CmaCh07G013160 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G013160
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RAC-like GTP binding protein 5
Location	Cma_Chr07 : 7439253 .. 7443271 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTGATTGATTGATTGATTGATTGATTGATTGATCGATTCTTCTGCTTCGTGGTTTGATTTTGGGGTTTCCCAGTTGTTATGATCGGGAAATGGGAAATTTCTTTGAGTTATAGGGCTTCTATGTGTCTAATCTGCGTGTTTTAGAGGTGGGTTTGTGGGGAATTTTGAAGAGAAAATTAGAATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGGTATGTTGGTTTAATTCTTCTTGTTTTGTTTCTTGTGGAGTACTTCATTGTGTTCATGCTTTTGGATCTGTGATAGCTTTTAGAGATGAAAATTGGAATGTGCTCTTCAACTTTGTTGTAACTTATAGCTTAGAGTAGATGAATCATTGTATGATATAGCATGGAATTTGTAATAGCCCAAGCCCATCGCTAAGAGAATGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCGTAGTTAAAGCCTTGAGGGGAAGTCTGAAAGGGGAAGTTTAAAGAGGACAATATCTACTTACGGTGGGCTTGGGCTGTTACAAATTGTATCAGAGCCAGACACCGAGCAGTGTGCCCAACGAGGACGTTGGGTCCCCAAAGGGGTAGATTGTAAGATCCCACGTCGAATAGAGAGGAGAACCACACATTCCTTATAAGGGTGTGGAAACTTCTCCCGAGCAGATGCGTTTTAAAACCTTGAGGGGAAGTCCAAAAGGGAAATCGCAAAAAGGGAAATATCTGTTAGCGGTGGGTTTGGGGTTCCCACGCTCTTATAAAGAATGTTTCGTTCTCCTCTTCAACCAATGTGGGGTCTTACAATATGAGGATAATATCTGGATGAGTACCAATTTCGTTGCATAACTCTAAAATACGCGTTTTAAAACCTTGAGGAGAAGTCCAAATAATACAATATCTGCTAGCGGCAGGCTTGGGCTAATACAAATGATATCAAAGTCAGACACCAAACGGTGTGCTAGCAAGAACGTTGGGCCTCCAAGGGGGGTGGATTGTGAGACCCCACATCGGTCGGAGAGGATAACGAAACATTCCTTATAAGGGTGTGAAAACCTCTTCCTAGTAGACATGTTTTAAAGCCTTGAGGGGAAGTCCGGAAGGGAAAGTCGAAAAGATGACAACATCTGCTAGCGGTAGCTTGGGCTGTTATAGAATTAGACGGCATAGATAGCAAAGAGTTCGGAAGCGTTTAATAGAATTGAAACTTGTTTTGTTATTGTTTTCTCTGTACTCTCAAATCCAGAGAGATTGGAGAGATACATTTATGTTTGAATGAACTTGTGGTGATTGGAATAGTGTTCATGTTCCTTTTTATTCTTTCGGAGATTGCAGAAGTTATTTTTCTCTTCATTTTATGTTTTTCTGTTTTTTTATTATATGTAGCTGCAGTGCATTCTTGTCCTGTTTTAGATTTATTGAAATTGTTGTAATAAGATCGATAAGTCATAGGTTTGGTTTATGTATGCTTGGAAAAGACATAATGAAAGAATGAGTTGTTGGGAGAAAAATGAGAAGGGTTTGATCTATGTGGGACTCGAGTAGTTCGGCACAGTGAGGCCCGACTTTCGTGATTCTCTTGTTGTAGGGTCGGAATGCAAACACAAGAGGACTCGGTTCTGCATAAATTCGAGAGGAAGGTAGGGGAGAGTGATGGAAAAGGTGAGTGAAGTCGGGGGGGAGTCGGATACCTTTCTCGAGTTTGCTAACTTTTGTTATCAAAAGTGTATTTCAAGTTAGGGAAATTCTATCAAATTGCTATTAGAGAACTTTCTTAGGCATACCTAAGAGTCAAGTGGAATGAGAACTAGTAGATATTGCTCTCTTTGAGCTTTCCCTTTTGGGCTTTCCCTCAAGGGAGAGGTTTCCATACCCTTATAAAGAATGTTTTGTTCTCCTCTTCAATCGATATGAGATCTTTCAATCCACCCTCTTTGGGGCCCAACATCCTTGCTAGCACACCGCCTGGTGTCCACCCCCTTCGGAGTTCAGCCTCCTAGCTGGCACATCACCTGGTGTCTAGCTCTGATATAATTTGTAACGGCTCAAGTCCACTTCTATCAGATATTGTCCTCTTTGAGTTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGCATCTGCAAGGGAGAGATTTCCACACCCTTATAGAAAATGTTTCGTTCCTCTCTCCAATCGATGTGGGATCCTATAACCCCCCCTAGGCCCAACATCCTCACTGGCACTCATTCCCCTCTTCAATCGATGTGGGACCCCCCAATCCACCCTCATTTAGGGCTTAGCGTCTTGGCTGGCACACCGCCTGGTGTCGATCCCCCTTCGGAGTTCAGCATCATCCATCGAATGTCTGACTCTGATATCATTTGTAACCGCCCAAGCCCACTGCTAGCAAATATTGTCCCTTTTGGGCTTTTCTTTTCGAGTTTCCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCCCGTCTCCAATTGATGTGGGATCTCACACTTGAAGTGCCTAAGTAACGGAAAGGACATTATCATTTGGATTAACCAATGAATAAGTTGCTGAAGCAAAGGGAGGAGGAATGAATTGTGACGAGGGACAAGACAGTTGAATTAAGGAGAGGGAGAGGCTAGTGAGATAATGAGGAGGAAGTCAGGCATAAATGAACTAACCACAAGAAGGCTAGAGCTGCCTCAATTGAATGGAGTCAATCCGAATGGATGGACGAGTCGTCAATCTCTTTGCACTCGGTGAAGTTCAAGCTGGCGAAGATAGCTCGATTTCCTACGACATCACATGAAGGAACGCCATATGAGCTTTTCTTAGCTCTACAACAGGAGAGTAGTGTGTACTAACTCAATGGATTGGCAGAGCAATGGTGGACGCCCCATCGAAAAGGTGGAGGTTTGGATGGGGTCATGATGAATAAACGAGCCACGAGTTCGGTTTATGTATTCGAGGAAGAAAACGAGAGAATTGGGTTAACTTGAATGCTAACCAGAAGGGTGTGAGTTATGCAGGACTCAAATTAGTTAGGAGGAGTGAGGTGCGTCATTTATAATTCCGATATCATCAGACGTGAGAGATGTCGAAGGAGAACGTTATGGAATAGTTGAGGAGAGTTCGATACGTATATCTGACGAAATAAGACTCTGAAAATCGATGTTATAAACTTAAATTGTGTAGGTTACGATGAATTTGTTCATAGTTTCTTATGATATCTTGTTATCTCCATTGTTAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACAAAGCGTCAATCGTTCGACCACATGGCACGGTGGCTGGAGGAGCTACGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTGGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGAGCAGGCTGGTGGGAGAAAAGGGTGTTGCTTTGCCTCATGAGTTTCCATATAATTCCATCATCATTTCAGTTGGGACATTGTTTTTCTATTCCACTTTTGATTTATACTAAGAAAAAAAAGATTCATGTATTTGTATTTTGTAGAGGAACTGGC

