CsGy4G010060 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G010060
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Ras-related protein rab-11.1
Location	Chr4 : 8542647 .. 8547190 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTGGATGAACGGCGGAGATTGACAAATGACAACGAATTTGGTAAATACAATTGAATTTGAAGTCTAATTTTACACGGTAAAGGCCACAAAACCGTTGGTGCGACCCCACAATGGCCGTTGTTCCATTTCCACTTCTCGCTCTCTTTTCCATCTCTCTTCTTCTTCCTTCATTCTCTTCATTTTCCAGCTTCCAAAATCCACACACTATTCTCTCAAATTTTCCCTTCAAACCCCAGCTCTGATTTTCAATTCCCCTCCCAACTATTTTGCCCACATTTCTCTTTTTACGCTCGATTTTATTTTGAGGCATTTGGGCAATTTGGTTTGAGTTGTGATGTTGTTATCCGTCTAATCTGCGTGTTTTAGAGGTGGGGTTTGTGGGATTTTTGAGAGAAAGATAATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCTGTCGGCAAAACCCAGCTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTCATTGATCAAAAAACAGTGAAAGCCCAGATATGGGATACTGCAGGACAAGAAAGGTTTGTGCCCCTTTTTTTTTTTCTTTTGTGGGGTTCATTGGTTTTTTAGACTACTTCATTGTTCAAGGAGTTTGGATCTGTGTAAGCTTTTGAAATTCGTAAAATCCAAACGAGCTTTTGAGCTTTTGTAATAATTAATAGGTTGTATATTTTGAATGAATGTATGATACAAGATAGAGTTTGACAACAAGGAGTTTGGAATCCTCCAATAGAATGTCAGTAATGGAAGGAATGTCAGTAATGGTGAAAAACCAAGCCTTAGGAGGATATCATCTGAAGATGTGAAACATGGTGTTTGAAAATGATGTCTGGTTGAAATTGTTTTTCACTCACTTTTTAATTGTCCCTAGGTAGATTTCCTCTTCGGCTTATGTTGATGATATTAGGTTTTGCTGTTTTTATCATATATAACTGCAGCTTTGCTGCAATATTATGCTGTTTCAGATTAAATAAAATTATTGTGATAGGACTAGTAGGCCATGTGTTTGTTTTACATATGCTCAAAAGAGAAATGAGAGAACGAATTTCTAGAAGAAAGCTAATGTGAAGGTGAAAGGGTGCGAGTTATGTCTGATGGAAATAGTTTGGAGTTTGGTGTACTGTGGCCCATCAATGGAAATGCATATAAAACGGGAGAAAAGTAAAGCATAAATGTGAGATAAAGAAGATGAAAGAAGATGGGAGAGTTGTGAAAAAACTGCACGAAGTCACAACGGGGAGTTGGAGGCACCTCTCTAGATAGCAACATTTATGGTTTGGTTCTTGCTAAGTGAAAGGGAGTGAACGACTCTAAAAGAAAAGGGAAGAGAACGATTGGTGAGGAATAAAGCATTCTTGATAAAGGGAAGGTGATCGTTGAACAATTTAATGGGGAGATTAGTAAGACGGGGAAGAGGAAGACAAGCAGCACTGACAAGAAGTCTAAAGCTGGCTCAGTTTTATGGAGTTGTTCCAGATGGATGGATGAATCCTCCAAGCATAAGGTTATGTCAAGGTTATTCAGCAAATAGATGCAAGTTCCGGTGATTAGTATGATGAGATGTTTGATGGGGAGTCATCAGAAACGCCTCAAATTTAAGGGAGAGACATGAATAAATTGAAATCACATCTAAATGAGAGGGATTCTAAGGATATGAAAGACAGTTAAAAAAGGCTAAAACGAATTGAAAGTTACTACCTATACCAATGAAGGCACCTTTCCTTCTGGTGGCTCATTCATAAGAACTCTAAAGTTAAGCATTATTAGTTTAGAGCAATCCTCTGTTGGGTGAGCTTCTAGGGATTTTCATAGGAAGTATTTGAGTGAGGACAAAGTATGTTGAAAGAACTTATATTGGTTTATGGCATAAGCTTTACTCTTAGAATCAGTAGAATGCTAAAAGAATGTTAGATACCTATATTAGTATAGGATTAGGGGTATAAGGGTAGTTAGATATTTAGGAAGTTACTAGTAGTTATTGTGTAAGTGTGGTGTGGTGTGGTTACATGTAGTTATTATGTAATTGTGGTTACTAGGGTGGTTACATCTTGTTATAAATGGAGGGAGGGTAAGTGAGAGGGGGGAATTGGGTGGAGTGATCTAGGGCTTGGGTGAGAGTACACAAGAGGGAGGTTCCAAGTGCCTTATACTTGGGTTTATCTTGTATTTTCTTATAGTTACATTATAATAAATTCAGAGCTTGTTCTTGTTAGGAAGTATCCTAACAAATAACTCATGTTGGCTTATAGGATAGTCTTCACTCGTAGAAGCAATTCAGGATAGGGATGACTCTGTCCAGTGGCAGAGGATGCTAGGGAATGTTGGGATCATCAAGTGTCGAATCCGGATTCTGAATATTAGGTCATCTTGTGTAGGTATAGGAAGATGTTGGATATTCTGACTGATGCTGAGTTGCACCAGTGCAGAAAGTAGGCTATATGTGTCCAGTGTGAGCTCTATCGATAGTTGGTGTACAACCTTCTGTCATCGGGGACCAAACTCTAACAAAAGTATAATGCTGCATTCTTTGGATGCTATTAAGTTTCAGCTCATCTGGGACCAGAAAATTATGAAGGCAGTCCCGAGTTGGTGACAAGGGCTGATAGTCTTAATTTTTAGAATAGGGGCATGACTTTCTAACTCAAGTCTAAACAATTTTTTATGTCATTGCTGCCCCATCCCTCTACTAATGAACCCCTGTTATCAAACCCCTAAGCAACAACTAAGGGTGCATTTGGTAAGTGATCTGGAAACAAGACACTCAATGATTAACAAAGTTGTATTTCTATTTTTCAATGTTTTTAAATATGCAATTAGTACTAGATTTAGAAACTATATCTCAATTTCAAACGTTGTTGAAAGTGGGTTTGGTAATATAGTTATAAATAGAAGAATTAATAGGTCATAAATTCGTCTCTTGTATTCTAAGAAGAAGATGAAGGATAGAGTAACCATTGAAAGGCTAATCATAAAGAGTGTGAGTTATGAAGGGCTTAGCTAGTTAGGAGTATCGGGATCAGGTGCACTTTTTGCAGTTTCGTTATCACTAGATTGGAACACAAATGTATGGGGAGTGAGAAAGGCATAATTTGAGTGAAGGGAAAGGGAAGAGTTGTGGGAAAGCTGAGGGAAGCTGAAGAAAAGTTTTTGTTTTGCATGAAGAAACTGAGGTAAAATTATGATCCATTTATCAACTTTTTTCTGGCTTTGATGCATATAATCCCTTAAGTCAGATTTGAGAACGACAAGTGATGATATCTTGAATCCAATCAATAATCTGTATTCATTACTTTTTTGTATTTCTTCACAATAGATGTAACATTGATGAAATTTTTGCATTATCTCTCAAACAAAATATTGTATGTTTTAAGTATATCTACTCTTAAATTCATAATTAAACAGCCTCGTTGTTGTATAGTTGTCTGGCATGAGACAAGTTTGACTTTTAGAATGCTAGGAGCCCATGCCCTGTGGTATCAACAAGTTAGGATTTGTATTATATTGTAATATTTTCCATTTGGTTGCTGATATCAAAACCAACTTGTGAGTTGCTGATATCGAAACCAATTTATGAGTTTTTGATATCAAAATTGAGTTATAAGTATTATGTTTTCCGTACGTCATTTGGTGTTTGTGTCTGCTATTACGCTAAAAAAGTTCCCATTTTGACTTGATCAGGTTCTTGTTTGAATTGTTATTGGATCCAACATCGTTATCTGATAAAACAGCACACGTAAATTTGACATTTTTATGTACTTGCTTTGTGAATATTGCTGTTAAGTTGACTATAGTTTCTAAAAATATGCCCTTTTCCGCATTGCCAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCGTTCGACCACATGGCAAGGTGGCTGGAGGAACTTAGAGGGCACGCTGATAAGAACATCGTTATAATGCTCATTGGAAACAAGTGCGATTTAGGAAGTCTCCGAGCAGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCCACAAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGCCCTGTTTAAAGGGACTAGTATAGTTGTTCCTGGACAAGACCAGGATTCTGGGAGAAAAGGTTGTTGCTTCGCGTCATGAATTTCACATAATTCCATAATCATTTCGGTTGTGACATTGTTTTTTAATTCCAATTGGATTTATACTAAGAAAAAAATTCATGTATTAGTAATTTGTAGAGTGACTGGCTTGATACCATGGATGAAGGATTAGTTAAGCTATGATCTCTTTCTCTCTCTCCCTCTCTT

