CmoCh03G000810 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G000810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RAC-like GTP binding protein 5
Location	Cmo_Chr03 : 1223060 .. 1226596 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTCTCGCTCTCTTTTCAATCTCTCTTCTTCCTCCCCTTCATCTTCTTCAATCCCAGCATTCCAACCTCCACTCACTATTCTCTGAAATTCCCTTCAAACCCCACCTCTCATTTCAATTCCCCTCCCAACTATTTTGCCCTAATTTCTCTTCTGGGTCCAATTCCAGGGAGATGATCGATTATTCAGCTTCCCTTCCCTTACTTGTAACGATCGGGAAATGGGCAATTTGGTTGGGGTTATAGTGTTGTTATGCGTGTAATCTGCGCGTTTTCGAAGTGGGGTTTGTGGGAATTTGGAGAGGAAGAGAATGTCGAATCTATATGGGGATTTTAACCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTGCTCGATTTTCACGGGATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTTGTTATTGATCAGAAAACAGTGAAGGCCCAGATATGGGATACTGCTGGACAAGAACGGTAAGTGCCCCTTGATTCTTTTGGGTTTCTTTCTTGTGGAAACTACTTCATTGTTCAATGTTTGGATCTGTAAAATGCATATATGTTCTTGAGCTTTGTCGTAATTGTTAGGTTGAATAAAATGAATGATTGTATGATAGAAGATAGAGTCAGTGTTGTGTTGAGTGTTGTGTTGAGGATGGTTGGGAGAGAGTCCGTGAATCCTGGGTTTAGAAGTAAGGAATACATCTCCATTGATACGAGAATTTTTCGGGAAGCCCAAAGCAAAGCCACGAGAGCTTATGCTAGATTCGTGATTCCTAACATGGTATCAGAGTCATGCCCTTAAATTAGCAATGTCAATAGAATCCTTAAATGTTGAAGTGTAGTCAAAAGTGACTCAAGTGTTGAATAAAGGGTGTACTTTGTTCGAGGACTCTAGAGATGGAGTCGAACCTCAATTAAGGAGAGCCTGTTTGAGGGCTTCATAGGCCTCGAGGGAGGCCCTATAGTGTACTTTGTTCAAGGGGAGGACGGTTGGGAGAGAGTCCCACATTAGTAAAGAATACATCTCCATTGGTATAAGGCCTTTTGGGGAACCACAAGAGCTTATGCTCAAAGTGGACAGTATCATACTATTACGGAGATTCGTGATTCCCAACGGTTAGACCACAACGAGCTCGGAAGCCTCAAATAGAGTTATGACTTGTATGGTTGTTGTTTAATCTGTATTCCAAAGAGAATGTAGATATCTATTTGTCTACCAAGTCTTAGGTGGATATCATCTGAAGAAGTGAAACGTGGGTGTGTTAGATAATGATGTCTAGTTGAAGTTATTTCCTCTTCTGCTTACATCTTTCATATTGGGTTGCCGTTTATATTGTATTTAGCTGTAGCTGTTTCAGATTAAATGAAACTTCTCTGATAGGATTGGTGAGCCATAGGTTCATTTTATGTTTGCTCTGAAAAGACACGAGAGAAGGAGTTGCTAGAAGCAATCTAATGTGAAGGTGAAGGGTGTGTTATGTGGGACTCGGGTAGTTCGGAGTAGTGTGGCCATCGTATGGGAATGCATATAAAAGGGGAGAGAGGTTAGCATATGTGTGAGTCCCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGAGTGTGGAAACTTCTCCCTAACAGATGCGTGTTAAAAACTTTGAAGTGAAGGCCGAGAAGAAAAGTTCAAAGAGAACAATATCTAGTAGCGGTGGGGTTAGGTTAGCATAGATGGGACATTACTTCTAAGACTGGGGACATGGTTTTCTTACTCTAGCCTAAACGCACTAAACAATTCCTCTTTAGGCTTTCCCTTTCGAGCTTCCCTTCAAGGTTTTTAAAACGTGTCTGCTACGGAGAGGTTTCCACACCCTTATAAGGAATGCTTCGTTCCCTTTTCCATCCGATGTGGGATCTCACAATCCACCCCCTTTCGATGCCCAGCATCCTCGCCAGCACTCGTTCTTCTCTCAAATCAATGTGGGATCTCATAATCCACCCCCTTTGGTGCCCAGCCTCCTCGCTAGCACTCGTTTCTCTCTCAATTTGATGTGGGATCTCACAATCTACTCTCCTTCGAGGTCTAGTGTCCTTGCTGGCACACCATCTGGTGTCTGGCTCTGATACCATTTGTAACAGCCAAGCTCACCGCTAGCCGATATTGTCCTCTTTAGCCTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGCATCTACTACGGAAAGGTTTCCACACCCTTATAAGGAATGCTTCGTTCCCCTCTCCATCCGACGTGGGATCTCACAATCCACCCCCCTTCAATGCCCAACGTCCTCGCTAGCACTCGTTCCTCTCTCAAATCGATGTGGGATCTCACAATCCACCCCCCTTTGGTACCCAACGTCCTCGCTAGCACTCGTTCCTCTCTCAAATCAATGTGGGATCTCACAATCCACTCTCCTTCGAGGCCCAGTGTCCTCGCTGGCACACCATACGTTGTCTGGCTCTAATACCATTTGTAACAGCCAAGCTCACCGCTAGCCGATATTGTCCTCTTCGGGCTTTTCCTTTTGGGCTTCCCCTCAAGGTCTTTAAAACACGTCTGCTAGAGAGATGTTTCCACACCCTTATAAAGAATGTTTCGTTCCCGTTCCCCTCTCCAACCGATGTGAGATCTCACAACTTTACTTGTAACAAATCCCTGCTATCAAAATTCCTTAGCTAATTACTAAAGGTACATTTGGCAAGCGATCTGAAAACATGAAACTCAATGAAAAACAGAGTTCGATATTTGGATTTTATGGTATCAACAATTCAGAGTTTTCCTTTAATCCCAGAGCTCGATGTTGATATGTCGTTAAGTCGTGAATGTTGCTGTTAAATTGGTTATAGTTCCTGAAGCCATCTCATTTTTTCGCTTGCCAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTGGTTTACGATATGACGAAGCGCCAGTCGTTCGATCACATGTCCCGGTGGCTGGAAGAACTAAGAGGACATGCCGATAAGAACATCGTTATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCAGAGCAGTGCCAACAGAAGATGCACAAGAATTTGCAGAAAGAGAGAACCTGTTCTTCATGGAGACATCAGCGCTCGAGTCGACAAACGTCGAGACTGCGTTCTTCACAATTCTAAAAGAGATTTATAGGATAATCAGCAAGAAGAGCCTTGCAGCTGGGGAAGCAATAGATATTAGTGGGAATGCGGCGCTGTTTAAAGGAACTAATATTATTGTTCCTGGACAAGACCAAGATTCTGTGAAAAAAGGGTGTTGTTTTGCTTCGTGAACTTCACATGATTCCATAATCATTTGAGTTGGGACATTGTTTTTCTATTCCACTTTGATTTATACTAAGAAAAATGAATTCAATGTATTACTAATTTGTATAGAGACCGGCTTGATACCCCCATGGATCTCTCTCTCGC

