACTTGTCCTAGTTGGAAATTTATGATGCAGTATGCAGGATAGTTATAAGAAAATTATTGATATCTTCTTAGGATTAAATATATGAGAGTTTTGGGGATTTTGTCTTAGTTTTATGATGGGTCTGTGGGAACCTTCAATTGGATTCTGTTCTTGTACCATTTGCTGGGATTGATGGCAGGATAAAGAAAAAATGAAAGGAAAAACTGTCGAATTGATTATTACCTCATTTAAATTCACCCAGGACTCTGAAGTTGAAACAAACACAAGCCCTGAAATGGAAAATGTTTACTTGAAACTGATTATTTTGTTTTTGTGCCATATGGAAAGGATAAAAAACCTAAGGTAATAAACTAGGACTTGGAAATTCAGTTAGAAATAGAAAGTCAAGTCAAAGATTAGTGATTTGGAGGTCTCTTATTTATTTTGGTCTCCACAAATCAAATCTGAAAATTTAGTATATGGAATGTATTCTTGTACAAAGTTTTCTTTTTGAGTTCATAGATGCCTTATTTGATTATCTGTAAATGAAGACACAATGATTTGAAGCTTTATTTTGTGCAATCATAGCTTTTCACCCTTGAGGCCCCGTTTAATAATAATTTGGTCCTTCAAAATTAAGTTTATGAATTAAGCTTTTAAATGTTATTCCCACCAATGAGTTCCATTATTTTGTTATATACTTCTCCAAATATTTTCAAATCCAAGCCAAATTTTACAAAACTTGATTTTGTTTTTAGAATTTGATCTTTAGAATCTAATTATTTGTTTAAGAGAGATAAAGTCCAATTTTCAAAATCCAAAAACTAAAACTAAAATTATAATCAAATGGGCCCTTGGTTATTTGAATTTCAATTGACGGTTGTTTTCTTTTTTTCCTTTTCTTCAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAACCGAAGGGATTACCTTCTTTCTGACCGCTTTTTCCA

Coding sequence (CDS)

ATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTCCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTTGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAACTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCCCATCATCACCAACATCACCACCACCACCACCATCAGCAGCAGCAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCGTTTCACACTTTCTCTGCTCAGCCTCCGCCGGCTAAGCCGGATTCCGTCGTTGCTCCCACTGTTCCGGGCTCTGACCCGCCAAAGGAAAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGA

Protein sequence

MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFILRSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQPPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS

Homology

[Close]

BLAST of Cucsat.G19154 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.0e-07
Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 16  EPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWE 75
           E    S +K   VE +     KS  P     V +S++LA+  G    E+ ++EV+RR+W 
Sbjct: 95  EEKNDSETKGTHVEKKKGTVSKS--PISTRKVTLSKSLASLLG--EHELTRTEVVRRLWA 154

Query: 76  YIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRH 119
           YIK ++L++P N   +LCD KL  + G +S +   + ++L  H
Sbjct: 155 YIKAHNLQNPNNKKEILCDEKLELILG-KSTNMFEMHKILASH 192

[Close]

BLAST of Cucsat.G19154 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-05
Identity = 29/102 (28.43%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 21  SSSKKARVENES----AVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEY 80
           S SK+ + +N+S    ++SV+         V++S  L  F G    E+ +++V++ IW+Y
Sbjct: 102 SKSKRKKKKNDSPDSNSISVR--------KVLLSAPLQKFLG--SEELPRTQVVKMIWQY 161

Query: 81  IKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRH 119
           IK + L++P +   +LCD K+  +FG + ++   + ++L +H
Sbjct: 162 IKEHDLQNPKDRREILCDEKMEPIFG-KKMTMFSMNKLLTKH 192

[Close]

BLAST of Cucsat.G19154 vs. ExPASy Swiss-Prot
Match: Q9P7S3 (SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr3 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 23/69 (33.33%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 49  ISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISA 108
           +S+A AN  G+  RE  + +++  +W+YIK + L+D      + CD  LR+LF  + +  
Sbjct: 208 LSKAFANILGI--REGTRPDIVSYLWQYIKFHRLQDMEEKRLINCDKALRDLFEADRLYF 267

