ClCG04G000360 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG04G000360
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Ras-related protein Rab-25
Location	CG_Chr04 : 1222999 .. 1226700 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAATCTATATGGGGATTATAACCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCTGCTGTAGGCAAAACCCAACTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCCGGACAAGAAAGGTTTGTGCCCTTTCTTTTTATTTTCTTTTTGTGGGGTTCATTGGTTTTTGTTTTCTTTCTCATGGAGACCACTTCATTGTTCAAGGGGTTTGGATCTGTGATAGCTTGTGAAATTGGTAAAATCCAAATGTGCTTTTGAGTTTTTGTGATAATTATTAGGTTTAATAAAATGAATGAATGTATGATAGAAGATAGAATTAGACAGCAAGGAGTTTGGAATCCTCTAATGGAATTATGACTTGTTTGTTCTTGCCTGTTCTCTGTACTTTTAAATCCACAGAGGATGCAGATACCCTATTGGTGTTTGAATGCAGTTGTTGTGATTGGAATTGTGTTGGGGTAAAAGTTTTAACTGAACTTTTTTAAATTGGCCTAGTCTACTCTCAATTGTAGTGTTTGGATTGGAAGGAATGTCAGTAGTGGTGAAAAACCAAGCCTTGGGAGGATATCATCTGAAGAAGTAAAACATGGTGTTAGACAATGATGTCTAGTTGAGATTGTTTCTCACTCATTTTAGAATTGTCCTTAGGTAGATTTCCTCCTCGGCTTACATTGTTGATATTAGGTTTTGCTGTTTAAATCATATTTAGCTGCAGCTTTGGTGCAATCTTGTGCATTTCAGATTAAATGAAATTATTGTGATAGGATTAGTAAGCCATAGGTTTGTCATACATATGCTCAGGAAAGAATGAGAGAATGAGTTGCTAGAAGAAAGCTAATGTGAAGGTGAAGGGTGCGAGTTATGTCCAATGGAGATAGTTTGGAGTAGTGTGGCCCATCAATGAGAATGCATGTAAAAGGGGAGAGAGGTAAAGCATAAATTTGATTTAAAGAAGATGAAAGAAAATGGGAGAGTTTTCAAAAAGATGAGCGAAGTCAGGGAGAGTTGGAGGCATCTCTCAAGGTTGCAACATTTTGTAGTTTGGTTCAGAAGATTACTACAAAAGCGTCTTTACCAATTCAAAATTTCGATGATTAGAGCATTTTCTCAGGGATTCCTAAAGTGAAAAAATTGCAATTTGGGTTGGGTGTTGGAAAGCCCTAAATACTTGGGTGATAGAAAACAATACTGTCCTTTTCTCGATGGGATAAATAAATTGCTGCGGTAAAAGGGATGTGTAACGATTGGTGATGAATAAAGACATTCTTGATAAGGGTAAGGCGATTGTTGAAGAGTCGAATGAAGGAGAGATTAGTAAGACGGTGAGGAGGGAGACAATCATCACCTACAAGAAGTCTAAAGCTGGTTCAATTCGATGGAGCTGTTCTAGATGGATGGATGAATCTTTCAAGCCAAAGGTTATTTCAAGATTATTCAGCAAAATGGATGCAAGTGCTGGAGATCAGTATGGTGAGAGAGGGTCTTGCTTGGTATTGTTTGATGGAGAGTCATCAATCTTTCTGGCGCAAGGTGAAGTTCAAGCTGGTGATGATTGCTTGATTTTTTAATTGCAGTAAAGTACACTATATGAGCATTTATTATCTTTCCAACTCAAGGGCAGCTTGCGTGAGTACAGGAAGATGATGGAAATTCTGACTGATGCTGAGTTGCACCAGTGCAGAAAGTTGGGTGTATGTTTTCGGTGCGAGCTATAGATAGTTGGTATGCCACTTAGTAAGAACAAGGAGTTGAAAACCTTTTTTAATCCAGGACAATAAGAAAGAGTACTATCGTCAGGGCCAGGGATGTATGGCTACCCCATTTCAGCTACTGTATTGCAAACCTCCCCCTGCATTGGTGTACAACCTTCTGTCATCACGGACCAAACTCTTACAAAACTATTATGATTAATTCTTTGGATGACATTAAGTTTCACCTCATCCAGGAGCAGCAGATTATGAAGGGTAATGCCGACAACCGCAGATAAGACATTACTTTTAAGATTGGGGACATGACATTCTTACTAAGTCTGAAGCCACTAAATAATTTCTTATGTCATTTCTTCCCCATCCCTCTACTTATAATGAATCCCTGCTACCAAACTCCTTAGCAATTACTGAGGGTTTATTTGGCAAGTGATCTGAAAACAAGAGACTCAATGAATAACAAAGTTGTATTTCAAGTTTTCAATGTTTTCAAACATGCAATTAGTCCTTGATTTAGAAACTGTATCTCAATTTTAAACGTTGTTCAAAGTGGGTTTGGTAATATATTTATAAACAAAAGTTTTTTTTTTTCTTTTTTTTTTTGGGGTATTCTAGGGAGAGGATGAAAGGATGGAGTAACCATTCTTCATAAAGAGTGTGAGTTATGAGGGGCCTAGCTAGTTAGGAGTAGCAGGGGCAGGTGCACTTTTCGCAATTTCATTATCATTAGATGGGACCAAAAATGTATGGGGAGCAAGAGGGCATAATGTGAGTGAAGCGAAAGGGAAGAGCTATGGAAAAGCTGAGGGAAATTGAGGAAAGTTGTGAACCTCTCTAAAGTTTCACTACCTTAAATACTTTTGTTTTGCATGAAGAAAATGTGGAAAGATGATTATCCATTTATCAACTTTTTCTGGCTTTGATACACATAATTAAATCTCTTCAGTTAGACTTGAGAACAAGTAATGATATCTTGGATCCAATCAATAATCTAGTAGTCATTACTTTTTTGTCCGACTTCCTTGCAATTGATGTATGACATTGATAGAATCTTTGTATTATCACTCAAACAAAATATTGTATTTTTTAAGTTCATCTCCTCTTAAATTCATAATAATTAAACAGCCTCTTTGTTGTATGATTATCAGACATTAAACAAGTTTGGCATGTGGAATGCTAGGAGTCTGTGGTATCAACAATTTAGTATTTGTATTTAAGGCTTATATTGTAATATTTTCCATTTGGTTGCTGATATCAAAACTGACTTATGAAACATTCTGCTTTACATATTTCATTCGGTGTTTGTCAATTTTGACAATTGATCCAACATTGTATCTGATGAAATAGCACACGTGAATTTGACGTTGTTATGTACTTAATTCGTGAATATTGCTGTTAAGCTGGCTTTAGTTTCTGAAACTATGTCGTTTTTCACATTGCCAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCATTCGATCACATGGCAAGGTGGCTGGAGGAACTAAGAGGACATGCTGATAAGAACATCGTTATAATGCTCATCGGAAACAAATGCGACTTAGGAAGTCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCGACGAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGGGCTGTTTAAAGGAAATAGTATAATTGTTCCTGGACAGGACCAGGATTCTGGGAGAAAAGGATGTTGCTTTGCCTCATGA

mRNA sequence

ATGTCGAATCTATATGGGGATTATAACCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCTGCTGTAGGCAAAACCCAACTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCCGGACAAGAAAGGTTTGTGCCCTTTCTTTTTATTTTCTTTTTGTGGGGTTCATTGGTTTTTGTTTTCTTTCTCATGGAGACCACTTCATTGTTCAAGGGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCATTCGATCACATGGCAAGGTGGCTGGAGGAACTAAGAGGACATGCTGATAAGAACATCGTTATAATGCTCATCGGAAACAAATGCGACTTAGGAAGTCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCGACGAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGGGCTGTTTAAAGGAAATAGTATAATTGTTCCTGGACAGGACCAGGATTCTGGGAGAAAAGGATGTTGCTTTGCCTCATGA

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTATAACCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCTGCTGTAGGCAAAACCCAACTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCCGGACAAGAAAGGTTTGTGCCCTTTCTTTTTATTTTCTTTTTGTGGGGTTCATTGGTTTTTGTTTTCTTTCTCATGGAGACCACTTCATTGTTCAAGGGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCATTCGATCACATGGCAAGGTGGCTGGAGGAACTAAGAGGACATGCTGATAAGAACATCGTTATAATGCTCATCGGAAACAAATGCGACTTAGGAAGTCTCCGAGCGGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCGACGAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGGGCTGTTTAAAGGAAATAGTATAATTGTTCCTGGACAGGACCAGGATTCTGGGAGAAAAGGATGTTGCTTTGCCTCATGA

Protein sequence

MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQDQDSGRKGCCFAS

Homology

[Close]

BLAST of ClCG04G000360 vs. Swiss-Prot
Match: RAA4D_ARATH (Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 5.9e-100
Identity = 192/249 (77.11%), Postives = 199/249 (79.92%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            KTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  NKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMA+WLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+REN
Sbjct: 121 MLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALE+TNVETAF TILTEIYRIISKKSL A ++ D   N  L KG  II+P + 
Sbjct: 181 LFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDD-DADGNSSLLKGTRIIIPSEQ 219

Query: 241 QDSGRKGCC 250
           +   R GCC
Sbjct: 241 ESGKRGGCC 219

[Close]

BLAST of ClCG04G000360 vs. Swiss-Prot
Match: RAA4C_ARATH (Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.9e-91
Identity = 173/252 (68.65%), Postives = 196/252 (77.78%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           +KT+KAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  RKTIKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYD+TKRQSFDH+ARWLEELRGHADKNIVIMLIGNK DLG+LRAVPTEDA+EFA+REN
Sbjct: 121 MLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVPTEDAKEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSAL+S NVE +F T+LTEIYRI+SKK+L A EE + G +  L +G  I+V G++
Sbjct: 181 LFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEEGESGGDSSLLQGTKIVVAGEE 223

Query: 241 QDSGRKGCCFAS 253
            +S  KGCC  S
Sbjct: 241 TESKGKGCCGTS 223

[Close]

BLAST of ClCG04G000360 vs. Swiss-Prot
Match: RLGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2)

HSP 1 Score: 335.5 bits (859), Expect = 5.0e-91
Identity = 175/248 (70.56%), Postives = 190/248 (76.61%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG+  QKIDYVFKVVLIGDSAVGK+QLLARF+RNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  KAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVY 124
           KAQIWDTAGQER                             YRAVTSAYYRGAVGAMLVY
Sbjct: 68  KAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGAMLVY 127

Query: 125 DMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFM 184
           D+TKRQSFDH+ARWLEELRGHADKNIVIMLIGNK DLG+LR VPTEDA+EFAERENLFFM
Sbjct: 128 DITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFM 187

Query: 185 ETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQDQDSG 244
           ETSALESTNVE AF T+LTEIYRI+SKK+L A EE+D   N  L KG  I+VPGQ+    
Sbjct: 188 ETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSLLKGTKIVVPGQEPAPP 226

Query: 245 RKGCCFAS 253
            K  C  S
Sbjct: 248 TKASCCMS 226

[Close]

BLAST of ClCG04G000360 vs. Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-83
Identity = 167/250 (66.80%), Postives = 189/250 (75.60%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD N KIDYVFKVVLIGDSAVGK+Q+LARF+RNEFS+DSK+TIGVEFQT+TLVID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  KAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVY 124
           KAQIWDTAGQER                             YRAVTSAYYRGAVGAMLVY
Sbjct: 67  KAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGAMLVY 126

