Carg25064 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25064
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ethylene-responsive transcription factor, putative
Location	Cucurbita_argyrosperma_scaffold_201 : 362540 .. 365660 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTATGGTATTCCTATGCGCTTCGAGGCGACCGAAAGAGACCTTAATTTCCAAGGAAATTGTTACTCCGCTACATGTCGCACATCCGACCTCGACCGTATTATCTCCCATGTCTAGTTTTGTGTCACCGATCTCCACGTGATGTACCTAGGTCGCCCTAGCATATCAATTGTTATTATGTCGAACTCTCCGATGTTCATGCCGATAGTAATCGACAGTCTTGAGCGTCAGAAGTTATGCTAGCCGAGATCTTATTAGAGGTTTACTCGTGAAGGAGCCACAGCATCGACTTGGGGTCAAGAGGGGTGCAACTGAGATCAAGCAACATCCTTTCTTTGAAGGTGTGAATTGGGCTTTGATTCGATGCAGCACGCCCCCAGAAGTGCCTAGACCAATGGAGGCCGAACTGCCTAAGTTTGGGGTAGCTGACACAACAGGGGTTGGCGGCGGCGGCGGCGGCATCGGCGTCGGCGTCGGCAGCGGCAGTAAGAGGAGGGTAGGTACAGATGTTGTGAAGTCCGGTGGTCAATATCTTGACTTCGAGTTCTTTTAAATCTCGGATAAGCAGGATGGTTTGGTGGGGTCTAAAAGTAATTGGCCACAGGATGGTCTGTGTTGTTCGTTCTTCCAATATTGAATCCGCCTCATAGTTAGATAGATATTCCACTCCTAGAATTGGTACGTTTGATAAATTGAGTTTCTGAAAGAATCCACGTATTGCACGCTGTCTGATATGAACAAGTCTGAACCATGATGCTATTCTCATCAGATCTTCCCTTTGGTACACTGCAGTAAATTGCAATTCATGACCCATGTCTGCCTCTTTTTCATCAACAATCATCACTCACCACTGCTAATTACTGTCGTCTGTGCAAGGTAATCCCTTATAGATTGAGAATATGGTACCCGACCATAAATTGGCTCGACTTGATTCATTTGGTATTGAGAGTGAGTACCACACAATCGCAAAGTTCCTTAATTGTGAGCAAGACAGCTATACCTTTGCATAACAAAAACTAATTGCATTTGTTATAGTTCTAATGTTTATTATCAAGCCTCTGAACTGCTGTTGTTAGTCGCACACACCTATTCACTCGTCTAGAAGAATCGTGTTGTAAAAAAACCAACGCTTGTGCTCCGTAACCGATCAAAGATTCTGGACGATACACAACAATCAAATTCAGTCGTATCGATATCATAATTGGGCAAAACCATGGTCAGGTCGTCTCCTCTTACTCAATCAAGTTCAGTTCCACTAGCAACTCCAATTGATCAGAAAGAGAGGAAGAGGGTCGAGACAAGGATACAGAAAACAAGCCCTTTAGGCGATGCCCAATTCCTACAACTCTAGAGACAAAAGGGAGAGGACTCCGTTAAATAAACAATCAAATCATAATTCATTCAACTCAATACAATCCATAGCGAGAGATGCTATTGGGAGATACATAACCATTTTTCATCTCGATTCTCGCCCTCTTATTTTAATTTCATATTTATTTTCTTTTTTATTTTCATAAAGAGTGGAGTGGAGATTACTAATTAAGAAAAAAAAAATCAATTATATATATATATATATCTAATAATTTTTTAATGTCCATCTTTTACTACCATTTTTATTAGAAAAAAGTAAAATATTTTAATAAATTTAATAATATTTTATAAATATAAACTTATTTATTTTTTACTAAATTTAGACACGATTAACGACGGTAGTCCAGTTTAGCTAATGAATTTTCACTGTTCTTATAGTCAGTAATAACATCACTCTTCTCATCACTATTACAGATCTGTACATGAGATTTTCACCTCATACAGCTCCTTAAGGGCCATAAATAAATTTAAGGAGTGTGTCAGAATTATTTATCTTAATATGTATTCTTTAGAGAAGAGTACAGAATAAAAATCTATCGTGTGGCCCCCAATTAACCCAATAGAATTCTGTATATTCTAATAATAAAGAAAAAAAAGGTACTCTAAATTGATCTCATCCTTTAATAAAGGTATCTCTTCACTTGGTATATATTTTCTATATAAGCTGTAAATTTTTTATTATTCTGTATAGGTCAATTCAAAATCTATGTAAAAATTATTTTTATACCGACAAAATACTTTTTTGAAGACTTTTATGTTAGAAACAGATACGATATGGTGGTAGATATATGTGTGTGTATATATATATAAAAAGAAGAAATGAGAAATAGAAGTAACCATGAACGTTCAAGTGAGAACTGTCCCCATTACATATAAAATATTTGAAACACACGTTTTCAATGTTGTGGCCATGGTTTTGTGCACCTTTTTCATAGTGCTACCATTTTTTTAAAACCTTTTCTTATAGAATCTGACATAACCATAAATATTATATTAAAATTTTCAAATTAAAAAATACATTCAAACTTTCCCCAGTATTTAAGAATACCAATTTTGTTGGCATTTAAATTATACAAATTCTCACCGAATAATATAATAGAATATGAATTAGGAACACGGGGTAATTTGGAAGTTTCAAAGAAATAGACGTTGCGTTGAGCTGAATGATATATAAAGACATAGATATGAATAGTGAGTGTGGTTGAAATTAGTAGACTGAGAGAATCAAGGATGTCGAGTAACAGCAATTGCTCACAAGGGTCGTCGTCGTCATCGTCGTCAGAGGTGTTTCTGTTGGAGTGGATTCGGCGACATCTTTTGGAGGACGAGTTGGAATTCGGTTGGGGGATTAGGGAAAAATACTCCGAGTTTGACGAGTAGTGATGGGGTTACGGATATCGAGGCCCCCGGGAAGGGGAGTTCGATTAGAGGGCTGCAGTTCAGAGGAGTGAGGAGGAGGCCATGGGGGAAGTACGCAGCAGAGATCAGAGACCCCAATAGAAAAGGGGCTCGCATATGGCTGGGGACATACCAGACCGCTGAAGAGGCTGCTTTGGCTTACGATCGAGCTGCTTTTCAGATGCGGGGAGCCAAGGCCAAGCTCAACTTTCCTCACATGATTGGTTCCGCGGAGGCGCTGATTGGCATAGGCTGCTGTTACCCTAAGCGCGCTTCCCCTGATTCCCCTCCGCCTCTGTTCAGCGTCAAGCGCCCTAGAACCGACTCGCCCTCAATGCCACGATGTTAA

