CmoCh14G021690 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G021690
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Non-specific lipid-transfer protein
Location	Cmo_Chr14 : 15565487 .. 15566229 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGAATCTTCCATCTCCGCTCGACCATCGGGGCCCTGGCATTTGTTGCAATCTTCACATGCTCCCAGATGGTCACTCTGTCTCAGAGTGCCGACGTGGAAGCTTGCATACCGGTGGTGCAGGAGTTATCACCATGCTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGCGGCGAGAATCCATCACCATCGTGCTGCACCGGCGTTGGAAAGTTGGTCGACGATGCTAAAACGAAGAAAGATAGGGTAGATTTGTGTGAGTGCATCAAGACGAGTTTGTCGATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCGGAAGATTGTGGAATTCCCGCCCAAATTCCCCCCATCGACAGTTCTACCGACTGCTCGAAGTAAATCACAATTCATCATTTGTTTTTGTATTGAATTTTCTTAACAAAACATTAGGTGTTTGTGAGCTAAGATTTTTGGTGTTCGTGTGTCGGCATGCAGGGCTGAGGACTATCAATTTGGAAGTGCTTTTTCATACGAGCTTGAGGACAACCATAATCATTGAGCCCAATCAACATATACTCAGCAAATCCCATATGATATCTTTGAGGTTCTTCATGTTTCATAATAAGTCCCAATAATCCTAAATTTACATACTCATAGTACTCTTTGTATCTGTTATCAATAATACTTCTACCTATATTATACTCATCAATCCACCCTTTTCCGTTTTGAATGTACTTTTCATTCTCGAG

mRNA sequence

ATGTCAGGAATCTTCCATCTCCGCTCGACCATCGGGGCCCTGGCATTTGTTGCAATCTTCACATGCTCCCAGATGGTCACTCTGTCTCAGAGTGCCGACGTGGAAGCTTGCATACCGGTGGTGCAGGAGTTATCACCATGCTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGCGGCGAGAATCCATCACCATCGTGCTGCACCGGCGTTGGAAAGTTGGTCGACGATGCTAAAACGAAGAAAGATAGGGTAGATTTGTGTGAGTGCATCAAGACGAGTTTGTCGATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCGGAAGATTGTGGAATTCCCGCCCAAATTCCCCCCATCGACAGTTCTACCGACTGCTCGAAGGCTGAGGACTATCAATTTGGAAGTGCTTTTTCATACGAGCTTGAGGACAACCATAATCATTGAGCCCAATCAACATATACTCAGCAAATCCCATATGATATCTTTGAGGTTCTTCATGTTTCATAATAAGTCCCAATAATCCTAAATTTACATACTCATAGTACTCTTTGTATCTGTTATCAATAATACTTCTACCTATATTATACTCATCAATCCACCCTTTTCCGTTTTGAATGTACTTTTCATTCTCGAG

Coding sequence (CDS)

ATGTCAGGAATCTTCCATCTCCGCTCGACCATCGGGGCCCTGGCATTTGTTGCAATCTTCACATGCTCCCAGATGGTCACTCTGTCTCAGAGTGCCGACGTGGAAGCTTGCATACCGGTGGTGCAGGAGTTATCACCATGCTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGCGGCGAGAATCCATCACCATCGTGCTGCACCGGCGTTGGAAAGTTGGTCGACGATGCTAAAACGAAGAAAGATAGGGTAGATTTGTGTGAGTGCATCAAGACGAGTTTGTCGATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCGGAAGATTGTGGAATTCCCGCCCAAATTCCCCCCATCGACAGTTCTACCGACTGCTCGAAGGCTGAGGACTATCAATTTGGAAGTGCTTTTTCATACGAGCTTGAGGACAACCATAATCATTGA

Homology

[Close]

BLAST of CmoCh14G021690 vs. Swiss-Prot
Match: NLTP6_AMBAR (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-15
Identity = 41/94 (43.62%), Postives = 52/94 (55.32%), Query Frame = 1


Query: 37  CIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLS 96
           C  V   L+PC GF+ G       + PS +CCTGV  L +  KTK DRV +C CIK    
Sbjct: 30  CDTVQNILAPCAGFLTG-------QEPSKACCTGVNNLNNSRKTKADRVAVCNCIKELTK 89

Query: 97  MIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCSK 131
            I  YDP R+PL+   CG+    P +D + DCSK
Sbjct: 90  SIA-YDPKRMPLLSTKCGVKPDFPAVDKNLDCSK 115

