CmaCh07G013160.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G013160.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RAC-like GTP binding protein 5
Location	Cma_Chr07 : 7439253 .. 7443271 (-)
Sequence length	968

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTGATTGATTGATTGATTGATTGATTGATTGATCGATTCTTCTGCTTCGTGGTTTGATTTTGGGGTTTCCCAGTTGTTATGATCGGGAAATGGGAAATTTCTTTGAGTTATAGGGCTTCTATGTGTCTAATCTGCGTGTTTTAGAGGTGGGTTTGTGGGGAATTTTGAAGAGAAAATTAGAATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGGTATGTTGGTTTAATTCTTCTTGTTTTGTTTCTTGTGGAGTACTTCATTGTGTTCATGCTTTTGGATCTGTGATAGCTTTTAGAGATGAAAATTGGAATGTGCTCTTCAACTTTGTTGTAACTTATAGCTTAGAGTAGATGAATCATTGTATGATATAGCATGGAATTTGTAATAGCCCAAGCCCATCGCTAAGAGAATGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCGTAGTTAAAGCCTTGAGGGGAAGTCTGAAAGGGGAAGTTTAAAGAGGACAATATCTACTTACGGTGGGCTTGGGCTGTTACAAATTGTATCAGAGCCAGACACCGAGCAGTGTGCCCAACGAGGACGTTGGGTCCCCAAAGGGGTAGATTGTAAGATCCCACGTCGAATAGAGAGGAGAACCACACATTCCTTATAAGGGTGTGGAAACTTCTCCCGAGCAGATGCGTTTTAAAACCTTGAGGGGAAGTCCAAAAGGGAAATCGCAAAAAGGGAAATATCTGTTAGCGGTGGGTTTGGGGTTCCCACGCTCTTATAAAGAATGTTTCGTTCTCCTCTTCAACCAATGTGGGGTCTTACAATATGAGGATAATATCTGGATGAGTACCAATTTCGTTGCATAACTCTAAAATACGCGTTTTAAAACCTTGAGGAGAAGTCCAAATAATACAATATCTGCTAGCGGCAGGCTTGGGCTAATACAAATGATATCAAAGTCAGACACCAAACGGTGTGCTAGCAAGAACGTTGGGCCTCCAAGGGGGGTGGATTGTGAGACCCCACATCGGTCGGAGAGGATAACGAAACATTCCTTATAAGGGTGTGAAAACCTCTTCCTAGTAGACATGTTTTAAAGCCTTGAGGGGAAGTCCGGAAGGGAAAGTCGAAAAGATGACAACATCTGCTAGCGGTAGCTTGGGCTGTTATAGAATTAGACGGCATAGATAGCAAAGAGTTCGGAAGCGTTTAATAGAATTGAAACTTGTTTTGTTATTGTTTTCTCTGTACTCTCAAATCCAGAGAGATTGGAGAGATACATTTATGTTTGAATGAACTTGTGGTGATTGGAATAGTGTTCATGTTCCTTTTTATTCTTTCGGAGATTGCAGAAGTTATTTTTCTCTTCATTTTATGTTTTTCTGTTTTTTTATTATATGTAGCTGCAGTGCATTCTTGTCCTGTTTTAGATTTATTGAAATTGTTGTAATAAGATCGATAAGTCATAGGTTTGGTTTATGTATGCTTGGAAAAGACATAATGAAAGAATGAGTTGTTGGGAGAAAAATGAGAAGGGTTTGATCTATGTGGGACTCGAGTAGTTCGGCACAGTGAGGCCCGACTTTCGTGATTCTCTTGTTGTAGGGTCGGAATGCAAACACAAGAGGACTCGGTTCTGCATAAATTCGAGAGGAAGGTAGGGGAGAGTGATGGAAAAGGTGAGTGAAGTCGGGGGGGAGTCGGATACCTTTCTCGAGTTTGCTAACTTTTGTTATCAAAAGTGTATTTCAAGTTAGGGAAATTCTATCAAATTGCTATTAGAGAACTTTCTTAGGCATACCTAAGAGTCAAGTGGAATGAGAACTAGTAGATATTGCTCTCTTTGAGCTTTCCCTTTTGGGCTTTCCCTCAAGGGAGAGGTTTCCATACCCTTATAAAGAATGTTTTGTTCTCCTCTTCAATCGATATGAGATCTTTCAATCCACCCTCTTTGGGGCCCAACATCCTTGCTAGCACACCGCCTGGTGTCCACCCCCTTCGGAGTTCAGCCTCCTAGCTGGCACATCACCTGGTGTCTAGCTCTGATATAATTTGTAACGGCTCAAGTCCACTTCTATCAGATATTGTCCTCTTTGAGTTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGCATCTGCAAGGGAGAGATTTCCACACCCTTATAGAAAATGTTTCGTTCCTCTCTCCAATCGATGTGGGATCCTATAACCCCCCCTAGGCCCAACATCCTCACTGGCACTCATTCCCCTCTTCAATCGATGTGGGACCCCCCAATCCACCCTCATTTAGGGCTTAGCGTCTTGGCTGGCACACCGCCTGGTGTCGATCCCCCTTCGGAGTTCAGCATCATCCATCGAATGTCTGACTCTGATATCATTTGTAACCGCCCAAGCCCACTGCTAGCAAATATTGTCCCTTTTGGGCTTTTCTTTTCGAGTTTCCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCCCGTCTCCAATTGATGTGGGATCTCACACTTGAAGTGCCTAAGTAACGGAAAGGACATTATCATTTGGATTAACCAATGAATAAGTTGCTGAAGCAAAGGGAGGAGGAATGAATTGTGACGAGGGACAAGACAGTTGAATTAAGGAGAGGGAGAGGCTAGTGAGATAATGAGGAGGAAGTCAGGCATAAATGAACTAACCACAAGAAGGCTAGAGCTGCCTCAATTGAATGGAGTCAATCCGAATGGATGGACGAGTCGTCAATCTCTTTGCACTCGGTGAAGTTCAAGCTGGCGAAGATAGCTCGATTTCCTACGACATCACATGAAGGAACGCCATATGAGCTTTTCTTAGCTCTACAACAGGAGAGTAGTGTGTACTAACTCAATGGATTGGCAGAGCAATGGTGGACGCCCCATCGAAAAGGTGGAGGTTTGGATGGGGTCATGATGAATAAACGAGCCACGAGTTCGGTTTATGTATTCGAGGAAGAAAACGAGAGAATTGGGTTAACTTGAATGCTAACCAGAAGGGTGTGAGTTATGCAGGACTCAAATTAGTTAGGAGGAGTGAGGTGCGTCATTTATAATTCCGATATCATCAGACGTGAGAGATGTCGAAGGAGAACGTTATGGAATAGTTGAGGAGAGTTCGATACGTATATCTGACGAAATAAGACTCTGAAAATCGATGTTATAAACTTAAATTGTGTAGGTTACGATGAATTTGTTCATAGTTTCTTATGATATCTTGTTATCTCCATTGTTAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACAAAGCGTCAATCGTTCGACCACATGGCACGGTGGCTGGAGGAGCTACGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTGGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGAGCAGGCTGGTGGGAGAAAAGGGTGTTGCTTTGCCTCATGAGTTTCCATATAATTCCATCATCATTTCAGTTGGGACATTGTTTTTCTATTCCACTTTTGATTTATACTAAGAAAAAAAAGATTCATGTATTTGTATTTTGTAGAGGAACTGGC