mRNA sequence

AGTTGGATGAACGGCGGAGATTGACAAATGACAACGAATTTGGTAAATACAATTGAATTTGAAGTCTAATTTTACACGGTAAAGGCCACAAAACCGTTGGTGCGACCCCACAATGGCCGTTGTTCCATTTCCACTTCTCGCTCTCTTTTCCATCTCTCTTCTTCTTCCTTCATTCTCTTCATTTTCCAGCTTCCAAAATCCACACACTATTCTCTCAAATTTTCCCTTCAAACCCCAGCTCTGATTTTCAATTCCCCTCCCAACTATTTTGCCCACATTTCTCTTTTTACGCTCGATTTTATTTTGAGGCATTTGGGCAATTTGGTTTGAGTTGTGATGTTGTTATCCGTCTAATCTGCGTGTTTTAGAGGTGGGGTTTGTGGGATTTTTGAGAGAAAGATAATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCTGTCGGCAAAACCCAGCTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTCATTGATCAAAAAACAGTGAAAGCCCAGATATGGGATACTGCAGGACAAGAAAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCGTTCGACCACATGGCAAGGTGGCTGGAGGAACTTAGAGGGCACGCTGATAAGAACATCGTTATAATGCTCATTGGAAACAAGTGCGATTTAGGAAGTCTCCGAGCAGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCCACAAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGCCCTGTTTAAAGGGACTAGTATAGTTGTTCCTGGACAAGACCAGGATTCTGGGAGAAAAGGTTGTTGCTTCGCGTCATGAATTTCACATAATTCCATAATCATTTCGGTTGTGACATTGTTTTTTAATTCCAATTGGATTTATACTAAGAAAAAAATTCATGTATTAGTAATTTGTAGAGTGACTGGCTTGATACCATGGATGAAGGATTAGTTAAGCTATGATCTCTTTCTCTCTCTCCCTCTCTT

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCTGTCGGCAAAACCCAGCTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTCATTGATCAAAAAACAGTGAAAGCCCAGATATGGGATACTGCAGGACAAGAAAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCGTTCGACCACATGGCAAGGTGGCTGGAGGAACTTAGAGGGCACGCTGATAAGAACATCGTTATAATGCTCATTGGAAACAAGTGCGATTTAGGAAGTCTCCGAGCAGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCCACAAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGCCCTGTTTAAAGGGACTAGTATAGTTGTTCCTGGACAAGACCAGGATTCTGGGAGAAAAGGTTGTTGCTTCGCGTCATGA

Protein sequence

MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS

Homology

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BLAST of CsGy4G010060 vs. NCBI nr
Match: XP_004150166.1 (PREDICTED: ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical protein Csa_4G152280 [Cucumis sativus])

HSP 1 Score: 441.8 bits (1135), Expect = 1.4e-120
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

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BLAST of CsGy4G010060 vs. NCBI nr
Match: XP_008460801.1 (PREDICTED: ras-related protein RABA4d [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 1.5e-119
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIGSNPALFKGT+IVVPGQDQDSG KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

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BLAST of CsGy4G010060 vs. NCBI nr
Match: XP_022925137.1 (ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related protein RABA4d [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428.3 bits (1100), Expect = 1.6e-116
Identity = 216/223 (96.86%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGT+IVVPGQDQ  GRKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 223