[Close]

BLAST of CmoCh14G021690 vs. Swiss-Prot
Match: NLT21_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.6e-13
Identity = 36/102 (35.29%), Postives = 55/102 (53.92%), Query Frame = 1


Query: 35  EACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTS 94
           EAC  VVQ++ PCL F+KG +     + PS  CC+G  KL ++ KT + + + C+CI  +
Sbjct: 33  EACGKVVQDIMPCLHFVKGEE-----KEPSKECCSGTKKLSEEVKTTEQKREACKCIVRA 92

Query: 95  LSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCSKAEDYQF 137
              I       +  +P+ C I   +PPI +  DCSK +   F
Sbjct: 93  TKGISGIKNELVAEVPKKCDIKTTLPPITADFDCSKIQSTIF 129

[Close]

BLAST of CmoCh14G021690 vs. Swiss-Prot
Match: NLT13_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-12
Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = 1


Query: 8   RSTIGALAFVA---IFTCSQMVTLSQS-ADVEACIPVVQELSPCLGFIKGSDSAFGGENP 67
           RS++  +  VA   ++T S  V  + +    E C  VV  L PCL F++G +     + P
Sbjct: 7   RSSVALVVIVAAVLVWTSSASVAPAPAPGSEETCGTVVGALMPCLPFVQGKE-----KEP 66

Query: 68  SPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGI-PAQIPPI 127
           S  CC+G  +L  + KT   RV  CECI+T++      D   +  +P+ CGI  +++PPI
Sbjct: 67  SKGCCSGAKRLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGIVDSKLPPI 126

Query: 128 DSSTDC 129
           D + DC
Sbjct: 127 DVNMDC 127

[Close]

BLAST of CmoCh14G021690 vs. Swiss-Prot
Match: NLT12_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-12
Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 1


Query: 35  EACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTS 94
           E C  VV+ L PCL F++G +     + PS  CC+G  +L  + KT   RV  CECI+T+
Sbjct: 39  ETCGTVVRALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGLQRVHACECIQTA 98

Query: 95  LSMIGPYDPSRIPLIPEDCGI-PAQIPPIDSSTDC 129
           +      D   +  +P+ CGI  +++PPID + DC
Sbjct: 99  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDC 128

[Close]

BLAST of CmoCh14G021690 vs. Swiss-Prot
Match: NLT22_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-12
Identity = 42/132 (31.82%), Postives = 63/132 (47.73%), Query Frame = 1


Query: 10  TIGALAFVAIFTCSQMVTLSQSADVEA-----CIPVVQELSPCLGFIKGSDSAFGGENPS 69
           T+   A V I       + ++ A   A     C  VV  + PCL F+KG +     + PS
Sbjct: 3   TVSMAALVVIAAALAWTSSAELASAPAPGEGPCGKVVHHIMPCLKFVKGEE-----KEPS 62

Query: 70  PSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDS 129
            SCC+G  KL ++ KT + + + C+CI  +   I       +  +P+ CGI   +PPI +
Sbjct: 63  KSCCSGTKKLSEEVKTTEQKREACKCIVAATKGISGIKNELVAEVPKKCGITTTLPPITA 122

Query: 130 STDCSKAEDYQF 137
             DCSK E   F
Sbjct: 123 DFDCSKIESTIF 129

[Close]

BLAST of CmoCh14G021690 vs. TrEMBL
Match: A0A0A0L5X1_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-39
Identity = 84/130 (64.62%), Postives = 101/130 (77.69%), Query Frame = 1


Query: 1   MSGIFHLRSTIGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGG 60
           MSGIF++RS    LAFVA+FTCS MV LSQ+ D+E+C+PV Q L+PCLGFIKG+      
Sbjct: 1   MSGIFNIRS----LAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK---- 60

Query: 61  ENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP 120
             PS SCC+GV +L  D KTKKD+V LCEC+K SLS+IG YDPSRIPLIP+ CG+  QIP
Sbjct: 61  --PSASCCSGVKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIP 120

Query: 121 PIDSSTDCSK 131
           PI +STDCSK
Sbjct: 121 PIKNSTDCSK 120

[Close]

BLAST of CmoCh14G021690 vs. TrEMBL
Match: A0A061DSH8_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao GN=TCM_005159 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-21
Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 1


Query: 10  TIGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCT 69
           +I  LA + +   S + T   S    +C  V + ++PCL F+KG     GG +PS +CC 
Sbjct: 4   SINFLAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGK----GGADPSQACCD 63