mRNA sequence

ACTTCTCGCTCTCTTTTCAATCTCTCTTCTTCCTCCCCTTCATCTTCTTCAATCCCAGCATTCCAACCTCCACTCACTATTCTCTGAAATTCCCTTCAAACCCCACCTCTCATTTCAATTCCCCTCCCAACTATTTTGCCCTAATTTCTCTTCTGGGTCCAATTCCAGGGAGATGATCGATTATTCAGCTTCCCTTCCCTTACTTGTAACGATCGGGAAATGGGCAATTTGGTTGGGGTTATAGTGTTGTTATGCGTGTAATCTGCGCGTTTTCGAAGTGGGGTTTGTGGGAATTTGGAGAGGAAGAGAATGTCGAATCTATATGGGGATTTTAACCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTGCTCGATTTTCACGGGATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTTGTTATTGATCAGAAAACAGTGAAGGCCCAGATATGGGATACTGCTGGACAAGAACGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTGGTTTACGATATGACGAAGCGCCAGTCGTTCGATCACATGTCCCGGTGGCTGGAAGAACTAAGAGGACATGCCGATAAGAACATCGTTATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCAGAGCAGTGCCAACAGAAGATGCACAAGAATTTGCAGAAAGAGAGAACCTGTTCTTCATGGAGACATCAGCGCTCGAGTCGACAAACGTCGAGACTGCGTTCTTCACAATTCTAAAAGAGATTTATAGGATAATCAGCAAGAAGAGCCTTGCAGCTGGGGAAGCAATAGATATTAGTGGGAATGCGGCGCTGTTTAAAGGAACTAATATTATTGTTCCTGGACAAGACCAAGATTCTGTGAAAAAAGGGTGTTGTTTTGCTTCGTGAACTTCACATGATTCCATAATCATTTGAGTTGGGACATTGTTTTTCTATTCCACTTTGATTTATACTAAGAAAAATGAATTCAATGTATTACTAATTTGTATAGAGACCGGCTTGATACCCCCATGGATCTCTCTCTCGC

