CsaV3_4G010530 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G010530
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Ras-related protein like
Location	chr4 : 8412367 .. 8416753 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCACTTCTCGCTCTCTTTTCCATCTCTCTTCTTCTTCCTTCATTCTCTTCATTTTCCAGCTTCCAAAATCCACACACTATTCTCTCAAATTTTCCCTTCAAACCCCAGCTCTGATTTTCAATTCCCCTCCCAACTATTTTGCCCACATTTCTCTTTTTACGCTCGATTTTATTTTGAGGCATTTGGGCAATTTGGTTTGAGTTGTGATGTTGTTATCCGTCTAATCTGCGTGTTTTAGAGGTGGGGTTTGTGGGATTTTTGAGAGAAAGAGAATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCTGTCGGCAAAACCCAGCTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTCATTGATCAAAAAACAGTGAAAGCCCAGATATGGGATACTGCAGGACAAGAAAGGTTTGTGCCCCTTTTTTTTTTTCTTTTGTGGGGTTCATTGGTTTTTTAGACTACTTCATTGTTCAAGGAGTTTGGATCTGTGTAAGCTTTTGAAATTCGTAAAATCCAAACGAGCTTTTGAGCTTTTGTAATAATTAATAGGTTGTATATTTTGAATGAATGTATGATACAAGATAGAGTTTGACAACAAGGAGTTTGGAATCCTCCAATAGAATGTCAGTAATGGAAGGAATGTCAGTAATGGTGAAAAACCAAGCCTTAGGAGGATATCATCTGAAGATGTGAAACATGGTGTTTGAAAATGATGTCTGGTTGAAATTGTTTTTCACTCACTTTTTAATTGTCCCTAGGTAGATTTCCTCTTCGGCTTATGTTGATGATATTAGGTTTTGCTGTTTTTATCATATATAACTGCAGCTTTGCTGCAATATTATGCTGTTTCAGATTAAATAAAATTATTGTGATAGGACTAGTAGGCCATGTGTTTGTTTTACATATGCTCAAAAGAGAAATGAGAGAACGAATTTCTAGAAGAAAGCTAATGTGAAGGTGAAAGGGTGCGAGTTATGTCTGATGGAAATAGTTTGGAGTTTGGTGTACTGTGGCCCATCAATGGAAATGCATATAAAACGGGAGAAAAGTAAAGCATAAATGTGAGATAAAGAAGATGAAAGAAGATGGGAGAGTTGTGAAAAAACTGCACGAAGTCACAACGGGGAGTTGGAGGCACCTCTCTAGATAGCAACATTTATGGTTTGGTTCTTGCTAAGTGAAAGGGAGTGAACGACTCTAAAAGAAAAGGGAAGAGAACGATTGGTGAGGAATAAAGCATTCTTGATAAAGGGAAGGTGATCGTTGAACAATTTAATGGGGAGATTAGTAAGACGGGGAAGAGGAAGACAAGCAGCACTGACAAGAAGTCTAAAGCTGGCTCAGTTTTATGGAGTTGTTCCAGATGGATGGATGAATCCTCCAAGCATAAGGTTATGTCAAGGTTATTCAGCAAATAGATGCAAGTTCCGGTGATTAGTATGATGAGATGTTTGATGGGGAGTCATCAGAAACGCCTCAAATTTAAGGGAGAGACATGAATAAATTGAAATCACATCTAAATGAGAGGGATTCTAAGGATATGAAAGACAGTTAAAAAAGGCTAAAACGAATTGAAAGTTACTACCTATACCAATGAAGGCACCTTTCCTTCTGGTGGCTCATTCATAAGAACTCTAAAGTTAAGCATTATTAGTTTAGAGCAATCCTCTGTTGGGTGAGCTTCTAGGGATTTTCATAGGAAGTATTTGAGTGAGGACAAAGTATGTTGAAAGAACTTATATTGGTTTATGGCATAAGCTTTACTCTTAGAATCAGTAGAATGCTAAAAGAATGTTAGATACCTATATTAGTATAGGATTAGGGGTATAAGGGTAGTTAGATATTTAGGAAGTTACTAGTAGTTATTGTGTAAGTGTGGTGTGGTGTGGTTACATGTAGTTATTATGTAATTGTGGTTACTAGGGTGGTTACATCTTGTTATAAATGGAGGGAGGGTAAGTGAGAGGGGGGAATTGGGTGGAGTGATCTAGGGCTTGGGTGAGAGTACACAAGAGGGAGGTTCCAAGTGCCTTATACTTGGGTTTATCTTGTATTTTCTTATAGTTACATTATAATAAATTCAGAGCTTGTTCTTGTTAGGAAGTATCCTAACAAATAACTCATGTTGGCTTATAGGATAGTCTTCACTCGTAGAAGCAATTCAGGATAGGGATGACTCTGTCCAGTGGCAGAGGATGCTAGGGAATGTTGGGATCATCAAGTGTCGAATCCGGATTCTGAATATTAGGTCATCTTGTGTAGGTATAGGAAGATGTTGGATATTCTGACTGATGCTGAGTTGCACCAGTGCAGAAAGTAGGCTATATGTGTCCAGTGTGAGCTCTATCGATAGTTGGTGTACAACCTTCTGTCATCGGGGACCAAACTCTAACAAAAGTATAATGCTGCATTCTTTGGATGCTATTAAGTTTCAGCTCATCTGGGACCAGAAAATTATGAAGGCAGTCCCGAGTTGGTGACAAGGGCTGATAGTCTTAATTTTTAGAATAGGGGCATGACTTTCTAACTCAAGTCTAAACAATTTTTTATGTCATTGCTGCCCCATCCCTCTACTAATGAACCCCTGTTATCAAACCCCTAAGCAACAACTAAGGGTGCATTTGGTAAGTGATCTGGAAACAAGACACTCAATGATTAACAAAGTTGTATTTCTATTTTTCAATGTTTTTAAATATGCAATTAGTACTAGATTTAGAAACTATATCTCAATTTCAAACGTTGTTGAAAGTGGGTTTGGTAATATAGTTATAAATAGAAGAATTAATAGGTCATAAATTCGTCTCTTGTATTCTAAGAAGAAGATGAAGGATAGAGTAACCATTGAAAGGCTAATCATAAAGAGTGTGAGTTATGAAGGGCTTAGCTAGTTAGGAGTATCGGGATCAGGTGCACTTTTTGCAGTTTCGTTATCACTAGATTGGAACACAAATGTATGGGGAGTGAGAAAGGCATAATTTGAGTGAAGGGAAAGGGAAGAGTTGTGGGAAAGCTGAGGGAAGCTGAAGAAAAGTTTTTGTTTTGCATGAAGAAACTGAGGTAAAATTATGATCCATTTATCAACTTTTTTCTGGCTTTGATGCATATAATCCCTTAAGTCAGATTTGAGAACGACAAGTGATGATATCTTGAATCCAATCAATAATCTGTATTCATTACTTTTTTGTATTTCTTCACAATAGATGTAACATTGATGAAATTTTTGCATTATCTCTCAAACAAAATATTGTATGTTTTAAGTATATCTACTCTTAAATTCATAATTAAACAGCCTCGTTGTTGTATAGTTGTCTGGCATGAGACAAGTTTGACTTTTAGAATGCTAGGAGCCCATGCCCTGTGGTATCAACAAGTTAGGATTTGTATTATATTGTAATATTTTCCATTTGGTTGCTGATATCAAAACCAACTTGTGAGTTGCTGATATCGAAACCAATTTATGAGTTTTTGATATCAAAATTGAGTTATAAGTATTATGTTTTCCGTACGTCATTTGGTGTTTGTGTCTGCTATTACGCTAAAAAAGTTCCCATTTTGACTTGATCAGGTTCTTGTTTGAATTGTTATTGGATCCAACATCGTTATCTGATAAAACAGCACACGTAAATTTGACATTTTTATGTACTTGCTTTGTGAATATTGCTGTTAAGTTGACTATAGTTTCTAAAAATATGCCCTTTTCCGCATTGCCAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCGTTCGACCACATGGCAAGGTGGCTGGAGGAACTTAGAGGGCACGCTGATAAGAACATCGTTATAATGCTCATTGGAAACAAGTGCGATTTAGGAAGTCTCCGAGCAGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCCACAAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGCCCTGTTTAAAGGGACTAGTATAGTTGTTCCTGGACAAGACCAGGATTCTGGGAGAAAAGGTTGTTGCTTCGCGTCATGAATTTCACATAATTCCATAATCATTTCGGTTGTGACATTGTTTTTTAATTCCAATTGGATTTATACTAAGAAAAAAATTCATGTATTAGTAATTTGTAGAGTGACTGGCTTGATACCATGGATGAAGGATTAGTTAAGC

mRNA sequence

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCTGTCGGCAAAACCCAGCTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTCATTGATCAAAAAACAGTGAAAGCCCAGATATGGGATACTGCAGGACAAGAAAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCGTTCGACCACATGGCAAGGTGGCTGGAGGAACTTAGAGGGCACGCTGATAAGAACATCGTTATAATGCTCATTGGAAACAAGTGCGATTTAGGAAGTCTCCGAGCAGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCCACAAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGCCCTGTTTAAAGGGACTAGTATAGTTGTTCCTGGACAAGACCAGGATTCTGGGAGAAAAGGTTGTTGCTTCGCGTCATGA

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATCGGAGATTCGGCTGTCGGCAAAACCCAGCTCCTTGCTCGATTTTCTCGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTCATTGATCAAAAAACAGTGAAAGCCCAGATATGGGATACTGCAGGACAAGAAAGGTACAGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCGATGCTAGTTTATGATATGACGAAGCGCCAGTCGTTCGACCACATGGCAAGGTGGCTGGAGGAACTTAGAGGGCACGCTGATAAGAACATCGTTATAATGCTCATTGGAAACAAGTGCGATTTAGGAAGTCTCCGAGCAGTGCCAACAGAAGATGCACAAGAATTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACATCGGCTCTGGAGTCCACAAATGTCGAAACTGCATTCTTCACAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAAAGTCTTGCAGCTGGGGAAGAGATAGATATTGGTTCGAATCCAGCCCTGTTTAAAGGGACTAGTATAGTTGTTCCTGGACAAGACCAGGATTCTGGGAGAAAAGGTTGTTGCTTCGCGTCATGA

Protein sequence

MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS

Homology

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BLAST of CsaV3_4G010530 vs. NCBI nr
Match: XP_004150166.1 (PREDICTED: ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical protein Csa_4G152280 [Cucumis sativus])

HSP 1 Score: 442.6 bits (1137), Expect = 8.1e-121
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

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BLAST of CsaV3_4G010530 vs. NCBI nr
Match: XP_008460801.1 (PREDICTED: ras-related protein RABA4d [Cucumis melo])

HSP 1 Score: 439.1 bits (1128), Expect = 8.9e-120
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIGSNPALFKGT+IVVPGQDQDSG KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

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BLAST of CsaV3_4G010530 vs. NCBI nr
Match: XP_022925137.1 (ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related protein RABA4d [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.1 bits (1102), Expect = 9.2e-117
Identity = 216/223 (96.86%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGT+IVVPGQDQ  GRKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 223

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BLAST of CsaV3_4G010530 vs. NCBI nr
Match: XP_022966454.1 (ras-related protein RABA4d [Cucurbita maxima])

HSP 1 Score: 427.6 bits (1098), Expect = 2.7e-116
Identity = 215/223 (96.41%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGE IDIG NPALFKGT+IVVPGQ+Q  GRKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 223

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BLAST of CsaV3_4G010530 vs. NCBI nr
Match: XP_022151622.1 (ras-related protein RABA4d-like [Momordica charantia])

HSP 1 Score: 424.5 bits (1090), Expect = 2.3e-115
Identity = 215/223 (96.41%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKK+LAAGEEIDIG  P  FKGT+IVVPGQD DSGRKGCCFAS
Sbjct: 181 SKKTLAAGEEIDIG-GPGHFKGTNIVVPGQDSDSGRKGCCFAS 222

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BLAST of CsaV3_4G010530 vs. TAIR10
Match: AT3G12160.1 (RAB GTPase homolog A4D)