Query: 70  GVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCS 129
           G   L  +A+TK DR  +CEC+KT+L  +G YD SR+PLI + C +   IPPI+  TDCS
Sbjct: 64  GARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCS 121

Query: 130 KA 132
           KA
Sbjct: 124 KA 121

[Close]

BLAST of CmoCh14G021690 vs. TrEMBL
Match: A0A0D2P6M3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G043800 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.1e-21
Identity = 53/120 (44.17%), Postives = 75/120 (62.50%), Query Frame = 1


Query: 11  IGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTG 70
           I  +A +     S+ +T + +A    C  V+  LSPC GFIKG      G NP+P CC G
Sbjct: 5   INFIAMLVFLNFSRDITETTAAS-PLCDVVIFYLSPCEGFIKG------GANPAPECCVG 64

Query: 71  VGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCSK 130
             +L+D+ KTK+DR+++C CIK  L  +GP+DP+R+PL+ + CGI    PPI  +TDCSK
Sbjct: 65  AKRLIDELKTKEDRIEVCLCIKALLPQLGPFDPNRVPLLGQKCGIKNFFPPITPATDCSK 117

[Close]

BLAST of CmoCh14G021690 vs. TrEMBL
Match: A0A0B2RU93_GLYSO (Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-20
Identity = 45/106 (42.45%), Postives = 71/106 (66.98%), Query Frame = 1


Query: 25  MVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTGVGKLVDDAKTKKDR 84
           ++T S +    +C  V++E++PC  F++G     G + PS +CC G+ KL  +A T ++R
Sbjct: 13  LITRSGALASISCATVIEEVAPCTSFLQG-----GSKQPSVACCNGIKKLSGEAGTHQNR 72

Query: 85  VDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCSK 131
             +C+C+K  L+ IG YDP R+P +P+DCG+ A +PPID +TDCSK
Sbjct: 73  TAICQCLKEGLASIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCSK 113

[Close]

BLAST of CmoCh14G021690 vs. TrEMBL
Match: I1JRZ7_SOYBN (Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_03G257200 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.6e-20
Identity = 44/105 (41.90%), Postives = 70/105 (66.67%), Query Frame = 1


Query: 25  MVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTGVGKLVDDAKTKKDR 84
           ++T S +    +C  V++E++PC  F++G     G + PS +CC G+ KL  +A T ++R
Sbjct: 13  LITRSGALASISCATVIEEVAPCTSFLQG-----GSKQPSVACCNGIKKLSGEAGTHQNR 72

Query: 85  VDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCS 130
             +C+C+K  L+ IG YDP R+P +P+DCG+ A +PPID +TDCS
Sbjct: 73  TAICQCLKEGLATIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCS 112

[Close]

BLAST of CmoCh14G021690 vs. TAIR10
Match: AT5G59310.1 (AT5G59310.1 lipid transfer protein 4)

HSP 1 Score: 58.9 bits (141), Expect = 3.1e-09
Identity = 42/118 (35.59%), Postives = 59/118 (50.00%), Query Frame = 1


Query: 13  ALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTGVG 72
           AL F   F  +  +  S  A +  C  V   LSPCLG++       GG  P P CC GV 
Sbjct: 4   ALRFFTCFVLTVFIVASVDAAI-TCGTVASSLSPCLGYLSK-----GGVVPPP-CCAGVK 63

Query: 73  KLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP-PIDSSTDCS 130
           KL   A+T  DR   C C++++   +   +PS    +P  CG+   IP PI +ST+C+
Sbjct: 64  KLNGMAQTTPDRQQACRCLQSAAKGV---NPSLASGLPGKCGV--SIPYPISTSTNCA 109

[Close]

BLAST of CmoCh14G021690 vs. TAIR10
Match: AT5G59320.1 (AT5G59320.1 lipid transfer protein 3)

HSP 1 Score: 58.5 bits (140), Expect = 4.0e-09
Identity = 43/120 (35.83%), Postives = 59/120 (49.17%), Query Frame = 1


Query: 14  LAFVAIFTCSQMVTLSQSADVEA---CIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTG 73
           +AF   F    ++T+   A V+A   C  V   L+PC  ++       GG  P PSCC G
Sbjct: 1   MAFALRFFTCLVLTVCIVASVDAAISCGTVAGSLAPCATYLSK-----GGLVP-PSCCAG 60

Query: 74  VGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP-PIDSSTDCS 130
           V  L   AKT  DR   C CI+++   I   +PS    +P  CG+   IP PI  ST+C+
Sbjct: 61  VKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGV--SIPYPISMSTNCN 112

[Close]

BLAST of CmoCh14G021690 vs. TAIR10
Match: AT3G51590.1 (AT3G51590.1 lipid transfer protein 12)

HSP 1 Score: 55.5 bits (132), Expect = 3.4e-08
Identity = 38/115 (33.04%), Postives = 56/115 (48.70%), Query Frame = 1


Query: 19  IFTCSQMVTLSQSADVEA---CIPVVQELSPCLGFIKGSDSAFGGENPSPS-CCTGVGKL 78
           I TC  ++T+  ++  E+   C  V   L+ CL ++  S        P PS CC GV  L
Sbjct: 7   IITCLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNS-------GPLPSQCCVGVKSL 66

Query: 79  VDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP-PIDSSTDC 129
              A+T  DR  +CEC+K +   I   +   +  +P  CG+   IP PI  ST+C
Sbjct: 67  YQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGV--SIPYPISFSTNC 112

[Close]

BLAST of CmoCh14G021690 vs. TAIR10
Match: AT2G15325.1 (AT2G15325.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 8.3e-07
Identity = 34/123 (27.64%), Postives = 55/123 (44.72%), Query Frame = 1


Query: 7   LRSTIGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPS 66
           +R +I     +AI      + +     +  C      L+PCL ++     A     PSP 
Sbjct: 1   MRKSISIAFVIAITIFMSHLNVFTVYSLTPCEEATNLLTPCLRYLWAPPEA----KPSPE 60

Query: 67  CCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSST 126
           CC+G+ K+    KT  DR D+C C+ +S + I   D  +   +P+ C + A   P+    
Sbjct: 61  CCSGLDKVNKGVKTYDDRHDMCICL-SSEAAITSADQYKFDNLPKLCNV-ALFAPVGPKF 117

Query: 127 DCS 130
           DCS
Sbjct: 121 DCS 117

[Close]

BLAST of CmoCh14G021690 vs. TAIR10
Match: AT2G38540.1 (AT2G38540.1 lipid transfer protein 1)

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-06
Identity = 34/95 (35.79%), Postives = 49/95 (51.58%), Query Frame = 1


Query: 36  ACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSL 95
           +C  V   L+ C+G++       GG  P P+CC+GV  L   AKT  DR   C CI+ + 
Sbjct: 28  SCGSVNSNLAACIGYVLQ-----GGVIP-PACCSGVKNLNSIAKTTPDRQQACNCIQGAA 87

Query: 96  SMIGP-YDPSRIPLIPEDCGIPAQIP-PIDSSTDC 129
             +G   +  R   IP+ CG+   IP  I +ST+C
Sbjct: 88  RALGSGLNAGRAAGIPKACGV--NIPYKISTSTNC 114

[Close]

BLAST of CmoCh14G021690 vs. NCBI nr
Match: gi|778676915|ref|XP_004134304.2| (PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-44
Identity = 94/150 (62.67%), Postives = 112/150 (74.67%), Query Frame = 1


Query: 1   MSGIFHLRSTIGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGG 60
           MSGIF++RS    LAFVA+FTCS MV LSQ+ D+E+C+PV Q L+PCLGFIKG+      
Sbjct: 1   MSGIFNIRS----LAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK---- 60

Query: 61  ENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP 120
             PS SCC+GV +L  D KTKKD+V LCEC+K SLS+IG YDPSRIPLIP+ CG+  QIP
Sbjct: 61  --PSASCCSGVKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIP 120

Query: 121 PIDSSTDCSKAEDYQFGSAFSYELEDNHNH 151
           PI +STDCSK   YQFGSA  YE    H+H
Sbjct: 121 PIKNSTDCSKVTGYQFGSALIYEAGGIHHH 140

[Close]

BLAST of CmoCh14G021690 vs. NCBI nr
Match: gi|659074983|ref|XP_008437901.1| (PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-44
Identity = 94/150 (62.67%), Postives = 113/150 (75.33%), Query Frame = 1


Query: 1   MSGIFHLRSTIGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGG 60
           MSG+F+ RS    LAFVA+ TCS MV LSQ+ DVE+C+PV Q LSPCLGFIKGS      
Sbjct: 1   MSGVFNFRS----LAFVAVLTCSLMVVLSQTEDVESCVPVAQSLSPCLGFIKGSGK---- 60