mRNA sequence

GGTTGATTGATTGATTGATTGATTGATTGATTGATCGATTCTTCTGCTTCGTGGTTTGATTTTGGGGTTTCCCAGTTGTTATGATCGGGAAATGGGAAATTTCTTTGAGTTATAGGGCTTCTATGTGTCTAATCTGCGTGTTTTAGAGGTGGGTTTGTGGGGAATTTTGAAGAGAAAATTAGAATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACAAAGCGTCAATCGTTCGACCACATGGCACGGTGGCTGGAGGAGCTACGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTGGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGAGCAGGCTGGTGGGAGAAAAGGGTGTTGCTTTGCCTCATGAGTTTCCATATAATTCCATCATCATTTCAGTTGGGACATTGTTTTTCTATTCCACTTTTGATTTATACTAAGAAAAAAAAGATTCATGTATTTGTATTTTGTAGAGGAACTGGC

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACAAAGCGTCAATCGTTCGACCACATGGCACGGTGGCTGGAGGAGCTACGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTGGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGAGCAGGCTGGTGGGAGAAAAGGGTGTTGCTTTGCCTCATGA

Protein sequence

MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS

Homology

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BLAST of CmaCh07G013160.1 vs. Swiss-Prot
Match: RAA4D_ARATH (Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 5.4e-105
Identity = 191/220 (86.82%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P ++++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