mRNA sequence

GGTTGATTGATTGATTGATTGATTGATTGATTGATCGATTCTTCTGCTTCGTGGTTTGATTTTGGGGTTTCCCAGTTGTTATGATCGGGAAATGGGAAATTTCTTTGAGTTATAGGGCTTCTATGTGTCTAATCTGCGTGTTTTAGAGGTGGGTTTGTGGGGAATTTTGAAGAGAAAATTAGAATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACAAAGCGTCAATCGTTCGACCACATGGCACGGTGGCTGGAGGAGCTACGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTGGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGAGCAGGCTGGTGGGAGAAAAGGGTGTTGCTTTGCCTCATGAGTTTCCATATAATTCCATCATCATTTCAGTTGGGACATTGTTTTTCTATTCCACTTTTGATTTATACTAAGAAAAAAAAGATTCATGTATTTGTATTTTGTAGAGGAACTGGC

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACAAAGCGTCAATCGTTCGACCACATGGCACGGTGGCTGGAGGAGCTACGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTGGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGAGCAGGCTGGTGGGAGAAAAGGGTGTTGCTTTGCCTCATGA

Protein sequence

MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS

Homology

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BLAST of CmaCh07G013160 vs. Swiss-Prot
Match: RAA4D_ARATH (Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 5.4e-105
Identity = 191/220 (86.82%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P ++++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

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BLAST of CmaCh07G013160 vs. Swiss-Prot
Match: RLGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2)

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-95
Identity = 176/219 (80.37%), Postives = 193/219 (88.13%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG+  QKIDYVFKVVLIGDSAVGK+QLL+RF+RNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIM
Sbjct: 68  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DLG+LR VPTEDA+EFAERENLFFMETSALESTNVE AF  +LTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187

Query: 185 LAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           L A E +D   N +L KGT IVVPGQE A   K  C  S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

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BLAST of CmaCh07G013160 vs. Swiss-Prot
Match: RAA4C_ARATH (Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.9e-94
Identity = 172/223 (77.13%), Postives = 196/223 (87.89%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLL+RFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F  +LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           SKK+L A E  + G + +L +GT IVV G+E     KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

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BLAST of CmaCh07G013160 vs. Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.6e-88
Identity = 167/221 (75.57%), Postives = 189/221 (85.52%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD N KIDYVFKVVLIGDSAVGK+Q+L+RF+RNEFS+DSK+TIGVEFQT+TLVID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNKCDL + R VPTEDA+EFAE+E LFF+ETSALE+TNVE+AF  +LTEIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186

Query: 185 LAAGESIDIGVNPALFKGTNIVVPG--QEQAGGRKGCCFAS 224
           LAA ES   G N A   G  I++PG  QE    R  CC AS
Sbjct: 187 LAADESQGNG-NSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226

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BLAST of CmaCh07G013160 vs. Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.7e-85
Identity = 159/221 (71.95%), Postives = 187/221 (84.62%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           M++ YGD +QKIDYVFKVVLIGDSAVGKTQ+L+RF+RNEFS+DSKATIGVEFQT+TLVI 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIML GNK DL   RAVPTEDA+EFA++E LFF+ETSA+E+T +E AF  +LTEI+ I+
Sbjct: 121 IVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQA-GGRKGCC 221
           +KK+LAA E+     NPA   G  I+VPG  Q   G+K CC
Sbjct: 181 NKKNLAADEN-QSNSNPASLTGKKILVPGPGQVIPGKKACC 220

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BLAST of CmaCh07G013160 vs. TrEMBL
Match: A0A0A0KW90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152280 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.3e-116
Identity = 215/223 (96.41%), Postives = 218/223 (97.76%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGT+IVVPGQ+Q  GRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

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BLAST of CmaCh07G013160 vs. TrEMBL
Match: V4S363_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005824mg PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.1e-103
Identity = 191/224 (85.27%), Postives = 206/224 (91.96%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLL+RF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  +LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQ-AGGRKGCCFAS 224
           SKKSL A +  D+  N  L KGT I+VPGQ+Q +  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

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BLAST of CmaCh07G013160 vs. TrEMBL
Match: A0A067F1B3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027382mg PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.1e-103
Identity = 191/224 (85.27%), Postives = 206/224 (91.96%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLL+RF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  +LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQ-AGGRKGCCFAS 224
           SKKSL A +  D+  N  L KGT I+VPGQ+Q +  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

[Close]

BLAST of CmaCh07G013160 vs. TrEMBL
Match: M4FC85_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.7e-103
Identity = 192/220 (87.27%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P +E++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEEESGKRGGCC 219

[Close]

BLAST of CmaCh07G013160 vs. TrEMBL
Match: A0A078IRM3_BRANA (BnaA01g30820D protein OS=Brassica napus GN=BnaCnng23010D PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.7e-103
Identity = 192/220 (87.27%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P +E++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEEESGKRGGCC 219

[Close]

BLAST of CmaCh07G013160 vs. TAIR10
Match: AT3G12160.1 (AT3G12160.1 RAB GTPase homolog A4D)

HSP 1 Score: 381.7 bits (979), Expect = 3.1e-106
Identity = 191/220 (86.82%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P ++++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of CmaCh07G013160 vs. TAIR10
Match: AT5G47960.1 (AT5G47960.1 RAB GTPase homolog A4C)

HSP 1 Score: 346.7 bits (888), Expect = 1.1e-95
Identity = 172/223 (77.13%), Postives = 196/223 (87.89%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLL+RFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F  +LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           SKK+L A E  + G + +L +GT IVV G+E     KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

[Close]

BLAST of CmaCh07G013160 vs. TAIR10
Match: AT5G65270.1 (AT5G65270.1 RAB GTPase homolog A4A)

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-83
Identity = 157/219 (71.69%), Postives = 184/219 (84.02%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD +QKIDYVFKVVLIGDSAVGK+Q+L+R++R+EFS+DSKATIGVEFQT+TLVID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DL   RA+PTEDA+EFAE+E LFF+ETSA  +TNVE+AF  +LTEI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186

Query: 185 LAAGESIDIGVNPALFKGTNI-VVPGQEQAGGRKG--CC 221
           LAA E  + G NP    G  I +VPG  Q    K   CC
Sbjct: 187 LAASEDQENG-NPGSLAGKKIDIVPGPGQVIPNKSNMCC 224

[Close]

BLAST of CmaCh07G013160 vs. TAIR10
Match: AT4G39990.1 (AT4G39990.1 RAB GTPase homolog A4B)

HSP 1 Score: 295.8 bits (756), Expect = 2.2e-80
Identity = 151/222 (68.02%), Postives = 183/222 (82.43%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG  + K+DYVFKVVLIGDSAVGK+QLL+RF+R+EFS+DSKATIGVEFQT+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DL   RAVPTEDA+EFAE+E LFF+ETSAL +TNVE +F  ++T+IY  ++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186

Query: 185 LAA-GESIDIGVNPALFKGTNIVVP--GQEQAGGRKGCCFAS 224
           LA+ G+S     NP    G  I++P  GQE       CC +S
Sbjct: 187 LASEGDS----NNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of CmaCh07G013160 vs. TAIR10
Match: AT5G59150.1 (AT5G59150.1 RAB GTPase homolog A2D)

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-71
Identity = 139/212 (65.57%), Postives = 166/212 (78.30%), Query Frame = 1


Query: 10  QKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIW 69
           Q  DY+FK+VLIGDS VGKT +LSRF+RNEF ++SK+TIGVEF T+TL ++ KTVKAQIW
Sbjct: 7   QDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66

Query: 70  DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNK 129
           DTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GNK
Sbjct: 67  DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNK 126

Query: 130 CDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKSLAAGE 189
            DL  LR+V  ED Q  AE E L F+ETSALE+TNVE AF  +L EIY IISKK+LAA E
Sbjct: 127 ADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQE 186

Query: 190 SIDIGVNPAL-FKGTNIVVPGQEQAGGRKGCC 221
           +     N A+  +GT I V     A G++GCC
Sbjct: 187 A--AAANSAIPGQGTTINVEDTSGA-GKRGCC 215