Query: 61  ENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP 120
             PS SCC+GV +L  + KTKKD+V LCECIK SL+MIGPYDP+RIPLIP+ CGI  QIP
Sbjct: 61  --PSASCCSGVKQLAGNTKTKKDKVALCECIKKSLAMIGPYDPTRIPLIPKQCGISVQIP 120

Query: 121 PIDSSTDCSKAEDYQFGSAFSYELEDNHNH 151
           PI++ST+CSK + +QFGSA  YE    H+H
Sbjct: 121 PINNSTNCSKVKGFQFGSALIYEAGGIHHH 140

[Close]

BLAST of CmoCh14G021690 vs. NCBI nr
Match: gi|700201296|gb|KGN56429.1| (hypothetical protein Csa_3G119620 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 2.0e-39
Identity = 84/130 (64.62%), Postives = 101/130 (77.69%), Query Frame = 1


Query: 1   MSGIFHLRSTIGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGG 60
           MSGIF++RS    LAFVA+FTCS MV LSQ+ D+E+C+PV Q L+PCLGFIKG+      
Sbjct: 1   MSGIFNIRS----LAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK---- 60

Query: 61  ENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP 120
             PS SCC+GV +L  D KTKKD+V LCEC+K SLS+IG YDPSRIPLIP+ CG+  QIP
Sbjct: 61  --PSASCCSGVKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIP 120

Query: 121 PIDSSTDCSK 131
           PI +STDCSK
Sbjct: 121 PIKNSTDCSK 120

[Close]

BLAST of CmoCh14G021690 vs. NCBI nr
Match: gi|590721283|ref|XP_007051567.1| (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21
Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 1


Query: 10  TIGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCT 69
           +I  LA + +   S + T   S    +C  V + ++PCL F+KG     GG +PS +CC 
Sbjct: 4   SINFLAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGK----GGADPSQACCD 63

Query: 70  GVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCS 129
           G   L  +A+TK DR  +CEC+KT+L  +G YD SR+PLI + C +   IPPI+  TDCS
Sbjct: 64  GARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCS 121

Query: 130 KA 132
           KA
Sbjct: 124 KA 121

[Close]

BLAST of CmoCh14G021690 vs. NCBI nr
Match: gi|823155845|ref|XP_012477871.1| (PREDICTED: non-specific lipid-transfer protein-like [Gossypium raimondii])

HSP 1 Score: 109.0 bits (271), Expect = 7.3e-21
Identity = 53/120 (44.17%), Postives = 75/120 (62.50%), Query Frame = 1


Query: 11  IGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTG 70
           I  +A +     S+ +T + +A    C  V+  LSPC GFIKG      G NP+P CC G
Sbjct: 5   INFIAMLVFLNFSRDITETTAAS-PLCDVVIFYLSPCEGFIKG------GANPAPECCVG 64

Query: 71  VGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCSK 130
             +L+D+ KTK+DR+++C CIK  L  +GP+DP+R+PL+ + CGI    PPI  +TDCSK
Sbjct: 65  AKRLIDELKTKEDRIEVCLCIKALLPQLGPFDPNRVPLLGQKCGIKNFFPPITPATDCSK 117

The following BLAST results are available for this feature:

BLAST of CmoCh14G021690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLTP6_AMBAR	2.1e-15	43.62	Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1	[more]
NLT21_PARJU	5.6e-13	35.29	Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1	[more]
NLT13_PARJU	1.2e-12	34.13	Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1	[more]
NLT12_PARJU	1.2e-12	37.89	Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1	[more]
NLT22_PARJU	1.2e-12	31.82	Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1	[more]

BLAST of CmoCh14G021690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5X1_CUCSA	1.4e-39	64.62	Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1	[more]
A0A061DSH8_THECC	1.7e-21	42.62	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
A0A0D2P6M3_GOSRA	5.1e-21	44.17	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G043800 PE=3 SV=1	[more]
A0A0B2RU93_GLYSO	2.5e-20	42.45	Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1	[more]
I1JRZ7_SOYBN	9.6e-20	41.90	Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_03G257200 PE=3 SV=1	[more]

BLAST of CmoCh14G021690 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59310.1	3.1e-09	35.59	lipid transfer protein 4	[more]
AT5G59320.1	4.0e-09	35.83	lipid transfer protein 3	[more]
AT3G51590.1	3.4e-08	33.04	lipid transfer protein 12	[more]
AT2G15325.1	8.3e-07	27.64	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G38540.1	1.9e-06	35.79	lipid transfer protein 1	[more]

