Cla021069 (gene) Watermelon (97103) v1

Overview
NameCla021069
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEthylene responsive transcription factor 1b (AHRD V1 *-** C0J9I8_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
LocationChr5 : 124053 .. 124535 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGAGTCGATCCGTCAACATCTTCTGGAAGAAAATAACAGTGGGAGTGGGAGTGGGAATGGGGATGGCCGGGAATCAAGTGCAATTATTATTCAGCATCATAAGAAGGAGGCGGCGAAGAATGAAGTGCAACTACTGCAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATACGCGGCGGAGATCAGAGATCCAAAGAGAAACGGAGCCAGAACATGGCTGGGGACGTTTGACACCGCCCAAGACGCAGCTCTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCAAAGCTCAACTTTCCGCATCTCATTGATTCTGATTCTATTTGGTCCACTTCTACTTCCACTTCTGCTTCTACTTCCACTTCCACTTCTGCTTCTACTAAGCGTCCTCCGAGTCCAACCCACGCCCAGCATCGAACTTCTGCTTCAAAACGCCGCTGA

mRNA sequence

ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGAGTCGATCCGTCAACATCTTCTGGAAGAAAATAACAGTGGGAGTGGGAGTGGGAATGGGGATGGCCGGGAATCAAGTGCAATTATTATTCAGCATCATAAGAAGGAGGCGGCGAAGAATGAAGTGCAACTACTGCAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATACGCGGCGGAGATCAGAGATCCAAAGAGAAACGGAGCCAGAACATGGCTGGGGACGTTTGACACCGCCCAAGACGCAGCTCTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCAAAGCTCAACTTTCCGCATCTCATTGATTCTGATTCTATTTGGTCCACTTCTACTTCCACTTCTGCTTCTACTTCCACTTCCACTTCTGCTTCTACTAAGCGTCCTCCGAGTCCAACCCACGCCCAGCATCGAACTTCTGCTTCAAAACGCCGCTGA

Coding sequence (CDS)

ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGAGTCGATCCGTCAACATCTTCTGGAAGAAAATAACAGTGGGAGTGGGAGTGGGAATGGGGATGGCCGGGAATCAAGTGCAATTATTATTCAGCATCATAAGAAGGAGGCGGCGAAGAATGAAGTGCAACTACTGCAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATACGCGGCGGAGATCAGAGATCCAAAGAGAAACGGAGCCAGAACATGGCTGGGGACGTTTGACACCGCCCAAGACGCAGCTCTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCAAAGCTCAACTTTCCGCATCTCATTGATTCTGATTCTATTTGGTCCACTTCTACTTCCACTTCTGCTTCTACTTCCACTTCCACTTCTGCTTCTACTAAGCGTCCTCCGAGTCCAACCCACGCCCAGCATCGAACTTCTGCTTCAAAACGCCGCTGA

Protein sequence

MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKRR
Homology
[Close]
BLAST of Cla021069 vs. Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 1.4e-25
Identity = 57/105 (54.29%), Postives = 70/105 (66.67%), Query Frame = 1 

Query: 55  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFP 114
           +Q++GVRRRPWGK+AAEIRDPK+NGAR WLGT++T +DAA+AYDRAAF++RG+KAKLNFP
Sbjct: 90  MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149

Query: 115 HLIDSDSIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSASKR 160
           HLI            S           +R P P+ +   TS  KR
Sbjct: 150 HLIG-----------SCKYEPVRIRPRRRSPEPSVSDQLTSEQKR 183

[Close]
BLAST of Cla021069 vs. Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.8e-24
Identity = 53/93 (56.99%), Postives = 74/93 (79.57%), Query Frame = 1 

Query: 52  VQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKL 111
           V+   ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TA+DAALAYD AAF++RG++A L
Sbjct: 112 VKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALL 171

Query: 112 NFPHLIDS---DSIWSTSTSTSASTSTSTSAST 142
           NFP  ++S   D +  TS  +S+S+S+S+S+++
Sbjct: 172 NFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTS 204

[Close]
BLAST of Cla021069 vs. Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 2.9e-23
Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 1 

Query: 57  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHL 116
           ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TA+DAALAYDRAAF++RG++A LNFP  
Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 207

Query: 117 IDS---DSIWSTSTSTSASTSTSTSASTKR 144
           ++S   D +   S  +S S+S    A  KR
Sbjct: 208 VNSGEPDPVRIKSKRSSFSSSNENGAPKKR 237

[Close]
BLAST of Cla021069 vs. Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-23
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 1 

Query: 56  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPH 115
           +F+GVRRRPWGK+AAEIRDP RNGAR WLGTF+TA++AA AYDRAAF +RG  A LNFP+
Sbjct: 19  RFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPN 78

Query: 116 ----LIDSDSI---WSTSTSTSASTSTSTSAS 141
                +D  S+   +++S+S+S+S STST+ S
Sbjct: 79  EYYPRMDDYSLRPPYASSSSSSSSGSTSTNVS 110

[Close]
BLAST of Cla021069 vs. Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.4e-23
Identity = 51/86 (59.30%), Postives = 66/86 (76.74%), Query Frame = 1 

Query: 56  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPH 115
           +++GVRRRPWGKYAAEIRD +++G R WLGTFDTA++AA AYD+AA+ +RG  A LNFPH
Sbjct: 14  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 116 LIDSDSIWSTSTSTSASTSTSTSAST 142
             +  S  S+ST+ + S+S S SAS+
Sbjct: 74  EYNMGSGVSSSTAMAGSSSASASASS 99

[Close]
BLAST of Cla021069 vs. TrEMBL
Match: A0A0A0L2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116720 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.8e-49
Identity = 111/156 (71.15%), Postives = 118/156 (75.64%), Query Frame = 1 

Query: 1   MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGV 60
           MSSWRESDVL+SIRQHLLEEN + SG G        +II  HH K AA      +QFKGV
Sbjct: 1   MSSWRESDVLDSIRQHLLEENLNKSGDG------ICSIIQDHHYKGAAVENG--VQFKGV 60

Query: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSD 120
           RRRPWGKYAAEIRDPKRNGARTWLGTF+TA +AALAYDRAAFKIRGAKAKLNFPHLIDSD
Sbjct: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSD 120

Query: 121 SIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSA 157
           S  STS STS         S   PPSPTHA H+TSA
Sbjct: 121 STHSTSASTS---------SANPPPSPTHAHHQTSA 139

[Close]
BLAST of Cla021069 vs. TrEMBL
Match: W9QSR5_9ROSA (Ethylene-responsive transcription factor 13 OS=Morus notabilis GN=L484_021851 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.0e-28
Identity = 75/146 (51.37%), Postives = 98/146 (67.12%), Query Frame = 1 

Query: 9   VLESIRQHLLEE---NNSGSGSGN-GDGRESSAII-IQHHKKEAAKNEVQL--LQFKGVR 68
           +LES+RQHLL++   N   +   N    RE++ +  I+ +++ A +       + F+GVR
Sbjct: 14  LLESVRQHLLDDDCVNPPATFFANVAPVREATRMTGIEQYQEGARERHAPSGGVHFRGVR 73

Query: 69  RRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDS 128
           RRPWGKYAAEIRDPK+NGAR WLGT++T +DAALAYDRAAFK+RG+KAKLNFPHLI S  
Sbjct: 74  RRPWGKYAAEIRDPKKNGARVWLGTYETQEDAALAYDRAAFKMRGSKAKLNFPHLIGSSH 133

Query: 129 IWSTSTSTSASTSTSTSASTKRPPSP 148
               +  T    S  TSAS+    SP
Sbjct: 134 ELELARVTPKRRSPETSASSGDGGSP 159

[Close]
BLAST of Cla021069 vs. TrEMBL
Match: A0A0A0L893_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116730 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.8e-28
Identity = 74/137 (54.01%), Postives = 93/137 (67.88%), Query Frame = 1 

Query: 10  LESIRQHLLEE--------NN----------SGSGSG-------NGDGRESSAIIIQHHK 69
           LE IR+HLLE+        NN          S SG+G       N    + S+III+ + 
Sbjct: 19  LEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNP 78

Query: 70  KEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKI 122
           +E ++   + LQF+GVRRRPWGKYAAEIRDP + GAR WLGT+ TAQDAALAYDRAAF++
Sbjct: 79  EEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQM 138

[Close]
BLAST of Cla021069 vs. TrEMBL
Match: B9MV98_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s04600g PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-27
Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = 1 

Query: 55  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFP 114
           LQ+KGVRRRPWGKYAAEIRDPK+NGAR WLGT++T +DAALAYDRAAFK+RG+KAKLNFP
Sbjct: 116 LQYKGVRRRPWGKYAAEIRDPKKNGARMWLGTYETPEDAALAYDRAAFKMRGSKAKLNFP 175

Query: 115 HLIDSDSIWSTSTSTSASTSTSTSAST 142
           HLI S++ W  +  TS   S+   +S+
Sbjct: 176 HLIGSNNNWEPTRVTSKKRSSPEPSSS 202

