CmaCh06G009360 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G009360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ethylene-responsive transcription factor 13
Location	Cma_Chr06 : 6326787 .. 6327420 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAGTAACAGCAATTGTTCACAAGGGTCGTCGTCGTCGGAGGTGTTTCTGTTGGAGTGGATTCGGCGACATCTTTTGGAGGACGAGTTGGATTCGGTTGGAGGATTAGGGAAAAATACTCCGAGTTTGAAGAGTGGTGATGGGGTTACGGATATCGAGGCCCCCGGGAAAGGGAGTTCGATTAGAGGGCTGCAGTTTAGAGGAGTGAGGAGGAGGCCATGGGGGAAGTACGCAGCAGAGATCAGAGACCCCAACAGAAAAGGGGCTCGGATATGGCTGGGGACATACCAGACCGCTGAAGAGGCTGCTTTGGCTTACGACCGAGCTGCTTTTCAGATGCGGGGAGCCAAGGCCAAGCTCAACTTTCCTCACATGATTGGTTCCGCGGAGGCGCTGATTGGCATAGGCTGCTGTTACCCTAAGCGCGCTTCCCCTAATTCCCCTCCGCCCCTATTCAGCGTCAAGCGCCCTAGAACTGACTCGCCCTCAATGCCACGATGTTAAACTTCATAAATCCCTACCACTACTCATATGCATCATGTTTGCCTTCCCTTGCCTAATGGATTTTGTATCCCTATGCTTATGCTTATGTAAATTGTTCTCCCCTTTTTCTTTTACTTCAGGGGATTGA

mRNA sequence

ATGTCGAGTAACAGCAATTGTTCACAAGGGTCGTCGTCGTCGGAGGTGTTTCTGTTGGAGTGGATTCGGCGACATCTTTTGGAGGACGAGTTGGATTCGGTTGGAGGATTAGGGAAAAATACTCCGAGTTTGAAGAGTGGTGATGGGGTTACGGATATCGAGGCCCCCGGGAAAGGGAGTTCGATTAGAGGGCTGCAGTTTAGAGGAGTGAGGAGGAGGCCATGGGGGAAGTACGCAGCAGAGATCAGAGACCCCAACAGAAAAGGGGCTCGGATATGGCTGGGGACATACCAGACCGCTGAAGAGGCTGCTTTGGCTTACGACCGAGCTGCTTTTCAGATGCGGGGAGCCAAGGCCAAGCTCAACTTTCCTCACATGATTGGTTCCGCGGAGGCGCTGATTGGCATAGGCTGCTGTTACCCTAAGCGCGCTTCCCCTAATTCCCCTCCGCCCCTATTCAGCGTCAAGCGCCCTAGAACTGACTCGCCCTCAATGCCACGATGGGATTGA

Coding sequence (CDS)

ATGTCGAGTAACAGCAATTGTTCACAAGGGTCGTCGTCGTCGGAGGTGTTTCTGTTGGAGTGGATTCGGCGACATCTTTTGGAGGACGAGTTGGATTCGGTTGGAGGATTAGGGAAAAATACTCCGAGTTTGAAGAGTGGTGATGGGGTTACGGATATCGAGGCCCCCGGGAAAGGGAGTTCGATTAGAGGGCTGCAGTTTAGAGGAGTGAGGAGGAGGCCATGGGGGAAGTACGCAGCAGAGATCAGAGACCCCAACAGAAAAGGGGCTCGGATATGGCTGGGGACATACCAGACCGCTGAAGAGGCTGCTTTGGCTTACGACCGAGCTGCTTTTCAGATGCGGGGAGCCAAGGCCAAGCTCAACTTTCCTCACATGATTGGTTCCGCGGAGGCGCTGATTGGCATAGGCTGCTGTTACCCTAAGCGCGCTTCCCCTAATTCCCCTCCGCCCCTATTCAGCGTCAAGCGCCCTAGAACTGACTCGCCCTCAATGCCACGATGGGATTGA

Protein sequence

MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLKSGDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPNSPPPLFSVKRPRTDSPSMPRWD

Homology

[Close]

BLAST of CmaCh06G009360 vs. Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 7.7e-27
Identity = 61/95 (64.21%), Postives = 73/95 (76.84%), Query Frame = 1


Query: 63  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLN 122
           +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY+T E+AA+AYDRAAFQ+RG+KAKLN
Sbjct: 88  KGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLN 147

Query: 123 FPHMIGSAEALIGIGCCY-PKRASP--NSPPPLFS 155
           FPH+IGS        C Y P R  P   SP P  S
Sbjct: 148 FPHLIGS--------CKYEPVRIRPRRRSPEPSVS 174

[Close]

BLAST of CmaCh06G009360 vs. Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-24
Identity = 50/69 (72.46%), Postives = 61/69 (88.41%), Query Frame = 1


Query: 63  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLN 122
           +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY+TAEEAALAYD+AA++MRG+KA LN
Sbjct: 95  KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLN 154

Query: 123 FPHMIGSAE 132
           FPH IG  E
Sbjct: 155 FPHRIGLNE 163

[Close]

BLAST of CmaCh06G009360 vs. Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-24
Identity = 50/69 (72.46%), Postives = 61/69 (88.41%), Query Frame = 1


Query: 63  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLN 122
           +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY+TAEEAALAYD+AA++MRG+KA LN
Sbjct: 99  KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLN 158

Query: 123 FPHMIGSAE 132
           FPH IG  E
Sbjct: 159 FPHRIGLNE 167

[Close]

BLAST of CmaCh06G009360 vs. Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-24
Identity = 50/69 (72.46%), Postives = 60/69 (86.96%), Query Frame = 1


Query: 63  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLN 122
           RG  +RGVRRRPWGK+AAEIRDP + GAR+WLGTY+T EEAA+AYD+AA++MRG+KA LN
Sbjct: 101 RGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLN 160

Query: 123 FPHMIGSAE 132
           FPH IG  E
Sbjct: 161 FPHRIGLNE 169

[Close]

BLAST of CmaCh06G009360 vs. Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-23
Identity = 52/71 (73.24%), Postives = 60/71 (84.51%), Query Frame = 1


Query: 64  GLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNF 123
           G ++RGVRRRPWGKYAAEIRD  R GAR+WLGT++TAEEAALAYDRAAF+MRGAKA LNF
Sbjct: 56  GKKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNF 115

Query: 124 PHMIGSAEALI 135
           P  I +A   +
Sbjct: 116 PSEIVNASVSV 126

[Close]

BLAST of CmaCh06G009360 vs. TrEMBL
Match: A0A0A0L893_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116730 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.7e-31
Identity = 85/153 (55.56%), Postives = 99/153 (64.71%), Query Frame = 1


Query: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELD-----------------SVGGLG----- 60
           M S+S+ S   SSS++F LE IRRHLLED+L                  S  G G     
Sbjct: 1   MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSN 60

Query: 61  KNTPSLKSGDGVTDIEAPGKGSSIR--GLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGT 120
            N   +     +   + P + S  R  GLQFRGVRRRPWGKYAAEIRDP++KGARIWLGT
Sbjct: 61  NNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGT 120

Query: 121 YQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 130
           Y TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 121 YHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 153

[Close]

BLAST of CmaCh06G009360 vs. TrEMBL
Match: W9QSR5_9ROSA (Ethylene-responsive transcription factor 13 OS=Morus notabilis GN=L484_021851 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.1e-31
Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 1


Query: 12  SSSEVFLLEWIRRHLLEDE-LDSVGGLGKNTPSLKSGDGVTDIEAPGKGSSIR-----GL 71
           +S+++ LLE +R+HLL+D+ ++       N   ++    +T IE   +G+  R     G+
Sbjct: 8   NSADMALLESVRQHLLDDDCVNPPATFFANVAPVREATRMTGIEQYQEGARERHAPSGGV 67

Query: 72  QFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPH 131
            FRGVRRRPWGKYAAEIRDP + GAR+WLGTY+T E+AALAYDRAAF+MRG+KAKLNFPH
Sbjct: 68  HFRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETQEDAALAYDRAAFKMRGSKAKLNFPH 127

Query: 132 MIGSAEALIGIGCCYPKRASPNS 149
           +IGS+  L  +    PKR SP +
Sbjct: 128 LIGSSHEL-ELARVTPKRRSPET 149

[Close]

BLAST of CmaCh06G009360 vs. TrEMBL
Match: M4EV32_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-29
Identity = 70/112 (62.50%), Postives = 85/112 (75.89%), Query Frame = 1


Query: 18  LLEWIRRHLLEDELDSVGGLGKNT-PSLKSGDGVTDIEAPGKGSSIRGLQFRGVRRRPWG 77
           +L+ IRRHLLED+ +S+     ++ P L+S             +S RG  F+GVRRRPWG
Sbjct: 13  VLDSIRRHLLEDDSESLSSFSSSSSPDLES-------------TSRRGGNFKGVRRRPWG 72

Query: 78  KYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIG 129
           KYAAEIRDPN+ GARIWLGTY+TAEEAA AYDRAAF++RGAKAKLNFPH+IG
Sbjct: 73  KYAAEIRDPNKHGARIWLGTYETAEEAAAAYDRAAFKLRGAKAKLNFPHLIG 111

[Close]

BLAST of CmaCh06G009360 vs. TrEMBL
Match: K7L178_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.4e-29
Identity = 73/151 (48.34%), Postives = 95/151 (62.91%), Query Frame = 1


Query: 2   SSNSNCSQGSSSSEVFLLEWIRRHLLEDELD--------------------SVGGLGKNT 61
           S  +N +    S +  LLE I+R+LL+D  D                     +  LG  T
Sbjct: 9   SQMNNFNTTLESDDFALLESIQRYLLDDNEDFNSLTEVLATPNNNVNAVNSPLSSLGHAT 68

Query: 62  PSLKSGDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAE 121
            +   G G +  EA  +G  +R   ++GVRRRPWGK+AAEIRDPNR GAR+WLGTY +AE
Sbjct: 69  TAATEGRGASSAEA--RGGHVRNQNYKGVRRRPWGKFAAEIRDPNRNGARVWLGTYNSAE 128

Query: 122 EAALAYDRAAFQMRGAKAKLNFPHMIGSAEA 133
           +AALAYDRAAF+MRG+KAKLNFPH+IG ++A
Sbjct: 129 DAALAYDRAAFEMRGSKAKLNFPHLIGCSDA 157

[Close]

BLAST of CmaCh06G009360 vs. TrEMBL
Match: A0A0R0J8G6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G113800 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.4e-29
Identity = 72/148 (48.65%), Postives = 94/148 (63.51%), Query Frame = 1


Query: 5   SNCSQGSSSSEVFLLEWIRRHLLEDELD--------------------SVGGLGKNTPSL 64
           +N +    S +  LLE I+R+LL+D  D                     +  LG  T + 
Sbjct: 2   NNFNTTLESDDFALLESIQRYLLDDNEDFNSLTEVLATPNNNVNAVNSPLSSLGHATTAA 61

Query: 65  KSGDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAA 124
             G G +  EA  +G  +R   ++GVRRRPWGK+AAEIRDPNR GAR+WLGTY +AE+AA
Sbjct: 62  TEGRGASSAEA--RGGHVRNQNYKGVRRRPWGKFAAEIRDPNRNGARVWLGTYNSAEDAA 121

Query: 125 LAYDRAAFQMRGAKAKLNFPHMIGSAEA 133
           LAYDRAAF+MRG+KAKLNFPH+IG ++A
Sbjct: 122 LAYDRAAFEMRGSKAKLNFPHLIGCSDA 147

[Close]

BLAST of CmaCh06G009360 vs. TAIR10
Match: AT2G44840.1 (AT2G44840.1 ethylene-responsive element binding factor 13)

HSP 1 Score: 121.7 bits (304), Expect = 4.3e-28
Identity = 61/95 (64.21%), Postives = 73/95 (76.84%), Query Frame = 1


Query: 63  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLN 122
           +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY+T E+AA+AYDRAAFQ+RG+KAKLN
Sbjct: 88  KGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLN 147

Query: 123 FPHMIGSAEALIGIGCCY-PKRASP--NSPPPLFS 155
           FPH+IGS        C Y P R  P   SP P  S
Sbjct: 148 FPHLIGS--------CKYEPVRIRPRRRSPEPSVS 174

[Close]

BLAST of CmaCh06G009360 vs. TAIR10
Match: AT4G17500.1 (AT4G17500.1 ethylene responsive element binding factor 1)

HSP 1 Score: 107.8 bits (268), Expect = 6.5e-24
Identity = 47/72 (65.28%), Postives = 62/72 (86.11%), Query Frame = 1


Query: 60  SSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKA 119
           ++ +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGT++TAE+AALAYDRAAF+MRG++A
Sbjct: 141 TAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRA 200

Query: 120 KLNFPHMIGSAE 132
            LNFP  + S E
Sbjct: 201 LLNFPLRVNSGE 212

[Close]

BLAST of CmaCh06G009360 vs. TAIR10
Match: AT5G61600.1 (AT5G61600.1 ethylene response factor 104)

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-23
Identity = 55/90 (61.11%), Postives = 64/90 (71.11%), Query Frame = 1


Query: 67  FRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHM 126
           +RGVRRRPWGKYAAEIRDPN+KG RIWLGTY TA EA  AYD+AAFQ+RG KA LNFP  
Sbjct: 88  YRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

Query: 127 IG------SAEALIGIGCCYPKRASPNSPP 151
           +       S E +IG+G    ++    SPP
Sbjct: 148 VRVTSETCSGEGVIGLG---KRKRDKGSPP 174

[Close]

BLAST of CmaCh06G009360 vs. TAIR10
Match: AT5G47220.1 (AT5G47220.1 ethylene responsive element binding factor 2)

HSP 1 Score: 104.0 bits (258), Expect = 9.3e-23
Identity = 46/76 (60.53%), Postives = 62/76 (81.58%), Query Frame = 1


Query: 56  PGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMR 115
           P   ++++   +RGVR+RPWGK+AAEIRDP + GAR+WLGT++TAE+AALAYD AAF+MR
Sbjct: 106 PVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMR 165

Query: 116 GAKAKLNFPHMIGSAE 132
           G++A LNFP  + S E
Sbjct: 166 GSRALLNFPLRVNSGE 181

[Close]

BLAST of CmaCh06G009360 vs. TAIR10
Match: AT5G51190.1 (AT5G51190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-22
Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 1


Query: 67  FRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHM 126
           +RGVRRRPWGKYAAEIRDPN+KG R+WLGT+ TA EAA  YD+AAF++RG+KA LNFP  
Sbjct: 72  YRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLE 131

Query: 127 IGSAEAL 134
            G  E L
Sbjct: 132 AGKHEDL 138

[Close]

BLAST of CmaCh06G009360 vs. NCBI nr
Match: gi|659077725|ref|XP_008439350.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo])

HSP 1 Score: 152.9 bits (385), Expect = 5.0e-34
Identity = 87/151 (57.62%), Postives = 102/151 (67.55%), Query Frame = 1


Query: 2   SSNSNCSQGSSSSEVFLLEWIRRHLLEDELD-----------------SVGGLGKNTPSL 61
           SS+S+ S   SSS++FLLE IRRHLLED+L                  S  G G    + 
Sbjct: 4   SSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNN 63

Query: 62  KSGDGVTDIEA------PGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQ 121
            + + V  + +      P + S  RGLQFRGVRRRPWGKYAAEIRDP+RKGARIWLGTY 
Sbjct: 64  NNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYH 123

Query: 122 TAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 130
           TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 124 TAQDAALAYDRAAFQMRGAKAKLNFPHIISS 154

[Close]

BLAST of CmaCh06G009360 vs. NCBI nr
Match: gi|449432982|ref|XP_004134277.1| (PREDICTED: ethylene-responsive transcription factor 1 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 3.9e-31
Identity = 85/153 (55.56%), Postives = 99/153 (64.71%), Query Frame = 1


