Lsi05G021190 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G021190
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionNon-specific lipid-transfer protein
Locationchr05 : 28057903 .. 28058265 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGCCCTAGCCTTCGTCGCCGTGTTCACATGCTCCCTGATGGTCGTTCTGTCTCAGAATGAGGACGTAGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGTTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCATCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTAGCGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGACTTTGTCGATGATCGGACCTTATGATTCGAGTCGCATCCCTTTGATTCCAAAAGAATGTGGAATTCCCGTCCAAATCCCTCCCATCGACAATTCCACTGATTGCTCATCGTAA

mRNA sequence

ATGGGGGCCCTAGCCTTCGTCGCCGTGTTCACATGCTCCCTGATGGTCGTTCTGTCTCAGAATGAGGACGTAGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGTTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCATCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTAGCGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGACTTTGTCGATGATCGGACCTTATGATTCGAGTCGCATCCCTTTGATTCCAAAAGAATGTGGAATTCCCGTCCAAATCCCTCCCATCGACAATTCCACTGATTGCTCATCGTAA

Coding sequence (CDS)

ATGGGGGCCCTAGCCTTCGTCGCCGTGTTCACATGCTCCCTGATGGTCGTTCTGTCTCAGAATGAGGACGTAGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGTTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCATCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTAGCGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGACTTTGTCGATGATCGGACCTTATGATTCGAGTCGCATCCCTTTGATTCCAAAAGAATGTGGAATTCCCGTCCAAATCCCTCCCATCGACAATTCCACTGATTGCTCATCGTAA

Protein sequence

MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCSS
Homology
[Close]
BLAST of Lsi05G021190 vs. Swiss-Prot
Match: NLTP6_AMBAR (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-14
Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 1 

Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTL 85
           +C  V   L+PC GF+ G       + PS +CC+GV  L    KTK D+VA+C CIK+  
Sbjct: 29  TCDTVQNILAPCAGFLTG-------QEPSKACCTGVNNLNNSRKTKADRVAVCNCIKELT 88

Query: 86  SMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
             I  YD  R+PL+  +CG+    P +D + DCS
Sbjct: 89  KSIA-YDPKRMPLLSTKCGVKPDFPAVDKNLDCS 114

[Close]
BLAST of Lsi05G021190 vs. Swiss-Prot
Match: NLT12_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13
Identity = 37/97 (38.14%), Postives = 54/97 (55.67%), Query Frame = 1 

Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKT 84
           E+C  V + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+  
Sbjct: 39  ETCGTVVRALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGLQRVHACECIQTA 98

Query: 85  LSMIGPYDSSRIPLIPKECGI-PVQIPPIDNSTDCSS 121
           +      D   +  +PK CGI   ++PPID + DC +
Sbjct: 99  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 130

[Close]
BLAST of Lsi05G021190 vs. Swiss-Prot
Match: NLT11_PARJU (Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica GN=PMAI PE=1 SV=3)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 1 

Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKT 84
           E+C  + + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+  
Sbjct: 2   ETCGTMVRALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGPQRVHACECIQTA 61

Query: 85  LSMIGPYDSSRIPLIPKECGI-PVQIPPIDNSTDCSS 121
           +      D   +  +PK CGI   ++PPID + DC +
Sbjct: 62  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 93

[Close]
BLAST of Lsi05G021190 vs. Swiss-Prot
Match: NLT21_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 1 

Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKT 84
           E+C  V Q++ PCL F+KG +     + PS  CCSG KKL+ + KT + K   C+CI + 
Sbjct: 33  EACGKVVQDIMPCLHFVKGEE-----KEPSKECCSGTKKLSEEVKTTEQKREACKCIVRA 92

Query: 85  LSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
              I    +  +  +PK+C I   +PPI    DCS
Sbjct: 93  TKGISGIKNELVAEVPKKCDIKTTLPPITADFDCS 122

[Close]
BLAST of Lsi05G021190 vs. Swiss-Prot
Match: NLT13_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.6e-13
Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 1 

Query: 4   LAFVAVFTCSLMVVLSQNE-DVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 63
           +A V V+T S  V  +      E+C  V   L PCL F++G +     + PS  CCSG K
Sbjct: 16  VAAVLVWTSSASVAPAPAPGSEETCGTVVGALMPCLPFVQGKE-----KEPSKGCCSGAK 75