Query: 109 LGIPEVLGR 118
             IPE++ R
Sbjct: 268 PRIPELMNR 274

[Close]

BLAST of Cucsat.G19154 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.8e-05
Identity = 27/96 (28.12%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 16  EPTKPSSSKKARVEN--ESAVSVKSAEPSICP---SVIISEALANFFGVDGREMLQSEVL 75
           E  KP+   + R E+  E     ++ +P+  P    + +S  LA F G++  ++ + + +
Sbjct: 85  EGKKPAKRTRKRKEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGLE--QLSRPQTV 144

Query: 76  RRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESI 107
           +++WEYIK + L+DP +   +LCD KL+ +F  +++
Sbjct: 145 KKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTL 178

[Close]

BLAST of Cucsat.G19154 vs. NCBI nr
Match: XP_004150254.1 (angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015454 [Cucumis sativus])

HSP 1 Score: 246 bits (627), Expect = 7.04e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 219 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 278

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 279 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 338

Query: 121 FRRS 124
           FRRS
Sbjct: 339 FRRS 342

[Close]

BLAST of Cucsat.G19154 vs. NCBI nr
Match: XP_031744592.1 (angiomotin isoform X1 [Cucumis sativus])

HSP 1 Score: 246 bits (627), Expect = 7.26e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 220 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 279

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 280 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 339

Query: 121 FRRS 124
           FRRS
Sbjct: 340 FRRS 343

[Close]

BLAST of Cucsat.G19154 vs. NCBI nr
Match: XP_008447697.1 (PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_008447700.1 PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >KAA0048155.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa] >TYK08100.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (627), Expect = 7.26e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 220 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 279

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 280 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 339

Query: 121 FRRS 124
           FRRS
Sbjct: 340 FRRS 343

[Close]

BLAST of Cucsat.G19154 vs. NCBI nr
Match: XP_038900174.1 (uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida])

HSP 1 Score: 241 bits (615), Expect = 3.63e-77
Identity = 121/124 (97.58%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAV VK AEPSICPSVIISEALANFFGVD
Sbjct: 211 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVGVKGAEPSICPSVIISEALANFFGVD 270

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCD KLRELFGCESISALGIPEVLGRHHI
Sbjct: 271 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDGKLRELFGCESISALGIPEVLGRHHI 330

Query: 121 FRRS 124
           FRRS
Sbjct: 331 FRRS 334

[Close]

BLAST of Cucsat.G19154 vs. NCBI nr
Match: XP_038900172.1 (uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_038900173.1 uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida])

HSP 1 Score: 241 bits (615), Expect = 3.74e-77
Identity = 121/124 (97.58%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAV VK AEPSICPSVIISEALANFFGVD
Sbjct: 212 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVGVKGAEPSICPSVIISEALANFFGVD 271

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCD KLRELFGCESISALGIPEVLGRHHI
Sbjct: 272 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDGKLRELFGCESISALGIPEVLGRHHI 331

Query: 121 FRRS 124
           FRRS
Sbjct: 332 FRRS 335

[Close]

BLAST of Cucsat.G19154 vs. ExPASy TrEMBL
Match: A0A0A0LEG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 3.41e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 219 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 278

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 279 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 338

Query: 121 FRRS 124
           FRRS
Sbjct: 339 FRRS 342

[Close]

BLAST of Cucsat.G19154 vs. ExPASy TrEMBL
Match: A0A1S3BI07 (uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 3.51e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 220 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 279

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 280 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 339

Query: 121 FRRS 124
           FRRS
Sbjct: 340 FRRS 343

[Close]

BLAST of Cucsat.G19154 vs. ExPASy TrEMBL
Match: A0A5D3C9T5 (Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002610 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 3.51e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 220 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 279

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 280 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 339

Query: 121 FRRS 124
           FRRS
Sbjct: 340 FRRS 343

[Close]