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BLAST of CsGy4G010060 vs. NCBI nr
Match: XP_022966454.1 (ras-related protein RABA4d [Cucurbita maxima])

HSP 1 Score: 426.8 bits (1096), Expect = 4.6e-116
Identity = 215/223 (96.41%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGT+IVVPGQ+Q  GRKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 223

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BLAST of CsGy4G010060 vs. NCBI nr
Match: XP_022151622.1 (ras-related protein RABA4d-like [Momordica charantia])

HSP 1 Score: 423.7 bits (1088), Expect = 3.9e-115
Identity = 215/223 (96.41%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKK+LAAGEEIDIG  P  FKGT+IVVPGQD DSGRKGCCFAS
Sbjct: 181 SKKTLAAGEEIDIG-GPGHFKGTNIVVPGQDSDSGRKGCCFAS 222

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BLAST of CsGy4G010060 vs. TAIR10
Match: AT3G12160.1 (RAB GTPase homolog A4D)

HSP 1 Score: 382.9 bits (982), Expect = 1.4e-106
Identity = 192/220 (87.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCC 221
           SKKSL A ++ D   N +L KGT I++P + +   R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

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BLAST of CsGy4G010060 vs. TAIR10
Match: AT5G47960.1 (RAB GTPase homolog A4C)

HSP 1 Score: 354.4 bits (908), Expect = 5.2e-98
Identity = 175/223 (78.48%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKK+L A EE + G + +L +GT IVV G++ +S  KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

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BLAST of CsGy4G010060 vs. TAIR10
Match: AT5G65270.1 (RAB GTPase homolog A4A)

HSP 1 Score: 310.1 bits (793), Expect = 1.1e-84
Identity = 159/219 (72.60%), Postives = 186/219 (84.93%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD +QKIDYVFKVVLIGDSAVGK+Q+LAR++R+EFS+DSKATIGVEFQT+TLVID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DL   RA+PTEDA+EFAE+E LFF+ETSA  +TNVE+AF T+LTEI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186

Query: 185 LAAGEEIDIGSNPALFKGTSI-VVPGQDQDSGRKG--CC 221
           LAA E+ + G NP    G  I +VPG  Q    K   CC
Sbjct: 187 LAASEDQENG-NPGSLAGKKIDIVPGPGQVIPNKSNMCC 224

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BLAST of CsGy4G010060 vs. TAIR10
Match: AT4G39990.1 (RAB GTPase homolog A4B)

HSP 1 Score: 301.2 bits (770), Expect = 5.2e-82
Identity = 151/221 (68.33%), Postives = 184/221 (83.26%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG  + K+DYVFKVVLIGDSAVGK+QLLARF+R+EFS+DSKATIGVEFQT+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DL   RAVPTEDA+EFAE+E LFF+ETSAL +TNVE +F T++T+IY  ++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186

Query: 185 LAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRK--GCCFAS 224
           LA+  +    +NP    G  I++PG  Q+   K   CC +S
Sbjct: 187 LASEGD---SNNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of CsGy4G010060 vs. TAIR10
Match: AT1G09630.1 (RAB GTPase 11C)

HSP 1 Score: 267.7 bits (683), Expect = 6.4e-72
Identity = 133/215 (61.86%), Postives = 175/215 (81.40%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQI 68
           +++ DY+FKVVLIGDS VGK+ LL+RF+RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6   DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK  +F++++RWL+ELR HAD NIVIMLIGN
Sbjct: 66  WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125

Query: 129 KCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAG 188
           K DL  LRAV TEDAQ +AE+E L F+ETSALE+ NVE AF TIL+E+YRIISKKS+++ 
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSD 185

Query: 189 EEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           +     +N  + +G +I V    + + +K CC +S
Sbjct: 186 QTT---ANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of CsGy4G010060 vs. Swiss-Prot
Match: sp|Q9LH50|RAA4D_ARATH (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.5e-105
Identity = 192/220 (87.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCC 221
           SKKSL A ++ D   N +L KGT I++P + +   R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of CsGy4G010060 vs. Swiss-Prot
Match: sp|Q9FE79|RAA4C_ARATH (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 9.4e-97
Identity = 175/223 (78.48%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKK+L A EE + G + +L +GT IVV G++ +S  KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