[Close]
BLAST of Cla021069 vs. TrEMBL
Match: A0A078HJN1_BRANA (BnaCnng09130D protein OS=Brassica napus GN=BnaCnng09130D PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.9e-27
Identity = 73/144 (50.69%), Postives = 95/144 (65.97%), Query Frame = 1 

Query: 1   MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGV 60
           ++S+  S VL+SIR+HLLE+++    S +     SS+  ++  ++           FKGV
Sbjct: 5   LTSYDCSSVLDSIRRHLLEDDSESLSSFSS----SSSPDLESTRRRGGN-------FKGV 64

Query: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSD 120
           RRRPWGKYAAEIRDP ++GAR WLGT++TA++AA AYDRAAFK+RGAKAKLNFPHLI  D
Sbjct: 65  RRRPWGKYAAEIRDPNKHGARIWLGTYETAEEAAAAYDRAAFKLRGAKAKLNFPHLIGID 124

Query: 121 SIW-STSTSTSASTSTSTSASTKR 144
               S  T    ST  S S   +R
Sbjct: 125 GPEPSRITKRRLSTPVSCSPVARR 137

[Close]
BLAST of Cla021069 vs. NCBI nr
Match: gi|659077723|ref|XP_008439349.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo])

HSP 1 Score: 212.2 bits (539), Expect = 6.5e-52
Identity = 114/152 (75.00%), Postives = 121/152 (79.61%), Query Frame = 1 

Query: 1   MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGV 60
           MSSWRESDVLESIRQHLL+EN + SG G+GDG  S  II  HH K AA  +     FKGV
Sbjct: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFS--IIQDHHYKAAAVEK-----FKGV 60

Query: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSD 120
           RRRPWGKYAAEIRDPKRNGARTWLGTF+TAQ+AALAYDRAAFKIRGAKAKLNFPHLIDS 
Sbjct: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSA 120

Query: 121 SIWSTSTSTSASTSTSTSASTKRPPSPTHAQH 153
           S +STS STS         STKRPPSPTHA H
Sbjct: 121 STYSTSASTS---------STKRPPSPTHADH 136

[Close]
BLAST of Cla021069 vs. NCBI nr
Match: gi|449432980|ref|XP_004134276.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 4.0e-49
Identity = 111/156 (71.15%), Postives = 118/156 (75.64%), Query Frame = 1 

Query: 1   MSSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGV 60
           MSSWRESDVL+SIRQHLLEEN + SG G        +II  HH K AA      +QFKGV
Sbjct: 1   MSSWRESDVLDSIRQHLLEENLNKSGDG------ICSIIQDHHYKGAAVENG--VQFKGV 60

Query: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSD 120
           RRRPWGKYAAEIRDPKRNGARTWLGTF+TA +AALAYDRAAFKIRGAKAKLNFPHLIDSD
Sbjct: 61  RRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSD 120

Query: 121 SIWSTSTSTSASTSTSTSASTKRPPSPTHAQHRTSA 157
           S  STS STS         S   PPSPTHA H+TSA
Sbjct: 121 STHSTSASTS---------SANPPPSPTHAHHQTSA 139

[Close]
BLAST of Cla021069 vs. NCBI nr
Match: gi|729353867|ref|XP_010544359.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Tarenaya hassleriana])

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 68/121 (56.20%), Postives = 89/121 (73.55%), Query Frame = 1 

Query: 2   SSWRESDVLESIRQHLLEENNSGSGSGNGDGRESSAIIIQHHKKEAAKNEVQLLQFKGVR 61
           SS   S VLESIR++LLEE+ S     + +         + ++K    + V+   ++GVR
Sbjct: 10  SSSSSSKVLESIRRYLLEEDESEEPRSSTEE--------EGNRKREPPSPVRGGSYRGVR 69

Query: 62  RRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDS 121
           RRPWGKYAAEIRDPK+NGAR WLGT++TA+DAA+AYDRAAF++RGAKAKLNFPHLI +D 
Sbjct: 70  RRPWGKYAAEIRDPKKNGARIWLGTYETAEDAAMAYDRAAFEMRGAKAKLNFPHLIGTDG 122

Query: 122 I 123
           +
Sbjct: 130 V 122

[Close]
BLAST of Cla021069 vs. NCBI nr
Match: gi|703072573|ref|XP_010089319.1| (Ethylene-responsive transcription factor 13 [Morus notabilis])

HSP 1 Score: 132.1 bits (331), Expect = 8.6e-28
Identity = 75/146 (51.37%), Postives = 98/146 (67.12%), Query Frame = 1 

Query: 9   VLESIRQHLLEE---NNSGSGSGN-GDGRESSAII-IQHHKKEAAKNEVQL--LQFKGVR 68
           +LES+RQHLL++   N   +   N    RE++ +  I+ +++ A +       + F+GVR
Sbjct: 14  LLESVRQHLLDDDCVNPPATFFANVAPVREATRMTGIEQYQEGARERHAPSGGVHFRGVR 73

Query: 69  RRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKIRGAKAKLNFPHLIDSDS 128
           RRPWGKYAAEIRDPK+NGAR WLGT++T +DAALAYDRAAFK+RG+KAKLNFPHLI S  
Sbjct: 74  RRPWGKYAAEIRDPKKNGARVWLGTYETQEDAALAYDRAAFKMRGSKAKLNFPHLIGSSH 133

Query: 129 IWSTSTSTSASTSTSTSASTKRPPSP 148
               +  T    S  TSAS+    SP
Sbjct: 134 ELELARVTPKRRSPETSASSGDGGSP 159

[Close]
BLAST of Cla021069 vs. NCBI nr
Match: gi|449432982|ref|XP_004134277.1| (PREDICTED: ethylene-responsive transcription factor 1 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27
Identity = 74/137 (54.01%), Postives = 93/137 (67.88%), Query Frame = 1 

Query: 10  LESIRQHLLEE--------NN----------SGSGSG-------NGDGRESSAIIIQHHK 69
           LE IR+HLLE+        NN          S SG+G       N    + S+III+ + 
Sbjct: 19  LEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNP 78

Query: 70  KEAAKNEVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFKI 122
           +E ++   + LQF+GVRRRPWGKYAAEIRDP + GAR WLGT+ TAQDAALAYDRAAF++
Sbjct: 79  EEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQM 138

The following BLAST results are available for this feature:
BLAST of Cla021069 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF99_ARATH1.4e-2554.29Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=... [more]
EF101_ARATH9.8e-2456.99Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 ... [more]
EF100_ARATH2.9e-2358.89Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=... [more]
ERF98_ARATH3.7e-2360.87Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF09... [more]
ERF96_ARATH6.4e-2359.30Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF09... [more]
BLAST of Cla021069 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2V9_CUCSA2.8e-4971.15Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116720 PE=4 SV=1[more]
W9QSR5_9ROSA6.0e-2851.37Ethylene-responsive transcription factor 13 OS=Morus notabilis GN=L484_021851 PE... [more]
A0A0A0L893_CUCSA7.8e-2854.01Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116730 PE=4 SV=1[more]
B9MV98_POPTR1.7e-2768.97Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s04600g PE=4 SV=1[more]
A0A078HJN1_BRANA3.9e-2750.69BnaCnng09130D protein OS=Brassica napus GN=BnaCnng09130D PE=4 SV=1[more]
BLAST of Cla021069 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077723|ref|XP_008439349.1|6.5e-5275.00PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo][more]
gi|449432980|ref|XP_004134276.1|4.0e-4971.15PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis sativus][more]
gi|729353867|ref|XP_010544359.1|1.7e-2856.20PREDICTED: ethylene-responsive transcription factor 13-like [Tarenaya hasslerian... [more]
gi|703072573|ref|XP_010089319.1|8.6e-2851.37Ethylene-responsive transcription factor 13 [Morus notabilis][more]
gi|449432982|ref|XP_004134277.1|1.1e-2754.01PREDICTED: ethylene-responsive transcription factor 1 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0006228 UTP biosynthetic process
biological_process GO:0006165 nucleoside diphosphate phosphorylation
biological_process GO:0006183 GTP biosynthetic process
biological_process GO:0006241 CTP biosynthetic process
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0043067 regulation of programmed cell death
biological_process GO:0002376 immune system process
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0006952 defense response
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0009414 response to water deprivation
biological_process GO:0009723 response to ethylene
biological_process GO:0009733 response to auxin
biological_process GO:0002679 respiratory burst involved in defense response
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0035556 intracellular signal transduction
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0004550 nucleoside diphosphate kinase activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU39916watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021069Cla021069.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU39916WMU39916transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 96..116
score: 1.2E-12coord: 57..68
score: 1.2
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 56..115
score: 3.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 57..106
score: 1.6
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 56..120
score: 3.7
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 56..114
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 57..115
score: 6.08
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 56..153
score: 2.2
NoneNo IPR availablePANTHERPTHR31190:SF21ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13coord: 56..153
score: 2.2