Cla97C05G091590 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G091590
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Ribosomal protein L33 family protein
Location	Cla97Chr05 : 9534292 .. 9535492 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGGCGCTTTCTTGTGGAAAAAGGAACCGATTTCTCAGTGTTTCTGCGTCTTCAGCTCCTTCAAACTTCGTCACTTTCAACTCTCTCTCCTTCTTTGCTGCCCTCTCGCTGAGCGTCCGGAACAATGTCAAAGGTAATTGCGAACATTTCATCCAAAATCATCATCATAAATCCGTTCATCATAGCTCTCTTTAATCCTTTTTTTTTAATATATATGAAAATCACAATCAAGAGACATGAAATAACGGGAATCAAGAGTGAGTATCATAATCGAGAATCTCTGCTGGGGAGAATTTTGTTTGGTGGGGTTTGTTTGAAGTTTTTTTCTAACGAACTAAACAAAAGCAGGAGAAATTTAACATTTGGGGGCCTGTCGAAATTTTCAGGATCGTTGTCACAGAGGGCTCGGGAGAGATCAATTCGTTATGGATCCGTAATTTGTATGGCCAAAAGATATGCTCCTGAAACTACAAAGAGGAAGGTACAAAACTATTATTAGTTAGTCGTTTCTGTTGATGATTGATTGGATCTGTATCTCGTTTTAGCTTCTATAGTGTGTGAATTATGATAGAAATTTGCAAATTGAGAGGACGGTGGTGGGTATTATATGTTTGTGCATGTATCTGTGTTTACCCCTTTTATGTTAACCTGTTTGATGTCCTTCAAAATTCCCACATTTTGCCTGGTATCAGTTCCATATGGTATAGAAAACATATATTTATCTGATTGAGTTTGTATCTTCGAAATGAGATGATGGTGAAAATCTGATAAATCTTCTGTAGGGATTATTCTGTATCGAAGTTTGGTACGTTTTCTGTTCTAACTTTAGTTTTTACAAGAATAGAAAAGTCACTGAGATTTGGGAACAATATTGTGTAATTTGTTCGATATGTTAATGTGTCTGTTGATTTGATCATGTAACCTACTGGTCGATTACATTCAAATGCAGAGGTTAAGTAGGAAGAGGGGTGGTGATCCAGACAAGAAAAAAAAGACAAGGAGAAAAGGGGGAAAGAAAGATTTCAAAATAGTCAGGCTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAGATTGAGCTCCAGAAATATGACCCTATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGA

mRNA sequence

ATGATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGGCGCTTTCTTGTGGAAAAAGGAACCGATTTCTCAGTGTTTCTGCGTCTTCAGCTCCTTCAAACTTCGTCACTTTCAACTCTCTCTCCTTCTTTGCTGCCCTCTCGCTGAGCGTCCGGAACAATGTCAAAGGATCGTTGTCACAGAGGGCTCGGGAGAGATCAATTCGTTATGGATCCGTAATTTGTATGGCCAAAAGATATGCTCCTGAAACTACAAAGAGGAAGAGGTTAAGTAGGAAGAGGGGTGGTGATCCAGACAAGAAAAAAAAGACAAGGAGAAAAGGGGGAAAGAAAGATTTCAAAATAGTCAGGCTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAGATTGAGCTCCAGAAATATGACCCTATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGA

Coding sequence (CDS)

ATGATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGGCGCTTTCTTGTGGAAAAAGGAACCGATTTCTCAGTGTTTCTGCGTCTTCAGCTCCTTCAAACTTCGTCACTTTCAACTCTCTCTCCTTCTTTGCTGCCCTCTCGCTGAGCGTCCGGAACAATGTCAAAGGATCGTTGTCACAGAGGGCTCGGGAGAGATCAATTCGTTATGGATCCGTAATTTGTATGGCCAAAAGATATGCTCCTGAAACTACAAAGAGGAAGAGGTTAAGTAGGAAGAGGGGTGGTGATCCAGACAAGAAAAAAAAGACAAGGAGAAAAGGGGGAAAGAAAGATTTCAAAATAGTCAGGCTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAGATTGAGCTCCAGAAATATGACCCTATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGA

Protein sequence

MMATTIQRFCLDLALSCGKRNRFLSVSASSAPSNFVTFNSLSFFAALSLSVRNNVKGSLSQRARERSIRYGSVICMAKRYAPETTKRKRLSRKRGGDPDKKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK

Homology

[Close]

BLAST of Cla97C05G091590 vs. NCBI nr
Match: XP_008456021.1 (PREDICTED: uncharacterized protein LOC103496073 [Cucumis melo])

HSP 1 Score: 212.2 bits (539), Expect = 1.3e-51
Identity = 137/160 (85.62%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 2   MATTIQRFCLDLALSCGKRNRFLSVSASSAPSNFVTFNSLSFFAALSLSVR--NNVKGSL 61
           MATTIQRFCLDL LSCGKRN+FLS S+SSAPSNF+TFNS SF A LSL++    NVKG L
Sbjct: 1   MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLL 60

Query: 62  SQRARERSIRYGSVICMAKRYAPETTKRKRXXXXXXXXXXXXXXXXXXXXXXXFKIVRLS 121
            QRA ERSIRYGSVICMAKRYAP+TTKRKR  XXXXXXXXXXXXXXXXXXX  FKIVRLS
Sbjct: 61  PQRALERSIRYGSVICMAKRYAPDTTKRKRLSXXXXXXXXXXXXXXXXXXXKDFKIVRLS 120

Query: 122 STARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK 160
           STARTGFFYAKKKSRKMADKIE+QKYDPIANRHVLFTEVK
Sbjct: 121 STARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 160

[Close]

BLAST of Cla97C05G091590 vs. NCBI nr
Match: XP_011651295.1 (PREDICTED: uncharacterized protein LOC105434866 isoform X2 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 134/160 (83.75%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 2   MATTIQRFCLDLALSCGKRNRFLSVSASSAPSNFVTFNSLSFFAALSLSVR--NNVKGSL 61
           M TTIQRFCLDL LSCG RN FLS S+SS PSNF+TFNS SF A LSL++    N+KG L
Sbjct: 1   MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLL 60

Query: 62  SQRARERSIRYGSVICMAKRYAPETTKRKRXXXXXXXXXXXXXXXXXXXXXXXFKIVRLS 121
           SQRA ERSIRY SVICMAKRYAPETTKR  XXXXXXXXXXXXXXXXXXXXXX FKIVRLS
Sbjct: 61  SQRALERSIRYESVICMAKRYAPETTKRXXXXXXXXXXXXXXXXXXXXXXXXDFKIVRLS 120

Query: 122 STARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK 160
           STARTGFFYAKKKSRK+ADKIE+QKYDPIANRHVLFTEVK
Sbjct: 121 STARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK 160

[Close]

BLAST of Cla97C05G091590 vs. NCBI nr
Match: XP_023552499.1 (uncharacterized protein LOC111810144 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 6.7e-45
Identity = 128/158 (81.01%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 2   MATTIQRFCLDLALSCGKRNRFLSVSASSAPSNFVTFNSLSFFAALSLSVRNNVKGSLSQ 61
           MA TI+R C D ALSCG+RNRFL  SASS P +FV+F  LSF AALSLSV  NVK SLSQ
Sbjct: 1   MAATIRRLCFDSALSCGERNRFLCDSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60

Query: 62  RARERSIRYGSVICMAKRYAPETTKRKRXXXXXXXXXXXXXXXXXXXXXXXFKIVRLSST 121
            ARERSIR+GSV CMAKRYAP TTKR  XXXXXXXXXXXXXXXXXXXXXX FKI+RLSST
Sbjct: 61  SARERSIRHGSVTCMAKRYAPNTTKRXXXXXXXXXXXXXXXXXXXXXXXXDFKIIRLSST 120

Query: 122 ARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK 160
           A TGFFYAKKKSRKMADKIELQK+DP+A RHVLFTEVK
Sbjct: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158

[Close]

BLAST of Cla97C05G091590 vs. NCBI nr
Match: XP_011651294.1 (PREDICTED: uncharacterized protein LOC105434866 isoform X1 [Cucumis sativus] >KGN57632.1 hypothetical protein Csa_3G234020 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 8.7e-45
Identity = 134/173 (77.46%), Postives = 141/173 (81.50%), Query Frame = 0


Query: 2   MATTIQRFCLDLALSCGKRNRFLSVSASSAPSNFVTFNSLSFFAALSLSVR--NNVKG-- 61
           M TTIQRFCLDL LSCG RN FLS S+SS PSNF+TFNS SF A LSL++    N+KG  
Sbjct: 1   MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGIS 60

Query: 62  -----------SLSQRARERSIRYGSVICMAKRYAPETTKRKRXXXXXXXXXXXXXXXXX 121
                       LSQRA ERSIRY SVICMAKRYAPETTKR  XXXXXXXXXXXXXXXXX
Sbjct: 61  QHEKDRESRMRLLSQRALERSIRYESVICMAKRYAPETTKRXXXXXXXXXXXXXXXXXXX 120

Query: 122 XXXXXXFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK 160
           XXXXX FKIVRLSSTARTGFFYAKKKSRK+ADKIE+QKYDPIANRHVLFTEVK
Sbjct: 121 XXXXXDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK 173

[Close]

BLAST of Cla97C05G091590 vs. NCBI nr
Match: XP_022984422.1 (uncharacterized protein LOC111482725 isoform X2 [Cucurbita maxima])

HSP 1 Score: 188.0 bits (476), Expect = 2.5e-44
Identity = 119/158 (75.32%), Postives = 128/158 (81.01%), Query Frame = 0


Query: 2   MATTIQRFCLDLALSCGKRNRFLSVSASSAPSNFVTFNSLSFFAALSLSVRNNVKGSLSQ 61
           MA TI+R CL  AL CG+RNRFL  SASS P +FV+F  LSF AALSL V  NVK SLSQ
Sbjct: 1   MAATIRRLCLGSALFCGERNRFLCDSASSTPPSFVSFKCLSFSAALSLLVVPNVKESLSQ 60

Query: 62  RARERSIRYGSVICMAKRYAPETTKRKRXXXXXXXXXXXXXXXXXXXXXXXFKIVRLSST 121
            ARERSIR+GSVICMA+RYAP TTKRKR       XXXXXXXXXXXXXX  FKI+RLSST
Sbjct: 61  SARERSIRHGSVICMARRYAPNTTKRKRLSRKRGGXXXXXXXXXXXXXXKDFKIIRLSST 120

Query: 122 ARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK 160
           A TGFFYAKKKSRKMADKIELQK+DP+A RHVLFTE K
Sbjct: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEAK 158

[Close]

BLAST of Cla97C05G091590 vs. TrEMBL
Match: tr|A0A1S3C284|A0A1S3C284_CUCME (uncharacterized protein LOC103496073 OS=Cucumis melo OX=3656 GN=LOC103496073 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.3e-52
Identity = 137/160 (85.62%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 2   MATTIQRFCLDLALSCGKRNRFLSVSASSAPSNFVTFNSLSFFAALSLSVR--NNVKGSL 61
           MATTIQRFCLDL LSCGKRN+FLS S+SSAPSNF+TFNS SF A LSL++    NVKG L
Sbjct: 1   MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLL 60

Query: 62  SQRARERSIRYGSVICMAKRYAPETTKRKRXXXXXXXXXXXXXXXXXXXXXXXFKIVRLS 121
            QRA ERSIRYGSVICMAKRYAP+TTKRKR  XXXXXXXXXXXXXXXXXXX  FKIVRLS
Sbjct: 61  PQRALERSIRYGSVICMAKRYAPDTTKRKRLSXXXXXXXXXXXXXXXXXXXKDFKIVRLS 120

Query: 122 STARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK 160
           STARTGFFYAKKKSRKMADKIE+QKYDPIANRHVLFTEVK
Sbjct: 121 STARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 160

[Close]

BLAST of Cla97C05G091590 vs. TrEMBL
Match: tr|A0A0A0LAF8|A0A0A0LAF8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G234020 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.8e-45
Identity = 134/173 (77.46%), Postives = 141/173 (81.50%), Query Frame = 0


Query: 2   MATTIQRFCLDLALSCGKRNRFLSVSASSAPSNFVTFNSLSFFAALSLSVR--NNVKG-- 61
           M TTIQRFCLDL LSCG RN FLS S+SS PSNF+TFNS SF A LSL++    N+KG  
Sbjct: 1   MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGIS 60