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTTTAACCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTGCTCGATTTTCACGGGATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTTGTTATTGATCAGAAAACAGTGAAGGCCCAGATATGGGATACTGCTGGACAAGAACGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTGGTTTACGATATGACGAAGCGCCAGTCGTTCGATCACATGTCCCGGTGGCTGGAAGAACTAAGAGGACATGCCGATAAGAACATCGTTATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCAGAGCAGTGCCAACAGAAGATGCACAAGAATTTGCAGAAAGAGAGAACCTGTTCTTCATGGAGACATCAGCGCTCGAGTCGACAAACGTCGAGACTGCGTTCTTCACAATTCTAAAAGAGATTTATAGGATAATCAGCAAGAAGAGCCTTGCAGCTGGGGAAGCAATAGATATTAGTGGGAATGCGGCGCTGTTTAAAGGAACTAATATTATTGTTCCTGGACAAGACCAAGATTCTGTGAAAAAAGGGTGTTGTTTTGCTTCGTGA

Homology

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BLAST of CmoCh03G000810 vs. Swiss-Prot
Match: RAA4D_ARATH (Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 7.8e-104
Identity = 189/220 (85.91%), Postives = 203/220 (92.27%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGD+NQKIDYVFKVVLIGDSAVGKTQLLARF+R+EFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM++WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TIL EIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSVKKGCC 221
           SKKSL A +  D  GN++L KGT II+P + +   + GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

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BLAST of CmoCh03G000810 vs. Swiss-Prot
Match: RLGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2)

HSP 1 Score: 351.3 bits (900), Expect = 7.8e-96
Identity = 174/219 (79.45%), Postives = 196/219 (89.50%), Query Frame = 1


Query: 5   YGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG+  QKIDYVFKVVLIGDSAVGK+QLLARF+R+EF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH++RWLEELRGHADKNIVIM
Sbjct: 68  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRIISKKS 184
           LIGNK DLG+LR VPTEDA+EFAERENLFFMETSALESTNVE AF T+L EIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187

Query: 185 LAAGEAIDISGNAALFKGTNIIVPGQD-QDSVKKGCCFA 223
           L A E +D SGN++L KGT I+VPGQ+     K  CC +
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

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BLAST of CmoCh03G000810 vs. Swiss-Prot
Match: RAA4C_ARATH (Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 3.9e-95
Identity = 171/223 (76.68%), Postives = 199/223 (89.24%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MS    +FNQKIDYVFKVVLIGDSAVGK+QLLARFSR+EFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH++RWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+L EIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSVKKGCCFAS 224
           SKK+L A E  +  G+++L +GT I+V G++ +S  KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

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BLAST of CmoCh03G000810 vs. Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 7.9e-88
Identity = 165/221 (74.66%), Postives = 192/221 (86.88%), Query Frame = 1


Query: 5   YGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD N KIDYVFKVVLIGDSAVGK+Q+LARF+R+EFS+DSK+TIGVEFQT+TLVID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRIISKKS 184
           LIGNKCDL + R VPTEDA+EFAE+E LFF+ETSALE+TNVE+AF T+L EIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186

Query: 185 LAAGEAIDISGNAALFKGTNIIVPGQDQD--SVKKGCCFAS 224
           LAA E+   +GN+A   G  II+PG  Q+  + +  CC AS
Sbjct: 187 LAADES-QGNGNSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226

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BLAST of CmoCh03G000810 vs. Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.0e-84
Identity = 158/221 (71.49%), Postives = 187/221 (84.62%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           M++ YGD +QKIDYVFKVVLIGDSAVGK+Q+LARF+R+EFS+DSKATIGVEFQT+TL I 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQ 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
            K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNK DL   RAVPTEDA+EFA++E LFF+ETSA+E+TN+E AF T+L EI+ I+
Sbjct: 121 IVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIV 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQ-DSVKKGCC 221
           +KK+LAA +    +GN A   G  I+VPG  Q    KK CC
Sbjct: 181 NKKNLAADDN-QSNGNPASLTGKKILVPGPGQVIPEKKACC 220

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BLAST of CmoCh03G000810 vs. TrEMBL
Match: A0A0A0KW90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152280 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 1.5e-114
Identity = 211/223 (94.62%), Postives = 217/223 (97.31%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGD+NQKIDYVFKVVLIGDSAVGKTQLLARFSR+EFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM+RWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTIL EIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSVKKGCCFAS 224
           SKKSLAAGE IDI  N ALFKGT+I+VPGQDQDS +KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

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BLAST of CmoCh03G000810 vs. TrEMBL
Match: A0A067F1B3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027382mg PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.8e-105
Identity = 194/224 (86.61%), Postives = 210/224 (93.75%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGD+NQKIDYVFKVVLIGDSAVGK+QLLARF+R+EFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM+RWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF T+L EIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSV-KKGCCFAS 224
           SKKSL A +  D++GN+ L KGT IIVPGQDQ+S  K+GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

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BLAST of CmoCh03G000810 vs. TrEMBL
Match: V4S363_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005824mg PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.8e-105
Identity = 194/224 (86.61%), Postives = 210/224 (93.75%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGD+NQKIDYVFKVVLIGDSAVGK+QLLARF+R+EFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM+RWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF T+L EIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSV-KKGCCFAS 224
           SKKSL A +  D++GN+ L KGT IIVPGQDQ+S  K+GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

[Close]

BLAST of CmoCh03G000810 vs. TrEMBL
Match: A0A061EWF7_THECC (RAB GTPase A4D OS=Theobroma cacao GN=TCM_024843 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.8e-102
Identity = 189/220 (85.91%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSN YGD+NQKIDYVFKVVLIGDSAVGK+QLLARF+R+EFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNFYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLAID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM+RWLEELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALESTNVETAF T+L EIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSVKKGCC 221
           SKK+LAA + +D +GN+ L KGT IIVP Q+  + +KG C
Sbjct: 181 SKKTLAANDELDPNGNSGLLKGTRIIVPNQELQTERKGGC 220

[Close]

BLAST of CmoCh03G000810 vs. TrEMBL
Match: A0A0D2NSL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G140300 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.0e-102
Identity = 189/221 (85.52%), Postives = 207/221 (93.67%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGD+NQ+IDYVFKVVLIGDSAVGK+QLLARF+R+EFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQRIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
            KTVK+QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD+M+RWLEELRGHAD+N
Sbjct: 61  NKTVKSQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMARWLEELRGHADQN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           +VIML+GNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALESTNVETAFFT+L EIYRII
Sbjct: 121 LVIMLVGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALESTNVETAFFTVLTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQD-QDSVKKGCC 221
           SKK+L A E +D +GNAAL KGT IIVP Q+ Q   + GCC
Sbjct: 181 SKKTLTANEELDPNGNAALLKGTRIIVPNQEMQKDSRGGCC 221

[Close]

BLAST of CmoCh03G000810 vs. TAIR10
Match: AT3G12160.1 (AT3G12160.1 RAB GTPase homolog A4D)

HSP 1 Score: 377.9 bits (969), Expect = 4.4e-105
Identity = 189/220 (85.91%), Postives = 203/220 (92.27%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGD+NQKIDYVFKVVLIGDSAVGKTQLLARF+R+EFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM++WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TIL EIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSVKKGCC 221
           SKKSL A +  D  GN++L KGT II+P + +   + GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of CmoCh03G000810 vs. TAIR10
Match: AT5G47960.1 (AT5G47960.1 RAB GTPase homolog A4C)