[Close]

BLAST of CmaCh07G013160 vs. NCBI nr
Match: gi|449464898|ref|XP_004150166.1| (PREDICTED: ras-related protein RABA4d [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 1.8e-116
Identity = 215/223 (96.41%), Postives = 218/223 (97.76%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGT+IVVPGQ+Q  GRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

[Close]

BLAST of CmaCh07G013160 vs. NCBI nr
Match: gi|659121765|ref|XP_008460801.1| (PREDICTED: ras-related protein RABA4d [Cucumis melo])

HSP 1 Score: 426.8 bits (1096), Expect = 2.3e-116
Identity = 215/223 (96.41%), Postives = 217/223 (97.31%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGTNIVVPGQ+Q  G KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

[Close]

BLAST of CmaCh07G013160 vs. NCBI nr
Match: gi|1009106149|ref|XP_015872112.1| (PREDICTED: ras-related protein RABA4d [Ziziphus jujuba])

HSP 1 Score: 387.9 bits (995), Expect = 1.2e-104
Identity = 198/222 (89.19%), Postives = 205/222 (92.34%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  SKIVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQ-AGGRKGCCF 222
           SKK+L A + ID      L KGT I+VPGQEQ +GG KGCCF
Sbjct: 181 SKKTLTASDDIDSN-GSGLLKGTKIIVPGQEQDSGGGKGCCF 221

[Close]

BLAST of CmaCh07G013160 vs. NCBI nr
Match: gi|567857618|ref|XP_006421492.1| (hypothetical protein CICLE_v10005824mg [Citrus clementina])

HSP 1 Score: 383.3 bits (983), Expect = 3.0e-103
Identity = 191/224 (85.27%), Postives = 206/224 (91.96%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLL+RF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  +LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQ-AGGRKGCCFAS 224
           SKKSL A +  D+  N  L KGT I+VPGQ+Q +  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

[Close]

BLAST of CmaCh07G013160 vs. NCBI nr
Match: gi|685266638|ref|XP_009120881.1| (PREDICTED: ras-related protein RABA4d [Brassica rapa])

HSP 1 Score: 382.9 bits (982), Expect = 3.9e-103
Identity = 192/220 (87.27%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P +E++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEEESGKRGGCC 219

The following BLAST results are available for this feature:

BLAST of CmaCh07G013160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA4D_ARATH	5.4e-105	86.82	Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1 SV=1	[more]
RLGP1_ORYSJ	1.0e-95	80.37	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2	[more]
RAA4C_ARATH	1.9e-94	77.13	Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2 SV=1	[more]
RB11A_LOTJA	4.6e-88	75.57	Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1	[more]
RB11C_TOBAC	3.7e-85	71.95	Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1	[more]

BLAST of CmaCh07G013160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW90_CUCSA	1.3e-116	96.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152280 PE=4 SV=1	[more]
V4S363_9ROSI	2.1e-103	85.27	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005824mg PE=4 SV=1	[more]
A0A067F1B3_CITSI	2.1e-103	85.27	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027382mg PE=4 SV=1	[more]
M4FC85_BRARP	2.7e-103	87.27	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A078IRM3_BRANA	2.7e-103	87.27	BnaA01g30820D protein OS=Brassica napus GN=BnaCnng23010D PE=4 SV=1	[more]

BLAST of CmaCh07G013160 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12160.1	3.1e-106	86.82	RAB GTPase homolog A4D	[more]
AT5G47960.1	1.1e-95	77.13	RAB GTPase homolog A4C	[more]
AT5G65270.1	1.6e-83	71.69	RAB GTPase homolog A4A	[more]
AT4G39990.1	2.2e-80	68.02	RAB GTPase homolog A4B	[more]
AT5G59150.1	1.1e-71	65.57	RAB GTPase homolog A2D	[more]