mRNA sequence

ATGTCCTATGTCTTGAGCGTCAGAAGTTATGCTAGCCGAGATCTTATTAGAGGTTTACTCGTGAAGGAGCCACAGCATCGACTTGGGGTCAAGAGGGGTGCAACTGAGATCAAGCAACATCCTTTCTTTGAAGGTGTGAATTGGGCTTTGATTCGATGCAGCACGCCCCCAGAAGTGCCTAGACCAATGGAGGCCGAACTGCCTAAGTTTGGGGTAGCTGACACAACAGGGGTTGGCGGCGGCGGCGGCGGCATCGGCGTCGGCGTCGGCAGCGGCACAATTGCTCACAAGGGTCGTCGTCGTCATCGTCGTCAGAGGTGTTTCTGTTGGAGTGGATTCGGCGACATCTTTTGGAGGACGAGTTGGAATTCGGTTGGGGGATTAGGGAAAAATACTCCGAGTTTGACGAGTAGTGATGGGGTTACGGATATCGAGGCCCCCGGGAAGGGGAGTTCGATTAGAGGGCTGCAGTTCAGAGGAGTGAGGAGGAGGCCATGGGGGAAGTACGCAGCAGAGATCAGAGACCCCAATAGAAAAGGGGCTCGCATATGGCTGGGGACATACCAGACCGCTGAAGAGGCTGCTTTGGCTTACGATCGAGCTGCTTTTCAGATGCGGGGAGCCAAGGCCAAGCTCAACTTTCCTCACATGATTGGTTCCGCGGAGGCGCTGATTGGCATAGGCTGCTGTTACCCTAAGCGCGCTTCCCCTGATTCCCCTCCGCCTCTGTTCAGCGTCAAGCGCCCTAGAACCGACTCGCCCTCAATGCCACGATGTTAA

Coding sequence (CDS)

ATGTCCTATGTCTTGAGCGTCAGAAGTTATGCTAGCCGAGATCTTATTAGAGGTTTACTCGTGAAGGAGCCACAGCATCGACTTGGGGTCAAGAGGGGTGCAACTGAGATCAAGCAACATCCTTTCTTTGAAGGTGTGAATTGGGCTTTGATTCGATGCAGCACGCCCCCAGAAGTGCCTAGACCAATGGAGGCCGAACTGCCTAAGTTTGGGGTAGCTGACACAACAGGGGTTGGCGGCGGCGGCGGCGGCATCGGCGTCGGCGTCGGCAGCGGCACAATTGCTCACAAGGGTCGTCGTCGTCATCGTCGTCAGAGGTGTTTCTGTTGGAGTGGATTCGGCGACATCTTTTGGAGGACGAGTTGGAATTCGGTTGGGGGATTAGGGAAAAATACTCCGAGTTTGACGAGTAGTGATGGGGTTACGGATATCGAGGCCCCCGGGAAGGGGAGTTCGATTAGAGGGCTGCAGTTCAGAGGAGTGAGGAGGAGGCCATGGGGGAAGTACGCAGCAGAGATCAGAGACCCCAATAGAAAAGGGGCTCGCATATGGCTGGGGACATACCAGACCGCTGAAGAGGCTGCTTTGGCTTACGATCGAGCTGCTTTTCAGATGCGGGGAGCCAAGGCCAAGCTCAACTTTCCTCACATGATTGGTTCCGCGGAGGCGCTGATTGGCATAGGCTGCTGTTACCCTAAGCGCGCTTCCCCTGATTCCCCTCCGCCTCTGTTCAGCGTCAAGCGCCCTAGAACCGACTCGCCCTCAATGCCACGATGTTAA

Protein sequence

MSYVLSVRSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELPKFGVADTTGVGGGGGGIGVGVGSGTIAHKGRRRHRRQRCFCWSGFGDIFWRTSWNSVGGLGKNTPSLTSSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC

Homology

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BLAST of Carg25064 vs. NCBI nr
Match: XP_022950239.1 (ethylene-responsive transcription factor 1-like [Cucurbita moschata])

HSP 1 Score: 275.8 bits (704), Expect = 1.5e-70
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 125 VGGLGKNTPSLTSSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIW 184
           VGGLGKNTPSL SSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIW
Sbjct: 34  VGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIW 93

Query: 185 LGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLF 244
           LGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLF
Sbjct: 94  LGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLF 153

Query: 245 SVKRPRTDSPSMPRC 260
           SVKRPRTDSPSMPRC
Sbjct: 154 SVKRPRTDSPSMPRC 168

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BLAST of Carg25064 vs. NCBI nr
Match: XP_022974259.1 (ethylene-responsive transcription factor 13-like [Cucurbita maxima])

HSP 1 Score: 273.5 bits (698), Expect = 7.5e-70
Identity = 133/137 (97.08%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 123 NSVGGLGKNTPSLTSSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGAR 182
           +SVGGLGKNTPSL S DGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGAR
Sbjct: 32  DSVGGLGKNTPSLKSGDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGAR 91

Query: 183 IWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPP 242
           IWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASP+SPPP
Sbjct: 92  IWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPNSPPP 151

Query: 243 LFSVKRPRTDSPSMPRC 260
           LFSVKRPRTDSPSMPRC
Sbjct: 152 LFSVKRPRTDSPSMPRC 168

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BLAST of Carg25064 vs. NCBI nr
Match: XP_023539438.1 (ethylene-responsive transcription factor 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.4 bits (690), Expect = 6.4e-69
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 123 NSVGGLGKNTPSLTSSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGAR 182
           +SVGGLGKNTPSLTS DGVTD E PGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGAR
Sbjct: 31  DSVGGLGKNTPSLTSIDGVTDTETPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGAR 90

Query: 183 IWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPP 242
           IWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCC+PKRASPDSPPP
Sbjct: 91  IWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCHPKRASPDSPPP 150

Query: 243 LFSVKRPRTDSPSMPRC 260
           LFSVKRPRTDSP+MPRC
Sbjct: 151 LFSVKRPRTDSPAMPRC 167

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BLAST of Carg25064 vs. NCBI nr
Match: XP_022935656.1 (serine/threonine-protein kinase D6PKL1-like [Cucurbita moschata])

HSP 1 Score: 148.7 bits (374), Expect = 2.8e-32
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 9   SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 68
           SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP
Sbjct: 632 SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 691

Query: 69  KFGVADTTG 78
           KFGVADTTG
Sbjct: 692 KFGVADTTG 700

[Close]

BLAST of Carg25064 vs. NCBI nr
Match: XP_022974269.1 (serine/threonine-protein kinase D6PKL1-like [Cucurbita maxima])

HSP 1 Score: 148.7 bits (374), Expect = 2.8e-32
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 9   SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 68
           SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP
Sbjct: 632 SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 691

Query: 69  KFGVADTTG 78
           KFGVADTTG
Sbjct: 692 KFGVADTTG 700

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BLAST of Carg25064 vs. TAIR10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13)

HSP 1 Score: 122.9 bits (307), Expect = 3.0e-28
Identity = 64/115 (55.65%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 130 KNTPSLTSSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQ 189
           +N P  T + G     AP +    +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY+
Sbjct: 71  ENKPPATKASG---SHAPRQ----KGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYE 130

Query: 190 TAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCY------PKRASPD 239
           T E+AA+AYDRAAFQ+RG+KAKLNFPH+IGS        C Y      P+R SP+
Sbjct: 131 TPEDAAVAYDRAAFQLRGSKAKLNFPHLIGS--------CKYEPVRIRPRRRSPE 170

[Close]

BLAST of Carg25064 vs. TAIR10
Match: AT2G44830.1 (Protein kinase superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 8.1e-26
Identity = 54/70 (77.14%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 9   SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAE-L 68
           SYA RDLI+ LLVK+P++RLG KRGATEIKQHPFFEGVNWALIRCSTPPEVPR ME E  
Sbjct: 663 SYAGRDLIQALLVKDPKNRLGTKRGATEIKQHPFFEGVNWALIRCSTPPEVPRQMETEPP 722

Query: 69  PKFGVADTTG 78
           PK+G  D  G
Sbjct: 723 PKYGPIDPVG 732

[Close]

BLAST of Carg25064 vs. TAIR10
Match: AT5G47750.1 (D6 protein kinase like 2)