HSP 1 Score: 349.0 bits (894), Expect = 2.2e-96
Identity = 171/223 (76.68%), Postives = 199/223 (89.24%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MS    +FNQKIDYVFKVVLIGDSAVGK+QLLARFSR+EFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH++RWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+L EIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSVKKGCCFAS 224
           SKK+L A E  +  G+++L +GT I+V G++ +S  KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

[Close]

BLAST of CmoCh03G000810 vs. TAIR10
Match: AT5G65270.1 (AT5G65270.1 RAB GTPase homolog A4A)

HSP 1 Score: 307.0 bits (785), Expect = 9.6e-84
Identity = 159/219 (72.60%), Postives = 184/219 (84.02%), Query Frame = 1


Query: 5   YGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD +QKIDYVFKVVLIGDSAVGK+Q+LAR++RDEFS+DSKATIGVEFQT+TLVID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRIISKKS 184
           LIGNK DL   RA+PTEDA+EFAE+E LFF+ETSA  +TNVE+AF T+L EI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186

Query: 185 LAAGEAIDISGNAALFKGTNI-IVPGQDQDSVKKG--CC 221
           LAA E  + +GN     G  I IVPG  Q    K   CC
Sbjct: 187 LAASEDQE-NGNPGSLAGKKIDIVPGPGQVIPNKSNMCC 224

[Close]

BLAST of CmoCh03G000810 vs. TAIR10
Match: AT4G39990.1 (AT4G39990.1 RAB GTPase homolog A4B)

HSP 1 Score: 298.5 bits (763), Expect = 3.4e-81
Identity = 152/222 (68.47%), Postives = 183/222 (82.43%), Query Frame = 1


Query: 5   YGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG  + K+DYVFKVVLIGDSAVGK+QLLARF+RDEFS+DSKATIGVEFQT+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRIISKKS 184
           LIGNK DL   RAVPTEDA+EFAE+E LFF+ETSAL +TNVE +F T++ +IY  ++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186

Query: 185 LAA-GEAIDISGNAALFKGTNIIVPGQDQDSVKK--GCCFAS 224
           LA+ G+    S N     G  I++PG  Q+   K   CC +S
Sbjct: 187 LASEGD----SNNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of CmoCh03G000810 vs. TAIR10
Match: AT1G09630.1 (AT1G09630.1 RAB GTPase 11C)

HSP 1 Score: 270.4 bits (690), Expect = 9.9e-73
Identity = 135/215 (62.79%), Postives = 174/215 (80.93%), Query Frame = 1


Query: 9   NQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVIDQKTVKAQI 68
           +++ DY+FKVVLIGDS VGK+ LL+RF+R+EF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6   DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK  +F+++SRWL+ELR HAD NIVIMLIGN
Sbjct: 66  WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125

Query: 129 KCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRIISKKSLAAG 188
           K DL  LRAV TEDAQ +AE+E L F+ETSALE+ NVE AF TIL E+YRIISKKS+++ 
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSD 185

Query: 189 EAIDISGNAALFKGTNIIVPGQDQDSVKKGCCFAS 224
           +    + NA + +G  I V    + + KK CC +S
Sbjct: 186 QT---TANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of CmoCh03G000810 vs. NCBI nr
Match: gi|659121765|ref|XP_008460801.1| (PREDICTED: ras-related protein RABA4d [Cucumis melo])

HSP 1 Score: 421.0 bits (1081), Expect = 1.3e-114
Identity = 212/223 (95.07%), Postives = 216/223 (96.86%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGD+NQKIDYVFKVVLIGDSAVGKTQLLARFSR+EFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM+RWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTIL EIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSVKKGCCFAS 224
           SKKSLAAGE IDI  N ALFKGTNI+VPGQDQDS  KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

[Close]

BLAST of CmoCh03G000810 vs. NCBI nr
Match: gi|449464898|ref|XP_004150166.1| (PREDICTED: ras-related protein RABA4d [Cucumis sativus])

HSP 1 Score: 420.2 bits (1079), Expect = 2.2e-114
Identity = 211/223 (94.62%), Postives = 217/223 (97.31%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGD+NQKIDYVFKVVLIGDSAVGKTQLLARFSR+EFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM+RWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTIL EIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSVKKGCCFAS 224
           SKKSLAAGE IDI  N ALFKGT+I+VPGQDQDS +KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

[Close]

BLAST of CmoCh03G000810 vs. NCBI nr
Match: gi|567857618|ref|XP_006421492.1| (hypothetical protein CICLE_v10005824mg [Citrus clementina])

HSP 1 Score: 389.0 bits (998), Expect = 5.4e-105
Identity = 194/224 (86.61%), Postives = 210/224 (93.75%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGD+NQKIDYVFKVVLIGDSAVGK+QLLARF+R+EFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM+RWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF T+L EIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSV-KKGCCFAS 224
           SKKSL A +  D++GN+ L KGT IIVPGQDQ+S  K+GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

[Close]

BLAST of CmoCh03G000810 vs. NCBI nr
Match: gi|1009106149|ref|XP_015872112.1| (PREDICTED: ras-related protein RABA4d [Ziziphus jujuba])

HSP 1 Score: 384.0 bits (985), Expect = 1.7e-103
Identity = 197/222 (88.74%), Postives = 207/222 (93.24%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGD+NQKIDYVFKVVLIGDSAVGKTQLLARFSR+EFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
            K VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM+RWLEELRGHADKN
Sbjct: 61  SKIVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TIL EIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDS-VKKGCCF 222
           SKK+L A + ID +G + L KGT IIVPGQ+QDS   KGCCF
Sbjct: 181 SKKTLTASDDIDSNG-SGLLKGTKIIVPGQEQDSGGGKGCCF 221

[Close]

BLAST of CmoCh03G000810 vs. NCBI nr
Match: gi|590636715|ref|XP_007028923.1| (RAB GTPase A4D [Theobroma cacao])

HSP 1 Score: 380.2 bits (975), Expect = 2.5e-102
Identity = 189/220 (85.91%), Postives = 204/220 (92.73%), Query Frame = 1


Query: 1   MSNLYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRDEFSVDSKATIGVEFQTKTLVID 60
           MSN YGD+NQKIDYVFKVVLIGDSAVGK+QLLARF+R+EFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNFYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLAID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMSRWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHM+RWLEELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILKEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALESTNVETAF T+L EIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGEAIDISGNAALFKGTNIIVPGQDQDSVKKGCC 221
           SKK+LAA + +D +GN+ L KGT IIVP Q+  + +KG C
Sbjct: 181 SKKTLAANDELDPNGNSGLLKGTRIIVPNQELQTERKGGC 220

The following BLAST results are available for this feature:

BLAST of CmoCh03G000810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA4D_ARATH	7.8e-104	85.91	Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1 SV=1	[more]
RLGP1_ORYSJ	7.8e-96	79.45	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2	[more]
RAA4C_ARATH	3.9e-95	76.68	Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2 SV=1	[more]
RB11A_LOTJA	7.9e-88	74.66	Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1	[more]
RB11D_TOBAC	4.0e-84	71.49	Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1	[more]

BLAST of CmoCh03G000810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW90_CUCSA	1.5e-114	94.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152280 PE=4 SV=1	[more]
A0A067F1B3_CITSI	3.8e-105	86.61	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027382mg PE=4 SV=1	[more]
V4S363_9ROSI	3.8e-105	86.61	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005824mg PE=4 SV=1	[more]
A0A061EWF7_THECC	1.8e-102	85.91	RAB GTPase A4D OS=Theobroma cacao GN=TCM_024843 PE=4 SV=1	[more]
A0A0D2NSL7_GOSRA	3.0e-102	85.52	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G140300 PE=4 SV=1	[more]

BLAST of CmoCh03G000810 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12160.1	4.4e-105	85.91	RAB GTPase homolog A4D	[more]
AT5G47960.1	2.2e-96	76.68	RAB GTPase homolog A4C	[more]
AT5G65270.1	9.6e-84	72.60	RAB GTPase homolog A4A	[more]
AT4G39990.1	3.4e-81	68.47	RAB GTPase homolog A4B	[more]
AT1G09630.1	9.9e-73	62.79	RAB GTPase 11C	[more]

