Cucsat.G19154.T13 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G19154.T13
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	upstream activation factor subunit spp27-like
Location	ctg3517: 36305 .. 38839 (+)
RNA-Seq Expression	Cucsat.G19154.T13
Synteny	Cucsat.G19154.T13

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATAAATATCACTGTAGCTTTGACCTCTCAGCACACTTTTGAAAGTGAACGGCTAGCTCCTTCCCAGTCTGGGCTTACTTTTATTTTGCAATCTAGTAATGTATGTAGCTTCGAGCTTGTAATCTCATGATTTCAATGGCCTTACTAGTGATACCTTTTTAAGTATCGATTACCAGCTGGTAGCCATAAGTATGGAACACTTTGTTGTGTACTATAGAGCTACGAAGTAGAATCTTTCAATTAGTTTTCATTCCATGGAAGGGTGAAATGTTTCATTTACTGTTTTATTCAAAGATTAAAATAATACACGTCTCTCTAGTTCTTAGATCCCAAAGATATATGTTTCGACTGATAAAAGCTCACCTTTAAAACTTGAAAGCAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGGTTTCTATCTCTTTCTTATTTCGTAGTTGTTTGATTCTCAATTTTAGCACTTTATGAGGTTCATATGATGCATCTGTGTTTGTTTCAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAGTAAGTATTCAGTTTGATGCTTCCCTGTCCCCCTAGTTCTGGAAGAAACCAATAGTTTATTTTCTAATCCTGTCAGAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGTTGGCAAATAAACTCTGGAAACTTTCACTTTGTTGCATGCTAGCCATTCACTATTAATACCATCTTTTCAACTTGAGAGATCATTTCTTTGTAAAAATTATGCATACAGGACCCTCTGTAATGGATCTTAAAACATGGGGCATTGTTCTCATATGTCAGATTAACTGTTTTTTCTTCATTAAAATGATCTTGTACTCACATGTCTTGGATCTTAAAAACAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGATAGCTATTCTTCTAGGATGGTTAGTGCATTCTAACTTTCTTATATGTTAAAACTGATGTTAGAGTTGAAGGGTAATTTTGAGTTTCCCCATTGTTGCAATTTGACCTCCTTGCCGGCTTCATCATCATGCACGTTTTCCAAAAACATATTATTTGATTGATTGAAATTTCTTCTAGTGTTGGAGGCTGCTGATTGATAACCTGTTATCACTTGTCCTAGTTGGAAATTTATGATGCAGTATGCAGGATAGTTATAAGAAAATTATTGATATCTTCTTAGGATTAAATATATGAGAGTTTTGGGGATTTTGTCTTAGTTTTATGATGGGTCTGTGGGAACCTTCAATTGGATTCTGTTCTTGTACCATTTGCTGGGATTGATGGCAGGATAAAGAAAAAATGAAAGGAAAAACTGTCGAATTGATTATTACCTCATTTAAATTCACCCAGGACTCTGAAGTTGAAACAAACACAAGCCCTGAAATGGAAAATGTTTACTTGAAACTGATTATTTTGTTTTTGTGCCATATGGAAAGGATAAAAAACCTAAGGTAATAAACTAGGACTTGGAAATTCAGTTAGAAATAGAAAGTCAAGTCAAAGATTAGTGATTTGGAGGTCTCTTATTTATTTTGGTCTCCACAAATCAAATCTGAAAATTTAGTATATGGAATGTATTCTTGTACAAAGTTTTCTTTTTGAGTTCATAGATGCCTTATTTGATTATCTGTAAATGAAGACACAATGATTTGAAGCTTTATTTTGTGCAATCATAGCTTTTCACCCTTGAGGCCCCGTTTAATAATAATTTGGTCCTTCAAAATTAAGTTTATGAATTAAGCTTTTAAATGTTATTCCCACCAATGAGTTCCATTATTTTGTTATATACTTCTCCAAATATTTTCAAATCCAAGCCAAATTTTACAAAACTTGATTTTGTTTTTAGAATTTGATCTTTAGAATCTAATTATTTGTTTAAGAGAGATAAAGTCCAATTTTCAAAATCCAAAAACTAAAACTAAAATTATAATCAAATGGGCCCTTGGTTATTTGAATTTCAATTGACGGTTGTTTTCTTTTTTTCCTTTTCTTCAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAACCGAAGGGATTACCTTCTTTCTGACCGC

Coding sequence (CDS)

ATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGA

Protein sequence

MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS

Homology

[Close]

BLAST of Cucsat.G19154.T13 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.0e-07
Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 16  EPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWE 75
           E    S +K   VE +     KS  P     V +S++LA+  G    E+ ++EV+RR+W 
Sbjct: 95  EEKNDSETKGTHVEKKKGTVSKS--PISTRKVTLSKSLASLLG--EHELTRTEVVRRLWA 154

Query: 76  YIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRH 119
           YIK ++L++P N   +LCD KL  + G +S +   + ++L  H
Sbjct: 155 YIKAHNLQNPNNKKEILCDEKLELILG-KSTNMFEMHKILASH 192

[Close]

BLAST of Cucsat.G19154.T13 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-05
Identity = 29/102 (28.43%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 21  SSSKKARVENES----AVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEY 80
           S SK+ + +N+S    ++SV+         V++S  L  F G    E+ +++V++ IW+Y
Sbjct: 102 SKSKRKKKKNDSPDSNSISVR--------KVLLSAPLQKFLG--SEELPRTQVVKMIWQY 161

Query: 81  IKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRH 119
           IK + L++P +   +LCD K+  +FG + ++   + ++L +H
Sbjct: 162 IKEHDLQNPKDRREILCDEKMEPIFG-KKMTMFSMNKLLTKH 192

[Close]

BLAST of Cucsat.G19154.T13 vs. ExPASy Swiss-Prot
Match: Q9P7S3 (SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr3 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 23/69 (33.33%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 49  ISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISA 108
           +S+A AN  G+  RE  + +++  +W+YIK + L+D      + CD  LR+LF  + +  
Sbjct: 208 LSKAFANILGI--REGTRPDIVSYLWQYIKFHRLQDMEEKRLINCDKALRDLFEADRLYF 267

Query: 109 LGIPEVLGR 118
             IPE++ R
Sbjct: 268 PRIPELMNR 274

[Close]

BLAST of Cucsat.G19154.T13 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.8e-05
Identity = 27/96 (28.12%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 16  EPTKPSSSKKARVEN--ESAVSVKSAEPSICP---SVIISEALANFFGVDGREMLQSEVL 75
           E  KP+   + R E+  E     ++ +P+  P    + +S  LA F G++  ++ + + +
Sbjct: 85  EGKKPAKRTRKRKEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGLE--QLSRPQTV 144

Query: 76  RRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESI 107
           +++WEYIK + L+DP +   +LCD KL+ +F  +++
Sbjct: 145 KKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTL 178

[Close]

BLAST of Cucsat.G19154.T13 vs. NCBI nr
Match: XP_004150254.1 (angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015454 [Cucumis sativus])

HSP 1 Score: 246 bits (627), Expect = 7.04e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 219 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 278

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 279 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 338

Query: 121 FRRS 124
           FRRS
Sbjct: 339 FRRS 342

[Close]

BLAST of Cucsat.G19154.T13 vs. NCBI nr
Match: XP_031744592.1 (angiomotin isoform X1 [Cucumis sativus])

HSP 1 Score: 246 bits (627), Expect = 7.26e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 220 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 279

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 280 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 339

Query: 121 FRRS 124
           FRRS
Sbjct: 340 FRRS 343

[Close]

BLAST of Cucsat.G19154.T13 vs. NCBI nr
Match: XP_008447697.1 (PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_008447700.1 PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >KAA0048155.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa] >TYK08100.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (627), Expect = 7.26e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 220 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 279

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 280 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 339

Query: 121 FRRS 124
           FRRS
Sbjct: 340 FRRS 343

[Close]

BLAST of Cucsat.G19154.T13 vs. NCBI nr
Match: XP_038900174.1 (uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida])

HSP 1 Score: 241 bits (615), Expect = 3.63e-77
Identity = 121/124 (97.58%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAV VK AEPSICPSVIISEALANFFGVD
Sbjct: 211 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVGVKGAEPSICPSVIISEALANFFGVD 270

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCD KLRELFGCESISALGIPEVLGRHHI
Sbjct: 271 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDGKLRELFGCESISALGIPEVLGRHHI 330

Query: 121 FRRS 124
           FRRS
Sbjct: 331 FRRS 334

[Close]

BLAST of Cucsat.G19154.T13 vs. NCBI nr
Match: XP_038900172.1 (uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_038900173.1 uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida])

HSP 1 Score: 241 bits (615), Expect = 3.74e-77
Identity = 121/124 (97.58%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAV VK AEPSICPSVIISEALANFFGVD
Sbjct: 212 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVGVKGAEPSICPSVIISEALANFFGVD 271

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCD KLRELFGCESISALGIPEVLGRHHI
Sbjct: 272 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDGKLRELFGCESISALGIPEVLGRHHI 331

Query: 121 FRRS 124
           FRRS
Sbjct: 332 FRRS 335

[Close]

BLAST of Cucsat.G19154.T13 vs. ExPASy TrEMBL
Match: A0A0A0LEG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 3.41e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 219 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 278

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 279 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 338

Query: 121 FRRS 124
           FRRS
Sbjct: 339 FRRS 342

[Close]

BLAST of Cucsat.G19154.T13 vs. ExPASy TrEMBL
Match: A0A1S3BI07 (uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 3.51e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 220 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 279

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 280 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 339

Query: 121 FRRS 124
           FRRS
Sbjct: 340 FRRS 343

[Close]

BLAST of Cucsat.G19154.T13 vs. ExPASy TrEMBL
Match: A0A5D3C9T5 (Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002610 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 3.51e-79
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD
Sbjct: 220 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 279

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI
Sbjct: 280 GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 339

Query: 121 FRRS 124
           FRRS
Sbjct: 340 FRRS 343

[Close]

BLAST of Cucsat.G19154.T13 vs. ExPASy TrEMBL
Match: A0A6J1CGF4 (uncharacterized protein LOC111010586 OS=Momordica charantia OX=3673 GN=LOC111010586 PE=4 SV=1)

HSP 1 Score: 233 bits (593), Expect = 4.24e-74
Identity = 116/124 (93.55%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHIIPLEPTKPSSSKKARVENES + VK AE SICPSVIISEALA FFGVD
Sbjct: 215 MFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAESSICPSVIISEALAKFFGVD 274

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQ+EVLRRIWEYIKVNHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHI
Sbjct: 275 GREMLQTEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHI 334

Query: 121 FRRS 124
           FRRS
Sbjct: 335 FRRS 338

[Close]

BLAST of Cucsat.G19154.T13 vs. ExPASy TrEMBL
Match: A0A6J1J2D3 (uncharacterized protein LOC111480626 OS=Cucurbita maxima OX=3661 GN=LOC111480626 PE=4 SV=1)

HSP 1 Score: 231 bits (590), Expect = 1.20e-73
Identity = 114/124 (91.94%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVD 60
           MFKMNKLLAKHII LEPTKPSSSKKARVENE A++VK+AEPS+CPSVIISEALA+FFGVD
Sbjct: 215 MFKMNKLLAKHIISLEPTKPSSSKKARVENEPAIAVKAAEPSVCPSVIISEALASFFGVD 274

Query: 61  GREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHI 120
           GREMLQSEVLRRIWEYI+ NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHI
Sbjct: 275 GREMLQSEVLRRIWEYIRANHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHI 334

Query: 121 FRRS 124
           FRRS
Sbjct: 335 FRRS 338

The following BLAST results are available for this feature:

BLAST of Cucsat.G19154.T13 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q08747	3.0e-07	33.01	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q05024	1.6e-05	28.43	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
Q9P7S3	2.2e-05	33.33	SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
O74503	4.8e-05	28.13	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]

BLAST of Cucsat.G19154.T13 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150254.1	7.04e-79	100.00	angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015...	[more]
XP_031744592.1	7.26e-79	100.00	angiomotin isoform X1 [Cucumis sativus]	[more]
XP_008447697.1	7.26e-79	100.00	PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_038900174.1	3.63e-77	97.58	uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida]	[more]
XP_038900172.1	3.74e-77	97.58	uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_03890017...	[more]

BLAST of Cucsat.G19154.T13 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEG4	3.41e-79	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1	[more]
A0A1S3BI07	3.51e-79	100.00	uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C9T5	3.51e-79	100.00	Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1CGF4	4.24e-74	93.55	uncharacterized protein LOC111010586 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1J2D3	1.20e-73	91.94	uncharacterized protein LOC111480626 OS=Cucurbita maxima OX=3661 GN=LOC111480626...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 43..124 e-value: 1.6E-9 score: 47.6
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 48..118 e-value: 2.3E-19 score: 69.0
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 42..121 score: 19.366796
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 40..123 e-value: 4.0E-21 score: 76.7
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 42..119
None	No IPR available	PANTHER	PTHR13844:SF62	SUBFAMILY NOT NAMED	coord: 1..120
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 1..120
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 47..118 e-value: 3.31997E-21 score: 78.7393

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G19154	Cucsat.G19154	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19154.T13.E1	Cucsat.G19154.T13.E1	exon
Cucsat.G19154.T13.E2	Cucsat.G19154.T13.E2	exon
Cucsat.G19154.T13.E3	Cucsat.G19154.T13.E3	exon
Cucsat.G19154.T13.E4	Cucsat.G19154.T13.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19154.T13.C1	Cucsat.G19154.T13.C1	CDS
Cucsat.G19154.T13.C2	Cucsat.G19154.T13.C2	CDS
Cucsat.G19154.T13.C3	Cucsat.G19154.T13.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19154.T13	Cucsat.G19154.T13-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus