CmoCh07G013610 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G013610
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRAC-like GTP binding protein 5
LocationCmo_Chr07 : 7692472 .. 7697778 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTTCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGGTATGTTGGTTTAATTCTTCTTGTTTTGTTTCTCGTCGAGTACTTCATTGTGTTCATGCTTTTGGATCTGTGATAGCTTTTAGAGATGAATATTGGAATGTGCTCTTCAACTTTGTTCTAACTTATAGCTTGAGTAGATGAATGATTGTATGATACAACATAGGATTTGTAACAGGCTAAGCCCACCGCTAGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCTTTTTAAAGCCTTGAGGAAAAGCTTAGAAGGAAAGGCCCAAAGAGGACAATATTTGCTAGCGGTGAGCTTGAGGTGTTACAAATGGTATTAGAGCCAGACACTGGGCGGTTTGCTAACGAGGACGCTGGGCCCCCAAGGGGGGTGGATTGTTAGACCCTACATCGATTGTTGAGAGAAACGAAGTATTACTTATAAGAGTGTGGAAACCTCTCCCTAGCAGACAGATGCAGTTTGAAACCTCGAGGGGAAGCCCAAAGAGGAATATCTATTAGTGGTGGGCTTGGGGATTCCACACCCTTATGAAGAATGTTTTGTTCTCCTCTCCAACCAATGTGGGATCTTACAATAAGGATAGTTTCTAGATGAGTACCCATTTCATTGCACAGCTCTAAAAGATGCGTTTTAAAACCTTGAGGGGAAACCTAAAGAGGACAATATTTGCTAGCGTGAGTTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCAAGCAGTATGCCAGCGAGCACGCTGGGCCCCTAAGGGGGTGGATTGTGAGACCCCACGTCAGTTGGAGAGGGGAACGATGTTTGGAATCACGGATCTCCACAATTGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGATTTGGGCTTTCCTAAAAGGCCTCATACCAATGGAGATAGTATTCTTTGCTTATAAACCCATAATCATTCCCTAAATTAGCCAATGTGGGACTCACCCAACAATCCTCAACAATCCTCTCCTCGAACAAAGTACACTATAAGCCTCCCTTTAATCGAGGCTCGACTCCTTTTTCTGGAGCCCTCGAACAAAGTACCCTCTTTGTTCGACACTTTAGTTACTTTTGACTACACCTTCGAGGCTCACAATTCGTTGTTCGATATTTGAGGATTCTATTGTCATGACTAGGTTTAGGGCATGGCTCTGATACCATACGGATCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGACCTCATACCAATGGAGATAGTATTTCTTGCTTATAAACTCATGATCATTCACTAAATTAGCCAAGGTAGGACTCACACCCAACAATCCTTAACAAACGAAGCATTCCTTATAAGGGTGTGGAAACCCCTCACTAGTAGACGCGTTTTAAAGCTTTGAAGAGAAACTCGAAAGGGAAAGCCAAAAGTGGACAGTGGCTTGGGCTTTTATAGAATTAGAGAGCAAAGAGTTTGGAACCCTTGAATAGGATTGAAACTTGTTTTGTTGTTGTTTTCTCTGTACTCTCAAATCTAGAGAGATTGCAGAGATCCATTTATGTTTGAATGAGCTTGTGGTGATATCAGCTTTTGTGTATTAGCATGGTCTACTTTCTATTATTTTTTCCTGTGTTTCTTATATATAGCTGCAGCGCATTCTTGTCCTGTTTCAGATTTATTGATATTGTTGTGATAAGATCGATAAGTCATAGGTTTGTTTTATGTATGCTTGGAAAAGACATAATGAAAGAATGAGTTGTTGGGAGAAAAATGAGAAGGGTTTGATCTATGTGGGACTCGAGTATGAGGCCCGATTTTCGTGATTCTCTTATTGTAGGATCGGAATGCAAACACAAGAGGACTCGGTTCTGCATAAATTTGAGAGGAAGGTAGGGGAAAAGGTGAGTGAAGTCGGGGGGGAGTCGGGAGACCTTTCTCGAGTTTGTTAACTTTTGTTCTTTTGCTAAGAGGATTGATACAAAAGTGTATTTCAAGTCAGGGAAGTTCTATCAAATTGCTATTAGAGAATTTTCTTAGGCATGCCTTGGAGTCACTCGAGTTGCACTTAGGATTAGTTGTGCGGAAGCTTGATGTAAGAGCCTAAGTCCACCGCTAGCAGATACTGTTCTCTTTGGGCTTTCCCTTTCAGGCTTCCCCTCAAGGTTTCTAAAACGCGTTTGCTAGGGAGAGATTTTCATACCCTTATAAAGAATGCTTCGTTCCCCTCTCCAATCGATATGGGTTCTTTTAATCCACCCCCTTCGGGGTTCGTCCAACATCCTCGCTAGCACACCGCCTGGTGTCCACCCCCTTTAGATTTCAGCCTCCTCGGTAGCCCATCACCTGGTGTCTGGCTCTAATATAATTTGTAACAGCTCAAGCCTACTGCTAGCAGATATTGTCCTCTTTGGGCCTTTCCCTCAAGATTTTTAAAACGCATCTGCTAGGGAGAGATTTCCATACCCTTGTAAAGAATGTTTCGTTCTTCTTTTCAATCGATGTGGGATTTCATAACCCATTCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCCCCCCCCCCCCGTATGCCCAACATCTTCGCTGGCACTCGTTCCCCTCTCCAATCGATGTGGGACCCCCCAGTCCACCCCATTCAGGGCTTAGCGTCTTGGCTGACACACTGCTTGGTGTCGATCCCCCTTTAGAATTCAGCCTCATCGCTAGCACATCATCCGATGTCTGACTTTGTAACCGCCCAAGCCCACTGCAAGCAAATATTGTCCCCTTTGGGCTTTTCTTTTCGAGTTTCTCCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGGTTCGTTCTCCTCTCCAATTGATGTGGGATCTCTCACCTGAAGTGCCAAGTAACGGAAAGGACATCATCATTTGGATTAACCAATGAATAAGTTGCTGAAGCAAAGGGAGGAGGAATGAATTGTGACAAGGGACAAGACAGTTGAATTAAGGAGAGGGAGAGGCCAGTGAGATAATGAGGAGGAAGTCAGGCATAAATGAACTAACCGCAAGAAGGCTAGAGCTGCCTCAATTGAATGGAGTCAATCCGGATGGATGGAGGAGTCGTCAATCTCTTTGCACTCGGTGAAGTTCAAGCTGGTGACGATAGCTCGATTTCTTACGACATCACATGAAGCAACGCCATATGAGCTTTTTTTTAGCTCTACAACAGGAGAGGAGTCCGTACTAACTCAATGGATTGGCAGAGCAATGGTGGACGCCCCATCGAAAAGGTGGAAGTTTGGATGGGGTCTTGATGAATAAACGAGCCACGAGTTCGGTTTACGTATTCGAGGAAGAAAACGAGAGAATTGGGTTAACTTGAATGCTAACCAGAATGGTGTGAGTCATGCAGGACTCAAATTAGTTAGGAGTAGTGAGGTGCATCGTTTATAATTCCGATATCATCAGACGTGAGAGATGTCACCACCAAGGCATCTTGAAAGTGAATCATATTCGTCGAAGGAGAACGTTATGGAATAGTTGAGGAGAGTTCGATACGTATATCTGACGAAATTAGATTCCGAAAATTGATGTTATGAACTTAAATTGTGTAGATTACGATGAAGTTGTTCATAGTTTCTTATGATATCTTTGTTATCTCCATTGTCAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACGAAGCGTCAATCGTTCGACCACATGGCGCGGTGGCTGGAGGAGCTAAGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCAGTGCCAACAGAAGATGCACAGGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTTGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGACCAGGCTGGTGGGAGAAAAGGGTGCTGCTTTGCCTCATGA

mRNA sequence

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTTCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACGAAGCGTCAATCGTTCGACCACATGGCGCGGTGGCTGGAGGAGCTAAGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCAGTGCCAACAGAAGATGCACAGGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTTGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGACCAGGCTGGTGGGAGAAAAGGGTGCTGCTTTGCCTCATGA

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTTCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACGAAGCGTCAATCGTTCGACCACATGGCGCGGTGGCTGGAGGAGCTAAGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCAGTGCCAACAGAAGATGCACAGGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTTGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGACCAGGCTGGTGGGAGAAAAGGGTGCTGCTTTGCCTCATGA
Homology
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BLAST of CmoCh07G013610 vs. Swiss-Prot
Match: RAA4D_ARATH (Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-104
Identity = 191/220 (86.82%), Postives = 203/220 (92.27%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P + ++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

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BLAST of CmoCh07G013610 vs. Swiss-Prot
Match: RLGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2)

HSP 1 Score: 349.4 bits (895), Expect = 3.0e-95
Identity = 175/219 (79.91%), Postives = 193/219 (88.13%), Query Frame = 1 

Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG+  QKIDYVFKVVLIGDSAVGK+QLL+RF+RNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIM
Sbjct: 68  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DLG+LR VPTEDA+EFAERENLFFMETSALESTNVE AF  +LTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187

Query: 185 LAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 224
           L A E +D   N +L KGT IVVPGQ+ A   K  C  S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

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BLAST of CmoCh07G013610 vs. Swiss-Prot
Match: RAA4C_ARATH (Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.3e-94
Identity = 171/223 (76.68%), Postives = 196/223 (87.89%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLL+RFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F  +LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 224
           SKK+L A E  + G + +L +GT IVV G++     KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

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BLAST of CmoCh07G013610 vs. Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.3e-87
Identity = 166/221 (75.11%), Postives = 189/221 (85.52%), Query Frame = 1 

Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD N KIDYVFKVVLIGDSAVGK+Q+L+RF+RNEFS+DSK+TIGVEFQT+TLVID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNKCDL + R VPTEDA+EFAE+E LFF+ETSALE+TNVE+AF  +LTEIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186

Query: 185 LAAGESIDIGVNPALFKGTNIVVPG--QDQAGGRKGCCFAS 224
           LAA ES   G N A   G  I++PG  Q+    R  CC AS
Sbjct: 187 LAADESQGNG-NSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226

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BLAST of CmoCh07G013610 vs. Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.7e-85
Identity = 159/221 (71.95%), Postives = 187/221 (84.62%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           M++ YGD +QKIDYVFKVVLIGDSAVGKTQ+L+RF+RNEFS+DSKATIGVEFQT+TLVI 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIML GNK DL   RAVPTEDA+EFA++E LFF+ETSA+E+T +E AF  +LTEI+ I+
Sbjct: 121 IVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQA-GGRKGCC 221
           +KK+LAA E+     NPA   G  I+VPG  Q   G+K CC
Sbjct: 181 NKKNLAADEN-QSNSNPASLTGKKILVPGPGQVIPGKKACC 220

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BLAST of CmoCh07G013610 vs. TrEMBL
Match: A0A0A0KW90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152280 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 4.3e-117
Identity = 216/223 (96.86%), Postives = 218/223 (97.76%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGT+IVVPGQDQ  GRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

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BLAST of CmoCh07G013610 vs. TrEMBL
Match: A0A067F1B3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027382mg PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 7.1e-104
Identity = 192/224 (85.71%), Postives = 206/224 (91.96%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLL+RF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  +LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQ-AGGRKGCCFAS 224
           SKKSL A +  D+  N  L KGT I+VPGQDQ +  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

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BLAST of CmoCh07G013610 vs. TrEMBL
Match: V4S363_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005824mg PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 7.1e-104
Identity = 192/224 (85.71%), Postives = 206/224 (91.96%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLL+RF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  +LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQ-AGGRKGCCFAS 224
           SKKSL A +  D+  N  L KGT I+VPGQDQ +  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

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BLAST of CmoCh07G013610 vs. TrEMBL
Match: M4FC85_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 7.9e-103
Identity = 191/220 (86.82%), Postives = 204/220 (92.73%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P ++++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEEESGKRGGCC 219

[Close]
BLAST of CmoCh07G013610 vs. TrEMBL
Match: A0A078IRM3_BRANA (BnaA01g30820D protein OS=Brassica napus GN=BnaCnng23010D PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 7.9e-103
Identity = 191/220 (86.82%), Postives = 204/220 (92.73%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P ++++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEEESGKRGGCC 219

[Close]
BLAST of CmoCh07G013610 vs. TAIR10
Match: AT3G12160.1 (AT3G12160.1 RAB GTPase homolog A4D)

HSP 1 Score: 380.6 bits (976), Expect = 6.8e-106
Identity = 191/220 (86.82%), Postives = 203/220 (92.27%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P + ++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]
BLAST of CmoCh07G013610 vs. TAIR10
Match: AT5G47960.1 (AT5G47960.1 RAB GTPase homolog A4C)

HSP 1 Score: 345.5 bits (885), Expect = 2.4e-95
Identity = 171/223 (76.68%), Postives = 196/223 (87.89%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLL+RFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F  +LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 224
           SKK+L A E  + G + +L +GT IVV G++     KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

[Close]
BLAST of CmoCh07G013610 vs. TAIR10
Match: AT5G65270.1 (AT5G65270.1 RAB GTPase homolog A4A)

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-83
Identity = 157/219 (71.69%), Postives = 184/219 (84.02%), Query Frame = 1 

Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD +QKIDYVFKVVLIGDSAVGK+Q+L+R++R+EFS+DSKATIGVEFQT+TLVID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DL   RA+PTEDA+EFAE+E LFF+ETSA  +TNVE+AF  +LTEI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186

Query: 185 LAAGESIDIGVNPALFKGTNI-VVPGQDQAGGRKG--CC 221
           LAA E  + G NP    G  I +VPG  Q    K   CC
Sbjct: 187 LAASEDQENG-NPGSLAGKKIDIVPGPGQVIPNKSNMCC 224

[Close]
BLAST of CmoCh07G013610 vs. TAIR10
Match: AT4G39990.1 (AT4G39990.1 RAB GTPase homolog A4B)

HSP 1 Score: 295.0 bits (754), Expect = 3.8e-80
Identity = 151/222 (68.02%), Postives = 183/222 (82.43%), Query Frame = 1 

Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG  + K+DYVFKVVLIGDSAVGK+QLL+RF+R+EFS+DSKATIGVEFQT+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DL   RAVPTEDA+EFAE+E LFF+ETSAL +TNVE +F  ++T+IY  ++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186

Query: 185 LAA-GESIDIGVNPALFKGTNIVVPGQDQAGGRK--GCCFAS 224
           LA+ G+S     NP    G  I++PG  Q    K   CC +S
Sbjct: 187 LASEGDS----NNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]
BLAST of CmoCh07G013610 vs. TAIR10
Match: AT5G59150.1 (AT5G59150.1 RAB GTPase homolog A2D)

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-71
Identity = 137/212 (64.62%), Postives = 166/212 (78.30%), Query Frame = 1 

Query: 10  QKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIW 69
           Q  DY+FK+VLIGDS VGKT +LSRF+RNEF ++SK+TIGVEF T+TL ++ KTVKAQIW
Sbjct: 7   QDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66

Query: 70  DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNK 129
           DTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GNK
Sbjct: 67  DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNK 126

Query: 130 CDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKSLAAGE 189
            DL  LR+V  ED Q  AE E L F+ETSALE+TNVE AF  +L EIY IISKK+LAA E
Sbjct: 127 ADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQE 186

Query: 190 SIDIGVNPALFKGTNIVVPGQDQAG-GRKGCC 221
           +     N A+  G    +  +D +G G++GCC
Sbjct: 187 A--AAANSAI-PGQGTTINVEDTSGAGKRGCC 215

[Close]
BLAST of CmoCh07G013610 vs. NCBI nr
Match: gi|449464898|ref|XP_004150166.1| (PREDICTED: ras-related protein RABA4d [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 6.2e-117
Identity = 216/223 (96.86%), Postives = 218/223 (97.76%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGT+IVVPGQDQ  GRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

[Close]
BLAST of CmoCh07G013610 vs. NCBI nr
Match: gi|659121765|ref|XP_008460801.1| (PREDICTED: ras-related protein RABA4d [Cucumis melo])

HSP 1 Score: 428.3 bits (1100), Expect = 8.1e-117
Identity = 216/223 (96.86%), Postives = 217/223 (97.31%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGTNIVVPGQDQ  G KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

[Close]
BLAST of CmoCh07G013610 vs. NCBI nr
Match: gi|1009106149|ref|XP_015872112.1| (PREDICTED: ras-related protein RABA4d [Ziziphus jujuba])

HSP 1 Score: 386.7 bits (992), Expect = 2.7e-104
Identity = 197/222 (88.74%), Postives = 205/222 (92.34%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  SKIVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQ-AGGRKGCCF 222
           SKK+L A + ID      L KGT I+VPGQ+Q +GG KGCCF
Sbjct: 181 SKKTLTASDDIDSN-GSGLLKGTKIIVPGQEQDSGGGKGCCF 221

[Close]
BLAST of CmoCh07G013610 vs. NCBI nr
Match: gi|567857618|ref|XP_006421492.1| (hypothetical protein CICLE_v10005824mg [Citrus clementina])

HSP 1 Score: 384.8 bits (987), Expect = 1.0e-103
Identity = 192/224 (85.71%), Postives = 206/224 (91.96%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLL+RF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  +LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQ-AGGRKGCCFAS 224
           SKKSL A +  D+  N  L KGT I+VPGQDQ +  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

[Close]
BLAST of CmoCh07G013610 vs. NCBI nr
Match: gi|685266638|ref|XP_009120881.1| (PREDICTED: ras-related protein RABA4d [Brassica rapa])

HSP 1 Score: 381.3 bits (978), Expect = 1.1e-102
Identity = 191/220 (86.82%), Postives = 204/220 (92.73%), Query Frame = 1 

Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P ++++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEEESGKRGGCC 219