HSP 1 Score: 383.6 bits (984), Expect = 8.1e-107
Identity = 192/220 (87.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCC 221
           SKKSL A ++ D   N +L KGT I++P + +   R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

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BLAST of CsaV3_4G010530 vs. TAIR10
Match: AT5G47960.1 (RAB GTPase homolog A4C)

HSP 1 Score: 355.1 bits (910), Expect = 3.1e-98
Identity = 175/223 (78.48%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKK+L A EE + G + +L +GT IVV G++ +S  KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

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BLAST of CsaV3_4G010530 vs. TAIR10
Match: AT5G65270.1 (RAB GTPase homolog A4A)

HSP 1 Score: 310.8 bits (795), Expect = 6.7e-85
Identity = 159/219 (72.60%), Postives = 186/219 (84.93%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD +QKIDYVFKVVLIGDSAVGK+Q+LAR++R+EFS+DSKATIGVEFQT+TLVID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DL   RA+PTEDA+EFAE+E LFF+ETSA  +TNVE+AF T+LTEI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186

Query: 185 LAAGEEIDIGSNPALFKGTSI-VVPGQDQDSGRKG--CC 221
           LAA E+ + G NP    G  I +VPG  Q    K   CC
Sbjct: 187 LAASEDQENG-NPGSLAGKKIDIVPGPGQVIPNKSNMCC 224

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BLAST of CsaV3_4G010530 vs. TAIR10
Match: AT4G39990.1 (RAB GTPase homolog A4B)

HSP 1 Score: 302.0 bits (772), Expect = 3.1e-82
Identity = 151/221 (68.33%), Postives = 184/221 (83.26%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG  + K+DYVFKVVLIGDSAVGK+QLLARF+R+EFS+DSKATIGVEFQT+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DL   RAVPTEDA+EFAE+E LFF+ETSAL +TNVE +F T++T+IY  ++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186

Query: 185 LAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRK--GCCFAS 224
           LA+  +    +NP    G  I++PG  Q+   K   CC +S
Sbjct: 187 LASEGD---SNNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of CsaV3_4G010530 vs. TAIR10
Match: AT1G09630.1 (RAB GTPase 11C)

HSP 1 Score: 268.5 bits (685), Expect = 3.8e-72
Identity = 133/215 (61.86%), Postives = 175/215 (81.40%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQI 68
           +++ DY+FKVVLIGDS VGK+ LL+RF+RNEF ++SK+TIGVEF T+TL ++ +TVKAQI
Sbjct: 6   DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK  +F++++RWL+ELR HAD NIVIMLIGN
Sbjct: 66  WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125

Query: 129 KCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAG 188
           K DL  LRAV TEDAQ +AE+E L F+ETSALE+ NVE AF TIL+E+YRIISKKS+++ 
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSD 185

Query: 189 EEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           +     +N  + +G +I V    + + +K CC +S
Sbjct: 186 QTT---ANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of CsaV3_4G010530 vs. Swiss-Prot
Match: sp|Q9LH50|RAA4D_ARATH (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.5e-105
Identity = 192/220 (87.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCC 221
           SKKSL A ++ D   N +L KGT I++P + +   R GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of CsaV3_4G010530 vs. Swiss-Prot
Match: sp|Q9FE79|RAA4C_ARATH (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.5e-97
Identity = 175/223 (78.48%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKK+L A EE + G + +L +GT IVV G++ +S  KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

[Close]

BLAST of CsaV3_4G010530 vs. Swiss-Prot
Match: sp|P25766|RLGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 354.8 bits (909), Expect = 7.2e-97
Identity = 177/219 (80.82%), Postives = 194/219 (88.58%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG+  QKIDYVFKVVLIGDSAVGK+QLLARF+RNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIM
Sbjct: 68  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNK DLG+LR VPTEDA+EFAERENLFFMETSALESTNVE AF T+LTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187

Query: 185 LAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           L A EE+D   N +L KGT IVVPGQ+     K  C  S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

[Close]

BLAST of CsaV3_4G010530 vs. Swiss-Prot
Match: sp|Q40191|RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.2e-88
Identity = 167/221 (75.57%), Postives = 190/221 (85.97%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD N KIDYVFKVVLIGDSAVGK+Q+LARF+RNEFS+DSK+TIGVEFQT+TLVID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
           LIGNKCDL + R VPTEDA+EFAE+E LFF+ETSALE+TNVE+AF T+LTEIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186

Query: 185 LAAGEEIDIGSNPALFKGTSIVVPGQDQD--SGRKGCCFAS 224
           LAA E    G N A   G  I++PG  Q+  + R  CC AS
Sbjct: 187 LAADESQGNG-NSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226

[Close]

BLAST of CsaV3_4G010530 vs. Swiss-Prot
Match: sp|Q40520|RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.2e-86
Identity = 162/221 (73.30%), Postives = 189/221 (85.52%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           M++ YGD +QKIDYVFKVVLIGDSAVGKTQ+LARF+RNEFS+DSKATIGVEFQT+TLVI 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIML GNK DL   RAVPTEDA+EFA++E LFF+ETSA+E+T +E AF T+LTEI+ I+
Sbjct: 121 IVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIV 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQ-DSGRKGCC 221
           +KK+LAA +E    SNPA   G  I+VPG  Q   G+K CC
Sbjct: 181 NKKNLAA-DENQSNSNPASLTGKKILVPGPGQVIPGKKACC 220

[Close]

BLAST of CsaV3_4G010530 vs. TrEMBL
Match: tr|A0A0A0KW90|A0A0A0KW90_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 5.3e-121
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

[Close]

BLAST of CsaV3_4G010530 vs. TrEMBL
Match: tr|A0A1S3CDP9|A0A1S3CDP9_CUCME (ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 5.9e-120
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKKSLAAGEEIDIGSNPALFKGT+IVVPGQDQDSG KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

[Close]

BLAST of CsaV3_4G010530 vs. TrEMBL
Match: tr|A0A2P5CAT0|A0A2P5CAT0_PARAD (Small GTP-binding domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_169010 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.8e-106
Identity = 196/223 (87.89%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDY+QKIDYVFKVVLIGDSAVGKTQLLARF+RNEFS+DSKATIGVEFQTKTL+ID
Sbjct: 1   MSNLYGDYSQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSIDSKATIGVEFQTKTLIID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRA+PTEDAQEFA+RENLFFMETSALESTNVETAFFTILTEIY II
Sbjct: 121 IVIMLIGNKCDLGSLRAIPTEDAQEFAQRENLFFMETSALESTNVETAFFTILTEIYGII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 224
           SKK+L A +E+D   N  L KGT I VP Q ++S RKGCC +S
Sbjct: 181 SKKTLTASDEVDSSGNSGLLKGTKIFVPSQ-EESARKGCCLSS 222

[Close]

BLAST of CsaV3_4G010530 vs. TrEMBL
Match: tr|V4S363|V4S363_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005824mg PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.9e-106
Identity = 196/224 (87.50%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF T+LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDS-GRKGCCFAS 224
           SKKSL A +E D+  N  L KGT I+VPGQDQ+S  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

[Close]

BLAST of CsaV3_4G010530 vs. TrEMBL
Match: tr|A0A067F1B3|A0A067F1B3_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027382mg PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.9e-106
Identity = 196/224 (87.50%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFSVDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL+ELRGHADKN
Sbjct: 61  HKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF T+LTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTVLTEIYRII 180

Query: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDS-GRKGCCFAS 224
           SKKSL A +E D+  N  L KGT I+VPGQDQ+S  ++GCC +S
Sbjct: 181 SKKSLTANDEHDVAGNSNLLKGTRIIVPGQDQNSASKRGCCLSS 224

The following BLAST results are available for this feature:

BLAST of CsaV3_4G010530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150166.1	8.1e-121	100.00	PREDICTED: ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical...	[more]
XP_008460801.1	8.9e-120	99.10	PREDICTED: ras-related protein RABA4d [Cucumis melo]	[more]
XP_022925137.1	9.2e-117	96.86	ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related prot...	[more]
XP_022966454.1	2.7e-116	96.41	ras-related protein RABA4d [Cucurbita maxima]	[more]
XP_022151622.1	2.3e-115	96.41	ras-related protein RABA4d-like [Momordica charantia]	[more]

BLAST of CsaV3_4G010530 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12160.1	8.1e-107	87.27	RAB GTPase homolog A4D	[more]
AT5G47960.1	3.1e-98	78.48	RAB GTPase homolog A4C	[more]
AT5G65270.1	6.7e-85	72.60	RAB GTPase homolog A4A	[more]
AT4G39990.1	3.1e-82	68.33	RAB GTPase homolog A4B	[more]
AT1G09630.1	3.8e-72	61.86	RAB GTPase 11C	[more]

BLAST of CsaV3_4G010530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LH50\|RAA4D_ARATH	1.5e-105	87.27	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
sp\|Q9FE79\|RAA4C_ARATH	5.5e-97	78.48	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
sp\|P25766\|RLGP1_ORYSJ	7.2e-97	80.82	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
sp\|Q40191\|RB11A_LOTJA	1.2e-88	75.57	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
sp\|Q40520\|RB11C_TOBAC	1.2e-86	73.30	Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1	[more]

BLAST of CsaV3_4G010530 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KW90\|A0A0A0KW90_CUCSA	5.3e-121	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1	[more]
tr\|A0A1S3CDP9\|A0A1S3CDP9_CUCME	5.9e-120	99.10	ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1	[more]
tr\|A0A2P5CAT0\|A0A2P5CAT0_PARAD	2.8e-106	87.89	Small GTP-binding domain containing protein OS=Parasponia andersonii OX=3476 GN=...	[more]
tr\|V4S363\|V4S363_9ROSI	4.9e-106	87.50	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005824mg PE=4 ...	[more]
tr\|A0A067F1B3\|A0A067F1B3_CITSI	4.9e-106	87.50	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027382mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009827	plant-type cell wall modification
biological_process	GO:0080092	regulation of pollen tube growth
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0045177	apical part of cell
cellular_component	GO:0070382	exocytic vesicle
cellular_component	GO:0016020	membrane
cellular_component	GO:0090404	pollen tube tip
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019900	kinase binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G010530.1	CsaV3_4G010530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 154..176 score: 43.15 coord: 16..37 score: 50.9 coord: 39..55 score: 34.43 coord: 119..132 score: 52.08 coord: 57..79 score: 53.74
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 18..175 e-value: 2.6E-11 score: 25.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 e-value: 1.7E-105 score: 366.5
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.0015 score: 5.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..215 e-value: 5.6E-6 score: 35.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 e-value: 3.5E-26 score: 103.0
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 13..194 e-value: 1.4E-66 score: 225.4
None	No IPR available	PANTHER	PTHR24073:SF863	RAS-RELATED PROTEIN RABA4D	coord: 2..221
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 2..221
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..220 score: 35.892
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..177 e-value: 5.07342E-123 score: 348.01
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..171 e-value: 2.0E-36 score: 123.2
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 17..177 e-value: 2.1E-61 score: 206.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..182

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G010530	CSPI04G10370	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G010530	Cucsa.038020	Cucumber (Gy14) v1	cgycucB014
CsaV3_4G010530	CmaCh03G000800	Cucurbita maxima (Rimu)	cmacucB0801
CsaV3_4G010530	CmoCh03G000810	Cucurbita moschata (Rifu)	cmocucB0786
CsaV3_4G010530	Cp4.1LG10g11790	Cucurbita pepo (Zucchini)	cpecucB0079
CsaV3_4G010530	CsGy4G010060	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G010530	Carg22467	Silver-seed gourd	carcucB0220
CsaV3_4G010530	MELO3C023181	Melon (DHL92) v3.5.1	cucmeB338
CsaV3_4G010530	ClCG04G000360	Watermelon (Charleston Gray)	cucwcgB322
CsaV3_4G010530	Lsi01G018930	Bottle gourd (USVL1VR-Ls)	cuclsiB281
CsaV3_4G010530	MELO3C023181.2	Melon (DHL92) v3.6.1	cucmedB322
CsaV3_4G010530	Cla97C04G068730	Watermelon (97103) v2	cucwmbB311
CsaV3_4G010530	Bhi03G002125	Wax gourd	cucwgoB399

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None