Query: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELD-----------------SVGGLG----- 60
           M S+S+ S   SSS++F LE IRRHLLED+L                  S  G G     
Sbjct: 1   MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSN 60

Query: 61  KNTPSLKSGDGVTDIEAPGKGSSIR--GLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGT 120
            N   +     +   + P + S  R  GLQFRGVRRRPWGKYAAEIRDP++KGARIWLGT
Sbjct: 61  NNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGT 120

Query: 121 YQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 130
           Y TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 121 YHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 153

[Close]

BLAST of CmaCh06G009360 vs. NCBI nr
Match: gi|703072573|ref|XP_010089319.1| (Ethylene-responsive transcription factor 13 [Morus notabilis])

HSP 1 Score: 142.1 bits (357), Expect = 8.8e-31
Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 1


Query: 12  SSSEVFLLEWIRRHLLEDE-LDSVGGLGKNTPSLKSGDGVTDIEAPGKGSSIR-----GL 71
           +S+++ LLE +R+HLL+D+ ++       N   ++    +T IE   +G+  R     G+
Sbjct: 8   NSADMALLESVRQHLLDDDCVNPPATFFANVAPVREATRMTGIEQYQEGARERHAPSGGV 67

Query: 72  QFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPH 131
            FRGVRRRPWGKYAAEIRDP + GAR+WLGTY+T E+AALAYDRAAF+MRG+KAKLNFPH
Sbjct: 68  HFRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETQEDAALAYDRAAFKMRGSKAKLNFPH 127

Query: 132 MIGSAEALIGIGCCYPKRASPNS 149
           +IGS+  L  +    PKR SP +
Sbjct: 128 LIGSSHEL-ELARVTPKRRSPET 149

[Close]

BLAST of CmaCh06G009360 vs. NCBI nr
Match: gi|923922491|ref|XP_013730431.1| (PREDICTED: ethylene-responsive transcription factor 1-like [Brassica napus])

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-29
Identity = 70/112 (62.50%), Postives = 85/112 (75.89%), Query Frame = 1


Query: 18  LLEWIRRHLLEDELDSVGGLGKNT-PSLKSGDGVTDIEAPGKGSSIRGLQFRGVRRRPWG 77
           +L+ IRRHLLED+ +S+     ++ P L+S             +S RG  F+GVRRRPWG
Sbjct: 13  VLDSIRRHLLEDDSESLSSFSSSSSPDLES-------------TSRRGGNFKGVRRRPWG 72

Query: 78  KYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIG 129
           KYAAEIRDPN+ GARIWLGTY+TAEEAA AYDRAAF++RGAKAKLNFPH+IG
Sbjct: 73  KYAAEIRDPNKHGARIWLGTYETAEEAAAAYDRAAFKLRGAKAKLNFPHLIG 111

[Close]

BLAST of CmaCh06G009360 vs. NCBI nr
Match: gi|685370170|ref|XP_009118887.1| (PREDICTED: ethylene-responsive transcription factor 1-like [Brassica rapa])

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-29
Identity = 70/112 (62.50%), Postives = 85/112 (75.89%), Query Frame = 1


Query: 18  LLEWIRRHLLEDELDSVGGLGKNT-PSLKSGDGVTDIEAPGKGSSIRGLQFRGVRRRPWG 77
           +L+ IRRHLLED+ +S+     ++ P L+S             +S RG  F+GVRRRPWG
Sbjct: 13  VLDSIRRHLLEDDSESLSSFSSSSSPDLES-------------TSRRGGNFKGVRRRPWG 72

Query: 78  KYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIG 129
           KYAAEIRDPN+ GARIWLGTY+TAEEAA AYDRAAF++RGAKAKLNFPH+IG
Sbjct: 73  KYAAEIRDPNKHGARIWLGTYETAEEAAAAYDRAAFKLRGAKAKLNFPHLIG 111

The following BLAST results are available for this feature:

BLAST of CmaCh06G009360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF99_ARATH	7.7e-27	64.21	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=...	[more]
ERF2_TOBAC	3.6e-24	72.46	Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=...	[more]
ERF2_NICSY	3.6e-24	72.46	Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 ...	[more]
ERF1_TOBAC	3.6e-24	72.46	Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=...	[more]
PTI5_SOLLC	2.3e-23	73.24	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]

BLAST of CmaCh06G009360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L893_CUCSA	2.7e-31	55.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116730 PE=4 SV=1	[more]
W9QSR5_9ROSA	6.1e-31	52.45	Ethylene-responsive transcription factor 13 OS=Morus notabilis GN=L484_021851 PE...	[more]
M4EV32_BRARP	1.2e-29	62.50	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
K7L178_SOYBN	4.4e-29	48.34	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A0A0R0J8G6_SOYBN	4.4e-29	48.65	Uncharacterized protein OS=Glycine max GN=GLYMA_07G113800 PE=4 SV=1	[more]

BLAST of CmaCh06G009360 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44840.1	4.3e-28	64.21	ethylene-responsive element binding factor 13	[more]
AT4G17500.1	6.5e-24	65.28	ethylene responsive element binding factor 1	[more]
AT5G61600.1	1.9e-23	61.11	ethylene response factor 104	[more]
AT5G47220.1	9.3e-23	60.53	ethylene responsive element binding factor 2	[more]
AT5G51190.1	2.1e-22	70.15	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CmaCh06G009360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077725\|ref\|XP_008439350.1\|	5.0e-34	57.62	PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo]	[more]
gi\|449432982\|ref\|XP_004134277.1\|	3.9e-31	55.56	PREDICTED: ethylene-responsive transcription factor 1 [Cucumis sativus]	[more]
gi\|703072573\|ref\|XP_010089319.1\|	8.8e-31	52.45	Ethylene-responsive transcription factor 13 [Morus notabilis]	[more]
gi\|923922491\|ref\|XP_013730431.1\|	1.7e-29	62.50	PREDICTED: ethylene-responsive transcription factor 1-like [Brassica napus]	[more]
gi\|685370170\|ref\|XP_009118887.1\|	1.7e-29	62.50	PREDICTED: ethylene-responsive transcription factor 1-like [Brassica rapa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G009360.1	CmaCh06G009360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 67..78 score: 1.7E-10coord: 90..106 score: 1.7
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 66..125 score: 8.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 67..116 score: 1.4
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 66..130 score: 5.7
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 66..124 score: 23
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 67..125 score: 1.05
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 63..132 score: 9.7
None	No IPR available	PANTHER	PTHR31190:SF21	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13	coord: 63..132 score: 9.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G009360	Cucsa.260030	Cucumber (Gy14) v1	cgycmaB0728
CmaCh06G009360	Cla021069	Watermelon (97103) v1	cmawmB799
CmaCh06G009360	Csa3G116720	Cucumber (Chinese Long) v2	cmacuB818
CmaCh06G009360	MELO3C005940	Melon (DHL92) v3.5.1	cmameB766
CmaCh06G009360	ClCG05G000100	Watermelon (Charleston Gray)	cmawcgB738
CmaCh06G009360	CSPI03G07060	Wild cucumber (PI 183967)	cmacpiB830
CmaCh06G009360	CmoCh06G009640	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G009360	Lsi05G022300	Bottle gourd (USVL1VR-Ls)	cmalsiB766
CmaCh06G009360	MELO3C005940.2	Melon (DHL92) v3.6.1	cmamedB863
CmaCh06G009360	CsaV3_3G007180	Cucumber (Chinese Long) v3	cmacucB0965
CmaCh06G009360	Cla97C05G080020	Watermelon (97103) v2	cmawmbB857
CmaCh06G009360	Bhi01G000454	Wax gourd	cmawgoB1017
CmaCh06G009360	CsGy3G007210	Cucumber (Gy14) v2	cgybcmaB430
CmaCh06G009360	Carg25064	Silver-seed gourd	carcmaB1405

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G009360	Cucurbita maxima (Rimu)	cmacmaB027
CmaCh06G009360	Cucurbita pepo (Zucchini)	cmacpeB855