MELO3C019403 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019403
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	50S ribosomal protein L33
Location	chr6 : 9165913 .. 9167109 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGACGCTTTCTTGTGGAAAAAGGAATCAATTTCTCAGTAATTCTTCCTCTTCAGCTCCTTCAAACTTCATCACCTTCAACTCTCCCTCCTTCCCTGCTACCCTCTCGCTCACGCTCAGCTTCGTTCCCAATGTCAAAGGTAATCCCCAACATTTCATCCAAAATCATCATCACTGATCCATTCATCATACCTCTCTTTATTCTGTTTTTACCTTAATCCATCCAATCAAGACACGAGAAAATCGGGAATCAAGAATGACTGAGTATCATAATCGAGAACCTCTGCTGGGGAGAATTTCTTTGGTGGGGTTTGTTTAAAGTGTATTATTTCCCCCTAACAAACCAAACAGAATCCAGAGAAATTTAACATTTGGGGGTCTCTTGGAATTTTCAGGATTGCTGCCACAGAGGGCTCTGGAAAGATCAATTCGCTATGGATCCGTAATTTGCATGGCCAAAAGATATGCTCCTGACACTACAAAGAGAAAGGTATTATAAAACGTTAGCTAGCTGTTTCTTTTGGATTGATTGGTTCTTTATCTCGTTTTAGCTCGACTATGTGTGGATTATGATCGAAATTTCCTAATCAAGAGGAGAGTGATGGATATTATATGTTTTTGTATGTGTCTGTACATGTTTACCCCTTTTATGTTAACCTGTATGATATCCTTCAATATTTCCGCATTCTGACTGGTATCAGTTCCATATGGTATACAAAATATGTACTTATCTGATTGAGATTGTATCTTTGAATAAAATGATGGTGAAAATCTGATAAATCTTCTGTTGGGATTATTCTACATGGAAGTTCGGTACATTTTCTGTTTTTAACTTTAATTTTTACAACAATACAAAAGTCATTGGGAATAACGTTTTGTAATTTGTTCGTTATGTTAATGTGACTGTTGATTTGATCATGCAACTAATTTCGATTGCATTCAAATGCAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGCCAAGAAAAAGAAGACAAGGAGGAAAGGGGGAAGGAAAGATTTCAAAATAGTCAGGCTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAGATTGAGGTCCAGAAATATGACCCTATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGA

mRNA sequence

ATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGACGCTTTCTTGTGGAAAAAGGAATCAATTTCTCAGTAATTCTTCCTCTTCAGCTCCTTCAAACTTCATCACCTTCAACTCTCCCTCCTTCCCTGCTACCCTCTCGCTCACGCTCAGCTTCGTTCCCAATGTCAAAGGATTGCTGCCACAGAGGGCTCTGGAAAGATCAATTCGCTATGGATCCGTAATTTGCATGGCCAAAAGATATGCTCCTGACACTACAAAGAGAAAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGCCAAGAAAAAGAAGACAAGGAGGAAAGGGGGAAGGAAAGATTTCAAAATAGTCAGGCTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAGATTGAGGTCCAGAAATATGACCCTATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGA

Coding sequence (CDS)

ATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGACGCTTTCTTGTGGAAAAAGGAATCAATTTCTCAGTAATTCTTCCTCTTCAGCTCCTTCAAACTTCATCACCTTCAACTCTCCCTCCTTCCCTGCTACCCTCTCGCTCACGCTCAGCTTCGTTCCCAATGTCAAAGGATTGCTGCCACAGAGGGCTCTGGAAAGATCAATTCGCTATGGATCCGTAATTTGCATGGCCAAAAGATATGCTCCTGACACTACAAAGAGAAAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGCCAAGAAAAAGAAGACAAGGAGGAAAGGGGGAAGGAAAGATTTCAAAATAGTCAGGCTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAGATTGAGGTCCAGAAATATGACCCTATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGA

Protein sequence

MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK*

Homology

[Close]

BLAST of MELO3C019403 vs. Swiss-Prot
Match: RL33_RHOCS (50S ribosomal protein L33 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rpmG PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-07
Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 1


Query: 116 IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK 161
           +++L S+A TGFFY KKK+ RK  +K+E +KYDP+A +HV+F E K
Sbjct: 8   LIKLVSSADTGFFYVKKKNPRKTTEKLEFKKYDPVARKHVVFKEAK 53

[Close]

BLAST of MELO3C019403 vs. Swiss-Prot
Match: RL33_EHRRG (50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Gardel) GN=rpmG PE=3 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 4.9e-07
Identity = 24/46 (52.17%), Postives = 36/46 (78.26%), Query Frame = 1


Query: 116 IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK 161
           +V+L+S+A TG+FY KK++ +K+ +K+  +KYDP+A +HVLFTE K
Sbjct: 9   LVKLASSAGTGYFYVKKRNPKKLINKLSFRKYDPVARKHVLFTEEK 54

[Close]

BLAST of MELO3C019403 vs. Swiss-Prot
Match: RL33_EHRRW (50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Welgevonden) GN=rpmG PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.9e-07
Identity = 24/46 (52.17%), Postives = 36/46 (78.26%), Query Frame = 1


Query: 116 IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK 161
           +V+L+S+A TG+FY KK++ +K+ +K+  +KYDP+A +HVLFTE K
Sbjct: 9   LVKLASSAGTGYFYVKKRNPKKLINKLSFRKYDPVARKHVLFTEEK 54

[Close]

BLAST of MELO3C019403 vs. Swiss-Prot
Match: RL33_EHRCJ (50S ribosomal protein L33 OS=Ehrlichia canis (strain Jake) GN=rpmG PE=3 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 6.4e-07
Identity = 23/46 (50.00%), Postives = 36/46 (78.26%), Query Frame = 1


Query: 116 IVRLSSTARTGFFYAKKKS-RKMADKIEVQKYDPIANRHVLFTEVK 161
           +V+L+S+A+TGFFY KK++ +K+ +K+  +KYDP+  +HVLF+E K
Sbjct: 9   LVKLASSAKTGFFYVKKRNPKKLINKLSFRKYDPVVRKHVLFSEEK 54

[Close]

BLAST of MELO3C019403 vs. Swiss-Prot
Match: RL33_MAGSA (50S ribosomal protein L33 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rpmG PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-06
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 1


Query: 116 IVRLSSTARTGFFY-AKKKSRKMADKIEVQKYDPIANRHVLFTEVK 161
           +++L STA TGFFY AKK  RK  +K+E +KYDP+  +HV F E K
Sbjct: 8   LIKLLSTAGTGFFYVAKKNPRKTTEKLEFRKYDPVVRKHVQFKEAK 53

[Close]

BLAST of MELO3C019403 vs. TrEMBL
Match: A0A0A0LAF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G234020 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.8e-72
Identity = 146/173 (84.39%), Postives = 152/173 (87.86%), Query Frame = 1


Query: 1   MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKG-- 60
           M TTIQRFCLDLTLSCG RN FLS+SSSS PSNFITFNSPSF ATLSLTL+F+PN+KG  
Sbjct: 1   MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGIS 60

Query: 61  -----------LLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRR 120
                      LL QRALERSIRY SVICMAKRYAP+TTKRKRLSRKRGGDPAKKKKTRR
Sbjct: 61  QHEKDRESRMRLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPAKKKKTRR 120

Query: 121 KGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 161
           KGG KDFKIVRLSSTARTGFFYAKKKSRK+ADKIEVQKYDPIANRHVLFTEVK
Sbjct: 121 KGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK 173

[Close]

BLAST of MELO3C019403 vs. TrEMBL
Match: A0A061F8Q7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031611 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.3e-24
Identity = 79/176 (44.89%), Postives = 101/176 (57.39%), Query Frame = 1


Query: 1   MATTIQRFCLDLTLSCGKRNQFLSNSSSS----APSNFITFNSPSFPATLSLTLSFVPNV 60
           MAT+      DL  +C  RN  L+N  S     APS      SPSF A LS +       
Sbjct: 1   MATSAISSLFDLAYACQPRNLQLNNFPSCHLKLAPSR-----SPSFTANLSHSFFS---- 60

Query: 61  KGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGG------ 120
           KG L     +RS  Y +V+ MA+RYA +++ RK+LSRK+GGD  KK K RRK        
Sbjct: 61  KGCLSMTTFQRSYHY-TVVGMARRYASNSSLRKKLSRKKGGDRGKKNKRRRKRTNKRKGR 120

Query: 121 ------RKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 161
                 RK+FK+VRL S A TG FYAKKKSR++ +K++ +KYDP   +HVLF EVK
Sbjct: 121 EGKKKKRKEFKVVRLVSAAGTGVFYAKKKSRQIKEKLKFRKYDPQVKQHVLFEEVK 166

[Close]

BLAST of MELO3C019403 vs. TrEMBL
Match: A0A059BNX9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01166 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.9e-19
Identity = 49/88 (55.68%), Postives = 65/88 (73.86%), Query Frame = 1


Query: 73  SVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGGR--KDFKIVRLSSTARTGFFYA 132
           S++CM+ RYAPD+T RK+ +RKRGGDP KK+K RRK  R  K  K++ L STA TGF YA
Sbjct: 62  SLVCMSYRYAPDSTLRKKKARKRGGDPGKKRKARRKSKRSKKSVKVINLLSTAGTGFSYA 121

Query: 133 KKKSRKMADKIEVQKYDPIANRHVLFTE 159
           K +S +  DK++ +KYDP+  +HVLF E
Sbjct: 122 KTRSVQSKDKLKCRKYDPVLRQHVLFQE 149

[Close]

BLAST of MELO3C019403 vs. TrEMBL
Match: U5GTB0_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0001s40710g PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-11
Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 1


Query: 92  SRKRGGDPAKKKKTRRKGGRKD---FKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDP 151
           SR++GGD  KKKK RRK  RK+   FKI+RL S A TG+ YAK+K ++ ++K+E++KYDP
Sbjct: 3   SRRKGGDREKKKKRRRKAARKNKDSFKIIRLVSAAGTGYVYAKRKGKR-SEKLEIKKYDP 62

Query: 152 IANRHVLFTEVK 161
           +   HV F E K
Sbjct: 63  VVKHHVFFKESK 73

[Close]

BLAST of MELO3C019403 vs. TrEMBL
Match: V7AGZ5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G128100g PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.2e-09
Identity = 57/165 (34.55%), Postives = 74/165 (44.85%), Query Frame = 1


Query: 1   MATTIQRFCLDLTLSCGKRNQFLS-----NSSSSAPSNFITFNSPSFPATLSLTLSFVPN 60
           MA+        LT+SCGK N F +     +SS+   SNF  FNS S     S        
Sbjct: 1   MASATTHVFSGLTVSCGKGNSFFNFNHSPSSSTLLSSNFRPFNSFSTNGLFS-------- 60

Query: 61  VKGLLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGGRKDFK 120
            +  L +    R  R   V+CMA                              G +K  K
Sbjct: 61  -RDYLSKDMFCRPTR-SPVVCMA------------------------------GSKKKSK 120

Query: 121 IVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 161
           ++RL STA TGFFYA KKS+K  +K+E++KYDP   RHV+F E K
Sbjct: 121 VIRLVSTAGTGFFYAIKKSKK-NEKLELKKYDPKVKRHVVFKESK 124

[Close]

BLAST of MELO3C019403 vs. TAIR10
Match: AT3G06320.1 (AT3G06320.1 Ribosomal protein L33 family protein)

HSP 1 Score: 61.6 bits (148), Expect = 5.1e-10
Identity = 30/51 (58.82%), Postives = 35/51 (68.63%), Query Frame = 1


Query: 111 RKDFKIVRLSSTARTGFFYAKKKSRK-MADKIEVQKYDPIANRHVLFTEVK 161
           +K F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Sbjct: 6   KKTFMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQK 56

[Close]

BLAST of MELO3C019403 vs. TAIR10
Match: AT5G18790.1 (AT5G18790.1 Ribosomal protein L33 family protein)

HSP 1 Score: 61.6 bits (148), Expect = 5.1e-10
Identity = 30/51 (58.82%), Postives = 35/51 (68.63%), Query Frame = 1


Query: 111 RKDFKIVRLSSTARTGFFYAKKKSRK-MADKIEVQKYDPIANRHVLFTEVK 161
           +K F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Sbjct: 6   KKTFMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQK 56

[Close]

BLAST of MELO3C019403 vs. NCBI nr
Match: gi|659112008|ref|XP_008456021.1| (PREDICTED: uncharacterized protein LOC103496073 [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 8.5e-84
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1


Query: 1   MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLL 60
           MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLL
Sbjct: 1   MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLL 60

Query: 61  PQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGGRKDFKIVRLS 120
           PQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGGRKDFKIVRLS
Sbjct: 61  PQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGGRKDFKIVRLS 120

Query: 121 STARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 161
           STARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK
Sbjct: 121 STARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 160

[Close]

BLAST of MELO3C019403 vs. NCBI nr
Match: gi|778680352|ref|XP_011651295.1| (PREDICTED: uncharacterized protein LOC105434866 isoform X2 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 4.2e-75
Identity = 146/160 (91.25%), Postives = 152/160 (95.00%), Query Frame = 1


Query: 1   MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLL 60
           M TTIQRFCLDLTLSCG RN FLS+SSSS PSNFITFNSPSF ATLSLTL+F+PN+KGLL
Sbjct: 1   MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLL 60