[Close]

BLAST of CsGy4G010060 vs. Swiss-Prot
Match: sp|P25766|RLGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 354.0 bits (907), Expect = 1.2e-96
Identity = 177/219 (80.82%), Postives = 194/219 (88.58%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG+  QKIDYVFKVVLIGDSAVGK+QLLARF+RNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIM
Sbjct: 68  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DLG+LR VPTEDA+EFAERENLFFMETSALESTNVE AF T+LTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187

Query: 185 LAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           L A EE+D   N +L KGT IVVPGQ+     K  C  S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

[Close]

BLAST of CsGy4G010060 vs. Swiss-Prot
Match: sp|Q40191|RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.1e-88
Identity = 167/221 (75.57%), Postives = 190/221 (85.97%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD N KIDYVFKVVLIGDSAVGK+Q+LARF+RNEFS+DSK+TIGVEFQT+TLVID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNKCDL + R VPTEDA+EFAE+E LFF+ETSALE+TNVE+AF T+LTEIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186

Query: 185 LAAGEEIDIGSNPALFKGTSIVVPGQDQD--SGRKGCCFAS 224
           LAA E    G N A   G  I++PG  Q+  + R  CC AS
Sbjct: 187 LAADESQGNG-NSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226

[Close]

BLAST of CsGy4G010060 vs. Swiss-Prot
Match: sp|Q40520|RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.0e-86
Identity = 162/221 (73.30%), Postives = 189/221 (85.52%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           M++ YGD +QKIDYVFKVVLIGDSAVGKTQ+LARF+RNEFS+DSKATIGVEFQT+TLVI 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIML GNK DL   RAVPTEDA+EFA++E LFF+ETSA+E+T +E AF T+LTEI+ I+
Sbjct: 121 IVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIV 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQ-DSGRKGCC 221
           +KK+LAA +E    SNPA   G  I+VPG  Q   G+K CC
Sbjct: 181 NKKNLAA-DENQSNSNPASLTGKKILVPGPGQVIPGKKACC 220

[Close]

BLAST of CsGy4G010060 vs. TrEMBL
Match: tr|A0A0A0KW90|A0A0A0KW90_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 9.1e-121
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

[Close]

BLAST of CsGy4G010060 vs. TrEMBL
Match: tr|A0A1S3CDP9|A0A1S3CDP9_CUCME (ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.0e-119
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIGSNPALFKGT+IVVPGQDQDSG KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

[Close]

BLAST of CsGy4G010060 vs. TrEMBL
Match: tr|A0A2P5CAT0|A0A2P5CAT0_PARAD (Small GTP-binding domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_169010 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.8e-106
Identity = 196/223 (87.89%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDY+QKIDYVFKVVLIGDSAVGKTQLLARF+RNEFS+DSKATIGVEFQTKTL+ID
Sbjct: 1   MSNLYGDYSQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSIDSKATIGVEFQTKTLIID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRA+PTEDAQEFA+RENLFFMETSALESTNVETAFFTILTEIY II
Sbjct: 121 IVIMLIGNKCDLGSLRAIPTEDAQEFAQRENLFFMETSALESTNVETAFFTILTEIYGII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKK+L A +E+D   N  L KGT I VP Q ++S RKGCC +S
Sbjct: 181 SKKTLTASDEVDSSGNSGLLKGTKIFVPSQ-EESARKGCCLSS 222

[Close]

BLAST of CsGy4G010060 vs. TrEMBL
Match: tr|V4S363|V4S363_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005824mg PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 8.2e-106
Identity = 196/224 (87.50%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF T+LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDS-GRKGCCFAS 224
           SKKSL A +E D+  N  L KGT I+VPGQDQ+S  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

[Close]

BLAST of CsGy4G010060 vs. TrEMBL
Match: tr|A0A067F1B3|A0A067F1B3_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027382mg PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 8.2e-106
Identity = 196/224 (87.50%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF T+LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDS-GRKGCCFAS 224
           SKKSL A +E D+  N  L KGT I+VPGQDQ+S  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

The following BLAST results are available for this feature:

BLAST of CsGy4G010060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150166.1	1.4e-120	100.00	PREDICTED: ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical...	[more]
XP_008460801.1	1.5e-119	99.10	PREDICTED: ras-related protein RABA4d [Cucumis melo]	[more]
XP_022925137.1	1.6e-116	96.86	ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related prot...	[more]
XP_022966454.1	4.6e-116	96.41	ras-related protein RABA4d [Cucurbita maxima]	[more]
XP_022151622.1	3.9e-115	96.41	ras-related protein RABA4d-like [Momordica charantia]	[more]

BLAST of CsGy4G010060 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12160.1	1.4e-106	87.27	RAB GTPase homolog A4D	[more]
AT5G47960.1	5.2e-98	78.48	RAB GTPase homolog A4C	[more]
AT5G65270.1	1.1e-84	72.60	RAB GTPase homolog A4A	[more]
AT4G39990.1	5.2e-82	68.33	RAB GTPase homolog A4B	[more]
AT1G09630.1	6.4e-72	61.86	RAB GTPase 11C	[more]

BLAST of CsGy4G010060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LH50\|RAA4D_ARATH	2.5e-105	87.27	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
sp\|Q9FE79\|RAA4C_ARATH	9.4e-97	78.48	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
sp\|P25766\|RLGP1_ORYSJ	1.2e-96	80.82	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
sp\|Q40191\|RB11A_LOTJA	2.1e-88	75.57	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
sp\|Q40520\|RB11C_TOBAC	2.0e-86	73.30	Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1	[more]

BLAST of CsGy4G010060 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KW90\|A0A0A0KW90_CUCSA	9.1e-121	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1	[more]
tr\|A0A1S3CDP9\|A0A1S3CDP9_CUCME	1.0e-119	99.10	ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1	[more]
tr\|A0A2P5CAT0\|A0A2P5CAT0_PARAD	4.8e-106	87.89	Small GTP-binding domain containing protein OS=Parasponia andersonii OX=3476 GN=...	[more]
tr\|V4S363\|V4S363_9ROSI	8.2e-106	87.50	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005824mg PE=4 ...	[more]
tr\|A0A067F1B3\|A0A067F1B3_CITSI	8.2e-106	87.50	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027382mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G010060.1	CsGy4G010060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 154..176 score: 43.15 coord: 16..37 score: 50.9 coord: 39..55 score: 34.43 coord: 119..132 score: 52.08 coord: 57..79 score: 53.74
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..215 e-value: 5.6E-6 score: 35.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 e-value: 3.5E-26 score: 103.0
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.0015 score: 5.3
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 18..175 e-value: 2.6E-11 score: 25.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 e-value: 1.7E-105 score: 366.5
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 13..194 e-value: 1.4E-66 score: 225.4
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 2..221
None	No IPR available	PANTHER	PTHR24073:SF863	RAS-RELATED PROTEIN RABA4D	coord: 2..221
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..220 score: 35.892
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..177 e-value: 5.07342E-123 score: 348.01
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..171 e-value: 2.0E-36 score: 123.2
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 17..177 e-value: 2.1E-61 score: 206.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..182

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G010060	Csa4G152280	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G010060	MELO3C023181	Melon (DHL92) v3.5.1	cgybmeB287
CsGy4G010060	ClCG04G000360	Watermelon (Charleston Gray)	cgybwcgB286
CsGy4G010060	CSPI04G10370	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G010060	CmaCh03G000800	Cucurbita maxima (Rimu)	cgybcmaB538
CsGy4G010060	CmoCh03G000810	Cucurbita moschata (Rifu)	cgybcmoB513
CsGy4G010060	Lsi01G018930	Bottle gourd (USVL1VR-Ls)	cgyblsiB245
CsGy4G010060	Cp4.1LG10g11790	Cucurbita pepo (Zucchini)	cgybcpeB467
CsGy4G010060	MELO3C023181.2	Melon (DHL92) v3.6.1	cgybmedB281
CsGy4G010060	CsaV3_4G010530	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G010060	Cla97C04G068730	Watermelon (97103) v2	cgybwmbB286
CsGy4G010060	Bhi03G002125	Wax gourd	cgybwgoB376
CsGy4G010060	Carg22467	Silver-seed gourd	carcgybB0207

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None