BLAST of CmoCh03G000810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121765\|ref\|XP_008460801.1\|	1.3e-114	95.07	PREDICTED: ras-related protein RABA4d [Cucumis melo]	[more]
gi\|449464898\|ref\|XP_004150166.1\|	2.2e-114	94.62	PREDICTED: ras-related protein RABA4d [Cucumis sativus]	[more]
gi\|567857618\|ref\|XP_006421492.1\|	5.4e-105	86.61	hypothetical protein CICLE_v10005824mg [Citrus clementina]	[more]
gi\|1009106149\|ref\|XP_015872112.1\|	1.7e-103	88.74	PREDICTED: ras-related protein RABA4d [Ziziphus jujuba]	[more]
gi\|590636715\|ref\|XP_007028923.1\|	2.5e-102	85.91	RAB GTPase A4D [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009827	plant-type cell wall modification
biological_process	GO:0080092	regulation of pollen tube growth
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0045177	apical part of cell
cellular_component	GO:0070382	exocytic vesicle
cellular_component	GO:0016020	membrane
cellular_component	GO:0090404	pollen tube tip
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019900	kinase binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G000810.1	CmoCh03G000810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 17..177 score: 1.1
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 15..172 score: 7.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 10..220 score: 2.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..182 score: 6.58
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 154..176 score: 2.9E-42coord: 16..37 score: 2.9E-42coord: 39..55 score: 2.9E-42coord: 119..132 score: 2.9E-42coord: 57..79 score: 2.9
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 8..222 score: 6.7E
None	No IPR available	PANTHER	PTHR24073:SF578	RAS-RELATED PROTEIN RABA4D	coord: 8..222 score: 6.7E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 score: 1.8
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 18..175 score: 3.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 score: 6.9E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..215 score: 3.
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 score: 0
None	No IPR available	PROFILE	PS51419	RAB	coord: 11..220 score: 36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G000810	CmaCh03G000800	Cucurbita maxima (Rimu)	cmacmoB654
CmoCh03G000810	Cla000742	Watermelon (97103) v1	cmowmB634
CmoCh03G000810	Csa4G152280	Cucumber (Chinese Long) v2	cmocuB662
CmoCh03G000810	MELO3C023181	Melon (DHL92) v3.5.1	cmomeB601
CmoCh03G000810	ClCG04G000360	Watermelon (Charleston Gray)	cmowcgB585
CmoCh03G000810	CSPI04G10370	Wild cucumber (PI 183967)	cmocpiB674
CmoCh03G000810	Lsi01G018930	Bottle gourd (USVL1VR-Ls)	cmolsiB583
CmoCh03G000810	Cp4.1LG10g11790	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G000810	MELO3C023181.2	Melon (DHL92) v3.6.1	cmomedB699
CmoCh03G000810	CsaV3_4G010530	Cucumber (Chinese Long) v3	cmocucB0786
CmoCh03G000810	Cla97C04G068730	Watermelon (97103) v2	cmowmbB658
CmoCh03G000810	Bhi03G002125	Wax gourd	cmowgoB0799
CmoCh03G000810	CsGy4G010060	Cucumber (Gy14) v2	cgybcmoB513
CmoCh03G000810	Carg22467	Silver-seed gourd	carcmoB0273

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G000810	Cucurbita moschata (Rifu)	cmocmoB461
CmoCh03G000810	Cucurbita maxima (Rimu)	cmacmoB863
CmoCh03G000810	Wild cucumber (PI 183967)	cmocpiB665
CmoCh03G000810	Cucumber (Chinese Long) v2	cmocuB654
CmoCh03G000810	Melon (DHL92) v3.5.1	cmomeB609
CmoCh03G000810	Watermelon (97103) v1	cmowmB627
CmoCh03G000810	Cucurbita pepo (Zucchini)	cmocpeB620
CmoCh03G000810	Cucumber (Gy14) v2	cgybcmoB503
CmoCh03G000810	Melon (DHL92) v3.6.1	cmomedB691
CmoCh03G000810	Silver-seed gourd	carcmoB0394
CmoCh03G000810	Cucumber (Chinese Long) v3	cmocucB0776
CmoCh03G000810	Wax gourd	cmowgoB0788