BLAST of CmaCh07G013160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464898\|ref\|XP_004150166.1\|	1.8e-116	96.41	PREDICTED: ras-related protein RABA4d [Cucumis sativus]	[more]
gi\|659121765\|ref\|XP_008460801.1\|	2.3e-116	96.41	PREDICTED: ras-related protein RABA4d [Cucumis melo]	[more]
gi\|1009106149\|ref\|XP_015872112.1\|	1.2e-104	89.19	PREDICTED: ras-related protein RABA4d [Ziziphus jujuba]	[more]
gi\|567857618\|ref\|XP_006421492.1\|	3.0e-103	85.27	hypothetical protein CICLE_v10005824mg [Citrus clementina]	[more]
gi\|685266638\|ref\|XP_009120881.1\|	3.9e-103	87.27	PREDICTED: ras-related protein RABA4d [Brassica rapa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009827	plant-type cell wall modification
biological_process	GO:0080092	regulation of pollen tube growth
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0045177	apical part of cell
cellular_component	GO:0070382	exocytic vesicle
cellular_component	GO:0016020	membrane
cellular_component	GO:0090404	pollen tube tip
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019900	kinase binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G013160.1	CmaCh07G013160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 17..177 score: 2.8
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 15..169 score: 1.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 9..201 score: 3.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..183 score: 9.89
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 16..37 score: 1.5E-41coord: 154..176 score: 1.5E-41coord: 39..55 score: 1.5E-41coord: 119..132 score: 1.5E-41coord: 57..79 score: 1.5
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 8..222 score: 1.9E
None	No IPR available	PANTHER	PTHR24073:SF578	RAS-RELATED PROTEIN RABA4D	coord: 8..222 score: 1.9E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 score: 2.5
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 18..176 score: 2.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 score: 4.0E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..214 score: 1.
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 score: 0.
None	No IPR available	PROFILE	PS51419	RAB	coord: 11..220 score: 35

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh07G013160	MELO3C023181	Melon (DHL92) v3.5.1	cmameB808
CmaCh07G013160	CmoCh07G013610	Cucurbita moschata (Rifu)	cmacmoB875
CmaCh07G013160	Lsi01G018930	Bottle gourd (USVL1VR-Ls)	cmalsiB790
CmaCh07G013160	Cp4.1LG19g00520	Cucurbita pepo (Zucchini)	cmacpeB880
CmaCh07G013160	MELO3C023181.2	Melon (DHL92) v3.6.1	cmamedB911
CmaCh07G013160	Bhi03G002125	Wax gourd	cmawgoB1075
CmaCh07G013160	Carg12738	Silver-seed gourd	carcmaB0398

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh07G013160	Wax gourd	cmawgoB1067
CmaCh07G013160	Cucurbita maxima (Rimu)	cmacmaB525
CmaCh07G013160	Cucurbita maxima (Rimu)	cmacmaB530
CmaCh07G013160	Cucurbita moschata (Rifu)	cmacmoB863
CmaCh07G013160	Wild cucumber (PI 183967)	cmacpiB885
CmaCh07G013160	Cucumber (Chinese Long) v2	cmacuB868
CmaCh07G013160	Melon (DHL92) v3.5.1	cmameB810
CmaCh07G013160	Watermelon (Charleston Gray)	cmawcgB770
CmaCh07G013160	Watermelon (97103) v1	cmawmB840
CmaCh07G013160	Cucurbita pepo (Zucchini)	cmacpeB863
CmaCh07G013160	Bottle gourd (USVL1VR-Ls)	cmalsiB792
CmaCh07G013160	Cucumber (Gy14) v2	cgybcmaB571
CmaCh07G013160	Melon (DHL92) v3.6.1	cmamedB908
CmaCh07G013160	Silver-seed gourd	carcmaB0268
CmaCh07G013160	Cucumber (Chinese Long) v3	cmacucB1024
CmaCh07G013160	Watermelon (97103) v2	cmawmbB899