CSPI03G07060 (gene) Wild cucumber (PI 183967)

NameCSPI03G07060
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionEthylene-responsive transcription factor, putative
LocationChr3 : 6307248 .. 6307843 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGACTCGATCCGTCAGCATCTTCTGGAAGAGAACTTAAACAAGAGTGGGGATGGGATTTGTAGTATTATTCAGGATCATCATTATAAAGGGGCGGCGGTGGAGAATGGAGTGCAGTTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAATGGAGCCAGAACGTGGCTGGGGACCTTTGAAACGGCCCAAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCGAAACTCAACTTTCCACATCTCATTGATTCTGATTCTACACATTCTACTTCTGCTTCTACTTCGTCTGCTAACCCTCCTCCAAGTCCTACCCACGCCCACCATCAAACTTCTGCTGACAACTACGCCTGTTAGCCTGTTACTTCACTTTTTCCCAAGCCTCTCACCCCCATTTCATTTCCCACGTACTTTGCCTGCTTCCCCATCCATTCCAATTATCTACAAACCGACTATTACACACTAATAATATTATATATCAGTTATATAATTTATTTCCGATTTGCATCAGGGTGAGG

mRNA sequence

ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGACTCGATCCGTCAGCATCTTCTGGAAGAGAACTTAAACAAGAGTGGGGATGGGATTTGTAGTATTATTCAGGATCATCATTATAAAGGGGCGGCGGTGGAGAATGGAGTGCAGTTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAATGGAGCCAGAACGTGGCTGGGGACCTTTGAAACGGCCCAAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCGAAACTCAACTTTCCACATCTCATTGATTCTGATTCTACACATTCTACTTCTGCTTCTACTTCGTCTGCTAACCCTCCTCCAAGTCCTACCCACGCCCACCATCAAACTTCTGCTGACAACTACGCCTGTTAG

Coding sequence (CDS)

ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGACTCGATCCGTCAGCATCTTCTGGAAGAGAACTTAAACAAGAGTGGGGATGGGATTTGTAGTATTATTCAGGATCATCATTATAAAGGGGCGGCGGTGGAGAATGGAGTGCAGTTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAATGGAGCCAGAACGTGGCTGGGGACCTTTGAAACGGCCCAAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCGAAACTCAACTTTCCACATCTCATTGATTCTGATTCTACACATTCTACTTCTGCTTCTACTTCGTCTGCTAACCCTCCTCCAAGTCCTACCCACGCCCACCATCAAACTTCTGCTGACAACTACGCCTGTTAG
BLAST of CSPI03G07060 vs. Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 4.7e-25
Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 1

Query: 44  ENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKL 103
           + G+Q++GVRRRPWGK+AAEIRDPK+NGAR WLGT+ET ++AA+AYDRAAF++RG+KAKL
Sbjct: 87  QKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKL 146

Query: 104 NFPHLIDSDSTHSTSASTSSANPPPS 130
           NFPHLI S             +P PS
Sbjct: 147 NFPHLIGSCKYEPVRIRPRRRSPEPS 172

BLAST of CSPI03G07060 vs. Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 1

Query: 41  AAVENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAK 100
           A V  G  ++GVR+RPWGK+AAEIRDP +NGAR WLGT+ETA+EAALAYD+AA+++RG+K
Sbjct: 95  AVVPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSK 154

Query: 101 AKLNFPHLIDSDSTHSTSASTSSANPPPS 130
           A LNFPH I  +       +    +P P+
Sbjct: 155 ALLNFPHRIGLNEPEPVRLTVKRRSPEPA 183

BLAST of CSPI03G07060 vs. Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 1

Query: 41  AAVENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAK 100
           A V  G  ++GVR+RPWGK+AAEIRDP +NGAR WLGT+ETA+EAALAYD+AA+++RG+K
Sbjct: 91  AVVPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSK 150

Query: 101 AKLNFPHLIDSDSTHSTSASTSSANPPPS 130
           A LNFPH I  +       +    +P P+
Sbjct: 151 ALLNFPHRIGLNEPEPVRLTAKRRSPEPA 179

