CSPI03G07060 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGACTCGATCCGTCAGCATCTTCTGGAAGAGAACTTAAACAAGAGTGGGGATGGGATTTGTAGTATTATTCAGGATCATCATTATAAAGGGGCGGCGGTGGAGAATGGAGTGCAGTTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAATGGAGCCAGAACGTGGCTGGGGACCTTTGAAACGGCCCAAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCGAAACTCAACTTTCCACATCTCATTGATTCTGATTCTACACATTCTACTTCTGCTTCTACTTCGTCTGCTAACCCTCCTCCAAGTCCTACCCACGCCCACCATCAAACTTCTGCTGACAACTACGCCTGTTAGCCTGTTACTTCACTTTTTCCCAAGCCTCTCACCCCCATTTCATTTCCCACGTACTTTGCCTGCTTCCCCATCCATTCCAATTATCTACAAACCGACTATTACACACTAATAATATTATATATCAGTTATATAATTTATTTCCGATTTGCATCAGGGTGAGG ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGACTCGATCCGTCAGCATCTTCTGGAAGAGAACTTAAACAAGAGTGGGGATGGGATTTGTAGTATTATTCAGGATCATCATTATAAAGGGGCGGCGGTGGAGAATGGAGTGCAGTTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAATGGAGCCAGAACGTGGCTGGGGACCTTTGAAACGGCCCAAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCGAAACTCAACTTTCCACATCTCATTGATTCTGATTCTACACATTCTACTTCTGCTTCTACTTCGTCTGCTAACCCTCCTCCAAGTCCTACCCACGCCCACCATCAAACTTCTGCTGACAACTACGCCTGTTAG ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGACTCGATCCGTCAGCATCTTCTGGAAGAGAACTTAAACAAGAGTGGGGATGGGATTTGTAGTATTATTCAGGATCATCATTATAAAGGGGCGGCGGTGGAGAATGGAGTGCAGTTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAATGGAGCCAGAACGTGGCTGGGGACCTTTGAAACGGCCCAAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCGAAACTCAACTTTCCACATCTCATTGATTCTGATTCTACACATTCTACTTCTGCTTCTACTTCGTCTGCTAACCCTCCTCCAAGTCCTACCCACGCCCACCATCAAACTTCTGCTGACAACTACGCCTGTTAG
BLAST of CSPI03G07060 vs. Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2) HSP 1 Score: 115.5 bits (288), Expect = 4.7e-25 Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 1
BLAST of CSPI03G07060 vs. Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22 Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 1
BLAST of CSPI03G07060 vs. Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22 Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 1
BLAST of CSPI03G07060 vs. Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21 Identity = 53/78 (67.95%), Postives = 61/78 (78.21%), Query Frame = 1
BLAST of CSPI03G07060 vs. Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 7.0e-21 Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1
BLAST of CSPI03G07060 vs. TrEMBL
Match: A0A0A0L2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116720 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 9.1e-76 Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 1
BLAST of CSPI03G07060 vs. TrEMBL
Match: M4EV32_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 4.6e-27 Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 1
BLAST of CSPI03G07060 vs. TrEMBL
Match: A0A072TWG2_MEDTR (Ethylene response factor OS=Medicago truncatula GN=MTR_8g006840 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 4.6e-27 Identity = 64/99 (64.65%), Postives = 75/99 (75.76%), Query Frame = 1
BLAST of CSPI03G07060 vs. TrEMBL
Match: A0A078HJN1_BRANA (BnaCnng09130D protein OS=Brassica napus GN=BnaCnng09130D PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.7e-26 Identity = 72/140 (51.43%), Postives = 90/140 (64.29%), Query Frame = 1
BLAST of CSPI03G07060 vs. TrEMBL
Match: A0A0D3DZH9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.7e-26 Identity = 72/140 (51.43%), Postives = 90/140 (64.29%), Query Frame = 1
BLAST of CSPI03G07060 vs. TAIR10
Match: AT2G44840.1 (AT2G44840.1 ethylene-responsive element binding factor 13) HSP 1 Score: 115.5 bits (288), Expect = 2.7e-26 Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 1
BLAST of CSPI03G07060 vs. TAIR10
Match: AT4G17500.1 (AT4G17500.1 ethylene responsive element binding factor 1) HSP 1 Score: 101.3 bits (251), Expect = 5.2e-22 Identity = 52/90 (57.78%), Postives = 68/90 (75.56%), Query Frame = 1
BLAST of CSPI03G07060 vs. TAIR10
Match: AT5G13330.1 (AT5G13330.1 related to AP2 6l) HSP 1 Score: 101.3 bits (251), Expect = 5.2e-22 Identity = 53/88 (60.23%), Postives = 64/88 (72.73%), Query Frame = 1
BLAST of CSPI03G07060 vs. TAIR10
Match: AT3G23230.1 (AT3G23230.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 100.5 bits (249), Expect = 8.8e-22 Identity = 53/82 (64.63%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of CSPI03G07060 vs. TAIR10
Match: AT5G47220.1 (AT5G47220.1 ethylene responsive element binding factor 2) HSP 1 Score: 99.0 bits (245), Expect = 2.6e-21 Identity = 51/89 (57.30%), Postives = 69/89 (77.53%), Query Frame = 1
BLAST of CSPI03G07060 vs. NCBI nr
Match: gi|449432980|ref|XP_004134276.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis sativus]) HSP 1 Score: 290.8 bits (743), Expect = 1.3e-75 Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 1
BLAST of CSPI03G07060 vs. NCBI nr
Match: gi|659077723|ref|XP_008439349.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo]) HSP 1 Score: 229.9 bits (585), Expect = 2.7e-57 Identity = 121/139 (87.05%), Postives = 125/139 (89.93%), Query Frame = 1
BLAST of CSPI03G07060 vs. NCBI nr
Match: gi|922331648|ref|XP_013443815.1| (ethylene response factor [Medicago truncatula]) HSP 1 Score: 129.0 bits (323), Expect = 6.6e-27 Identity = 64/99 (64.65%), Postives = 75/99 (75.76%), Query Frame = 1
BLAST of CSPI03G07060 vs. NCBI nr
Match: gi|923922491|ref|XP_013730431.1| (PREDICTED: ethylene-responsive transcription factor 1-like [Brassica napus]) HSP 1 Score: 129.0 bits (323), Expect = 6.6e-27 Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 1
BLAST of CSPI03G07060 vs. NCBI nr
Match: gi|685370170|ref|XP_009118887.1| (PREDICTED: ethylene-responsive transcription factor 1-like [Brassica rapa]) HSP 1 Score: 129.0 bits (323), Expect = 6.6e-27 Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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