Query: 125 DMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFM 184
           D+TKRQ+FDH+ RWLEELR HADKNIVI+LIGNKCDL + R VPTEDA+EFAE+E LFF+
Sbjct: 127 DITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFL 186

Query: 185 ETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQDQD-- 244
           ETSALE+TNVE+AF T+LTEIY I++KKSLAA E    G++  L  G  II+PG  Q+  
Sbjct: 187 ETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQGNGNSASL-SGQKIIIPGPAQEIP 226

Query: 245 SGRKGCCFAS 253
           + R  CC AS
Sbjct: 247 AKRNMCCQAS 226

[Close]

BLAST of ClCG04G000360 vs. Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.6e-81
Identity = 161/250 (64.40%), Postives = 186/250 (74.40%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           M++ YGD +QKIDYVFKVVLIGDSAVGKTQ+LARF+RNEFS+DSKATIGVEFQT+TLVI 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            K+VKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  HKSVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYD+TKRQ+FDH+ RWLEELR HAD+NIVIML GNK DL   RAVPTEDA+EFA++E 
Sbjct: 121 MLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEG 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFF+ETSA+E+T +E AF T+LTEI+ I++KK+LAA +E    SNP    G  I+VPG  
Sbjct: 181 LFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAA-DENQSNSNPASLTGKKILVPGPG 220

Query: 241 Q-DSGRKGCC 250
           Q   G+K CC
Sbjct: 241 QVIPGKKACC 220

[Close]

BLAST of ClCG04G000360 vs. TrEMBL
Match: A0A0A0KW90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152280 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 4.6e-115
Identity = 220/252 (87.30%), Postives = 221/252 (87.70%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNP LFKG SI+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPALFKGTSIVVPGQD 223

Query: 241 QDSGRKGCCFAS 253
           QDSGRKGCCFAS
Sbjct: 241 QDSGRKGCCFAS 223

[Close]

BLAST of ClCG04G000360 vs. TrEMBL
Match: V4S363_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005824mg PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 4.9e-101
Identity = 196/253 (77.47%), Postives = 208/253 (82.21%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            KTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  HKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWL+ELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+REN
Sbjct: 121 MLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALE+TNVETAF T+LTEIYRIISKKSL A +E D+  N  L KG  IIVPGQD
Sbjct: 181 LFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQD 224

Query: 241 QDS-GRKGCCFAS 253
           Q+S  ++GCC +S
Sbjct: 241 QNSASKRGCCLSS 224

[Close]

BLAST of ClCG04G000360 vs. TrEMBL
Match: A0A067F1B3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027382mg PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 4.9e-101
Identity = 196/253 (77.47%), Postives = 208/253 (82.21%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            KTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  HKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWL+ELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+REN
Sbjct: 121 MLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALE+TNVETAF T+LTEIYRIISKKSL A +E D+  N  L KG  IIVPGQD
Sbjct: 181 LFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQD 224

Query: 241 QDS-GRKGCCFAS 253
           Q+S  ++GCC +S
Sbjct: 241 QNSASKRGCCLSS 224

[Close]

BLAST of ClCG04G000360 vs. TrEMBL
Match: A0A061EWF7_THECC (RAB GTPase A4D OS=Theobroma cacao GN=TCM_024843 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.2e-99
Identity = 194/249 (77.91%), Postives = 203/249 (81.53%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSN YGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNFYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLAID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            KTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  HKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+REN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALESTNVETAF T+LTEIYRIISKK+LAA +E+D   N GL KG  IIVP Q+
Sbjct: 181 LFFMETSALESTNVETAFLTVLTEIYRIISKKTLAANDELDPNGNSGLLKGTRIIVPNQE 220

Query: 241 QDSGRKGCC 250
             + RKG C
Sbjct: 241 LQTERKGGC 220

[Close]