BLAST of CSPI03G07060 vs. Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21
Identity = 53/78 (67.95%), Postives = 61/78 (78.21%), Query Frame = 1

Query: 46  GVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNF 105
           G +++GVRRRPWGKYAAEIRD  R+GAR WLGTFETA+EAALAYDRAAF++RGAKA LNF
Sbjct: 56  GKKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNF 115

Query: 106 PHLIDSDSTHSTSASTSS 124
           P  I + S      S  S
Sbjct: 116 PSEIVNASVSVDKLSLCS 133

BLAST of CSPI03G07060 vs. Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.0e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1

Query: 41  AAVENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAK 100
           A +  G  ++GVRRRPWGK+AAEIRDP +NGAR WLGT+ET +EAA+AYD+AA+++RG+K
Sbjct: 97  AELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSK 156

Query: 101 AKLNFPHLIDSDSTHSTSASTSSANPPPSPTHAHHQTS 139
           A LNFPH I  +        T+     P P  +   +S
Sbjct: 157 AHLNFPHRIGLNEPEPVRV-TAKRRASPEPASSSENSS 193

BLAST of CSPI03G07060 vs. TrEMBL
Match: A0A0A0L2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116720 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 9.1e-76
Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 1

Query: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60
           MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY
Sbjct: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60

Query: 61  AAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120
           AAEIRDPKRNGARTWLGTFETA EAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS
Sbjct: 61  AAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120

Query: 121 TSSANPPPSPTHAHHQTSADNYAC 145
           TSSANPPPSPTHAHHQTSADNYAC
Sbjct: 121 TSSANPPPSPTHAHHQTSADNYAC 144

BLAST of CSPI03G07060 vs. TrEMBL
Match: M4EV32_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.6e-27
Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 1

Query: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60
           ++S+  S VLDSIR+HLLE++         S   D     +    G  FKGVRRRPWGKY
Sbjct: 5   LTSYDCSSVLDSIRRHLLEDDSESLSSFSSSSSPDLE---STSRRGGNFKGVRRRPWGKY 64

Query: 61  AAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120
           AAEIRDP ++GAR WLGT+ETA+EAA AYDRAAFK+RGAKAKLNFPHLI  D    +  +
Sbjct: 65  AAEIRDPNKHGARIWLGTYETAEEAAAAYDRAAFKLRGAKAKLNFPHLIGIDGPEPSRIT 124

Query: 121 TSSANPP 128
               + P
Sbjct: 125 KRRLSSP 128

BLAST of CSPI03G07060 vs. TrEMBL
Match: A0A072TWG2_MEDTR (Ethylene response factor OS=Medicago truncatula GN=MTR_8g006840 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.6e-27
Identity = 64/99 (64.65%), Postives = 75/99 (75.76%), Query Frame = 1

Query: 18  LEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLG 77
           +E+    SG  + S+   H  +       + ++GVRRRPWGKYAAEIRDPKRNGAR WLG
Sbjct: 96  IEDQGQSSGTSLASVA--HVQQVPTTSKRLGYRGVRRRPWGKYAAEIRDPKRNGARVWLG 155

Query: 78  TFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHS 117
           T+ETA+ AALAYDRAAFKIRG+KAKLNFPHLIDSD T S
Sbjct: 156 TYETAENAALAYDRAAFKIRGSKAKLNFPHLIDSDYTGS 192

BLAST of CSPI03G07060 vs. TrEMBL
Match: A0A078HJN1_BRANA (BnaCnng09130D protein OS=Brassica napus GN=BnaCnng09130D PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-26
Identity = 72/140 (51.43%), Postives = 90/140 (64.29%), Query Frame = 1

Query: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60
           ++S+  S VLDSIR+HLLE++         S   D     +    G  FKGVRRRPWGKY
Sbjct: 5   LTSYDCSSVLDSIRRHLLEDDSESLSSFSSSSSPDLE---STRRRGGNFKGVRRRPWGKY 64