BLAST of CmoCh14G021690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676915\|ref\|XP_004134304.2\|	1.2e-44	62.67	PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus]	[more]
gi\|659074983\|ref\|XP_008437901.1\|	1.2e-44	62.67	PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo]	[more]
gi\|700201296\|gb\|KGN56429.1\|	2.0e-39	64.62	hypothetical protein Csa_3G119620 [Cucumis sativus]	[more]
gi\|590721283\|ref\|XP_007051567.1\|	2.5e-21	42.62	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
gi\|823155845\|ref\|XP_012477871.1\|	7.3e-21	44.17	PREDICTED: non-specific lipid-transfer protein-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000528	Plant_LTP
IPR016140	Bifunc_inhib/LTP/seed_store

Vocabulary: **Biological Process**
Term	Definition
GO:0006869	lipid transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005623	cell
cellular_component	GO:0016020	membrane
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G021690.1	CmoCh14G021690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 83..98 score: 6.3E-8coord: 36..52 score: 6.3E-8coord: 100..117 score: 6.3E-8coord: 119..130 score: 6.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 37..128 score: 2.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 37..130 score: 1.76
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 36..130 score: 2.3
None	No IPR available	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 1..136 score: 4.9
None	No IPR available	PANTHER	PTHR33076:SF9	SUBFAMILY NOT NAMED	coord: 1..136 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G021690	CmaCh14G021060	Cucurbita maxima (Rimu)	cmacmoB245
CmoCh14G021690	CmaCh06G010580	Cucurbita maxima (Rimu)	cmacmoB793
CmoCh14G021690	CmaCh00G002890	Cucurbita maxima (Rimu)	cmacmoB005
CmoCh14G021690	Cla021161	Watermelon (97103) v1	cmowmB231
CmoCh14G021690	Csa3G119620	Cucumber (Chinese Long) v2	cmocuB239
CmoCh14G021690	ClCG05G000860	Watermelon (Charleston Gray)	cmowcgB219
CmoCh14G021690	CSPI03G07980	Wild cucumber (PI 183967)	cmocpiB243
CmoCh14G021690	Lsi05G021190	Bottle gourd (USVL1VR-Ls)	cmolsiB233
CmoCh14G021690	Cp4.1LG03g16090	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G021690	CsaV3_3G008100	Cucumber (Chinese Long) v3	cmocucB0283
CmoCh14G021690	Cla97C05G081020	Watermelon (97103) v2	cmowmbB243
CmoCh14G021690	Bhi01G000346	Wax gourd	cmowgoB0303
CmoCh14G021690	CsGy3G008120	Cucumber (Gy14) v2	cgybcmoB290
CmoCh14G021690	Carg20891	Silver-seed gourd	carcmoB1330
CmoCh14G021690	Carg25695	Silver-seed gourd	carcmoB0170

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh14G021690	CmoCh06G010430	Cucurbita moschata (Rifu)	cmocmoB224

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G021690	Cucumber (Gy14) v1	cgycmoB0597
CmoCh14G021690	Cucumber (Gy14) v1	cgycmoB0700
CmoCh14G021690	Cucurbita maxima (Rimu)	cmacmoB799
CmoCh14G021690	Cucurbita maxima (Rimu)	cmacmoB882
CmoCh14G021690	Wild cucumber (PI 183967)	cmocpiB257
CmoCh14G021690	Cucumber (Chinese Long) v2	cmocuB251
CmoCh14G021690	Melon (DHL92) v3.5.1	cmomeB198
CmoCh14G021690	Melon (DHL92) v3.5.1	cmomeB230
CmoCh14G021690	Watermelon (97103) v1	cmowmB234
CmoCh14G021690	Cucurbita pepo (Zucchini)	cmocpeB254
CmoCh14G021690	Bottle gourd (USVL1VR-Ls)	cmolsiB214
CmoCh14G021690	Cucumber (Gy14) v2	cgybcmoB568
CmoCh14G021690	Melon (DHL92) v3.6.1	cmomedB219
CmoCh14G021690	Melon (DHL92) v3.6.1	cmomedB260
CmoCh14G021690	Cucumber (Chinese Long) v3	cmocucB0296
CmoCh14G021690	Watermelon (97103) v2	cmowmbB227
CmoCh14G021690	Watermelon (97103) v2	cmowmbB242
CmoCh14G021690	Wax gourd	cmowgoB0297
CmoCh14G021690	Cucurbita moschata (Rifu)	cmocmoB193
CmoCh14G021690	Cucurbita moschata (Rifu)	cmocmoB212