Query: 62  -----------SLSQRARERSIRYGSVICMAKRYAPETTKRKRXXXXXXXXXXXXXXXXX 121
                       LSQRA ERSIRY SVICMAKRYAPETTKR  XXXXXXXXXXXXXXXXX
Sbjct: 61  QHEKDRESRMRLLSQRALERSIRYESVICMAKRYAPETTKRXXXXXXXXXXXXXXXXXXX 120

Query: 122 XXXXXXFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK 160
           XXXXX FKIVRLSSTARTGFFYAKKKSRK+ADKIE+QKYDPIANRHVLFTEVK
Sbjct: 121 XXXXXDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK 173

[Close]

BLAST of Cla97C05G091590 vs. TrEMBL
Match: tr|A0A2K2CB05|A0A2K2CB05_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G396700v3 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 8.7e-09
Identity = 77/151 (50.99%), Postives = 92/151 (60.93%), Query Frame = 0


Query: 13  LALSCGKRNRFLSVSAS-SAPSNFVTFNSLSFFAALSLSVRNNVKGSLSQRARERSIRYG 72
           L L C  RN  L+ + S S+     T   LS   +  L      KG LS    ERSIR  
Sbjct: 10  LTLPCMPRNPSLTTNLSLSSHLKLATSRPLSNLLSHGLF----SKGFLSINTIERSIRQ- 69

Query: 73  SVICMAKRYAPETTKRK---RXXXXXXXXXXXXXXXXXXXXXXXFKIVRLSSTARTGFFY 132
           SV+CMA+RY   T KRK    XXXXXXXXXXXXXXXXXXXX   FKI+RL S A TG+ Y
Sbjct: 70  SVVCMARRYGANTRKRKIQXXXXXXXXXXXXXXXXXXXXXXKDSFKIIRLVSAAGTGYVY 129

Query: 133 AKKKSRKMADKIELQKYDPIANRHVLFTEVK 160
           AK+K  K ++K+E++KYDP+   HV F E K
Sbjct: 130 AKRKG-KRSEKLEIKKYDPVVKHHVFFKESK 154

[Close]

BLAST of Cla97C05G091590 vs. TrEMBL
Match: tr|A0A061F8Q7|A0A061F8Q7_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_031611 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.3e-07
Identity = 75/174 (43.10%), Postives = 92/174 (52.87%), Query Frame = 0


Query: 2   MATTIQRFCLDLALSCGKR----NRFLSVSASSAPSNFVTFNSLSFFAALSLSVRNNVKG 61
           MAT+      DLA +C  R    N F S     APS      S SF A LS S  +  KG
Sbjct: 1   MATSAISSLFDLAYACQPRNLQLNNFPSCHLKLAPS-----RSPSFTANLSHSFFS--KG 60

Query: 62  SLSQRARERSIRYGSVICMAKRYAPETTKRKRXXXXXXXXXXXXXXXXXXXXXXXFKIVR 121
            LS    +RS  Y +V+ MA+RYA  ++ RK+        XXXXXXXXXXXXXXX     
Sbjct: 61  CLSMTTFQRSYHY-TVVGMARRYASNSSLRKKLSRKKGGDXXXXXXXXXXXXXXXXXXXX 120

Query: 122 LS------------STARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK 160
                         S A TG FYAKKKSR++ +K++ +KYDP   +HVLF EVK
Sbjct: 121 XXXXXXXXXXXXXVSAAGTGVFYAKKKSRQIKEKLKFRKYDPQVKQHVLFEEVK 166

[Close]

BLAST of Cla97C05G091590 vs. TrEMBL
Match: tr|A0A067L6B4|A0A067L6B4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02043 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.3e-07
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 113 FKIVRLSSTARTGFFYAKKK-SRKMADKIELQKYDPIANRHVLFTEVK 160
           F  +RL S A TGFFY K+K S+K+A+K+E +KYDP  NRHVLFTE K
Sbjct: 9   FMFIRLVSAAGTGFFYVKRKSSKKLAEKLEFRKYDPRVNRHVLFTEAK 56

[Close]

BLAST of Cla97C05G091590 vs. Swiss-Prot
Match: sp|B6IN38|RL33_RHOCS (50S ribosomal protein L33 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=rpmG PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-07
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 0


Query: 115 IVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK 160
           +++L S+A TGFFY KKK+ RK  +K+E +KYDP+A +HV+F E K
Sbjct: 8   LIKLVSSADTGFFYVKKKNPRKTTEKLEFKKYDPVARKHVVFKEAK 53

[Close]

BLAST of Cla97C05G091590 vs. Swiss-Prot
Match: sp|Q5FFJ4|RL33_EHRRG (50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Gardel) OX=302409 GN=rpmG PE=3 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 4.9e-07
Identity = 24/46 (52.17%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 115 IVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK 160
           +V+L+S+A TG+FY KK++ +K+ +K+  +KYDP+A +HVLFTE K
Sbjct: 9   LVKLASSAGTGYFYVKKRNPKKLINKLSFRKYDPVARKHVLFTEEK 54

[Close]

BLAST of Cla97C05G091590 vs. Swiss-Prot
Match: sp|Q5HBV6|RL33_EHRRW (50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Welgevonden) OX=254945 GN=rpmG PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.9e-07
Identity = 24/46 (52.17%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 115 IVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK 160
           +V+L+S+A TG+FY KK++ +K+ +K+  +KYDP+A +HVLFTE K
Sbjct: 9   LVKLASSAGTGYFYVKKRNPKKLINKLSFRKYDPVARKHVLFTEEK 54

[Close]

BLAST of Cla97C05G091590 vs. Swiss-Prot
Match: sp|Q3YSN4|RL33_EHRCJ (50S ribosomal protein L33 OS=Ehrlichia canis (strain Jake) OX=269484 GN=rpmG PE=3 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 6.4e-07
Identity = 23/46 (50.00%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 115 IVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK 160
           +V+L+S+A+TGFFY KK++ +K+ +K+  +KYDP+  +HVLF+E K
Sbjct: 9   LVKLASSAKTGFFYVKKRNPKKLINKLSFRKYDPVVRKHVLFSEEK 54

[Close]

BLAST of Cla97C05G091590 vs. Swiss-Prot
Match: sp|Q2W1A2|RL33_MAGSA (50S ribosomal protein L33 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rpmG PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-06
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 115 IVRLSSTARTGFFY-AKKKSRKMADKIELQKYDPIANRHVLFTEVK 160
           +++L STA TGFFY AKK  RK  +K+E +KYDP+  +HV F E K
Sbjct: 8   LIKLLSTAGTGFFYVAKKNPRKTTEKLEFRKYDPVVRKHVQFKEAK 53

[Close]

BLAST of Cla97C05G091590 vs. TAIR10
Match: AT3G06320.1 (Ribosomal protein L33 family protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 113 FKIVRLSSTARTGFFYAKKKSRK-MADKIELQKYDPIANRHVLFTEVK 160
           F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Sbjct: 9   FMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQK 56

[Close]

BLAST of Cla97C05G091590 vs. TAIR10
Match: AT5G18790.1 (Ribosomal protein L33 family protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 113 FKIVRLSSTARTGFFYAKKKSRK-MADKIELQKYDPIANRHVLFTEVK 160
           F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Sbjct: 9   FMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQK 56

The following BLAST results are available for this feature:

BLAST of Cla97C05G091590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456021.1	1.3e-51	85.63	PREDICTED: uncharacterized protein LOC103496073 [Cucumis melo]	[more]
XP_011651295.1	1.4e-47	83.75	PREDICTED: uncharacterized protein LOC105434866 isoform X2 [Cucumis sativus]	[more]
XP_023552499.1	6.7e-45	81.01	uncharacterized protein LOC111810144 [Cucurbita pepo subsp. pepo]	[more]
XP_011651294.1	8.7e-45	77.46	PREDICTED: uncharacterized protein LOC105434866 isoform X1 [Cucumis sativus] >KG...	[more]
XP_022984422.1	2.5e-44	75.32	uncharacterized protein LOC111482725 isoform X2 [Cucurbita maxima]	[more]

BLAST of Cla97C05G091590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C284\|A0A1S3C284_CUCME	8.3e-52	85.63	uncharacterized protein LOC103496073 OS=Cucumis melo OX=3656 GN=LOC103496073 PE=...	[more]
tr\|A0A0A0LAF8\|A0A0A0LAF8_CUCSA	5.8e-45	77.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G234020 PE=4 SV=1	[more]
tr\|A0A2K2CB05\|A0A2K2CB05_POPTR	8.7e-09	50.99	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G396700v3 PE=...	[more]
tr\|A0A061F8Q7\|A0A061F8Q7_THECC	6.3e-07	43.10	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_031611 PE=4 SV=1	[more]
tr\|A0A067L6B4\|A0A067L6B4_JATCU	6.3e-07	62.50	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02043 PE=3 SV=1	[more]

BLAST of Cla97C05G091590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B6IN38\|RL33_RHOCS	2.9e-07	54.35	50S ribosomal protein L33 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX...	[more]
sp\|Q5FFJ4\|RL33_EHRRG	4.9e-07	52.17	50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Gardel) OX=302409 GN=...	[more]
sp\|Q5HBV6\|RL33_EHRRW	4.9e-07	52.17	50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Welgevonden) OX=25494...	[more]
sp\|Q3YSN4\|RL33_EHRCJ	6.4e-07	50.00	50S ribosomal protein L33 OS=Ehrlichia canis (strain Jake) OX=269484 GN=rpmG PE=...	[more]
sp\|Q2W1A2\|RL33_MAGSA	1.4e-06	54.35	50S ribosomal protein L33 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 70...	[more]

BLAST of Cla97C05G091590 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G06320.1	2.5e-09	60.42	Ribosomal protein L33 family protein	[more]
AT5G18790.1	2.5e-09	60.42	Ribosomal protein L33 family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR011332	Ribosomal_zn-bd
IPR018264	Ribosomal_L33_CS
IPR038584	L33_sf
IPR001705	Ribosomal_L33

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0000027	ribosomal large subunit assembly
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G091590.1	Cla97C05G091590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001705	Ribosomal protein L33	PFAM	PF00471	Ribosomal_L33	coord: 115..159 e-value: 3.5E-10 score: 40.1
IPR001705	Ribosomal protein L33	TIGRFAM	TIGR01023	TIGR01023	coord: 110..159 e-value: 1.7E-13 score: 48.7
IPR038584	Ribosomal protein L33 superfamily	GENE3D	G3DSA:2.20.28.120		coord: 108..159 e-value: 6.7E-19 score: 69.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..111
None	No IPR available	PANTHER	PTHR15238	FAMILY NOT NAMED	coord: 110..159
IPR018264	Ribosomal protein L33, conserved site	PROSITE	PS00582	RIBOSOMAL_L33	coord: 128..146
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	SSF57829	Zn-binding ribosomal proteins	coord: 111..159

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G091590	Cla004291	Watermelon (97103) v1	wmwmbB206
Cla97C05G091590	Csa3G234020	Cucumber (Chinese Long) v2	cuwmbB215
Cla97C05G091590	MELO3C019403	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G091590	ClCG05G009260	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G091590	CSPI03G19460	Wild cucumber (PI 183967)	cpiwmbB221
Cla97C05G091590	CmaCh16G004030	Cucurbita maxima (Rimu)	cmawmbB347
Cla97C05G091590	CmoCh16G004370	Cucurbita moschata (Rifu)	cmowmbB332
Cla97C05G091590	Lsi05G001360	Bottle gourd (USVL1VR-Ls)	lsiwmbB329
Cla97C05G091590	CsGy3G019400	Cucumber (Gy14) v2	cgybwmbB206
Cla97C05G091590	MELO3C019403.2	Melon (DHL92) v3.6.1	medwmbB424
Cla97C05G091590	Carg11336	Silver-seed gourd	carwmbB0681
Cla97C05G091590	Bhi01G001155	Wax gourd	wgowmbB179

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G091590	Silver-seed gourd	carwmbB0042
Cla97C05G091590	Cucumber (Gy14) v1	cgywmbB003
Cla97C05G091590	Cucurbita maxima (Rimu)	cmawmbB763
Cla97C05G091590	Cucurbita moschata (Rifu)	cmowmbB735
Cla97C05G091590	Cucumber (Chinese Long) v3	cucwmbB217