Query: 61  PQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGGRKDFKIVRLS 120
            QRALERSIRY SVICMAKRYAP+TTKRKRLSRKRGGDPAKKKKTRRKGG KDFKIVRLS
Sbjct: 61  SQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPAKKKKTRRKGGGKDFKIVRLS 120

Query: 121 STARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 161
           STARTGFFYAKKKSRK+ADKIEVQKYDPIANRHVLFTEVK
Sbjct: 121 STARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK 160

[Close]

BLAST of MELO3C019403 vs. NCBI nr
Match: gi|778680349|ref|XP_011651294.1| (PREDICTED: uncharacterized protein LOC105434866 isoform X1 [Cucumis sativus])

HSP 1 Score: 280.0 bits (715), Expect = 2.6e-72
Identity = 146/173 (84.39%), Postives = 152/173 (87.86%), Query Frame = 1


Query: 1   MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKG-- 60
           M TTIQRFCLDLTLSCG RN FLS+SSSS PSNFITFNSPSF ATLSLTL+F+PN+KG  
Sbjct: 1   MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGIS 60

Query: 61  -----------LLPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRR 120
                      LL QRALERSIRY SVICMAKRYAP+TTKRKRLSRKRGGDPAKKKKTRR
Sbjct: 61  QHEKDRESRMRLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPAKKKKTRR 120

Query: 121 KGGRKDFKIVRLSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 161
           KGG KDFKIVRLSSTARTGFFYAKKKSRK+ADKIEVQKYDPIANRHVLFTEVK
Sbjct: 121 KGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK 173

[Close]

BLAST of MELO3C019403 vs. NCBI nr
Match: gi|1012224651|ref|XP_015936678.1| (PREDICTED: uncharacterized protein LOC107462582 [Arachis duranensis])

HSP 1 Score: 129.8 bits (325), Expect = 4.3e-27
Identity = 83/162 (51.23%), Postives = 99/162 (61.11%), Query Frame = 1


Query: 2   ATTIQRFC--LDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGL 61
           A  I  FC    LTLSC KRN+F          + + F+S S        LS     +G 
Sbjct: 4   AIAIAHFCPGRGLTLSCYKRNRF--------HLHHLRFSSTS--------LSHAVFSRGY 63

Query: 62  LPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGGRKD-FKIVR 121
           L      R  +   +ICMAKRYAP+TTKRKRLSRKRGGDP KK+  RRKG +K  FKI+R
Sbjct: 64  LSTEMFTRP-KVHPIICMAKRYAPNTTKRKRLSRKRGGDPDKKRHRRRKGSKKKLFKIIR 123

Query: 122 LSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 161
           L S A TGFFYAKKKSR++  KI+++KYDP    HVLFTE K
Sbjct: 124 LVSAAGTGFFYAKKKSRRI-HKIDLKKYDPKVKLHVLFTEAK 147

[Close]

BLAST of MELO3C019403 vs. NCBI nr
Match: gi|1021556407|ref|XP_016169566.1| (PREDICTED: uncharacterized protein LOC107612311 [Arachis ipaensis])

HSP 1 Score: 129.4 bits (324), Expect = 5.6e-27
Identity = 83/162 (51.23%), Postives = 99/162 (61.11%), Query Frame = 1


Query: 2   ATTIQRFC--LDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGL 61
           A  I  FC    LTLSC KRN+F          + + F+S S        LS     +G 
Sbjct: 4   AIAIAHFCPGRGLTLSCYKRNRF--------HLHHLHFSSTS--------LSHAVFSRGY 63

Query: 62  LPQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGGRKD-FKIVR 121
           L      R  +   +ICMAKRYAP+TTKRKRLSRKRGGDP KK+  RRKG +K  FKI+R
Sbjct: 64  LSTEMFTRP-KVHPIICMAKRYAPNTTKRKRLSRKRGGDPDKKRHRRRKGSKKKLFKIIR 123

Query: 122 LSSTARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 161
           L S A TGFFYAKKKSR++  KI+++KYDP    HVLFTE K
Sbjct: 124 LVSAAGTGFFYAKKKSRRI-HKIDLKKYDPKVKLHVLFTEAK 147

The following BLAST results are available for this feature:

BLAST of MELO3C019403 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL33_RHOCS	2.9e-07	54.35	50S ribosomal protein L33 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN...	[more]
RL33_EHRRG	4.9e-07	52.17	50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Gardel) GN=rpmG PE=3 ...	[more]
RL33_EHRRW	4.9e-07	52.17	50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Welgevonden) GN=rpmG ...	[more]
RL33_EHRCJ	6.4e-07	50.00	50S ribosomal protein L33 OS=Ehrlichia canis (strain Jake) GN=rpmG PE=3 SV=2	[more]
RL33_MAGSA	1.4e-06	54.35	50S ribosomal protein L33 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 70...	[more]

BLAST of MELO3C019403 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAF8_CUCSA	1.8e-72	84.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G234020 PE=4 SV=1	[more]
A0A061F8Q7_THECC	5.3e-24	44.89	Uncharacterized protein OS=Theobroma cacao GN=TCM_031611 PE=4 SV=1	[more]
A0A059BNX9_EUCGR	3.9e-19	55.68	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01166 PE=4 SV=1	[more]
U5GTB0_POPTR	1.3e-11	52.78	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0001s40710g P...	[more]
V7AGZ5_PHAVU	8.2e-09	34.55	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G128100g PE=3 SV=1	[more]

BLAST of MELO3C019403 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G06320.1	5.1e-10	58.82	Ribosomal protein L33 family protein	[more]
AT5G18790.1	5.1e-10	58.82	Ribosomal protein L33 family protein	[more]

BLAST of MELO3C019403 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112008\|ref\|XP_008456021.1\|	8.5e-84	100.00	PREDICTED: uncharacterized protein LOC103496073 [Cucumis melo]	[more]
gi\|778680352\|ref\|XP_011651295.1\|	4.2e-75	91.25	PREDICTED: uncharacterized protein LOC105434866 isoform X2 [Cucumis sativus]	[more]
gi\|778680349\|ref\|XP_011651294.1\|	2.6e-72	84.39	PREDICTED: uncharacterized protein LOC105434866 isoform X1 [Cucumis sativus]	[more]
gi\|1012224651\|ref\|XP_015936678.1\|	4.3e-27	51.23	PREDICTED: uncharacterized protein LOC107462582 [Arachis duranensis]	[more]
gi\|1021556407\|ref\|XP_016169566.1\|	5.6e-27	51.23	PREDICTED: uncharacterized protein LOC107612311 [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001705	Ribosomal_L33
IPR011332	Ribosomal_zn-bd
IPR018264	Ribosomal_L33_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019403T1	MELO3C019403T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001705	Ribosomal protein L33	PFAM	PF00471	Ribosomal_L33	coord: 116..160 score: 1.
IPR001705	Ribosomal protein L33	TIGRFAMs	TIGR01023	TIGR01023	coord: 111..160 score: 3.3
IPR011332	Zinc-binding ribosomal protein	unknown	SSF57829	Zn-binding ribosomal proteins	coord: 115..160 score: 4.21
IPR018264	Ribosomal protein L33, conserved site	PROSITE	PS00582	RIBOSOMAL_L33	coord: 129..147 scor
None	No IPR available	PANTHER	PTHR15238	FAMILY NOT NAMED	coord: 116..160 score: 3.4
None	No IPR available	PANTHER	PTHR15238:SF1	39S RIBOSOMAL PROTEIN L33, MITOCHONDRIAL	coord: 116..160 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C019403	Csa3G234020	Cucumber (Chinese Long) v2	cumeB166
MELO3C019403	Cla004291	Watermelon (97103) v1	mewmB461
MELO3C019403	ClCG05G009260	Watermelon (Charleston Gray)	mewcgB427
MELO3C019403	Cla97C05G091590	Watermelon (97103) v2	mewmbB434
MELO3C019403	Bhi01G001155	Wax gourd	mewgoB530
MELO3C019403	CSPI03G19460	Wild cucumber (PI 183967)	cpimeB241
MELO3C019403	CmaCh16G004030	Cucurbita maxima (Rimu)	cmameB298
MELO3C019403	CmoCh16G004370	Cucurbita moschata (Rifu)	cmomeB290
MELO3C019403	Lsi05G001360	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C019403	CsGy3G019400	Cucumber (Gy14) v2	cgybmeB210
MELO3C019403	Carg11336	Silver-seed gourd	carmeB0651
MELO3C019403	CsaV3_3G019510	Cucumber (Chinese Long) v3	cucmeB247

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019403	Silver-seed gourd	carmeB0041
MELO3C019403	Cucumber (Gy14) v1	cgymeB002
MELO3C019403	Cucurbita maxima (Rimu)	cmameB691
MELO3C019403	Cucurbita moschata (Rifu)	cmomeB683
MELO3C019403	Cucurbita pepo (Zucchini)	cpemeB192
MELO3C019403	Cucurbita pepo (Zucchini)	cpemeB412