Query: 64  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGI-PVQIPPIDNSTDCSS 121
           +L G+ KT   +V  CECI+  +      D   +  +PK CGI   ++PPID + DC +
Sbjct: 76  RLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 129

[Close]
BLAST of Lsi05G021190 vs. TrEMBL
Match: A0A0A0L5X1_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-43
Identity = 91/117 (77.78%), Postives = 101/117 (86.32%), Query Frame = 1 

Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           +LAFVAVFTCSLMVVLSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK
Sbjct: 9   SLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVK 68

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           +LA D KTKKDKVALCEC+KK+LS+IG YD SRIPLIPK+CG+ VQIPPI NSTDCS
Sbjct: 69  QLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]
BLAST of Lsi05G021190 vs. TrEMBL
Match: A0A061DSH8_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao GN=TCM_005159 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.3e-21
Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 1 

Query: 4   LAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           LA + +   S +     +    SC  V + ++PCL F+KG     GG +PS +CC G + 
Sbjct: 8   LAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGK----GGADPSQACCDGARD 67

Query: 64  LAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           LA +A+TK D+ A+CEC+K  L  +G YD+SR+PLI K+C + + IPPI++ TDCS
Sbjct: 68  LAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCS 119

[Close]
BLAST of Lsi05G021190 vs. TrEMBL
Match: I1JRZ7_SOYBN (Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_03G257200 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-20
Identity = 43/95 (45.26%), Postives = 69/95 (72.63%), Query Frame = 1 

Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTL 85
           SC  V +E++PC  F++G     G + PS +CC+G+KKL+G+A T +++ A+C+C+K+ L
Sbjct: 24  SCATVIEEVAPCTSFLQG-----GSKQPSVACCNGIKKLSGEAGTHQNRTAICQCLKEGL 83

Query: 86  SMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCSS 121
           + IG YD  R+P +PK+CG+   +PPID +TDCS+
Sbjct: 84  ATIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCSN 113

[Close]
BLAST of Lsi05G021190 vs. TrEMBL
Match: A0A0B2RU93_GLYSO (Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.6e-20
Identity = 43/94 (45.74%), Postives = 68/94 (72.34%), Query Frame = 1 

Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTL 85
           SC  V +E++PC  F++G     G + PS +CC+G+KKL+G+A T +++ A+C+C+K+ L
Sbjct: 24  SCATVIEEVAPCTSFLQG-----GSKQPSVACCNGIKKLSGEAGTHQNRTAICQCLKEGL 83

Query: 86  SMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           + IG YD  R+P +PK+CG+   +PPID +TDCS
Sbjct: 84  ASIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCS 112

[Close]
BLAST of Lsi05G021190 vs. TrEMBL
Match: M5XSP9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023612mg PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19
Identity = 45/110 (40.91%), Postives = 71/110 (64.55%), Query Frame = 1 

Query: 10  FTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAK 69
           F   L+ + S      SC  V Q+++PCL F+KG         PS  CC GVK+L+ +A 
Sbjct: 7   FLAVLLFLSSSANSAPSCPTVTQQVAPCLSFVKGGSDT----KPSEECCKGVKELSVNAN 66

Query: 70  TKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           ++ D+ A+C+C+K+ LS +G Y+ S++ L+PK+CG+ + +PPID +TDCS
Sbjct: 67  SRPDREAVCKCLKQVLSSVGNYNPSQVSLLPKKCGLSLNLPPIDKNTDCS 112

[Close]
BLAST of Lsi05G021190 vs. TAIR10
Match: AT5G59310.1 (AT5G59310.1 lipid transfer protein 4)

HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12
Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 1 

Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           AL F   F  ++ +V S +  + +C  VA  LSPCLG++       GG  P P CC+GVK
Sbjct: 4   ALRFFTCFVLTVFIVASVDAAI-TCGTVASSLSPCLGYLSK-----GGVVPPP-CCAGVK 63

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCSS 121
           KL G A+T  D+   C C++     + P  +S    +P +CG+ +   PI  ST+C++
Sbjct: 64  KLNGMAQTTPDRQQACRCLQSAAKGVNPSLASG---LPGKCGVSIPY-PISTSTNCAT 110

[Close]
BLAST of Lsi05G021190 vs. TAIR10
Match: AT2G15050.1 (AT2G15050.1 lipid transfer protein)

HSP 1 Score: 57.8 bits (138), Expect = 5.4e-09
Identity = 36/108 (33.33%), Postives = 50/108 (46.30%), Query Frame = 1 