BLAST of Cucsat.G19154 vs. ExPASy TrEMBL
Match: A0A6J1CGF4 (uncharacterized protein LOC111010586 OS=Momordica charantia OX=3673 GN=LOC111010586 PE=4 SV=1)

HSP 1 Score: 233 bits (593), Expect = 4.24e-74
Identity = 116/124 (93.55%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENES + VK AE SICPSVIISEALA FFGVD
Sbjct: 215 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVD 274

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQ+EVLRRIWEYIKVNHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHI
Sbjct: 275 GREMLQTEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHI 334

Query: 121 FRRS 124
           FRRS
Sbjct: 335 FRRS 338

[Close]

BLAST of Cucsat.G19154 vs. ExPASy TrEMBL
Match: A0A6J1J2D3 (uncharacterized protein LOC111480626 OS=Cucurbita maxima OX=3661 GN=LOC111480626 PE=4 SV=1)

HSP 1 Score: 231 bits (590), Expect = 1.20e-73
Identity = 114/124 (91.94%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHII LEPTKPSSSKKARVENE A++VK+AEPS+CPSVIISEALA+FFGVD
Sbjct: 215 MFKMNKLLAKHIISLEPTKPSSSKKARVENEPAIAVKAAEPSVCPSVIISEALASFFGVD 274

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYI+ NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHI
Sbjct: 275 GREMLQSEVLRRIWEYIRANHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHI 334

Query: 121 FRRS 124
           FRRS
Sbjct: 335 FRRS 338

The following BLAST results are available for this feature:

BLAST of Cucsat.G19154 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q08747	3.0e-07	33.01	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q05024	1.6e-05	28.43	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
Q9P7S3	2.2e-05	33.33	SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
O74503	4.8e-05	28.13	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]

BLAST of Cucsat.G19154 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150254.1	7.04e-79	100.00	angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015...	[more]
XP_031744592.1	7.26e-79	100.00	angiomotin isoform X1 [Cucumis sativus]	[more]
XP_008447697.1	7.26e-79	100.00	PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_038900174.1	3.63e-77	97.58	uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida]	[more]
XP_038900172.1	3.74e-77	97.58	uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_03890017...	[more]

BLAST of Cucsat.G19154 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEG4	3.41e-79	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1	[more]
A0A1S3BI07	3.51e-79	100.00	uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C9T5	3.51e-79	100.00	Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1CGF4	4.24e-74	93.55	uncharacterized protein LOC111010586 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1J2D3	1.20e-73	91.94	uncharacterized protein LOC111480626 OS=Cucurbita maxima OX=3661 GN=LOC111480626...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 43..124 e-value: 1.6E-9 score: 47.6
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 48..118 e-value: 2.3E-19 score: 69.0
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 42..121 score: 19.366796
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 40..123 e-value: 4.0E-21 score: 76.7
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 42..119
None	No IPR available	PANTHER	PTHR13844:SF62	SUBFAMILY NOT NAMED	coord: 1..120
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 1..120
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 47..118 e-value: 3.31997E-21 score: 78.7393

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G19154.T3	Cucsat.G19154.T3	mRNA
Cucsat.G19154.T1	Cucsat.G19154.T1	mRNA
Cucsat.G19154.T2	Cucsat.G19154.T2	mRNA
Cucsat.G19154.T4	Cucsat.G19154.T4	mRNA
Cucsat.G19154.T7	Cucsat.G19154.T7	mRNA
Cucsat.G19154.T11	Cucsat.G19154.T11	mRNA
Cucsat.G19154.T10	Cucsat.G19154.T10	mRNA
Cucsat.G19154.T6	Cucsat.G19154.T6	mRNA
Cucsat.G19154.T5	Cucsat.G19154.T5	mRNA
Cucsat.G19154.T9	Cucsat.G19154.T9	mRNA
Cucsat.G19154.T13	Cucsat.G19154.T13	mRNA
Cucsat.G19154.T8	Cucsat.G19154.T8	mRNA
Cucsat.G19154.T12	Cucsat.G19154.T12	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus