Cucsat.G19154.T8 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G19154.T8
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	upstream activation factor subunit spp27-like
Location	ctg3517: 36638 .. 39471 (+)
RNA-Seq Expression	Cucsat.G19154.T8
Synteny	Cucsat.G19154.T8

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATATATGTTTCGACTGATAAAAGCTCACCTTTAAAACTTGAAAGCAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGGTTTCTATCTCTTTCTTATTTCGTAGTTGTTTGATTCTCAATTTTAGCACTTTATGAGGTTCATATGATGCATCTGTGTTTGTTTCAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAGTAAGTATTCAGTTTGATGCTTCCCTGTCCCCCTAGTTCTGGAAGAAACCAATAGTTTATTTTCTAATCCTGTCAGAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGTTGGCAAATAAACTCTGGAAACTTTCACTTTGTTGCATGCTAGCCATTCACTATTAATACCATCTTTTCAACTTGAGAGATCATTTCTTTGTAAAAATTATGCATACAGGACCCTCTGTAATGGATCTTAAAACATGGGGCATTGTTCTCATATGTCAGATTAACTGTTTTTTCTTCATTAAAATGATCTTGTACTCACATGTCTTGGATCTTAAAAACAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGATAGCTATTCTTCTAGGATGGTTAGTGCATTCTAACTTTCTTATATGTTAAAACTGATGTTAGAGTTGAAGGGTAATTTTGAGTTTCCCCATTGTTGCAATTTGACCTCCTTGCCGGCTTCATCATCATGCACGTTTTCCAAAAACATATTATTTGATTGATTGAAATTTCTTCTAGTGTTGGAGGCTGCTGATTGATAACCTGTTATCACTTGTCCTAGTTGGAAATTTATGATGCAGTATGCAGGATAGTTATAAGAAAATTATTGATATCTTCTTAGGATTAAATATATGAGAGTTTTGGGGATTTTGTCTTAGTTTTATGATGGGTCTGTGGGAACCTTCAATTGGATTCTGTTCTTGTACCATTTGCTGGGATTGATGGCAGGATAAAGAAAAAATGAAAGGAAAAACTGTCGAATTGATTATTACCTCATTTAAATTCACCCAGGACTCTGAAGTTGAAACAAACACAAGCCCTGAAATGGAAAATGTTTACTTGAAACTGATTATTTTGTTTTTGTGCCATATGGAAAGGATAAAAAACCTAAGGTAATAAACTAGGACTTGGAAATTCAGTTAGAAATAGAAAGTCAAGTCAAAGATTAGTGATTTGGAGGTCTCTTATTTATTTTGGTCTCCACAAATCAAATCTGAAAATTTAGTATATGGAATGTATTCTTGTACAAAGTTTTCTTTTTGAGTTCATAGATGCCTTATTTGATTATCTGTAAATGAAGACACAATGATTTGAAGCTTTATTTTGTGCAATCATAGCTTTTCACCCTTGAGGCCCCGTTTAATAATAATTTGGTCCTTCAAAATTAAGTTTATGAATTAAGCTTTTAAATGTTATTCCCACCAATGAGTTCCATTATTTTGTTATATACTTCTCCAAATATTTTCAAATCCAAGCCAAATTTTACAAAACTTGATTTTGTTTTTAGAATTTGATCTTTAGAATCTAATTATTTGTTTAAGAGAGATAAAGTCCAATTTTCAAAATCCAAAAACTAAAACTAAAATTATAATCAAATGGGCCCTTGGTTATTTGAATTTCAATTGACGGTTGTTTTCTTTTTTTCCTTTTCTTCAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAACCGAAGGGATTACCTTCTTTCTGACCGCTTTTTCCAGCAGTGCCAGCTGTGCTCCATACTTGCTTTACCTTTGGTTGAAGAATTTGTTTCATTTTCTTTTTCTTTTTCAAAAGCATCAAAGAATGGAATAGCCAGGACAAAACTAATGAGTGCTGATCCTTGATTGCAGTTGCAGATCGAATGGTGTTAGCGACTTACATATTGGGACAGTGTTTGGAAAAGTCTATATGGTTTTTTCTCCCCCTTCTCTTAATGTTGTAATCAGTGATGATAATATTTTACTTTTGGATCTTATGCTAAGGTAAGGTGTGAACTTGGGGATGTAAGAATGGGGGCTTATGGCAGAGTTTATTTTGTAATTGTCTGCCAAGTCCTTGGGTTTTCATTTGTCTGACTTGGTGTTTAGGTTTAGAGTAACCCCTGGGAGTTTCTAACATCCATCATACACTACAGATGATGATGGGTAAAGTAAAATTATGTTATCTACTCACTAGTTTGTTAAATATATCTATCTATATATATATATATATATATGTATGATGTTTTTATTTAGTAAAAAGTTTAGCCTTCTTTACTTCCATTTAATCATTTCTTCATATTCTTGGTTACAGTTTATTTGATTCATTTCTTTTCAGTGTTAGTGTTTGGGATACTGTGTTC