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BLAST of CmaCh07G013160.1 vs. Swiss-Prot
Match: RLGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2)

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-95
Identity = 176/219 (80.37%), Postives = 193/219 (88.13%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG+  QKIDYVFKVVLIGDSAVGK+QLL+RF+RNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIM
Sbjct: 68  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DLG+LR VPTEDA+EFAERENLFFMETSALESTNVE AF  +LTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187

Query: 185 LAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           L A E +D   N +L KGT IVVPGQE A   K  C  S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

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BLAST of CmaCh07G013160.1 vs. Swiss-Prot
Match: RAA4C_ARATH (Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.9e-94
Identity = 172/223 (77.13%), Postives = 196/223 (87.89%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLL+RFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F  +LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           SKK+L A E  + G + +L +GT IVV G+E     KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

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BLAST of CmaCh07G013160.1 vs. Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.6e-88
Identity = 167/221 (75.57%), Postives = 189/221 (85.52%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD N KIDYVFKVVLIGDSAVGK+Q+L+RF+RNEFS+DSK+TIGVEFQT+TLVID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNKCDL + R VPTEDA+EFAE+E LFF+ETSALE+TNVE+AF  +LTEIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186

Query: 185 LAAGESIDIGVNPALFKGTNIVVPG--QEQAGGRKGCCFAS 224
           LAA ES   G N A   G  I++PG  QE    R  CC AS
Sbjct: 187 LAADESQGNG-NSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226

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BLAST of CmaCh07G013160.1 vs. Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.7e-85
Identity = 159/221 (71.95%), Postives = 187/221 (84.62%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           M++ YGD +QKIDYVFKVVLIGDSAVGKTQ+L+RF+RNEFS+DSKATIGVEFQT+TLVI 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIML GNK DL   RAVPTEDA+EFA++E LFF+ETSA+E+T +E AF  +LTEI+ I+
Sbjct: 121 IVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQA-GGRKGCC 221
           +KK+LAA E+     NPA   G  I+VPG  Q   G+K CC
Sbjct: 181 NKKNLAADEN-QSNSNPASLTGKKILVPGPGQVIPGKKACC 220

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BLAST of CmaCh07G013160.1 vs. TrEMBL
Match: A0A0A0KW90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152280 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.3e-116
Identity = 215/223 (96.41%), Postives = 218/223 (97.76%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGT+IVVPGQ+Q  GRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

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BLAST of CmaCh07G013160.1 vs. TrEMBL
Match: V4S363_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005824mg PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.1e-103
Identity = 191/224 (85.27%), Postives = 206/224 (91.96%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLL+RF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  +LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQ-AGGRKGCCFAS 224
           SKKSL A +  D+  N  L KGT I+VPGQ+Q +  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

[Close]

BLAST of CmaCh07G013160.1 vs. TrEMBL
Match: A0A067F1B3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027382mg PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.1e-103
Identity = 191/224 (85.27%), Postives = 206/224 (91.96%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLL+RF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  +LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQ-AGGRKGCCFAS 224
           SKKSL A +  D+  N  L KGT I+VPGQ+Q +  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

[Close]

BLAST of CmaCh07G013160.1 vs. TrEMBL
Match: M4FC85_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.7e-103
Identity = 192/220 (87.27%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P +E++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEEESGKRGGCC 219

[Close]

BLAST of CmaCh07G013160.1 vs. TrEMBL
Match: A0A078IRM3_BRANA (BnaA01g30820D protein OS=Brassica napus GN=BnaCnng23010D PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.7e-103
Identity = 192/220 (87.27%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P +E++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEEESGKRGGCC 219

[Close]

BLAST of CmaCh07G013160.1 vs. TAIR10
Match: AT3G12160.1 (AT3G12160.1 RAB GTPase homolog A4D)

HSP 1 Score: 381.7 bits (979), Expect = 3.1e-106
Identity = 191/220 (86.82%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P ++++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of CmaCh07G013160.1 vs. TAIR10
Match: AT5G47960.1 (AT5G47960.1 RAB GTPase homolog A4C)

HSP 1 Score: 346.7 bits (888), Expect = 1.1e-95
Identity = 172/223 (77.13%), Postives = 196/223 (87.89%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLL+RFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F  +LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           SKK+L A E  + G + +L +GT IVV G+E     KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

[Close]

BLAST of CmaCh07G013160.1 vs. TAIR10
Match: AT5G65270.1 (AT5G65270.1 RAB GTPase homolog A4A)

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-83
Identity = 157/219 (71.69%), Postives = 184/219 (84.02%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD +QKIDYVFKVVLIGDSAVGK+Q+L+R++R+EFS+DSKATIGVEFQT+TLVID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DL   RA+PTEDA+EFAE+E LFF+ETSA  +TNVE+AF  +LTEI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186

Query: 185 LAAGESIDIGVNPALFKGTNI-VVPGQEQAGGRKG--CC 221
           LAA E  + G NP    G  I +VPG  Q    K   CC
Sbjct: 187 LAASEDQENG-NPGSLAGKKIDIVPGPGQVIPNKSNMCC 224

[Close]

BLAST of CmaCh07G013160.1 vs. TAIR10
Match: AT4G39990.1 (AT4G39990.1 RAB GTPase homolog A4B)

HSP 1 Score: 295.8 bits (756), Expect = 2.2e-80
Identity = 151/222 (68.02%), Postives = 183/222 (82.43%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG  + K+DYVFKVVLIGDSAVGK+QLL+RF+R+EFS+DSKATIGVEFQT+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DL   RAVPTEDA+EFAE+E LFF+ETSAL +TNVE +F  ++T+IY  ++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186

Query: 185 LAA-GESIDIGVNPALFKGTNIVVP--GQEQAGGRKGCCFAS 224
           LA+ G+S     NP    G  I++P  GQE       CC +S
Sbjct: 187 LASEGDS----NNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of CmaCh07G013160.1 vs. TAIR10
Match: AT5G59150.1 (AT5G59150.1 RAB GTPase homolog A2D)

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-71
Identity = 139/212 (65.57%), Postives = 166/212 (78.30%), Query Frame = 1


Query: 10  QKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIW 69
           Q  DY+FK+VLIGDS VGKT +LSRF+RNEF ++SK+TIGVEF T+TL ++ KTVKAQIW
Sbjct: 7   QDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66

Query: 70  DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNK 129
           DTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GNK
Sbjct: 67  DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNK 126

Query: 130 CDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKSLAAGE 189
            DL  LR+V  ED Q  AE E L F+ETSALE+TNVE AF  +L EIY IISKK+LAA E
Sbjct: 127 ADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQE 186

Query: 190 SIDIGVNPAL-FKGTNIVVPGQEQAGGRKGCC 221
           +     N A+  +GT I V     A G++GCC
Sbjct: 187 A--AAANSAIPGQGTTINVEDTSGA-GKRGCC 215

[Close]

BLAST of CmaCh07G013160.1 vs. NCBI nr
Match: gi|449464898|ref|XP_004150166.1| (PREDICTED: ras-related protein RABA4d [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 1.8e-116
Identity = 215/223 (96.41%), Postives = 218/223 (97.76%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGT+IVVPGQ+Q  GRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

[Close]

BLAST of CmaCh07G013160.1 vs. NCBI nr
Match: gi|659121765|ref|XP_008460801.1| (PREDICTED: ras-related protein RABA4d [Cucumis melo])

HSP 1 Score: 426.8 bits (1096), Expect = 2.3e-116
Identity = 215/223 (96.41%), Postives = 217/223 (97.31%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGTNIVVPGQ+Q  G KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

[Close]

BLAST of CmaCh07G013160.1 vs. NCBI nr
Match: gi|1009106149|ref|XP_015872112.1| (PREDICTED: ras-related protein RABA4d [Ziziphus jujuba])

HSP 1 Score: 387.9 bits (995), Expect = 1.2e-104
Identity = 198/222 (89.19%), Postives = 205/222 (92.34%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  SKIVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQ-AGGRKGCCF 222
           SKK+L A + ID      L KGT I+VPGQEQ +GG KGCCF
Sbjct: 181 SKKTLTASDDIDSN-GSGLLKGTKIIVPGQEQDSGGGKGCCF 221

[Close]

BLAST of CmaCh07G013160.1 vs. NCBI nr
Match: gi|567857618|ref|XP_006421492.1| (hypothetical protein CICLE_v10005824mg [Citrus clementina])

HSP 1 Score: 383.3 bits (983), Expect = 3.0e-103
Identity = 191/224 (85.27%), Postives = 206/224 (91.96%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLL+RF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  +LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQ-AGGRKGCCFAS 224
           SKKSL A +  D+  N  L KGT I+VPGQ+Q +  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

[Close]

BLAST of CmaCh07G013160.1 vs. NCBI nr
Match: gi|685266638|ref|XP_009120881.1| (PREDICTED: ras-related protein RABA4d [Brassica rapa])

HSP 1 Score: 382.9 bits (982), Expect = 3.9e-103
Identity = 192/220 (87.27%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCC 221
           SKKSL A +  D   N +L KGT I++P +E++G R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEEESGKRGGCC 219

The following BLAST results are available for this feature:

BLAST of CmaCh07G013160.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA4D_ARATH	5.4e-105	86.82	Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1 SV=1	[more]
RLGP1_ORYSJ	1.0e-95	80.37	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2	[more]
RAA4C_ARATH	1.9e-94	77.13	Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2 SV=1	[more]
RB11A_LOTJA	4.6e-88	75.57	Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1	[more]
RB11C_TOBAC	3.7e-85	71.95	Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1	[more]

BLAST of CmaCh07G013160.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW90_CUCSA	1.3e-116	96.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152280 PE=4 SV=1	[more]
V4S363_9ROSI	2.1e-103	85.27	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005824mg PE=4 SV=1	[more]
A0A067F1B3_CITSI	2.1e-103	85.27	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027382mg PE=4 SV=1	[more]
M4FC85_BRARP	2.7e-103	87.27	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A078IRM3_BRANA	2.7e-103	87.27	BnaA01g30820D protein OS=Brassica napus GN=BnaCnng23010D PE=4 SV=1	[more]

BLAST of CmaCh07G013160.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12160.1	3.1e-106	86.82	RAB GTPase homolog A4D	[more]
AT5G47960.1	1.1e-95	77.13	RAB GTPase homolog A4C	[more]
AT5G65270.1	1.6e-83	71.69	RAB GTPase homolog A4A	[more]
AT4G39990.1	2.2e-80	68.02	RAB GTPase homolog A4B	[more]
AT5G59150.1	1.1e-71	65.57	RAB GTPase homolog A2D	[more]

BLAST of CmaCh07G013160.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464898\|ref\|XP_004150166.1\|	1.8e-116	96.41	PREDICTED: ras-related protein RABA4d [Cucumis sativus]	[more]
gi\|659121765\|ref\|XP_008460801.1\|	2.3e-116	96.41	PREDICTED: ras-related protein RABA4d [Cucumis melo]	[more]
gi\|1009106149\|ref\|XP_015872112.1\|	1.2e-104	89.19	PREDICTED: ras-related protein RABA4d [Ziziphus jujuba]	[more]
gi\|567857618\|ref\|XP_006421492.1\|	3.0e-103	85.27	hypothetical protein CICLE_v10005824mg [Citrus clementina]	[more]
gi\|685266638\|ref\|XP_009120881.1\|	3.9e-103	87.27	PREDICTED: ras-related protein RABA4d [Brassica rapa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009827	plant-type cell wall modification
biological_process	GO:0080092	regulation of pollen tube growth
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0045177	apical part of cell
cellular_component	GO:0070382	exocytic vesicle
cellular_component	GO:0016020	membrane
cellular_component	GO:0090404	pollen tube tip
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0019900	kinase binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh07G013160	CmaCh07G013160	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh07G013160.1	CmaCh07G013160.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G013160.1.three_prime_UTR.1	CmaCh07G013160.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G013160.1.CDS.2	CmaCh07G013160.1.CDS.2	CDS
CmaCh07G013160.1.CDS.1	CmaCh07G013160.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G013160.1.five_prime_UTR.1	CmaCh07G013160.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G013160.1.exon.2	CmaCh07G013160.1.exon.2	exon
CmaCh07G013160.1.exon.1	CmaCh07G013160.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 17..177 score: 2.8
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 15..169 score: 1.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 9..201 score: 3.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..183 score: 9.89
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 16..37 score: 1.5E-41coord: 154..176 score: 1.5E-41coord: 39..55 score: 1.5E-41coord: 119..132 score: 1.5E-41coord: 57..79 score: 1.5
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 8..222 score: 1.9E
None	No IPR available	PANTHER	PTHR24073:SF578	RAS-RELATED PROTEIN RABA4D	coord: 8..222 score: 1.9E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 score: 2.5
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 18..176 score: 2.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 score: 4.0E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..214 score: 1.
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 score: 0.
None	No IPR available	PROFILE	PS51419	RAB	coord: 11..220 score: 35