MELO3C005940 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005940
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ethylene-responsive transcription factor 13
Location	chr6 : 92897 .. 93307 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCGTGGAGGGAGTCTGATGTGTTGGAGTCGATCCGTCAGCATCTTCTGAAAGAAAACTTAAACAAGAGTGGAGATGGGGATGGGGATGGGATTTTTAGTATTATTCAGGATCATCATTATAAAGCGGCGGCGGTGGAGAAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAACGGAGCGAGAACGTGGCTGGGGACCTTTGAAACGGCCCAAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCAAAACTCAACTTTCCACACCTCATTGATTCTGCTTCTACATATTCTACTTCTGCTTCTACTTCGTCTACTAAGCGTCCTCCAAGTCCTACCCACGCCGACCATTAA

mRNA sequence

ATGTCGTCGTGGAGGGAGTCTGATGTGTTGGAGTCGATCCGTCAGCATCTTCTGAAAGAAAACTTAAACAAGAGTGGAGATGGGGATGGGGATGGGATTTTTAGTATTATTCAGGATCATCATTATAAAGCGGCGGCGGTGGAGAAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAACGGAGCGAGAACGTGGCTGGGGACCTTTGAAACGGCCCAAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCAAAACTCAACTTTCCACACCTCATTGATTCTGCTTCTACATATTCTACTTCTGCTTCTACTTCGTCTACTAAGCGTCCTCCAAGTCCTACCCACGCCGACCATTAA

Coding sequence (CDS)

ATGTCGTCGTGGAGGGAGTCTGATGTGTTGGAGTCGATCCGTCAGCATCTTCTGAAAGAAAACTTAAACAAGAGTGGAGATGGGGATGGGGATGGGATTTTTAGTATTATTCAGGATCATCATTATAAAGCGGCGGCGGTGGAGAAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAACGGAGCGAGAACGTGGCTGGGGACCTTTGAAACGGCCCAAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCAAAACTCAACTTTCCACACCTCATTGATTCTGCTTCTACATATTCTACTTCTGCTTCTACTTCGTCTACTAAGCGTCCTCCAAGTCCTACCCACGCCGACCATTAA

Protein sequence

MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVEKFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYSTSASTSSTKRPPSPTHADH*

Homology

[Close]

BLAST of MELO3C005940 vs. Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-25
Identity = 53/87 (60.92%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 49  KFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPH 108
           +++GVRRRPWGK+AAEIRDPK+NGAR WLGT+ET ++AA+AYDRAAF++RG+KAKLNFPH
Sbjct: 91  QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPH 150

Query: 109 LIDSASTYSTSASTSSTKRPPSPTHAD 136
           LI S             +R P P+ +D
Sbjct: 151 LIGSCK--YEPVRIRPRRRSPEPSVSD 175

[Close]

BLAST of MELO3C005940 vs. Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-23
Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 1


Query: 48  EKFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFP 107
           +K++GVRRRPWGKYAAEIRD  R+GAR WLGTFETA+EAALAYDRAAF++RGAKA LNFP
Sbjct: 57  KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFP 116

Query: 108 HLIDSAS 115
             I +AS
Sbjct: 117 SEIVNAS 123

[Close]

BLAST of MELO3C005940 vs. Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.6e-22
Identity = 62/131 (47.33%), Postives = 76/131 (58.02%), Query Frame = 1


Query: 7   SDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVEKFKGVRRRPWGKYAAEIR 66
           S V+E+     +K+ L+KS     D      QD   +      ++GVR+RPWGK+AAEIR
Sbjct: 6   SRVIENPTDPPVKQELDKSDQHQPD------QDQPRR----RHYRGVRQRPWGKWAAEIR 65

Query: 67  DPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYST------SA 126
           DPK+  AR WLGTFETA+EAALAYDRAA K +G KAKLNFP  +   +T +T        
Sbjct: 66  DPKK-AARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTISHAPRGV 125

Query: 127 STSSTKRPPSP 132
           S S    PP P
Sbjct: 126 SESMNSPPPRP 125

[Close]

BLAST of MELO3C005940 vs. Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 4.6e-22
Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 1


Query: 44  AAAVEKFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAK 103
           AA  + ++GVR+RPWGK+AAEIRDP +NGAR WLGTFETA++AALAYDRAAF++RG++A 
Sbjct: 142 AAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRAL 201

Query: 104 LNFPHLIDS 113
           LNFP  ++S
Sbjct: 202 LNFPLRVNS 210

[Close]

BLAST of MELO3C005940 vs. Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.6e-22
Identity = 45/61 (73.77%), Postives = 55/61 (90.16%), Query Frame = 1


Query: 50  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHL 109
           ++GVR+RPWGK+AAEIRDP +NGAR WLGT+ETA+EAALAYD+AA+++RG+KA LNFPH 
Sbjct: 103 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHR 162

Query: 110 I 111
           I
Sbjct: 163 I 163

[Close]

BLAST of MELO3C005940 vs. TrEMBL
Match: A0A0A0L2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116720 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 9.6e-59
Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 1


Query: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVE---KFKGVRRRP 60
           MSSWRESDVL+SIRQHLL+ENLNKSGDG    I SIIQDHHYK AAVE   +FKGVRRRP
Sbjct: 1   MSSWRESDVLDSIRQHLLEENLNKSGDG----ICSIIQDHHYKGAAVENGVQFKGVRRRP 60

Query: 61  WGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYS 120
           WGKYAAEIRDPKRNGARTWLGTFETA EAALAYDRAAFKIRGAKAKLNFPHLIDS ST+S
Sbjct: 61  WGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHS 120

Query: 121 TSASTSSTKRPPSPTHADH 137
           TSASTSS   PPSPTHA H
Sbjct: 121 TSASTSSANPPPSPTHAHH 135

[Close]

BLAST of MELO3C005940 vs. TrEMBL
Match: A0A087HKC9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G014000 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.3e-27
Identity = 71/125 (56.80%), Postives = 88/125 (70.40%), Query Frame = 1


Query: 7   SDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVEKFKGVRRRPWGKYAAEIR 66
           S VL+SIR+HLL+++L+           ++ +    K  A   FKGVRRRPWGKYAAEIR
Sbjct: 11  SSVLDSIRRHLLEDDLD-----------TVPESPSRKKEA--NFKGVRRRPWGKYAAEIR 70

Query: 67  DPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYSTSASTSSTK 126
           DP ++GAR WLGT+ETA EAA+AYDRAAFK+RGAKAKLNFPHLI   S  S   +  + +
Sbjct: 71  DPNKHGARIWLGTYETAHEAAVAYDRAAFKMRGAKAKLNFPHLI---SIDSPEPARVTKR 119

Query: 127 RPPSP 132
           RP SP
Sbjct: 131 RPSSP 119

[Close]

BLAST of MELO3C005940 vs. TrEMBL
Match: B9MV98_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s04600g PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-26
Identity = 57/84 (67.86%), Postives = 70/84 (83.33%), Query Frame = 1


Query: 49  KFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPH 108
           ++KGVRRRPWGKYAAEIRDPK+NGAR WLGT+ET ++AALAYDRAAFK+RG+KAKLNFPH
Sbjct: 117 QYKGVRRRPWGKYAAEIRDPKKNGARMWLGTYETPEDAALAYDRAAFKMRGSKAKLNFPH 176

Query: 109 LIDSASTYSTSASTSSTKRPPSPT 133
           LI S + +  +  TS  +  P P+
Sbjct: 177 LIGSNNNWEPTRVTSKKRSSPEPS 200

[Close]

BLAST of MELO3C005940 vs. TrEMBL
Match: M4EV32_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.8e-26
Identity = 66/112 (58.93%), Postives = 82/112 (73.21%), Query Frame = 1


Query: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVE--KFKGVRRRPW 60
           ++S+  S VL+SIR+HLL++      D +    FS       ++ +     FKGVRRRPW
Sbjct: 5   LTSYDCSSVLDSIRRHLLED------DSESLSSFSSSSSPDLESTSRRGGNFKGVRRRPW 64

Query: 61  GKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLI 111
           GKYAAEIRDP ++GAR WLGT+ETA+EAA AYDRAAFK+RGAKAKLNFPHLI
Sbjct: 65  GKYAAEIRDPNKHGARIWLGTYETAEEAAAAYDRAAFKLRGAKAKLNFPHLI 110

[Close]

BLAST of MELO3C005940 vs. TrEMBL
Match: A0A140WWF3_LOTCO (AP2/ERF OS=Lotus corniculatus GN=ERF060 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.7e-26
Identity = 64/110 (58.18%), Postives = 76/110 (69.09%), Query Frame = 1


Query: 23  NKSGDGDGDGIFSIIQDHHYKAAAVEKFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFET 82
           N S  G   G  +  +  H   A  ++F+GVRRRPWGK+AAEIRDPK+NGAR WLGT+ET
Sbjct: 51  NSSPSGCKKGSSAEARSSHAPPAEWKRFRGVRRRPWGKFAAEIRDPKKNGARVWLGTYET 110

Query: 83  AQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYSTSASTSSTKR-PPSP 132
            +EA LAYDRAAFKIRG KAKLNFPHLI S +   T +   + KR  P P
Sbjct: 111 EEEAGLAYDRAAFKIRGRKAKLNFPHLIGSDTQPETPSVVEALKRNSPEP 160

[Close]

BLAST of MELO3C005940 vs. TAIR10
Match: AT2G44840.1 (AT2G44840.1 ethylene-responsive element binding factor 13)

HSP 1 Score: 115.2 bits (287), Expect = 3.3e-26
Identity = 53/87 (60.92%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 49  KFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPH 108
           +++GVRRRPWGK+AAEIRDPK+NGAR WLGT+ET ++AA+AYDRAAF++RG+KAKLNFPH
Sbjct: 91  QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPH 150

Query: 109 LIDSASTYSTSASTSSTKRPPSPTHAD 136
           LI S             +R P P+ +D
Sbjct: 151 LIGSCK--YEPVRIRPRRRSPEPSVSD 175

[Close]

BLAST of MELO3C005940 vs. TAIR10
Match: AT5G13330.1 (AT5G13330.1 related to AP2 6l)

HSP 1 Score: 105.5 bits (262), Expect = 2.6e-23
Identity = 62/131 (47.33%), Postives = 76/131 (58.02%), Query Frame = 1


Query: 7   SDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVEKFKGVRRRPWGKYAAEIR 66
           S V+E+     +K+ L+KS     D      QD   +      ++GVR+RPWGK+AAEIR
Sbjct: 6   SRVIENPTDPPVKQELDKSDQHQPD------QDQPRR----RHYRGVRQRPWGKWAAEIR 65

Query: 67  DPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYST------SA 126
           DPK+  AR WLGTFETA+EAALAYDRAA K +G KAKLNFP  +   +T +T        
Sbjct: 66  DPKK-AARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTISHAPRGV 125

Query: 127 STSSTKRPPSP 132
           S S    PP P
Sbjct: 126 SESMNSPPPRP 125

[Close]

BLAST of MELO3C005940 vs. TAIR10
Match: AT5G47220.1 (AT5G47220.1 ethylene responsive element binding factor 2)

HSP 1 Score: 105.5 bits (262), Expect = 2.6e-23
Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 1


Query: 44  AAAVEKFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAK 103
           A   + ++GVR+RPWGK+AAEIRDP +NGAR WLGTFETA++AALAYD AAF++RG++A 
Sbjct: 111 AVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRAL 170

Query: 104 LNFPHLIDSA-----------STYSTSASTSST 126
           LNFP  ++S            S+ S+S+S+SST
Sbjct: 171 LNFPLRVNSGEPDPVRITSKRSSSSSSSSSSST 203

[Close]

BLAST of MELO3C005940 vs. TAIR10
Match: AT4G17500.1 (AT4G17500.1 ethylene responsive element binding factor 1)

HSP 1 Score: 105.5 bits (262), Expect = 2.6e-23
Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 1


Query: 44  AAAVEKFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAK 103
           AA  + ++GVR+RPWGK+AAEIRDP +NGAR WLGTFETA++AALAYDRAAF++RG++A 
Sbjct: 142 AAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRAL 201

Query: 104 LNFPHLIDS 113
           LNFP  ++S
Sbjct: 202 LNFPLRVNS 210

[Close]

BLAST of MELO3C005940 vs. TAIR10
Match: AT3G23230.1 (AT3G23230.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 3.4e-23
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 49  KFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPH 108
           +F+GVRRRPWGK+AAEIRDP RNGAR WLGTFETA+EAA AYDRAAF +RG  A LNFP+
Sbjct: 19  RFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPN 78

Query: 109 ----LIDSAS---TYSTSASTSST 126
                +D  S    Y++S+S+SS+
Sbjct: 79  EYYPRMDDYSLRPPYASSSSSSSS 102

[Close]

BLAST of MELO3C005940 vs. NCBI nr
Match: gi|659077723|ref|XP_008439349.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 2.8e-72
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVEKFKGVRRRPWGK 60
           MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVEKFKGVRRRPWGK
Sbjct: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVEKFKGVRRRPWGK 60

Query: 61  YAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYSTSA 120
           YAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYSTSA
Sbjct: 61  YAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYSTSA 120

Query: 121 STSSTKRPPSPTHADH 137
           STSSTKRPPSPTHADH
Sbjct: 121 STSSTKRPPSPTHADH 136

[Close]

BLAST of MELO3C005940 vs. NCBI nr
Match: gi|449432980|ref|XP_004134276.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-58
Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 1


Query: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVE---KFKGVRRRP 60
           MSSWRESDVL+SIRQHLL+ENLNKSGDG    I SIIQDHHYK AAVE   +FKGVRRRP
Sbjct: 1   MSSWRESDVLDSIRQHLLEENLNKSGDG----ICSIIQDHHYKGAAVENGVQFKGVRRRP 60

Query: 61  WGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYS 120
           WGKYAAEIRDPKRNGARTWLGTFETA EAALAYDRAAFKIRGAKAKLNFPHLIDS ST+S
Sbjct: 61  WGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHS 120

Query: 121 TSASTSSTKRPPSPTHADH 137
           TSASTSS   PPSPTHA H
Sbjct: 121 TSASTSSANPPPSPTHAHH 135

[Close]

BLAST of MELO3C005940 vs. NCBI nr
Match: gi|674249816|gb|KFK42581.1| (hypothetical protein AALP_AA1G014000 [Arabis alpina])

HSP 1 Score: 129.4 bits (324), Expect = 4.8e-27
Identity = 71/125 (56.80%), Postives = 88/125 (70.40%), Query Frame = 1


Query: 7   SDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVEKFKGVRRRPWGKYAAEIR 66
           S VL+SIR+HLL+++L+           ++ +    K  A   FKGVRRRPWGKYAAEIR
Sbjct: 11  SSVLDSIRRHLLEDDLD-----------TVPESPSRKKEA--NFKGVRRRPWGKYAAEIR 70

Query: 67  DPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYSTSASTSSTK 126
           DP ++GAR WLGT+ETA EAA+AYDRAAFK+RGAKAKLNFPHLI   S  S   +  + +
Sbjct: 71  DPNKHGARIWLGTYETAHEAAVAYDRAAFKMRGAKAKLNFPHLI---SIDSPEPARVTKR 119

Query: 127 RPPSP 132
           RP SP
Sbjct: 131 RPSSP 119

[Close]

BLAST of MELO3C005940 vs. NCBI nr
Match: gi|1021565712|ref|XP_016174193.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Arachis ipaensis])

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-26
Identity = 62/105 (59.05%), Postives = 76/105 (72.38%), Query Frame = 1


Query: 27  DGDGDGIFSIIQDHHYKAAAVEKFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEA 86
           +G G+GI    ++ H  A     ++GVRRRPWGKYAAEIRDPKRNG R WLGT+ETA++A
Sbjct: 101 EGKGNGIVEA-REVHALAKGGRGYRGVRRRPWGKYAAEIRDPKRNGVRVWLGTYETAEDA 160

Query: 87  ALAYDRAAFKIRGAKAKLNFPHLIDSASTYSTSASTSSTKRPPSP 132
           ALAYDRAAFK+RG+KAKLNFPHLI S      +  T   + P +P
Sbjct: 161 ALAYDRAAFKMRGSKAKLNFPHLIGSDEVGEPARVTLKRRSPETP 204

[Close]

BLAST of MELO3C005940 vs. NCBI nr
Match: gi|566202511|ref|XP_006375126.1| (hypothetical protein POPTR_0014s04600g [Populus trichocarpa])

HSP 1 Score: 126.7 bits (317), Expect = 3.1e-26
Identity = 57/84 (67.86%), Postives = 70/84 (83.33%), Query Frame = 1


Query: 49  KFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPH 108
           ++KGVRRRPWGKYAAEIRDPK+NGAR WLGT+ET ++AALAYDRAAFK+RG+KAKLNFPH
Sbjct: 117 QYKGVRRRPWGKYAAEIRDPKKNGARMWLGTYETPEDAALAYDRAAFKMRGSKAKLNFPH 176

Query: 109 LIDSASTYSTSASTSSTKRPPSPT 133
           LI S + +  +  TS  +  P P+
Sbjct: 177 LIGSNNNWEPTRVTSKKRSSPEPS 200

The following BLAST results are available for this feature:

BLAST of MELO3C005940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF99_ARATH	5.8e-25	60.92	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=...	[more]
PTI5_SOLLC	1.9e-23	77.61	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]
EF113_ARATH	4.6e-22	47.33	Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF11...	[more]
EF100_ARATH	4.6e-22	68.12	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=...	[more]
ERF2_NICSY	4.6e-22	73.77	Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 ...	[more]

BLAST of MELO3C005940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2V9_CUCSA	9.6e-59	86.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116720 PE=4 SV=1	[more]
A0A087HKC9_ARAAL	3.3e-27	56.80	Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G014000 PE=4 SV=1	[more]
B9MV98_POPTR	2.2e-26	67.86	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s04600g PE=4 SV=1	[more]
M4EV32_BRARP	2.8e-26	58.93	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A140WWF3_LOTCO	3.7e-26	58.18	AP2/ERF OS=Lotus corniculatus GN=ERF060 PE=2 SV=1	[more]

BLAST of MELO3C005940 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44840.1	3.3e-26	60.92	ethylene-responsive element binding factor 13	[more]
AT5G13330.1	2.6e-23	47.33	related to AP2 6l	[more]
AT5G47220.1	2.6e-23	55.91	ethylene responsive element binding factor 2	[more]
AT4G17500.1	2.6e-23	68.12	ethylene responsive element binding factor 1	[more]
AT3G23230.1	3.4e-23	64.29	Integrase-type DNA-binding superfamily protein	[more]

BLAST of MELO3C005940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077723\|ref\|XP_008439349.1\|	2.8e-72	100.00	PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo]	[more]
gi\|449432980\|ref\|XP_004134276.1\|	1.4e-58	86.33	PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis sativus]	[more]
gi\|674249816\|gb\|KFK42581.1\|	4.8e-27	56.80	hypothetical protein AALP_AA1G014000 [Arabis alpina]	[more]
gi\|1021565712\|ref\|XP_016174193.1\|	2.4e-26	59.05	PREDICTED: ethylene-responsive transcription factor 13-like [Arachis ipaensis]	[more]
gi\|566202511\|ref\|XP_006375126.1\|	3.1e-26	67.86	hypothetical protein POPTR_0014s04600g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0009863	salicylic acid mediated signaling pathway
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0043067	regulation of programmed cell death
biological_process	GO:0002376	immune system process
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0006952	defense response
biological_process	GO:1901701	cellular response to oxygen-containing compound
biological_process	GO:0071229	cellular response to acid chemical
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009733	response to auxin
biological_process	GO:0002679	respiratory burst involved in defense response
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0035556	intracellular signal transduction
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005940T1	MELO3C005940T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 50..61 score: 9.5E-13coord: 89..109 score: 9.5
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 49..108 score: 2.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 49..99 score: 4.2
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 49..113 score: 9.9
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 49..107 score: 23
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 49..108 score: 3.4
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 48..114 score: 7.7
None	No IPR available	PANTHER	PTHR31190:SF21	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13	coord: 48..114 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005940	Csa3G116720	Cucumber (Chinese Long) v2	cumeB236
MELO3C005940	Cla021069	Watermelon (97103) v1	mewmB461
MELO3C005940	ClCG05G000100	Watermelon (Charleston Gray)	mewcgB427
MELO3C005940	Cla97C05G080020	Watermelon (97103) v2	mewmbB434
MELO3C005940	Bhi01G000455	Wax gourd	mewgoB540
MELO3C005940	CSPI03G07060	Wild cucumber (PI 183967)	cpimeB230
MELO3C005940	Cucsa.260030	Cucumber (Gy14) v1	cgymeB439
MELO3C005940	CmaCh06G009360	Cucurbita maxima (Rimu)	cmameB766
MELO3C005940	CmoCh06G009640	Cucurbita moschata (Rifu)	cmomeB755
MELO3C005940	Lsi05G022300	Bottle gourd (USVL1VR-Ls)	lsimeB378
MELO3C005940	CsGy3G007210	Cucumber (Gy14) v2	cgybmeB200
MELO3C005940	Carg25064	Silver-seed gourd	carmeB0985
MELO3C005940	CsaV3_3G007180	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005940	Cucurbita pepo (Zucchini)	cpemeB815