The following BLAST results are available for this feature:
BLAST of CmoCh07G013610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAA4D_ARATH1.2e-10486.82Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1 SV=1[more]
RLGP1_ORYSJ3.0e-9579.91Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2[more]
RAA4C_ARATH4.3e-9476.68Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2 SV=1[more]
RB11A_LOTJA1.3e-8775.11Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1[more]
RB11C_TOBAC3.7e-8571.95Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1[more]
BLAST of CmoCh07G013610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW90_CUCSA4.3e-11796.86Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152280 PE=4 SV=1[more]
A0A067F1B3_CITSI7.1e-10485.71Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027382mg PE=4 SV=1[more]
V4S363_9ROSI7.1e-10485.71Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005824mg PE=4 SV=1[more]
M4FC85_BRARP7.9e-10386.82Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A078IRM3_BRANA7.9e-10386.82BnaA01g30820D protein OS=Brassica napus GN=BnaCnng23010D PE=4 SV=1[more]
BLAST of CmoCh07G013610 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12160.16.8e-10686.82 RAB GTPase homolog A4D[more]
AT5G47960.12.4e-9576.68 RAB GTPase homolog A4C[more]
AT5G65270.11.6e-8371.69 RAB GTPase homolog A4A[more]
AT4G39990.13.8e-8068.02 RAB GTPase homolog A4B[more]
AT5G59150.11.1e-7164.62 RAB GTPase homolog A2D[more]
BLAST of CmoCh07G013610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464898|ref|XP_004150166.1|6.2e-11796.86PREDICTED: ras-related protein RABA4d [Cucumis sativus][more]
gi|659121765|ref|XP_008460801.1|8.1e-11796.86PREDICTED: ras-related protein RABA4d [Cucumis melo][more]
gi|1009106149|ref|XP_015872112.1|2.7e-10488.74PREDICTED: ras-related protein RABA4d [Ziziphus jujuba][more]
gi|567857618|ref|XP_006421492.1|1.0e-10385.71hypothetical protein CICLE_v10005824mg [Citrus clementina][more]
gi|685266638|ref|XP_009120881.1|1.1e-10286.82PREDICTED: ras-related protein RABA4d [Brassica rapa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008152 metabolic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0009827 plant-type cell wall modification
biological_process GO:0080092 regulation of pollen tube growth
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0008150 biological_process
cellular_component GO:0045177 apical part of cell
cellular_component GO:0070382 exocytic vesicle
cellular_component GO:0016020 membrane
cellular_component GO:0090404 pollen tube tip
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0019900 kinase binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G013610.1CmoCh07G013610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 17..177
score: 2.8
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 15..169
score: 1.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 9..193
score: 3.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..183
score: 9.89
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 16..37
score: 1.5E-41coord: 154..176
score: 1.5E-41coord: 39..55
score: 1.5E-41coord: 119..132
score: 1.5E-41coord: 57..79
score: 1.5
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 8..222
score: 1.6E
NoneNo IPR availablePANTHERPTHR24073:SF578RAS-RELATED PROTEIN RABA4Dcoord: 8..222
score: 1.6E
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 13..179
score: 2.5
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 18..176
score: 2.4
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 16..179
score: 4.0E
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 21..214
score: 7.
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..181
score: 0.
NoneNo IPR availablePROFILEPS51419RABcoord: 11..220
score: 35

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G013610CmaCh07G013160Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G013610MELO3C023181Melon (DHL92) v3.5.1cmomeB792
CmoCh07G013610Lsi01G018930Bottle gourd (USVL1VR-Ls)cmolsiB778
CmoCh07G013610Cp4.1LG19g00520Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G013610MELO3C023181.2Melon (DHL92) v3.6.1cmomedB899
CmoCh07G013610Bhi03G002125Wax gourdcmowgoB1068
CmoCh07G013610Carg12738Silver-seed gourdcarcmoB0395
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G013610Cucumber (Chinese Long) v3cmocucB1008
CmoCh07G013610Watermelon (97103) v2cmowmbB869
CmoCh07G013610Wax gourdcmowgoB1061
CmoCh07G013610Cucurbita moschata (Rifu)cmocmoB461
CmoCh07G013610Cucurbita maxima (Rimu)cmacmoB674
CmoCh07G013610Wild cucumber (PI 183967)cmocpiB865
CmoCh07G013610Cucumber (Chinese Long) v2cmocuB857
CmoCh07G013610Melon (DHL92) v3.5.1cmomeB794
CmoCh07G013610Watermelon (Charleston Gray)cmowcgB771
CmoCh07G013610Watermelon (97103) v1cmowmB829
CmoCh07G013610Cucurbita pepo (Zucchini)cmocpeB803
CmoCh07G013610Bottle gourd (USVL1VR-Ls)cmolsiB780
CmoCh07G013610Cucumber (Gy14) v2cgybcmoB546
CmoCh07G013610Melon (DHL92) v3.6.1cmomedB898
CmoCh07G013610Silver-seed gourdcarcmoB0275