Query: 61  AAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120
           AAEIRDP ++GAR WLGT+ETA+EAA AYDRAAFK+RGAKAKLNFPHLI  D    +  +
Sbjct: 65  AAEIRDPNKHGARIWLGTYETAEEAAAAYDRAAFKLRGAKAKLNFPHLIGIDGPEPSRIT 124

Query: 121 TSSANPPPSPTHAHHQTSAD 141
               + P S +    + + D
Sbjct: 125 KRRLSTPVSCSPVARRRNTD 141

BLAST of CSPI03G07060 vs. TrEMBL
Match: A0A0D3DZH9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-26
Identity = 72/140 (51.43%), Postives = 90/140 (64.29%), Query Frame = 1

Query: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60
           ++S+  S VLDSIR+HLLE++         S   D     +    G  FKGVRRRPWGKY
Sbjct: 5   LTSYDCSSVLDSIRRHLLEDDSESLSSFSSSSSPDLE---STRRRGGNFKGVRRRPWGKY 64

Query: 61  AAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120
           AAEIRDP ++GAR WLGT+ETA+EAA AYDRAAFK+RGAKAKLNFPHLI  D    +  +
Sbjct: 65  AAEIRDPNKHGARIWLGTYETAEEAAAAYDRAAFKLRGAKAKLNFPHLIGIDGPEPSRIT 124

Query: 121 TSSANPPPSPTHAHHQTSAD 141
               + P S +    + + D
Sbjct: 125 KRRLSTPVSCSPVARRRNTD 141

BLAST of CSPI03G07060 vs. TAIR10
Match: AT2G44840.1 (AT2G44840.1 ethylene-responsive element binding factor 13)

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-26
Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 1

Query: 44  ENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKL 103
           + G+Q++GVRRRPWGK+AAEIRDPK+NGAR WLGT+ET ++AA+AYDRAAF++RG+KAKL
Sbjct: 87  QKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKL 146

Query: 104 NFPHLIDSDSTHSTSASTSSANPPPS 130
           NFPHLI S             +P PS
Sbjct: 147 NFPHLIGSCKYEPVRIRPRRRSPEPS 172

BLAST of CSPI03G07060 vs. TAIR10
Match: AT4G17500.1 (AT4G17500.1 ethylene responsive element binding factor 1)

HSP 1 Score: 101.3 bits (251), Expect = 5.2e-22
Identity = 52/90 (57.78%), Postives = 68/90 (75.56%), Query Frame = 1

Query: 46  GVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNF 105
           G  ++GVR+RPWGK+AAEIRDP +NGAR WLGTFETA++AALAYDRAAF++RG++A LNF
Sbjct: 145 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 204

Query: 106 PHLIDSDS-----THSTSASTSSANPPPSP 131
           P  ++S         S  +S SS+N   +P
Sbjct: 205 PLRVNSGEPDPVRIKSKRSSFSSSNENGAP 234

BLAST of CSPI03G07060 vs. TAIR10
Match: AT5G13330.1 (AT5G13330.1 related to AP2 6l)

HSP 1 Score: 101.3 bits (251), Expect = 5.2e-22
Identity = 53/88 (60.23%), Postives = 64/88 (72.73%), Query Frame = 1

Query: 49  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHL 108
           ++GVR+RPWGK+AAEIRDPK+  AR WLGTFETA+EAALAYDRAA K +G KAKLNFP  
Sbjct: 39  YRGVRQRPWGKWAAEIRDPKK-AARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPER 98

Query: 109 IDSDSTHST------SASTSSANPPPSP 131
           +   +T +T        S S  +PPP P
Sbjct: 99  VQGPTTTTTISHAPRGVSESMNSPPPRP 125

BLAST of CSPI03G07060 vs. TAIR10
Match: AT3G23230.1 (AT3G23230.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 100.5 bits (249), Expect = 8.8e-22
Identity = 53/82 (64.63%), Postives = 63/82 (76.83%), Query Frame = 1

Query: 48  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPH 107
           +F+GVRRRPWGK+AAEIRDP RNGAR WLGTFETA+EAA AYDRAAF +RG  A LNFP+
Sbjct: 19  RFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPN 78

Query: 108 ----LIDSDSTHSTSASTSSAN 126
                +D  S     AS+SS++
Sbjct: 79  EYYPRMDDYSLRPPYASSSSSS 100

BLAST of CSPI03G07060 vs. TAIR10
Match: AT5G47220.1 (AT5G47220.1 ethylene responsive element binding factor 2)

HSP 1 Score: 99.0 bits (245), Expect = 2.6e-21
Identity = 51/89 (57.30%), Postives = 69/89 (77.53%), Query Frame = 1

Query: 49  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHL 108
           ++GVR+RPWGK+AAEIRDP +NGAR WLGTFETA++AALAYD AAF++RG++A LNFP  
Sbjct: 117 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLR 176

Query: 109 IDS--------DSTHSTSASTSSANPPPS 130
           ++S         S  S+S+S+SS++   S
Sbjct: 177 VNSGEPDPVRITSKRSSSSSSSSSSSTSS 205

BLAST of CSPI03G07060 vs. NCBI nr
Match: gi|449432980|ref|XP_004134276.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis sativus])

HSP 1 Score: 290.8 bits (743), Expect = 1.3e-75
Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 1

Query: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60
           MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY
Sbjct: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60

Query: 61  AAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120
           AAEIRDPKRNGARTWLGTFETA EAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS
Sbjct: 61  AAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120

Query: 121 TSSANPPPSPTHAHHQTSADNYAC 145
           TSSANPPPSPTHAHHQTSADNYAC
Sbjct: 121 TSSANPPPSPTHAHHQTSADNYAC 144

BLAST of CSPI03G07060 vs. NCBI nr
Match: gi|659077723|ref|XP_008439349.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 2.7e-57
Identity = 121/139 (87.05%), Postives = 125/139 (89.93%), Query Frame = 1

Query: 1   MSSWRESDVLDSIRQHLLEENLNKSGDG----ICSIIQDHHYKGAAVENGVQFKGVRRRP 60
           MSSWRESDVL+SIRQHLL+ENLNKSGDG    I SIIQDHHYK AAVE   +FKGVRRRP
Sbjct: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVE---KFKGVRRRP 60

Query: 61  WGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHS 120
           WGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDS ST+S
Sbjct: 61  WGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYS 120

Query: 121 TSASTSSANPPPSPTHAHH 136
           TSASTSS   PPSPTHA H
Sbjct: 121 TSASTSSTKRPPSPTHADH 136

BLAST of CSPI03G07060 vs. NCBI nr
Match: gi|922331648|ref|XP_013443815.1| (ethylene response factor [Medicago truncatula])

HSP 1 Score: 129.0 bits (323), Expect = 6.6e-27
Identity = 64/99 (64.65%), Postives = 75/99 (75.76%), Query Frame = 1

Query: 18  LEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLG 77
           +E+    SG  + S+   H  +       + ++GVRRRPWGKYAAEIRDPKRNGAR WLG
Sbjct: 96  IEDQGQSSGTSLASVA--HVQQVPTTSKRLGYRGVRRRPWGKYAAEIRDPKRNGARVWLG 155

Query: 78  TFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHS 117
           T+ETA+ AALAYDRAAFKIRG+KAKLNFPHLIDSD T S
Sbjct: 156 TYETAENAALAYDRAAFKIRGSKAKLNFPHLIDSDYTGS 192

BLAST of CSPI03G07060 vs. NCBI nr
Match: gi|923922491|ref|XP_013730431.1| (PREDICTED: ethylene-responsive transcription factor 1-like [Brassica napus])

HSP 1 Score: 129.0 bits (323), Expect = 6.6e-27
Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 1

Query: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60
           ++S+  S VLDSIR+HLLE++         S   D     +    G  FKGVRRRPWGKY
Sbjct: 5   LTSYDCSSVLDSIRRHLLEDDSESLSSFSSSSSPDLE---STSRRGGNFKGVRRRPWGKY 64

Query: 61  AAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120
           AAEIRDP ++GAR WLGT+ETA+EAA AYDRAAFK+RGAKAKLNFPHLI  D    +  +
Sbjct: 65  AAEIRDPNKHGARIWLGTYETAEEAAAAYDRAAFKLRGAKAKLNFPHLIGIDGPEPSRIT 124

Query: 121 TSSANPP 128
               + P
Sbjct: 125 KRRLSTP 128

BLAST of CSPI03G07060 vs. NCBI nr
Match: gi|685370170|ref|XP_009118887.1| (PREDICTED: ethylene-responsive transcription factor 1-like [Brassica rapa])

HSP 1 Score: 129.0 bits (323), Expect = 6.6e-27
Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 1

Query: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60
           ++S+  S VLDSIR+HLLE++         S   D     +    G  FKGVRRRPWGKY
Sbjct: 5   LTSYDCSSVLDSIRRHLLEDDSESLSSFSSSSSPDLE---STSRRGGNFKGVRRRPWGKY 64

Query: 61  AAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120
           AAEIRDP ++GAR WLGT+ETA+EAA AYDRAAFK+RGAKAKLNFPHLI  D    +  +
Sbjct: 65  AAEIRDPNKHGARIWLGTYETAEEAAAAYDRAAFKLRGAKAKLNFPHLIGIDGPEPSRIT 124

Query: 121 TSSANPP 128
               + P
Sbjct: 125 KRRLSSP 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ERF99_ARATH4.7e-2562.79Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=... [more]
ERF2_NICSY1.3e-2256.18Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 ... [more]
ERF2_TOBAC1.3e-2256.18Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=... [more]
PTI5_SOLLC1.4e-2167.95Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu... [more]
ERF1_TOBAC7.0e-2151.02Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
A0A0A0L2V9_CUCSA9.1e-7699.31Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116720 PE=4 SV=1[more]
M4EV32_BRARP4.6e-2755.12Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A072TWG2_MEDTR4.6e-2764.65Ethylene response factor OS=Medicago truncatula GN=MTR_8g006840 PE=4 SV=1[more]
A0A078HJN1_BRANA1.7e-2651.43BnaCnng09130D protein OS=Brassica napus GN=BnaCnng09130D PE=4 SV=1[more]
A0A0D3DZH9_BRAOL1.7e-2651.43Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G44840.12.7e-2662.79 ethylene-responsive element binding factor 13[more]
AT4G17500.15.2e-2257.78 ethylene responsive element binding factor 1[more]
AT5G13330.15.2e-2260.23 related to AP2 6l[more]
AT3G23230.18.8e-2264.63 Integrase-type DNA-binding superfamily protein[more]
AT5G47220.12.6e-2157.30 ethylene responsive element binding factor 2[more]
Match NameE-valueIdentityDescription
gi|449432980|ref|XP_004134276.1|1.3e-7599.31PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis sativus][more]
gi|659077723|ref|XP_008439349.1|2.7e-5787.05PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo][more]
gi|922331648|ref|XP_013443815.1|6.6e-2764.65ethylene response factor [Medicago truncatula][more]
gi|923922491|ref|XP_013730431.1|6.6e-2755.12PREDICTED: ethylene-responsive transcription factor 1-like [Brassica napus][more]
gi|685370170|ref|XP_009118887.1|6.6e-2755.12PREDICTED: ethylene-responsive transcription factor 1-like [Brassica rapa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0006952 defense response
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0002376 immune system process
biological_process GO:0043067 regulation of programmed cell death
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009753 response to jasmonic acid
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G07060.1CSPI03G07060.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 49..60
score: 1.0E-12coord: 88..108
score: 1.0
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 48..107
score: 2.7
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 49..98
score: 8.5
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 48..112
score: 7.5
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 48..106
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 49..107
score: 5.56
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 48..130
score: 2.3
NoneNo IPR availablePANTHERPTHR31190:SF21ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13coord: 48..130
score: 2.3