Query: 1   MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 60
           +G L FV V     +   +      SC  V   L PC G++       G  +P P CC+G
Sbjct: 7   LGCLVFVFVIAAGPITAKA----ALSCGEVNSNLKPCTGYLTNG----GITSPGPQCCNG 66

Query: 61  VKKLAGDAKTKKDKVALCECIKKTLSMIGP-YDSSRIPLIPKECGIPV 108
           V+KL G   T  D+   C CIK     +GP  ++ R   IP+ CGI +
Sbjct: 67  VRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKI 106

[Close]
BLAST of Lsi05G021190 vs. TAIR10
Match: AT2G38540.1 (AT2G38540.1 lipid transfer protein 1)

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-08
Identity = 38/97 (39.18%), Postives = 50/97 (51.55%), Query Frame = 1 

Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTL 85
           SC  V   L+ C+G++       GG  P P+CCSGVK L   AKT  D+   C CI+   
Sbjct: 28  SCGSVNSNLAACIGYVLQ-----GGVIP-PACCSGVKNLNSIAKTTPDRQQACNCIQGAA 87

Query: 86  SMIGP-YDSSRIPLIPKECGIPVQIP-PIDNSTDCSS 121
             +G   ++ R   IPK CG  V IP  I  ST+C +
Sbjct: 88  RALGSGLNAGRAAGIPKACG--VNIPYKISTSTNCKT 116

[Close]
BLAST of Lsi05G021190 vs. TAIR10
Match: AT2G18370.1 (AT2G18370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 6.0e-08
Identity = 36/119 (30.25%), Postives = 54/119 (45.38%), Query Frame = 1 

Query: 4   LAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           LA ++V    +  +   +E   SC  V Q+L PC+ ++       G  NP  +CC GVK 
Sbjct: 7   LAIISVL--GIFFIPRYSESAISCSVVLQDLQPCVSYLTS-----GSGNPPETCCDGVKS 66

Query: 64  LAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECG--IPVQIPPIDNSTDCSS 121
           LA    T  DK A C+CIK   + +          +   CG  +PV   P   + DC++
Sbjct: 67  LAAATTTSADKKAACQCIKSVANSV-TVKPELAQALASNCGASLPVDASP---TVDCTT 114

[Close]
BLAST of Lsi05G021190 vs. TAIR10
Match: AT5G01870.1 (AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 3.9e-07
Identity = 35/104 (33.65%), Postives = 54/104 (51.92%), Query Frame = 1 

Query: 21  NEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCEC 80
           +E   SC  V   L PC+ ++       GG  P  SCC+G++ L+  A +  DK  +C C
Sbjct: 20  SEAAISCNAVQANLYPCVVYV-----VQGGAIPY-SCCNGIRMLSKQATSASDKQGVCRC 79

Query: 81  IKKTLSMIGPYDS---SRIPLIPKECGIPVQIP-PIDNSTDCSS 121
           IK  +  +  Y S    +   +P +CG  V++P  ID ST+C+S
Sbjct: 80  IKSVVGRVS-YSSIYLKKAAALPGKCG--VKLPYKIDPSTNCNS 114

[Close]
BLAST of Lsi05G021190 vs. NCBI nr
Match: gi|659074983|ref|XP_008437901.1| (PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo])

HSP 1 Score: 186.0 bits (471), Expect = 3.8e-44
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = 1 

Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           +LAFVAV TCSLMVVLSQ EDVESCVPVAQ LSPCLGFIKGS        PS SCCSGVK
Sbjct: 9   SLAFVAVLTCSLMVVLSQTEDVESCVPVAQSLSPCLGFIKGSGK------PSASCCSGVK 68

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           +LAG+ KTKKDKVALCECIKK+L+MIGPYD +RIPLIPK+CGI VQIPPI+NST+CS
Sbjct: 69  QLAGNTKTKKDKVALCECIKKSLAMIGPYDPTRIPLIPKQCGISVQIPPINNSTNCS 119

[Close]
BLAST of Lsi05G021190 vs. NCBI nr
Match: gi|700201296|gb|KGN56429.1| (hypothetical protein Csa_3G119620 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-43
Identity = 91/117 (77.78%), Postives = 101/117 (86.32%), Query Frame = 1 

Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           +LAFVAVFTCSLMVVLSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK
Sbjct: 9   SLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVK 68

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           +LA D KTKKDKVALCEC+KK+LS+IG YD SRIPLIPK+CG+ VQIPPI NSTDCS
Sbjct: 69  QLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]
BLAST of Lsi05G021190 vs. NCBI nr
Match: gi|778676915|ref|XP_004134304.2| (PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-43
Identity = 91/117 (77.78%), Postives = 101/117 (86.32%), Query Frame = 1 

Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           +LAFVAVFTCSLMVVLSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK
Sbjct: 9   SLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVK 68

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           +LA D KTKKDKVALCEC+KK+LS+IG YD SRIPLIPK+CG+ VQIPPI NSTDCS
Sbjct: 69  QLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]
BLAST of Lsi05G021190 vs. NCBI nr
Match: gi|470141935|ref|XP_004306679.1| (PREDICTED: probable non-specific lipid-transfer protein 2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 112.5 bits (280), Expect = 5.3e-22
Identity = 50/107 (46.73%), Postives = 75/107 (70.09%), Query Frame = 1 

Query: 13  SLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKK 72
           ++++ +S      +C  V ++L+PCL F+KGS      ++PSP+CCSG K+L+ + +T K
Sbjct: 9   AILLFVSAAHSAPTCPVVTKKLAPCLPFVKGSS-----KDPSPACCSGAKELSNNVQTSK 68

Query: 73  DKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           DK A+C C+KKTLS IG Y  S++ LIPK+CG+ + +PPID  TDCS
Sbjct: 69  DKQAVCMCLKKTLSTIGDYQPSKLSLIPKKCGLKLVLPPIDKKTDCS 110

[Close]
BLAST of Lsi05G021190 vs. NCBI nr
Match: gi|590721283|ref|XP_007051567.1| (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 108.6 bits (270), Expect = 7.6e-21
Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 1 

Query: 4   LAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           LA + +   S +     +    SC  V + ++PCL F+KG     GG +PS +CC G + 
Sbjct: 8   LAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGK----GGADPSQACCDGARD 67

Query: 64  LAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           LA +A+TK D+ A+CEC+K  L  +G YD+SR+PLI K+C + + IPPI++ TDCS
Sbjct: 68  LAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCS 119

