MELO3C023181.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023181.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	ras-related protein RABA4d
Location	chr08 : 16185118 .. 16189283 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGCGACCCCACAATGGCCGTTGTTCCATTTCCACTTCTCGCTCTCTTTTCCATCTCTCTTCTTCTTCCTTCATTCTCTTCATTTTCCAGCTTCCAAAATCCACACACTATTCTCTCAAATTTCCCCTTCAAACTCCAGCTCTGATTTCCAATTCCCTTCCCAACTATTTTGCCCACATTTCTCTCTTTACGCTCGATTTTGAGGCATTTGGGCAATTTGGTTTGAGTTGTGATGTTGTTATCCGTCTAATCTGCGTGATTTAGAGGTGGGGTTTGTGGGATTTTTGAGAGAAAGAGAATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCTGCTGTCGGCAAAACACAGCTCCTTGCTCGATTTTCCCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTCATTGATCAGAAAACAGTTAAAGCCCAGATATGGGATACTGCAGGACAAGAAAGGTTTGTGCCCTTCTTTTTTCTTTTGTGGGGTTCATTGGTTTTTTGGACTACTTCATTGTTCAAGGGGTTTGGATCTGTGATAGCTATTGAAATTGGTAAAATCCAAATGAGCTTTTGAGCTTTTGTGGTAATTAATAGGTTGTATATTATGAATGAATGTGTGACACAAGATATAGTTTGACAACAAGGAGTTTGGAATCCTCCAATAGAATCATAACCTGTTTTGTTGTTGTTGTCGTTGTTGCTGTTCAGAGAGAATGCAGATATCCTATTGGTGTTTGAATGCAGTTGTTGTGATCGGAATTGTGTTGGGGTGTTAAGTTTTAACTCAACTTTTCTAATTTTGCCTAGTCTACTCTCAATTGTAGTGTTTGGAATGGAAGGAATGTCAGTAACGGTGAAAAACCAAGCTTTAGGAGGATATCATCTGAAGAAGTGAAACATGGTATTTGAAAATGATGTCTGGTTGAAATTGTTTTTCACTCGTTTTTAAATTTTCCCTAGGTATATTTCCTCCTTGGCTTCTGTTGATGATATTAGGTTTTGCTGTTTTTATCATATTTAACTGCAGCTTTGCTGCAATATTGTGCTGTTTCAGATTAAATGAAATTATTATGATAGGACTAGTATGCAATGTGTTTGTTTTACATATGCTCAGAAGAGAAATGAGAGTGAGTTTCTAGAAGAAAGCTAATGTGAAGGTGAAGGGTGCAAGTTATGTCCGTGGAAATAGTTTGGAGTTTGGTTTACTGTGGCCCATCAATGGAAATGCATATAAAACGGGAGAGAAGTAAAGCATAAATGTAAGATAAAGCAGATGAAAAAAGGGGAGTGAACGACTCTCTATAAAAAAGGGGAAGTGAACGATTGGTGAGGAGTGGACAAAAGCATTCTTGATAAAGGGGAAGGTGATTGTTGAACAATTTAATGAAGGAGAGATTAGTAAGATGGTGAGGAGGAAGACAAGCGCCACCCACAAGAAGTCTAAAGCTGGCTCCTTTTATGGAGCTGTTCCAAATGGATGGATGAATCTTCCAAGAAAAAGGTTATGTCAAGGTTATTCAACAAATGGATGCAAGTTCTAGTAGTCATCAGTAATGCCCAAATTTAAGGGGGAGACATGAATAAATTGAAATCACATCTAAACTAGAGGGATTTTGAGGATATGAAAGATAATTAAGAAAGGCTAAAAAGAATTGAAAGTTCCTACCTATACTAATGAAGTGTACCTTCTCTTCTGGTGACTCATTCATAAGAATTGTAATGTTAAGCATTTTTAGTTTAGAGTAATCTTTTGTTGGGTGACCTACTGGTAATTTTCATAGGAAGCATTTGAGTGAGGACAAAGTATGTTGAAAGAACTTATGTTGGTTTTGGCATAAAGCACTCTTAGAATTAGTAGAATGCTAAAAGAACTCATGTTGGCATATAGGATGGTCTTCACTCGTAGAAGGTGTTCAAGATAGGGATGACTCTGTCTAGTCGCATAGGATGCAAGGGAATGTTGGGATCATCAGGTGTCGAGTTTGGATTCTGAATCTTAGGGCACCTTGTGTAATAGTTGGAAGATGTTGGAAATTCTGACTGATGCTGAGTTGCACTAGTGCAGAAAGTAGGTTATATGTTTCCGGTGTGAGCTATATCGATGGTTGGTGTACAACTTTCTGTCATTGGGGACCAAACTCTAACAAAACGAGTATGCTGCATTCTTTAGATGATATTAAGTTTCAGTTCATCTGGTACCAGAAAATTATGAAGGCAGTGCCAAGTTGGCGACAATGCTGATAAGACATTAATGTTAAGAATAGGGGCATGACATTCTTACTCGAGTCTAAACAATTTTTTATGACATTGCTTCCCCATTCCTCTACTTATAATGAACCCCAGCTATCAAACCCCTAAGCAACAACTGAGGGTGCATTTGGTAAGTGATTTGGAAACAAGATACTCAATGATTAACAAAGTTGTATTTCTATTTTCAATGTTTGTAAATATGCAATTAGTACAAGATTTAGAAACTATATCTCAATTTTAAACGTTGTAGAAAGTGGATTGGGTAACATAGTTATAAATAAAAGAATTAATAGGTCGTAAAATTCGTCTCCTGTATTCTAAGAACGAGATGAAGGATAGAGTAACCATTGAAAAGCTAATCATAAAGAGTGATTTATGAAGGGCATAGCTAGTTAGGAGTTTCGTTATCACTAGATGGGAACATAAATGTATGGGGAGTGAGAAAGGCATAATTTGAGTGAAGGGAAAGGGAAGAGTTGTGGGAAAGCTGAGGGAAGCCGAGGAAAGTTGTGGACCTCTCTAAAGTTTTGCCACCTTAAATACTTTTGTTTTGCATGAAGAAACTGCGGTAAAATGATGATCCATTTCTCAACTCTTTCTGGCTTTGATACATATAATTAAATCCCTTCAGTCAGATTTGAGAACGACAAGTTATGATATCTTGAATCCCATCAATAATCTGTATTCATTACTTTTTTGTCTGACTTATCCACAATCGATGTAACATTGATGAAATCTTTGCATTATCACTCAAACAAAATATTCTATGTTTTAAGTTTATCTACTCTTAAATTCATAATTAAACAGCCTCGTTGTTGTATAATTGTCTAACATGAAACAAGTTTGACATTTAAAATGCTAGGAGCCTGTGCCCTGTGGTATCAACGAGCTAGGATTTGTATTATATTGTAATATTTTCCATTTGGTTGCTGATAAACCAACTTATGAGTTGCTGATATCAAAATTGACTTGTGAATATTCTGTTTTACATACGTCATTTGGTGTTTGTGGCTGCTATTACGCTCAAAAAGTTCTCGTTTTGACTTGGTCAGGTTCTTTGTTTGGATTGTTATTTGATCGAACATCGTATCTGATGAAATAGCATACGTAAATTTGACATTTTTATGTAAAACATTTTTTGTGAGCATTGCTGTTAATTACTTTTGTTTTGCATGAAGAACATCGTATCTGATGAAATAACATTTTTTGTGAGCATTGCTGTTAATTTGACTATAGTTTCTAAAACTATGCCCTTTTCCGCATTGCCAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCGTTCGACCACATGGCAAGGTGGCTGGAGGAACTAAGAGGGCATGCTGATAAGAACATCGTTATAATGCTCATCGGAAACAAATGCGATTTAGGAAGTCTCCGAGCGGTGCCAACAGAAGATGCACAAGAGTTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACTTCGGCTCTGGAGTCGACGAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGCCCTGTTTAAAGGGACTAATATAGTTGTGCCTGGACAAGACCAGGATTCTGGGACAAAAGGTTGTTGCTTTGCGTCATGAATTTCACATAATTCCATAATCATTTCAGTTGTGACATTGTTTTTTAATTCCAATTGGATTTATGCTAAGAAAAAAATTCATGTATTAGTTATTTGTAGAGTGACTGGCTTGATACCATGGATGAAGGATTAG

mRNA sequence

GGTGCGACCCCACAATGGCCGTTGTTCCATTTCCACTTCTCGCTCTCTTTTCCATCTCTCTTCTTCTTCCTTCATTCTCTTCATTTTCCAGCTTCCAAAATCCACACACTATTCTCTCAAATTTCCCCTTCAAACTCCAGCTCTGATTTCCAATTCCCTTCCCAACTATTTTGCCCACATTTCTCTCTTTACGCTCGATTTTGAGGCATTTGGGCAATTTGGTTTGAGTTGTGATGTTGTTATCCGTCTAATCTGCGTGATTTAGAGGTGGGGTTTGTGGGATTTTTGAGAGAAAGAGAATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCTGCTGTCGGCAAAACACAGCTCCTTGCTCGATTTTCCCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTCATTGATCAGAAAACAGTTAAAGCCCAGATATGGGATACTGCAGGACAAGAAAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCGTTCGACCACATGGCAAGGTGGCTGGAGGAACTAAGAGGGCATGCTGATAAGAACATCGTTATAATGCTCATCGGAAACAAATGCGATTTAGGAAGTCTCCGAGCGGTGCCAACAGAAGATGCACAAGAGTTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACTTCGGCTCTGGAGTCGACGAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGCCCTAGTGACTGGCTTGATACCATGGATGAAGGATTAG

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCTGCTGTCGGCAAAACACAGCTCCTTGCTCGATTTTCCCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTCATTGATCAGAAAACAGTTAAAGCCCAGATATGGGATACTGCAGGACAAGAAAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCGTTCGACCACATGGCAAGGTGGCTGGAGGAACTAAGAGGGCATGCTGATAAGAACATCGTTATAATGCTCATCGGAAACAAATGCGATTTAGGAAGTCTCCGAGCGGTGCCAACAGAAGATGCACAAGAGTTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACTTCGGCTCTGGAGTCGACGAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGCCCTAGTGACTGGCTTGATACCATGGATGAAGGATTAG

Protein sequence

MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPALVTGLIPWMKD

Homology

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BLAST of MELO3C023181.2 vs. NCBI nr
Match: XP_004150166.1 (PREDICTED: ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical protein Csa_4G152280 [Cucumis sativus])

HSP 1 Score: 392.9 bits (1008), Expect = 6.8e-106
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKKSLAAGEEIDIGSNPAL  G
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKG 202

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BLAST of MELO3C023181.2 vs. NCBI nr
Match: XP_008460801.1 (PREDICTED: ras-related protein RABA4d [Cucumis melo])

HSP 1 Score: 392.9 bits (1008), Expect = 6.8e-106
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKKSLAAGEEIDIGSNPAL  G
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKG 202

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BLAST of MELO3C023181.2 vs. NCBI nr
Match: XP_022925137.1 (ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related protein RABA4d [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385.2 bits (988), Expect = 1.4e-103
Identity = 196/202 (97.03%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKKSLAAGE IDIG NPAL  G
Sbjct: 181 SKKSLAAGESIDIGVNPALFKG 202

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BLAST of MELO3C023181.2 vs. NCBI nr
Match: XP_022966454.1 (ras-related protein RABA4d [Cucurbita maxima])

HSP 1 Score: 385.2 bits (988), Expect = 1.4e-103
Identity = 196/202 (97.03%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKKSLAAGE IDIG NPAL  G
Sbjct: 181 SKKSLAAGESIDIGVNPALFKG 202

[Close]

BLAST of MELO3C023181.2 vs. NCBI nr
Match: XP_022151622.1 (ras-related protein RABA4d-like [Momordica charantia])

HSP 1 Score: 379.0 bits (972), Expect = 1.0e-101
Identity = 192/194 (98.97%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIG 195
           SKK+LAAGEEIDIG
Sbjct: 181 SKKTLAAGEEIDIG 194

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BLAST of MELO3C023181.2 vs. TAIR10
Match: AT3G12160.1 (RAB GTPase homolog A4D)

HSP 1 Score: 361.7 bits (927), Expect = 3.1e-100
Identity = 184/202 (91.09%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKKSL A ++ D   N +L+ G
Sbjct: 181 SKKSLTADDD-DADGNSSLLKG 201

[Close]

BLAST of MELO3C023181.2 vs. TAIR10
Match: AT5G47960.1 (RAB GTPase homolog A4C)

HSP 1 Score: 332.0 bits (850), Expect = 2.6e-91
Identity = 164/202 (81.19%), Postives = 186/202 (92.08%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKK+L A EE + G + +L+ G
Sbjct: 181 SKKNLVANEEGESGGDSSLLQG 202

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BLAST of MELO3C023181.2 vs. TAIR10
Match: AT5G65270.1 (RAB GTPase homolog A4A)

HSP 1 Score: 304.3 bits (778), Expect = 5.8e-83
Identity = 151/198 (76.26%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD +QKIDYVFKVVLIGDSAVGK+Q+LAR++R+EFS+DSKATIGVEFQT+TLVID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DL   RA+PTEDA+EFAE+E LFF+ETSA  +TNVE+AF T+LTEI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186

Query: 185 LAAGEEIDIGSNPALVTG 203
           LAA E+ + G NP  + G
Sbjct: 187 LAASEDQENG-NPGSLAG 203

[Close]

BLAST of MELO3C023181.2 vs. TAIR10
Match: AT4G39990.1 (RAB GTPase homolog A4B)

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-78
Identity = 146/204 (71.57%), Postives = 176/204 (86.27%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG  + K+DYVFKVVLIGDSAVGK+QLLARF+R+EFS+DSKATIGVEFQT+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DL   RAVPTEDA+EFAE+E LFF+ETSAL +TNVE +F T++T+IY  ++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186

Query: 185 LAAGEEIDIGSNPALVTG---LIP 206
           LA+  +    +NP  + G   LIP
Sbjct: 187 LASEGD---SNNPGSLAGKKILIP 207

[Close]

BLAST of MELO3C023181.2 vs. TAIR10
Match: AT5G59150.1 (RAB GTPase homolog A2D)

HSP 1 Score: 259.2 bits (661), Expect = 2.1e-69
Identity = 128/180 (71.11%), Postives = 151/180 (83.89%), Query Frame = 0


Query: 10  QKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIW 69
           Q  DY+FK+VLIGDS VGKT +L+RF+RNEF ++SK+TIGVEF T+TL ++ KTVKAQIW
Sbjct: 7   QDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66

Query: 70  DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNK 129
           DTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GNK
Sbjct: 67  DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNK 126

Query: 130 CDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGE 189
            DL  LR+V  ED Q  AE E L F+ETSALE+TNVE AF T+L EIY IISKK+LAA E
Sbjct: 127 ADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQE 186

[Close]

BLAST of MELO3C023181.2 vs. Swiss-Prot
Match: sp|Q9LH50|RAA4D_ARATH (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 5.5e-99
Identity = 184/202 (91.09%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKKSL A ++ D   N +L+ G
Sbjct: 181 SKKSLTADDD-DADGNSSLLKG 201

[Close]

BLAST of MELO3C023181.2 vs. Swiss-Prot
Match: sp|P25766|RLGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 334.7 bits (857), Expect = 7.2e-91
Identity = 166/198 (83.84%), Postives = 183/198 (92.42%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG+  QKIDYVFKVVLIGDSAVGK+QLLARF+RNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIM
Sbjct: 68  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DLG+LR VPTEDA+EFAERENLFFMETSALESTNVE AF T+LTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187

Query: 185 LAAGEEIDIGSNPALVTG 203
           L A EE+D   N +L+ G
Sbjct: 188 LVANEEVDSSGNSSLLKG 205

[Close]

BLAST of MELO3C023181.2 vs. Swiss-Prot
Match: sp|Q9FE79|RAA4C_ARATH (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 4.7e-90
Identity = 164/202 (81.19%), Postives = 186/202 (92.08%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKK+L A EE + G + +L+ G
Sbjct: 181 SKKNLVANEEGESGGDSSLLQG 202

[Close]

BLAST of MELO3C023181.2 vs. Swiss-Prot
Match: sp|Q40191|RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.3e-84
Identity = 156/195 (80.00%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD N KIDYVFKVVLIGDSAVGK+Q+LARF+RNEFS+DSK+TIGVEFQT+TLVID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNKCDL + R VPTEDA+EFAE+E LFF+ETSALE+TNVE+AF T+LTEIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186

Query: 185 LAAGEEIDIGSNPAL 200
           LAA E    G++ +L
Sbjct: 187 LAADESQGNGNSASL 201

[Close]

BLAST of MELO3C023181.2 vs. Swiss-Prot
Match: sp|Q40520|RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 9.5e-83
Identity = 154/202 (76.24%), Postives = 180/202 (89.11%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           M++ YGD +QKIDYVFKVVLIGDSAVGKTQ+LARF+RNEFS+DSKATIGVEFQT+TLVI 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIML GNK DL   RAVPTEDA+EFA++E LFF+ETSA+E+T +E AF T+LTEI+ I+
Sbjct: 121 IVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIV 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           +KK+LAA +E    SNPA +TG
Sbjct: 181 NKKNLAA-DENQSNSNPASLTG 201

[Close]

BLAST of MELO3C023181.2 vs. TrEMBL
Match: tr|A0A1S3CDP9|A0A1S3CDP9_CUCME (ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.5e-106
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKKSLAAGEEIDIGSNPAL  G
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKG 202

[Close]

BLAST of MELO3C023181.2 vs. TrEMBL
Match: tr|A0A0A0KW90|A0A0A0KW90_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.5e-106
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKKSLAAGEEIDIGSNPAL  G
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKG 202

[Close]

BLAST of MELO3C023181.2 vs. TrEMBL
Match: tr|A0A2P5CAT0|A0A2P5CAT0_PARAD (Small GTP-binding domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_169010 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.2e-98
Identity = 183/202 (90.59%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDY+QKIDYVFKVVLIGDSAVGKTQLLARF+RNEFS+DSKATIGVEFQTKTL+ID
Sbjct: 1   MSNLYGDYSQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSIDSKATIGVEFQTKTLIID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRA+PTEDAQEFA+RENLFFMETSALESTNVETAFFTILTEIY II
Sbjct: 121 IVIMLIGNKCDLGSLRAIPTEDAQEFAQRENLFFMETSALESTNVETAFFTILTEIYGII 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKK+L A +E+D   N  L+ G
Sbjct: 181 SKKTLTASDEVDSSGNSGLLKG 202

[Close]

BLAST of MELO3C023181.2 vs. TrEMBL
Match: tr|A0A061EWF7|A0A061EWF7_THECC (RAB GTPase A4D OS=Theobroma cacao OX=3641 GN=TCM_024843 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 7.7e-98
Identity = 183/202 (90.59%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSN YGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNFYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLAID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALESTNVETAF T+LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKK+LAA +E+D   N  L+ G
Sbjct: 181 SKKTLAANDELDPNGNSGLLKG 202

[Close]

BLAST of MELO3C023181.2 vs. TrEMBL
Match: tr|A0A0D2NSL7|A0A0D2NSL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G140300 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.7e-97
Identity = 181/202 (89.60%), Postives = 194/202 (96.04%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQ+IDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQRIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVK+QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD+MARWLEELRGHAD+N
Sbjct: 61  NKTVKSQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMARWLEELRGHADQN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           +VIML+GNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALESTNVETAFFT+LTEIYRII
Sbjct: 121 LVIMLVGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALESTNVETAFFTVLTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALVTG 203
           SKK+L A EE+D   N AL+ G
Sbjct: 181 SKKTLTANEELDPNGNAALLKG 202

The following BLAST results are available for this feature:

BLAST of MELO3C023181.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150166.1	6.8e-106	99.01	PREDICTED: ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical...	[more]
XP_008460801.1	6.8e-106	99.01	PREDICTED: ras-related protein RABA4d [Cucumis melo]	[more]
XP_022925137.1	1.4e-103	97.03	ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related prot...	[more]
XP_022966454.1	1.4e-103	97.03	ras-related protein RABA4d [Cucurbita maxima]	[more]
XP_022151622.1	1.0e-101	98.97	ras-related protein RABA4d-like [Momordica charantia]	[more]

BLAST of MELO3C023181.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12160.1	3.1e-100	91.09	RAB GTPase homolog A4D	[more]
AT5G47960.1	2.6e-91	81.19	RAB GTPase homolog A4C	[more]
AT5G65270.1	5.8e-83	76.26	RAB GTPase homolog A4A	[more]
AT4G39990.1	1.1e-78	71.57	RAB GTPase homolog A4B	[more]
AT5G59150.1	2.1e-69	71.11	RAB GTPase homolog A2D	[more]

BLAST of MELO3C023181.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LH50\|RAA4D_ARATH	5.5e-99	91.09	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
sp\|P25766\|RLGP1_ORYSJ	7.2e-91	83.84	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
sp\|Q9FE79\|RAA4C_ARATH	4.7e-90	81.19	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
sp\|Q40191\|RB11A_LOTJA	1.3e-84	80.00	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
sp\|Q40520\|RB11C_TOBAC	9.5e-83	76.24	Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1	[more]

BLAST of MELO3C023181.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CDP9\|A0A1S3CDP9_CUCME	4.5e-106	99.01	ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1	[more]
tr\|A0A0A0KW90\|A0A0A0KW90_CUCSA	4.5e-106	99.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1	[more]
tr\|A0A2P5CAT0\|A0A2P5CAT0_PARAD	1.2e-98	90.59	Small GTP-binding domain containing protein OS=Parasponia andersonii OX=3476 GN=...	[more]
tr\|A0A061EWF7\|A0A061EWF7_THECC	7.7e-98	90.59	RAB GTPase A4D OS=Theobroma cacao OX=3641 GN=TCM_024843 PE=4 SV=1	[more]
tr\|A0A0D2NSL7\|A0A0D2NSL7_GOSRA	1.7e-97	89.60	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G140300 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009827	plant-type cell wall modification
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0080092	regulation of pollen tube growth
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0045177	apical part of cell
cellular_component	GO:0070382	exocytic vesicle
cellular_component	GO:0016020	membrane
cellular_component	GO:0090404	pollen tube tip
cellular_component	GO:0005768	endosome
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019900	kinase binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023181.2.1	MELO3C023181.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 57..79 score: 53.74 coord: 16..37 score: 50.9 coord: 119..132 score: 52.08 coord: 39..55 score: 34.43 coord: 154..176 score: 43.15
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 e-value: 3.5E-26 score: 103.0
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..207 e-value: 5.1E-5 score: 22.2
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.0015 score: 5.3
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 18..175 e-value: 2.6E-11 score: 25.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 e-value: 1.7E-105 score: 366.5
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 13..194 e-value: 1.2E-66 score: 225.7
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 2..202
None	No IPR available	PANTHER	PTHR24073:SF863	RAS-RELATED PROTEIN RABA4D	coord: 2..202
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..209 score: 35.459
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..177 e-value: 9.33747E-123 score: 346.47
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 17..177 e-value: 1.7E-61 score: 206.4
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..171 e-value: 1.6E-36 score: 123.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..182

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C023181.2	Csa4G152280	Cucumber (Chinese Long) v2	cumedB313
MELO3C023181.2	CSPI04G10370	Wild cucumber (PI 183967)	cpimedB315
MELO3C023181.2	Cucsa.038020	Cucumber (Gy14) v1	cgymedB013
MELO3C023181.2	CmaCh03G000800	Cucurbita maxima (Rimu)	cmamedB708
MELO3C023181.2	CmaCh07G013160	Cucurbita maxima (Rimu)	cmamedB911
MELO3C023181.2	CmoCh07G013610	Cucurbita moschata (Rifu)	cmomedB899
MELO3C023181.2	CmoCh03G000810	Cucurbita moschata (Rifu)	cmomedB699
MELO3C023181.2	Lsi01G018930	Bottle gourd (USVL1VR-Ls)	lsimedB166
MELO3C023181.2	Cp4.1LG19g00520	Cucurbita pepo (Zucchini)	cpemedB536
MELO3C023181.2	Cp4.1LG10g11790	Cucurbita pepo (Zucchini)	cpemedB085
MELO3C023181.2	CsGy4G010060	Cucumber (Gy14) v2	cgybmedB281
MELO3C023181.2	ClCG04G000360	Watermelon (Charleston Gray)	medwcgB530
MELO3C023181.2	Cla97C04G068730	Watermelon (97103) v2	medwmbB535
MELO3C023181.2	Bhi03G002125	Wax gourd	medwgoB649
MELO3C023181.2	Carg22467	Silver-seed gourd	carmedB0200
MELO3C023181.2	CsaV3_4G010530	Cucumber (Chinese Long) v3	cucmedB322

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None