HSP 1 Score: 112.8 bits (281), Expect = 3.1e-25
Identity = 50/68 (73.53%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 7   VRSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAE 66
           V S+A+RDLIRGLL+KEPQ RLG KRGATE+KQHPFFEGVNWALIRC+TPPE+P+P+E E
Sbjct: 491 VVSFAARDLIRGLLMKEPQQRLGFKRGATEVKQHPFFEGVNWALIRCATPPEIPKPVELE 550

Query: 67  LPKFGVAD 75
                VA+
Sbjct: 551 KGAVSVAE 558

[Close]

BLAST of Carg25064 vs. TAIR10
Match: AT4G17500.1 (ethylene responsive element binding factor 1)

HSP 1 Score: 107.8 bits (268), Expect = 9.9e-24
Identity = 47/72 (65.28%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 151 SSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKA 210
           ++ +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGT++TAE+AALAYDRAAF+MRG++A
Sbjct: 141 TAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRA 200

Query: 211 KLNFPHMIGSAE 223
            LNFP  + S E
Sbjct: 201 LLNFPLRVNSGE 212

[Close]

BLAST of Carg25064 vs. TAIR10
Match: AT5G55910.1 (D6 protein kinase)

HSP 1 Score: 107.8 bits (268), Expect = 9.9e-24
Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 7   VRSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAE 66
           V S+A+RDLIR LLVKEPQHRL  KRGATEIKQHPFFEGVNWAL+RC++PPE+P+P++ E
Sbjct: 410 VVSFAARDLIRSLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALVRCASPPEIPKPVDLE 469

[Close]

BLAST of Carg25064 vs. Swiss-Prot
Match: sp|Q8L9K1|ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=2 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 5.4e-27
Identity = 64/115 (55.65%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 130 KNTPSLTSSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQ 189
           +N P  T + G     AP +    +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY+
Sbjct: 71  ENKPPATKASG---SHAPRQ----KGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYE 130

Query: 190 TAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCY------PKRASPD 239
           T E+AA+AYDRAAFQ+RG+KAKLNFPH+IGS        C Y      P+R SP+
Sbjct: 131 TPEDAAVAYDRAAFQLRGSKAKLNFPHLIGS--------CKYEPVRIRPRRRSPE 170

[Close]

BLAST of Carg25064 vs. Swiss-Prot
Match: sp|A2YBX5|G11A_ORYSI (Protein kinase G11A OS=Oryza sativa subsp. indica OX=39946 GN=OsI_021818 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.2e-24
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 7   VRSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAE 66
           V S+++RDLIRGLLVKEPQ RLG KRGATEIKQHPFFEGVNWALIRC++PPEVPRP+E E
Sbjct: 497 VVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWALIRCASPPEVPRPVEIE 556

Query: 67  LP 69
            P
Sbjct: 557 RP 558

[Close]

BLAST of Carg25064 vs. Swiss-Prot
Match: sp|Q0DCT8|G11A_ORYSJ (Protein kinase G11A OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0291600 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.2e-24
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 7   VRSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAE 66
           V S+++RDLIRGLLVKEPQ RLG KRGATEIKQHPFFEGVNWALIRC++PPEVPRP+E E
Sbjct: 497 VVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWALIRCASPPEVPRPVEIE 556

Query: 67  LP 69
            P
Sbjct: 557 RP 558

[Close]

BLAST of Carg25064 vs. Swiss-Prot
Match: sp|Q39183|D6KL2_ARATH (Serine/threonine-protein kinase D6PKL2 OS=Arabidopsis thaliana OX=3702 GN=D6PKL2 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.5e-24
Identity = 50/68 (73.53%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 7   VRSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAE 66
           V S+A+RDLIRGLL+KEPQ RLG KRGATE+KQHPFFEGVNWALIRC+TPPE+P+P+E E
Sbjct: 491 VVSFAARDLIRGLLMKEPQQRLGFKRGATEVKQHPFFEGVNWALIRCATPPEIPKPVELE 550

Query: 67  LPKFGVAD 75
                VA+
Sbjct: 551 KGAVSVAE 558

[Close]

BLAST of Carg25064 vs. Swiss-Prot
Match: sp|Q40476|ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.5e-24
Identity = 50/69 (72.46%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 154 RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLN 213
           RG  +RGVRRRPWGK+AAEIRDP + GAR+WLGTY+T EEAA+AYD+AA++MRG+KA LN
Sbjct: 101 RGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLN 160

Query: 214 FPHMIGSAE 223
           FPH IG  E
Sbjct: 161 FPHRIGLNE 169

[Close]

BLAST of Carg25064 vs. TrEMBL
Match: tr|A0A0A0L6X0|A0A0A0L6X0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116740 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 5.4e-32
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 9   SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 68
           SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP
Sbjct: 633 SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 692

Query: 69  KFGVADTTG 78
           KFGV DTTG
Sbjct: 693 KFGVVDTTG 701

[Close]

BLAST of Carg25064 vs. TrEMBL
Match: tr|A0A1S3AUF3|A0A1S3AUF3_CUCME (serine/threonine-protein kinase D6PKL2 OS=Cucumis melo OX=3656 GN=LOC103483101 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.7e-31
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 9   SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 68
           SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP
Sbjct: 633 SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 692

Query: 69  KFGVADTTG 78
           KFGV D TG
Sbjct: 693 KFGVVDPTG 701

[Close]

BLAST of Carg25064 vs. TrEMBL
Match: tr|A0A2I4HEM3|A0A2I4HEM3_9ROSI (serine/threonine-protein kinase D6PK-like OS=Juglans regia OX=51240 GN=LOC109016666 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.3e-29
Identity = 65/70 (92.86%), Postives = 65/70 (92.86%), Query Frame = 0


Query: 9   SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 68
           SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPME ELP
Sbjct: 680 SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMETELP 739

Query: 69  -KFGVADTTG 78
            KFG  DT G
Sbjct: 740 GKFGAVDTVG 749

[Close]

BLAST of Carg25064 vs. TrEMBL
Match: tr|M5XIU1|M5XIU1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G131700 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.3e-29
Identity = 65/70 (92.86%), Postives = 65/70 (92.86%), Query Frame = 0


Query: 9   SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 68
           SYA RDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP
Sbjct: 666 SYAGRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 725

Query: 69  -KFGVADTTG 78
            KFG  DT G
Sbjct: 726 GKFGAVDTVG 735

[Close]

BLAST of Carg25064 vs. TrEMBL
Match: tr|A0A067H3L0|A0A067H3L0_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0047901mg PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 7.3e-29
Identity = 65/70 (92.86%), Postives = 65/70 (92.86%), Query Frame = 0


Query: 9   SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 68
           SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP
Sbjct: 199 SYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELP 258

Query: 69  -KFGVADTTG 78
            KFG  D  G
Sbjct: 259 GKFGAVDPVG 268

The following BLAST results are available for this feature:

BLAST of Carg25064 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950239.1	1.5e-70	99.26	ethylene-responsive transcription factor 1-like [Cucurbita moschata]	[more]
XP_022974259.1	7.5e-70	97.08	ethylene-responsive transcription factor 13-like [Cucurbita maxima]	[more]
XP_023539438.1	6.4e-69	95.62	ethylene-responsive transcription factor 13-like [Cucurbita pepo subsp. pepo]	[more]
XP_022935656.1	2.8e-32	100.00	serine/threonine-protein kinase D6PKL1-like [Cucurbita moschata]	[more]
XP_022974269.1	2.8e-32	100.00	serine/threonine-protein kinase D6PKL1-like [Cucurbita maxima]	[more]

BLAST of Carg25064 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44840.1	3.0e-28	55.65	ethylene-responsive element binding factor 13	[more]
AT2G44830.1	8.1e-26	77.14	Protein kinase superfamily protein	[more]
AT5G47750.1	3.1e-25	73.53	D6 protein kinase like 2	[more]
AT4G17500.1	9.9e-24	65.28	ethylene responsive element binding factor 1	[more]
AT5G55910.1	9.9e-24	76.67	D6 protein kinase	[more]

BLAST of Carg25064 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L9K1\|ERF99_ARATH	5.4e-27	55.65	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
sp\|A2YBX5\|G11A_ORYSI	4.2e-24	82.26	Protein kinase G11A OS=Oryza sativa subsp. indica OX=39946 GN=OsI_021818 PE=2 SV...	[more]
sp\|Q0DCT8\|G11A_ORYSJ	4.2e-24	82.26	Protein kinase G11A OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0291600 PE=...	[more]
sp\|Q39183\|D6KL2_ARATH	5.5e-24	73.53	Serine/threonine-protein kinase D6PKL2 OS=Arabidopsis thaliana OX=3702 GN=D6PKL2...	[more]
sp\|Q40476\|ERF1_TOBAC	5.5e-24	72.46	Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 ...	[more]

BLAST of Carg25064 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6X0\|A0A0A0L6X0_CUCSA	5.4e-32	98.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116740 PE=4 SV=1	[more]
tr\|A0A1S3AUF3\|A0A1S3AUF3_CUCME	2.7e-31	97.10	serine/threonine-protein kinase D6PKL2 OS=Cucumis melo OX=3656 GN=LOC103483101 P...	[more]
tr\|A0A2I4HEM3\|A0A2I4HEM3_9ROSI	4.3e-29	92.86	serine/threonine-protein kinase D6PK-like OS=Juglans regia OX=51240 GN=LOC109016...	[more]
tr\|M5XIU1\|M5XIU1_PRUPE	4.3e-29	92.86	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G131700 PE=4 SV=1	[more]
tr\|A0A067H3L0\|A0A067H3L0_CITSI	7.3e-29	92.86	Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0047901...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25064-RA	Carg25064-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 158..169 score: 65.91 coord: 181..197 score: 65.99
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 157..221 e-value: 5.7E-35 score: 132.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 158..207 e-value: 7.2E-14 score: 51.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 157..215 score: 23.828
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 157..216 e-value: 6.04222E-29 score: 104.661
None	No IPR available	GENE3D	G3DSA:1.10.510.10		coord: 8..60 e-value: 5.6E-11 score: 44.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..259
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 143..243
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 157..218 e-value: 2.5E-32 score: 112.5
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 158..216
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	coord: 9..66

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25064	Cla021069	Watermelon (97103) v1	carwmB1013
Carg25064	Csa3G116720	Cucumber (Chinese Long) v2	carcuB1025
Carg25064	MELO3C005940	Melon (DHL92) v3.5.1	carmeB0985
Carg25064	ClCG05G000100	Watermelon (Charleston Gray)	carwcgB0988
Carg25064	CSPI03G07060	Wild cucumber (PI 183967)	carcpiB1049
Carg25064	Cucsa.260030	Cucumber (Gy14) v1	carcgyB1129
Carg25064	CmaCh06G009360	Cucurbita maxima (Rimu)	carcmaB1405
Carg25064	CmoCh06G009640	Cucurbita moschata (Rifu)	carcmoB1362
Carg25064	Lsi05G022300	Bottle gourd (USVL1VR-Ls)	carlsiB926
Carg25064	CsGy3G007210	Cucumber (Gy14) v2	carcgybB0997
Carg25064	MELO3C005940.2	Melon (DHL92) v3.6.1	carmedB0995
Carg25064	CsaV3_3G007180	Cucumber (Chinese Long) v3	carcucB1055
Carg25064	Cla97C05G080020	Watermelon (97103) v2	carwmbB1070
Carg25064	Bhi01G000453	Wax gourd	carwgoB1188

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25064	Cucurbita pepo (Zucchini)	carcpeB1410