The following BLAST results are available for this feature:
BLAST of Lsi05G021190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP6_AMBAR2.4e-1440.43Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1[more]
NLT12_PARJU1.5e-1338.14Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1[more]
NLT11_PARJU2.6e-1337.11Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica GN... [more]
NLT21_PARJU2.6e-1337.89Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1[more]
NLT13_PARJU7.6e-1336.13Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1[more]
BLAST of Lsi05G021190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5X1_CUCSA1.3e-4377.78Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1[more]
A0A061DSH8_THECC5.3e-2142.24Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
I1JRZ7_SOYBN2.0e-2045.26Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_03G257200 PE=3 SV=1[more]
A0A0B2RU93_GLYSO2.6e-2045.74Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1[more]
M5XSP9_PRUPE1.7e-1940.91Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023612mg PE=3 SV=1[more]
BLAST of Lsi05G021190 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59310.16.9e-1235.59 lipid transfer protein 4[more]
AT2G15050.15.4e-0933.33 lipid transfer protein[more]
AT2G38540.12.1e-0839.18 lipid transfer protein 1[more]
AT2G18370.16.0e-0830.25 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G01870.13.9e-0733.65 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Lsi05G021190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074983|ref|XP_008437901.1|3.8e-4479.49PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo][more]
gi|700201296|gb|KGN56429.1|1.9e-4377.78hypothetical protein Csa_3G119620 [Cucumis sativus][more]
gi|778676915|ref|XP_004134304.2|1.9e-4377.78PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus][more]
gi|470141935|ref|XP_004306679.1|5.3e-2246.73PREDICTED: probable non-specific lipid-transfer protein 2 [Fragaria vesca subsp.... [more]
gi|590721283|ref|XP_007051567.1|7.6e-2142.24Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
IPR000528Plant_LTP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005623 cell
cellular_component GO:0016020 membrane
molecular_function GO:0008289 lipid binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G021190.1Lsi05G021190.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant lipid transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 26..42
score: 8.7E-10coord: 73..88
score: 8.7E-10coord: 90..107
score: 8.7E-10coord: 109..120
score: 8.7
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 8..108
score: 3.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 27..118
score: 3.9
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 26..119
score: 1.09
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 26..119
score: 4.0
NoneNo IPR availablePANTHERPTHR33076FAMILY NOT NAMEDcoord: 1..119
score: 4.0
NoneNo IPR availablePANTHERPTHR33076:SF9SUBFAMILY NOT NAMEDcoord: 1..119
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G021190Csa3G119620Cucumber (Chinese Long) v2culsiB209
Lsi05G021190CSPI03G07980Wild cucumber (PI 183967)cpilsiB207
Lsi05G021190CmaCh14G021060Cucurbita maxima (Rimu)cmalsiB245
Lsi05G021190CmaCh06G010580Cucurbita maxima (Rimu)cmalsiB759
Lsi05G021190CmaCh00G002890Cucurbita maxima (Rimu)cmalsiB000
Lsi05G021190CmoCh06G010430Cucurbita moschata (Rifu)cmolsiB758
Lsi05G021190CmoCh14G021690Cucurbita moschata (Rifu)cmolsiB233
Lsi05G021190Cla021161Watermelon (97103) v1lsiwmB365
Lsi05G021190ClCG05G000860Watermelon (Charleston Gray)lsiwcgB335
Lsi05G021190Cla97C05G081020Watermelon (97103) v2lsiwmbB333
Lsi05G021190Bhi01G000346Wax gourdlsiwgoB433
Lsi05G021190Cp4.1LG03g16090Cucurbita pepo (Zucchini)cpelsiB506
Lsi05G021190CsGy3G008120Cucumber (Gy14) v2cgyblsiB196
Lsi05G021190Carg25695Silver-seed gourdcarlsiB110
Lsi05G021190Carg20891Silver-seed gourdcarlsiB907
Lsi05G021190CsaV3_3G008100Cucumber (Chinese Long) v3cuclsiB228
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G021190Cucumber (Chinese Long) v3cuclsiB318
Lsi05G021190Cucumber (Chinese Long) v3cuclsiB402
Lsi05G021190Watermelon (97103) v2lsiwmbB319
Lsi05G021190Watermelon (97103) v2lsiwmbB332
Lsi05G021190Wax gourdlsiwgoB419
Lsi05G021190Wax gourdlsiwgoB439
Lsi05G021190Bottle gourd (USVL1VR-Ls)lsilsiB014
Lsi05G021190Bottle gourd (USVL1VR-Ls)lsilsiB158
Lsi05G021190Cucumber (Gy14) v1cgylsiB139
Lsi05G021190Cucumber (Gy14) v1cgylsiB349
Lsi05G021190Cucumber (Gy14) v1cgylsiB415
Lsi05G021190Cucurbita maxima (Rimu)cmalsiB320
Lsi05G021190Cucurbita maxima (Rimu)cmalsiB321
Lsi05G021190Cucurbita maxima (Rimu)cmalsiB583
Lsi05G021190Cucurbita maxima (Rimu)cmalsiB838
Lsi05G021190Cucurbita moschata (Rifu)cmolsiB308
Lsi05G021190Cucurbita moschata (Rifu)cmolsiB310
Lsi05G021190Cucurbita moschata (Rifu)cmolsiB557
Lsi05G021190Cucurbita moschata (Rifu)cmolsiB822
Lsi05G021190Cucurbita pepo (Zucchini)cpelsiB626
Lsi05G021190Cucurbita pepo (Zucchini)cpelsiB714
Lsi05G021190Wild cucumber (PI 183967)cpilsiB298
Lsi05G021190Wild cucumber (PI 183967)cpilsiB382
Lsi05G021190Cucumber (Chinese Long) v2culsiB298
Lsi05G021190Cucumber (Chinese Long) v2culsiB378
Lsi05G021190Melon (DHL92) v3.5.1lsimeB336
Lsi05G021190Melon (DHL92) v3.5.1lsimeB375
Lsi05G021190Melon (DHL92) v3.5.1lsimeB378
Lsi05G021190Melon (DHL92) v3.5.1lsimeB387
Lsi05G021190Watermelon (Charleston Gray)lsiwcgB325
Lsi05G021190Watermelon (Charleston Gray)lsiwcgB334
Lsi05G021190Watermelon (97103) v1lsiwmB364
Lsi05G021190Watermelon (97103) v1lsiwmB375
Lsi05G021190Cucumber (Gy14) v2cgyblsiB274
Lsi05G021190Cucumber (Gy14) v2cgyblsiB345
Lsi05G021190Melon (DHL92) v3.6.1lsimedB353
Lsi05G021190Melon (DHL92) v3.6.1lsimedB396
Lsi05G021190Melon (DHL92) v3.6.1lsimedB408