BLAST of ClCG04G000360 vs. TrEMBL
Match: A0A078CFN9_BRANA (BnaA03g32140D protein OS=Brassica napus GN=BnaA03g32140D PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.3e-98
Identity = 194/249 (77.91%), Postives = 202/249 (81.12%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            KTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  NKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMA+WLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALE+TNVETAF TILTEIYRIISKKSL A ++ D  SN  L KG  II+P + 
Sbjct: 181 LFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDADGNSN--LLKGTRIIIPSEQ 218

Query: 241 QDSGRKGCC 250
           +   R GCC
Sbjct: 241 ESDKRGGCC 218

[Close]

BLAST of ClCG04G000360 vs. TAIR10
Match: AT3G12160.1 (AT3G12160.1 RAB GTPase homolog A4D)

HSP 1 Score: 365.2 bits (936), Expect = 3.3e-101
Identity = 192/249 (77.11%), Postives = 199/249 (79.92%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            KTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  NKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMA+WLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+REN
Sbjct: 121 MLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALE+TNVETAF TILTEIYRIISKKSL A ++ D   N  L KG  II+P + 
Sbjct: 181 LFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDD-DADGNSSLLKGTRIIIPSEQ 219

Query: 241 QDSGRKGCC 250
           +   R GCC
Sbjct: 241 ESGKRGGCC 219

[Close]

BLAST of ClCG04G000360 vs. TAIR10
Match: AT5G47960.1 (AT5G47960.1 RAB GTPase homolog A4C)

HSP 1 Score: 335.9 bits (860), Expect = 2.2e-92
Identity = 173/252 (68.65%), Postives = 196/252 (77.78%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           +KT+KAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  RKTIKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYD+TKRQSFDH+ARWLEELRGHADKNIVIMLIGNK DLG+LRAVPTEDA+EFA+REN
Sbjct: 121 MLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVPTEDAKEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSAL+S NVE +F T+LTEIYRI+SKK+L A EE + G +  L +G  I+V G++
Sbjct: 181 LFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEEGESGGDSSLLQGTKIVVAGEE 223

Query: 241 QDSGRKGCCFAS 253
            +S  KGCC  S
Sbjct: 241 TESKGKGCCGTS 223

[Close]

BLAST of ClCG04G000360 vs. TAIR10
Match: AT5G65270.1 (AT5G65270.1 RAB GTPase homolog A4A)

HSP 1 Score: 297.7 bits (761), Expect = 6.6e-81
Identity = 161/248 (64.92%), Postives = 185/248 (74.60%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD +QKIDYVFKVVLIGDSAVGK+Q+LAR++R+EFS+DSKATIGVEFQT+TLVID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  KAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVY 124
           KAQIWDTAGQER                             YRAVTSAYYRGAVGAMLVY
Sbjct: 67  KAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGAMLVY 126

Query: 125 DMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFM 184
           D+T+RQ+FDH+ RWLEELR HADKNIVI+LIGNK DL   RA+PTEDA+EFAE+E LFF+
Sbjct: 127 DITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFL 186

Query: 185 ETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSI-IVPGQDQDS 244
           ETSA  +TNVE+AF T+LTEI+ I++KKSLAA E+ + G NPG   G  I IVPG  Q  
Sbjct: 187 ETSAFNATNVESAFSTVLTEIFNIVNKKSLAASEDQENG-NPGSLAGKKIDIVPGPGQVI 224

Query: 245 GRKG--CC 250
             K   CC
Sbjct: 247 PNKSNMCC 224

[Close]

BLAST of ClCG04G000360 vs. TAIR10
Match: AT4G39990.1 (AT4G39990.1 RAB GTPase homolog A4B)

HSP 1 Score: 288.5 bits (737), Expect = 4.0e-78
Identity = 152/250 (60.80%), Postives = 183/250 (73.20%), Query Frame = 1


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG  + K+DYVFKVVLIGDSAVGK+QLLARF+R+EFS+DSKATIGVEFQT+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  KAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVY 124
           KAQIWDTAGQER                             YRAVTSAYYRGAVGAMLVY
Sbjct: 67  KAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGAMLVY 126

Query: 125 DMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFM 184
           DMTKR++F+H+ RWLEELR HADKNIVI+LIGNK DL   RAVPTEDA+EFAE+E LFF+
Sbjct: 127 DMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFL 186

Query: 185 ETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQDQDSG 244
           ETSAL +TNVE +F T++T+IY  ++KK+LA+  +    +NPG   G  I++PG  Q+  
Sbjct: 187 ETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD---SNNPGSLAGKKILIPGSGQEIP 224

Query: 245 RK--GCCFAS 253
            K   CC +S
Sbjct: 247 AKTSTCCTSS 224

[Close]

BLAST of ClCG04G000360 vs. TAIR10
Match: AT1G09630.1 (AT1G09630.1 RAB GTPase 11C)

HSP 1 Score: 253.1 bits (645), Expect = 1.9e-67
Identity = 133/244 (54.51%), Postives = 173/244 (70.90%), Query Frame = 1


Query: 9   NQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQI 68
           +++ DY+FKVVLIGDS VGK+ LL+RF+RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6   DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65

Query: 69  WDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGAMLVYDMTK 128
           WDTAGQER                             YRA+TSAYYRGA+GA+LVYD+TK
Sbjct: 66  WDTAGQER-----------------------------YRAITSAYYRGALGALLVYDVTK 125

Query: 129 RQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSA 188
             +F++++RWL+ELR HAD NIVIMLIGNK DL  LRAV TEDAQ +AE+E L F+ETSA
Sbjct: 126 PTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSA 185

Query: 189 LESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQDQDSGRKGC 248
           LE+ NVE AF TIL+E+YRIISKKS+++ +     +N  + +G +I V    + + +K C
Sbjct: 186 LEALNVEKAFQTILSEVYRIISKKSISSDQTT---ANANIKEGQTIDVAATSESNAKKPC 217

Query: 249 CFAS 253
           C +S
Sbjct: 246 CSSS 217

[Close]

BLAST of ClCG04G000360 vs. NCBI nr
Match: gi|449464898|ref|XP_004150166.1| (PREDICTED: ras-related protein RABA4d [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 6.5e-115
Identity = 220/252 (87.30%), Postives = 221/252 (87.70%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNP LFKG SI+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPALFKGTSIVVPGQD 223

Query: 241 QDSGRKGCCFAS 253
           QDSGRKGCCFAS
Sbjct: 241 QDSGRKGCCFAS 223

[Close]

BLAST of ClCG04G000360 vs. NCBI nr
Match: gi|659121765|ref|XP_008460801.1| (PREDICTED: ras-related protein RABA4d [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 7.2e-114
Identity = 218/252 (86.51%), Postives = 220/252 (87.30%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
           QKTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  QKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNP LFKG +I+VPGQD
Sbjct: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPALFKGTNIVVPGQD 223

Query: 241 QDSGRKGCCFAS 253
           QDSG KGCCFAS
Sbjct: 241 QDSGTKGCCFAS 223

[Close]

BLAST of ClCG04G000360 vs. NCBI nr
Match: gi|1009106149|ref|XP_015872112.1| (PREDICTED: ras-related protein RABA4d [Ziziphus jujuba])

HSP 1 Score: 377.9 bits (969), Expect = 1.4e-101
Identity = 201/251 (80.08%), Postives = 208/251 (82.87%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            K VKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  SKIVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+REN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALE+TNVETAF TILTEIYRIISKK+L A ++ID  +  GL KG  IIVPGQ+
Sbjct: 181 LFFMETSALEATNVETAFLTILTEIYRIISKKTLTASDDID-SNGSGLLKGTKIIVPGQE 221

Query: 241 QDS-GRKGCCF 251
           QDS G KGCCF
Sbjct: 241 QDSGGGKGCCF 221

[Close]

BLAST of ClCG04G000360 vs. NCBI nr
Match: gi|567857618|ref|XP_006421492.1| (hypothetical protein CICLE_v10005824mg [Citrus clementina])

HSP 1 Score: 375.6 bits (963), Expect = 7.0e-101
Identity = 196/253 (77.47%), Postives = 208/253 (82.21%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            KTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  HKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWL+ELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+REN
Sbjct: 121 MLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALE+TNVETAF T+LTEIYRIISKKSL A +E D+  N  L KG  IIVPGQD
Sbjct: 181 LFFMETSALEATNVETAFLTVLTEIYRIISKKSLTANDEHDVAGNSNLLKGTRIIVPGQD 224

Query: 241 QDS-GRKGCCFAS 253
           Q+S  ++GCC +S
Sbjct: 241 QNSASKRGCCLSS 224

[Close]

BLAST of ClCG04G000360 vs. NCBI nr
Match: gi|590636715|ref|XP_007028923.1| (RAB GTPase A4D [Theobroma cacao])

HSP 1 Score: 370.9 bits (951), Expect = 1.7e-99
Identity = 194/249 (77.91%), Postives = 203/249 (81.53%), Query Frame = 1


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSN YGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNFYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLAID 60

Query: 61  QKTVKAQIWDTAGQERFVPFLFIFFLWGSLVFVFFLMETTSLFKGYRAVTSAYYRGAVGA 120
            KTVKAQIWDTAGQER                             YRAVTSAYYRGAVGA
Sbjct: 61  HKTVKAQIWDTAGQER-----------------------------YRAVTSAYYRGAVGA 120

Query: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAEREN 180
           MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+REN
Sbjct: 121 MLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQREN 180

Query: 181 LFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPGLFKGNSIIVPGQD 240
           LFFMETSALESTNVETAF T+LTEIYRIISKK+LAA +E+D   N GL KG  IIVP Q+
Sbjct: 181 LFFMETSALESTNVETAFLTVLTEIYRIISKKTLAANDELDPNGNSGLLKGTRIIVPNQE 220

Query: 241 QDSGRKGCC 250
             + RKG C
Sbjct: 241 LQTERKGGC 220

The following BLAST results are available for this feature:

BLAST of ClCG04G000360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA4D_ARATH	5.9e-100	77.11	Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1 SV=1	[more]
RAA4C_ARATH	3.9e-91	68.65	Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2 SV=1	[more]
RLGP1_ORYSJ	5.0e-91	70.56	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2	[more]
RB11A_LOTJA	1.3e-83	66.80	Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1	[more]
RB11C_TOBAC	1.6e-81	64.40	Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1	[more]

BLAST of ClCG04G000360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW90_CUCSA	4.6e-115	87.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152280 PE=4 SV=1	[more]
V4S363_9ROSI	4.9e-101	77.47	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005824mg PE=4 SV=1	[more]
A0A067F1B3_CITSI	4.9e-101	77.47	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027382mg PE=4 SV=1	[more]
A0A061EWF7_THECC	1.2e-99	77.91	RAB GTPase A4D OS=Theobroma cacao GN=TCM_024843 PE=4 SV=1	[more]
A0A078CFN9_BRANA	2.3e-98	77.91	BnaA03g32140D protein OS=Brassica napus GN=BnaA03g32140D PE=4 SV=1	[more]

BLAST of ClCG04G000360 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12160.1	3.3e-101	77.11	RAB GTPase homolog A4D	[more]
AT5G47960.1	2.2e-92	68.65	RAB GTPase homolog A4C	[more]
AT5G65270.1	6.6e-81	64.92	RAB GTPase homolog A4A	[more]
AT4G39990.1	4.0e-78	60.80	RAB GTPase homolog A4B	[more]
AT1G09630.1	1.9e-67	54.51	RAB GTPase 11C	[more]

BLAST of ClCG04G000360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464898\|ref\|XP_004150166.1\|	6.5e-115	87.30	PREDICTED: ras-related protein RABA4d [Cucumis sativus]	[more]
gi\|659121765\|ref\|XP_008460801.1\|	7.2e-114	86.51	PREDICTED: ras-related protein RABA4d [Cucumis melo]	[more]
gi\|1009106149\|ref\|XP_015872112.1\|	1.4e-101	80.08	PREDICTED: ras-related protein RABA4d [Ziziphus jujuba]	[more]
gi\|567857618\|ref\|XP_006421492.1\|	7.0e-101	77.47	hypothetical protein CICLE_v10005824mg [Citrus clementina]	[more]
gi\|590636715\|ref\|XP_007028923.1\|	1.7e-99	77.91	RAB GTPase A4D [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0015031	protein transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009827	plant-type cell wall modification
biological_process	GO:0080092	regulation of pollen tube growth
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005768	endosome
cellular_component	GO:0016020	membrane
cellular_component	GO:0090404	pollen tube tip
cellular_component	GO:0070382	exocytic vesicle
cellular_component	GO:0045177	apical part of cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019900	kinase binding
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG04G000360.1	ClCG04G000360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 17..95 score: 1.9E-23coord: 106..206 score: 3.1
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 15..77 score: 7.9E-16coord: 106..200 score: 1.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 9..231 score: 2.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 106..211 score: 1.68E-55coord: 11..76 score: 1.68
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 16..37 score: 1.3E-32coord: 183..205 score: 1.3E-32coord: 39..55 score: 1.3E-32coord: 57..79 score: 1.3
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 107..251 score: 1.7E-161coord: 8..77 score: 1.7E
None	No IPR available	PANTHER	PTHR24073:SF578	RAS-RELATED PROTEIN RABA4D	coord: 107..251 score: 1.7E-161coord: 8..77 score: 1.7E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..208 score: 1.3
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 18..204 score: 1.
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..208 score: 1.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..244 score: 0.
None	No IPR available	PROFILE	PS51419	RAB	coord: 11..249 score: 33

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG04G000360	Csa4G152280	Cucumber (Chinese Long) v2	cuwcgB305
ClCG04G000360	MELO3C023181	Melon (DHL92) v3.5.1	mewcgB526
ClCG04G000360	Cla000742	Watermelon (97103) v1	wcgwmB260
ClCG04G000360	Cla97C04G068730	Watermelon (97103) v2	wcgwmbB200
ClCG04G000360	Bhi03G002125	Wax gourd	wcgwgoB395
ClCG04G000360	CSPI04G10370	Wild cucumber (PI 183967)	cpiwcgB320
ClCG04G000360	Cucsa.038030	Cucumber (Gy14) v1	cgywcgB013
ClCG04G000360	CmaCh03G000800	Cucurbita maxima (Rimu)	cmawcgB586
ClCG04G000360	CmoCh03G000810	Cucurbita moschata (Rifu)	cmowcgB585
ClCG04G000360	Lsi01G018930	Bottle gourd (USVL1VR-Ls)	lsiwcgB135
ClCG04G000360	Cp4.1LG10g11790	Cucurbita pepo (Zucchini)	cpewcgB079
ClCG04G000360	CsGy4G010060	Cucumber (Gy14) v2	cgybwcgB286
ClCG04G000360	MELO3C023181.2	Melon (DHL92) v3.6.1	medwcgB530
ClCG04G000360	Carg22467	Silver-seed gourd	carwcgB0184
ClCG04G000360	CsaV3_4G010530	Cucumber (Chinese Long) v3	cucwcgB322

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG04G000360	Silver-seed gourd	carwcgB0276
ClCG04G000360	Wax gourd	wcgwgoB387
ClCG04G000360	Cucurbita maxima (Rimu)	cmawcgB770
ClCG04G000360	Cucurbita moschata (Rifu)	cmowcgB771
ClCG04G000360	Cucumber (Chinese Long) v2	cuwcgB303
ClCG04G000360	Cucurbita pepo (Zucchini)	cpewcgB434