Coding sequence (CDS)

AAGATATATGTTTCGACTGATAAAAGCTCACCTTTAAAACTTGAAAGCAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGA

Protein sequence

KIYVSTDKSSPLKLESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS

Homology

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BLAST of Cucsat.G19154.T8 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-13
Identity = 44/123 (35.77%), Postives = 73/123 (59.35%), Query Frame = 0


Query: 13  KLESSTQTKTKRRGGPGGLN---KLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQ 72
           K ES ++ K K+   P   +   +   +S  LQ  +G  ELPRT++VK +W YI++++LQ
Sbjct: 99  KSESKSKRKKKKNDSPDSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQ 158

Query: 73  DPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII-------PLEPTKPSSSKKARVE 126
           +P ++R+I+C++++  +F    T MF MNKLL KH+          E  K +  K+ ++E
Sbjct: 159 NPKDRREILCDEKMEPIFGKKMT-MFSMNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLE 218

[Close]

BLAST of Cucsat.G19154.T8 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-13
Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 21  KTKRRGGPGG--LNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKII 80
           K KR   P    LNK   +SP+L   +G  +L R + VK+LW YI+ ++LQDP++KR I+
Sbjct: 105 KRKRNQDPANNPLNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTIL 164

Query: 81  CNDELRLVFETDCTDMFKMNKLL 102
           C+D+L+ VFE D   MF MNK L
Sbjct: 165 CDDKLKSVFEVDTLHMFTMNKYL 187

[Close]

BLAST of Cucsat.G19154.T8 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.4e-13
Identity = 47/120 (39.17%), Postives = 78/120 (65.00%), Query Frame = 0


Query: 1   KIYVSTDKSSPLKLESSTQ-TKTKRRGG-----PGGLNKLCGVSPELQAIVGQPELPRTE 60
           +I VS   S   K +S T+ T  +++ G     P    K+  +S  L +++G+ EL RTE
Sbjct: 85  EITVSKRSSGEEKNDSETKGTHVEKKKGTVSKSPISTRKVT-LSKSLASLLGEHELTRTE 144

Query: 61  IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 115
           +V++LWAYI+ +NLQ+P+NK++I+C+++L L+     T+MF+M+K+LA H+   EP K S
Sbjct: 145 VVRRLWAYIKAHNLQNPNNKKEILCDEKLELILGKS-TNMFEMHKILASHM--TEPKKIS 200

[Close]

BLAST of Cucsat.G19154.T8 vs. ExPASy Swiss-Prot
Match: Q9P7S3 (SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr3 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.4e-04
Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 44  IVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAK 103
           I+G  E  R +IV  LW YI+ + LQD   KR I C+  LR +FE D     ++ +L+ +
Sbjct: 215 ILGIREGTRPDIVSYLWQYIKFHRLQDMEEKRLINCDKALRDLFEADRLYFPRIPELMNR 274

Query: 104 HIIPLEP 111
            + P++P
Sbjct: 275 FLEPIDP 281

[Close]

BLAST of Cucsat.G19154.T8 vs. ExPASy Swiss-Prot
Match: Q2TBN1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Bos taurus OX=9913 GN=SMARCD1 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.2e-04
Identity = 27/96 (28.12%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 28  PGGLNKLCGV-------------SPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 87
           PG +N  C V              P L  ++G     R  I++ LW YI+ + LQDP  +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334

Query: 88  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEP 111
             +IC+  L+ +FE+      ++ + L   ++P EP
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370

[Close]

BLAST of Cucsat.G19154.T8 vs. NCBI nr
Match: XP_031744592.1 (angiomotin isoform X1 [Cucumis sativus])

HSP 1 Score: 408 bits (1048), Expect = 3.70e-141
Identity = 206/209 (98.56%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 9   SSPLKLESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNL 68
           S P K ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNL
Sbjct: 136 SDPPK-ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNL 195

Query: 69  QDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVS 128
           QDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVS
Sbjct: 196 QDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVS 255

Query: 129 VKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDA 188
           VKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDA
Sbjct: 256 VKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDA 315

Query: 189 KLRELFGCESISALGIPEVLGRHHIFRRS 217
           KLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 316 KLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Cucsat.G19154.T8 vs. NCBI nr
Match: XP_004150254.1 (angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015454 [Cucumis sativus])

HSP 1 Score: 404 bits (1039), Expect = 8.35e-140
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 15  ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 74
           + STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Sbjct: 140 KESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 199

Query: 75  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 134
           RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP
Sbjct: 200 RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 259

Query: 135 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 194
           SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF
Sbjct: 260 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 319

Query: 195 GCESISALGIPEVLGRHHIFRRS 217
           GCESISALGIPEVLGRHHIFRRS
Sbjct: 320 GCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Cucsat.G19154.T8 vs. NCBI nr
Match: XP_008447697.1 (PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_008447700.1 PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >KAA0048155.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa] >TYK08100.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 404 bits (1039), Expect = 8.65e-140
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 15  ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 74
           + STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Sbjct: 141 KESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 200

Query: 75  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 134
           RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP
Sbjct: 201 RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 260

Query: 135 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 194
           SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF
Sbjct: 261 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 320

Query: 195 GCESISALGIPEVLGRHHIFRRS 217
           GCESISALGIPEVLGRHHIFRRS
Sbjct: 321 GCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Cucsat.G19154.T8 vs. NCBI nr
Match: XP_038900172.1 (uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_038900173.1 uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida])

HSP 1 Score: 403 bits (1036), Expect = 1.87e-139
Identity = 203/209 (97.13%), Postives = 203/209 (97.13%), Query Frame = 0


Query: 9   SSPLKLESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNL 68
           S P K ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNL
Sbjct: 128 SDPPK-ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNL 187

Query: 69  QDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVS 128
           QDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAV 
Sbjct: 188 QDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVG 247

Query: 129 VKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDA 188
           VK AEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCD 
Sbjct: 248 VKGAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDG 307

Query: 189 KLRELFGCESISALGIPEVLGRHHIFRRS 217
           KLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 308 KLRELFGCESISALGIPEVLGRHHIFRRS 335

[Close]

BLAST of Cucsat.G19154.T8 vs. NCBI nr
Match: XP_038900174.1 (uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida])

HSP 1 Score: 400 bits (1027), Expect = 4.24e-138
Identity = 198/203 (97.54%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 15  ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 74
           + STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Sbjct: 132 KESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 191

Query: 75  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 134
           RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAV VK AEP
Sbjct: 192 RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVGVKGAEP 251

Query: 135 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 194
           SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCD KLRELF
Sbjct: 252 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDGKLRELF 311

Query: 195 GCESISALGIPEVLGRHHIFRRS 217
           GCESISALGIPEVLGRHHIFRRS
Sbjct: 312 GCESISALGIPEVLGRHHIFRRS 334

[Close]

BLAST of Cucsat.G19154.T8 vs. ExPASy TrEMBL
Match: A0A0A0LEG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1)

HSP 1 Score: 404 bits (1039), Expect = 4.05e-140
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 15  ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 74
           + STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Sbjct: 140 KESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 199

Query: 75  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 134
           RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP
Sbjct: 200 RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 259

Query: 135 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 194
           SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF
Sbjct: 260 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 319

Query: 195 GCESISALGIPEVLGRHHIFRRS 217
           GCESISALGIPEVLGRHHIFRRS
Sbjct: 320 GCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Cucsat.G19154.T8 vs. ExPASy TrEMBL
Match: A0A1S3BI07 (uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=1)

HSP 1 Score: 404 bits (1039), Expect = 4.19e-140
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 15  ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 74
           + STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Sbjct: 141 KESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 200

Query: 75  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 134
           RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP
Sbjct: 201 RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 260

Query: 135 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 194
           SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF
Sbjct: 261 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 320

Query: 195 GCESISALGIPEVLGRHHIFRRS 217
           GCESISALGIPEVLGRHHIFRRS
Sbjct: 321 GCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Cucsat.G19154.T8 vs. ExPASy TrEMBL
Match: A0A5D3C9T5 (Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002610 PE=4 SV=1)

HSP 1 Score: 404 bits (1039), Expect = 4.19e-140
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 15  ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 74
           + STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Sbjct: 141 KESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 200

Query: 75  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 134
           RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP
Sbjct: 201 RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 260

Query: 135 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 194
           SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF
Sbjct: 261 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 320

Query: 195 GCESISALGIPEVLGRHHIFRRS 217
           GCESISALGIPEVLGRHHIFRRS
Sbjct: 321 GCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Cucsat.G19154.T8 vs. ExPASy TrEMBL
Match: A0A6J1CGF4 (uncharacterized protein LOC111010586 OS=Momordica charantia OX=3673 GN=LOC111010586 PE=4 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 5.24e-135
Identity = 193/203 (95.07%), Postives = 197/203 (97.04%), Query Frame = 0


Query: 15  ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 74
           + STQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Sbjct: 136 KESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 195

Query: 75  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 134
           RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENES + VK AE 
Sbjct: 196 RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESGIGVKGAES 255

Query: 135 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 194
           SICPSVIISEALA FFGVDGREMLQ+EVLRRIWEYIKVNHLEDPLNPMAVLCDAKL+ELF
Sbjct: 256 SICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLQELF 315

Query: 195 GCESISALGIPEVLGRHHIFRRS 217
           GCESISALGIPEVLGRHHIFRRS
Sbjct: 316 GCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Cucsat.G19154.T8 vs. ExPASy TrEMBL
Match: A0A6J1J2D3 (uncharacterized protein LOC111480626 OS=Cucurbita maxima OX=3661 GN=LOC111480626 PE=4 SV=1)

HSP 1 Score: 389 bits (998), Expect = 6.09e-134
Identity = 190/203 (93.60%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 15  ESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 74
           + STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Sbjct: 136 KESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK 195

Query: 75  RKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEP 134
           RKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKARVENE A++VK+AEP
Sbjct: 196 RKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENEPAIAVKAAEP 255

Query: 135 SICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELF 194
           S+CPSVIISEALA+FFGVDGREMLQSEVLRRIWEYI+ NHLEDPLNPMAVLCDAKL+ELF
Sbjct: 256 SVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLEDPLNPMAVLCDAKLQELF 315

Query: 195 GCESISALGIPEVLGRHHIFRRS 217
           GCESISALGIPEVLGRHHIFRRS
Sbjct: 316 GCESISALGIPEVLGRHHIFRRS 338

The following BLAST results are available for this feature:

BLAST of Cucsat.G19154.T8 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05024	1.7e-13	35.77	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
O74503	2.9e-13	46.99	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]
Q08747	8.4e-13	39.17	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q9P7S3	2.4e-04	37.31	SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
Q2TBN1	4.2e-04	28.13	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]

BLAST of Cucsat.G19154.T8 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744592.1	3.70e-141	98.56	angiomotin isoform X1 [Cucumis sativus]	[more]
XP_004150254.1	8.35e-140	99.01	angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015...	[more]
XP_008447697.1	8.65e-140	99.01	PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_038900172.1	1.87e-139	97.13	uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_03890017...	[more]
XP_038900174.1	4.24e-138	97.54	uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G19154.T8 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEG4	4.05e-140	99.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1	[more]
A0A1S3BI07	4.19e-140	99.01	uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C9T5	4.19e-140	99.01	Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1CGF4	5.24e-135	95.07	uncharacterized protein LOC111010586 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1J2D3	6.09e-134	93.60	uncharacterized protein LOC111480626 OS=Cucurbita maxima OX=3661 GN=LOC111480626...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 136..217 e-value: 1.6E-9 score: 47.6 coord: 31..110 e-value: 1.2E-44 score: 164.3
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 133..216 e-value: 1.6E-20 score: 74.7 coord: 26..116 e-value: 5.6E-31 score: 108.3
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 23..110
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 135..212
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 141..211 e-value: 8.9E-19 score: 67.1 coord: 35..105 e-value: 5.4E-28 score: 96.7
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 30..107 score: 22.405313
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 135..214 score: 19.366796
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR13844:SF62	SUBFAMILY NOT NAMED	coord: 15..213
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 15..213
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 140..211 e-value: 4.80793E-20 score: 78.3541
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 35..105 e-value: 1.25079E-40 score: 131.512

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G19154	Cucsat.G19154	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19154.T8.E1	Cucsat.G19154.T8.E1	exon
Cucsat.G19154.T8.E2	Cucsat.G19154.T8.E2	exon
Cucsat.G19154.T8.E3	Cucsat.G19154.T8.E3	exon
Cucsat.G19154.T8.E4	Cucsat.G19154.T8.E4	exon
Cucsat.G19154.T8.E5	Cucsat.G19154.T8.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19154.T8.C1	Cucsat.G19154.T8.C1	CDS
Cucsat.G19154.T8.C2	Cucsat.G19154.T8.C2	CDS
Cucsat.G19154.T8.C3	Cucsat.G19154.T8.C3	CDS
Cucsat.G19154.T8.C4	Cucsat.G19154.T8.C4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19154.T8	Cucsat.G19154.T8-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus