CSPI03G07980 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G07980
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionNon-specific lipid-transfer protein
LocationChr3 : 6842852 .. 6843268 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAGCTCAAAACATAAACACCCACCAAGTGTTTGTAAACTTTTCCAAGTAAGAAATGTCGGGAATCTTCAATATTCGGTCCCTAGCCTTCGTGGCCGTGTTTACATGCTCGCTGATGGTGGTTCTGTCTCAGAATGAGGATCTGGAAAGTTGTGTACCGGTGGCACAGGCGCTAGCACCATGTTTGGGGTTCATCAAAGGCAACGGCAAACCATCGGCGTCGTGCTGCAGTGGCGTTAAACAGTTGGCGCGAGATACTAAAACGAAGAAAGATAAAGTTGCACTGTGCGAATGCGTCAAGAAGAGTTTGTCAGTGATCGGAACTTATGATCCGAGTCGCATCCCTTTGATTCCAAAACAATGTGGAGTTTCCGTCCAAATTCCTCCCATAAAAAATTCCACTGACTGCTCAAAGTAA

mRNA sequence

ATGTCGGGAATCTTCAATATTCGGTCCCTAGCCTTCGTGGCCGTGTTTACATGCTCGCTGATGGTGGTTCTGTCTCAGAATGAGGATCTGGAAAGTTGTGTACCGGTGGCACAGGCGCTAGCACCATGTTTGGGGTTCATCAAAGGCAACGGCAAACCATCGGCGTCGTGCTGCAGTGGCGTTAAACAGTTGGCGCGAGATACTAAAACGAAGAAAGATAAAGTTGCACTGTGCGAATGCGTCAAGAAGAGTTTGTCAGTGATCGGAACTTATGATCCGAGTCGCATCCCTTTGATTCCAAAACAATGTGGAGTTTCCGTCCAAATTCCTCCCATAAAAAATTCCACTGACTGCTCAAAGTAA

Coding sequence (CDS)

ATGTCGGGAATCTTCAATATTCGGTCCCTAGCCTTCGTGGCCGTGTTTACATGCTCGCTGATGGTGGTTCTGTCTCAGAATGAGGATCTGGAAAGTTGTGTACCGGTGGCACAGGCGCTAGCACCATGTTTGGGGTTCATCAAAGGCAACGGCAAACCATCGGCGTCGTGCTGCAGTGGCGTTAAACAGTTGGCGCGAGATACTAAAACGAAGAAAGATAAAGTTGCACTGTGCGAATGCGTCAAGAAGAGTTTGTCAGTGATCGGAACTTATGATCCGAGTCGCATCCCTTTGATTCCAAAACAATGTGGAGTTTCCGTCCAAATTCCTCCCATAAAAAATTCCACTGACTGCTCAAAGTAA
Homology
[Close]
BLAST of CSPI03G07980 vs. Swiss-Prot
Match: NLTP6_AMBAR (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.4e-16
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 1 

Query: 32  SCVPVAQALAPCLGFIKGNGKPSASCCSGVKQLARDTKTKKDKVALCECVKKSLSVIGTY 91
           +C  V   LAPC GF+ G  +PS +CC+GV  L    KTK D+VA+C C+K+    I  Y
Sbjct: 29  TCDTVQNILAPCAGFLTGQ-EPSKACCTGVNNLNNSRKTKADRVAVCNCIKELTKSIA-Y 88

Query: 92  DPSRIPLIPKQCGVSVQIPPIKNSTDCSK 121
           DP R+PL+  +CGV    P +  + DCSK
Sbjct: 89  DPKRMPLLSTKCGVKPDFPAVDKNLDCSK 115

[Close]
BLAST of CSPI03G07980 vs. Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-14
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 1 

Query: 10  LAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNG-KPSASCCSGVKQLARDT 69
           L  VA+    L+V     +   SC  V+ AL+PC+ + +GNG KP  +CCSGVK+LA   
Sbjct: 9   LVLVAMVAAMLLVA---TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAA 68

Query: 70  KTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 121
           ++  DK A C C+K   + I   +  ++  +P +CGVSV   PI  STDC+K
Sbjct: 69  QSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPF-PISMSTDCNK 116

[Close]
BLAST of CSPI03G07980 vs. Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-14
Identity = 50/112 (44.64%), Postives = 63/112 (56.25%), Query Frame = 1 

Query: 10  LAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNG-KPSASCCSGVKQLARDT 69
           LA VA+    L+V     +   +C  V+ AL PC  + KG+G  PSA CCSGVK+LA   
Sbjct: 9   LALVALVAAMLLVAA---DAAITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLA 68

Query: 70  KTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 121
           ++  DK A C C+K   SV G Y+  R   IP +CGVSV    I  S DCSK
Sbjct: 69  RSTADKQATCRCLK---SVAGAYNAGRAAGIPSRCGVSVPY-TISASVDCSK 113

[Close]
BLAST of CSPI03G07980 vs. Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.1e-14
Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 1 

Query: 8   RSLAFVAVFTCSLMVVLSQNEDLE-SCVPVAQALAPCLGFIKGNGK-PSASCCSGVKQLA 67
           + LA VA    +L+++ +   +   SC  VA A+APC+ + +G G  PSA CCSGV+ L 
Sbjct: 5   QQLAVVATAVVALVLLAAATSEAAISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLN 64

Query: 68  RDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 121
              +T  D+ A C C+K + + +   +      IP +CGVS+    I  STDCS+
Sbjct: 65  NAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPY-TISTSTDCSR 118

[Close]
BLAST of CSPI03G07980 vs. Swiss-Prot
Match: NLT21_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 1 

Query: 31  ESCVPVAQALAPCLGFIKGNGK-PSASCCSGVKQLARDTKTKKDKVALCECVKKSLSVIG 90
           E+C  V Q + PCL F+KG  K PS  CCSG K+L+ + KT + K   C+C+ ++   I 
Sbjct: 33  EACGKVVQDIMPCLHFVKGEEKEPSKECCSGTKKLSEEVKTTEQKREACKCIVRATKGIS 92

Query: 91  TYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 121
                 +  +PK+C +   +PPI    DCSK
Sbjct: 93  GIKNELVAEVPKKCDIKTTLPPITADFDCSK 123

[Close]
BLAST of CSPI03G07980 vs. TrEMBL
Match: A0A0A0L5X1_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.1e-61
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MSGIFNIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSG 60
           MSGIFNIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSG
Sbjct: 1   MSGIFNIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSG 60

Query: 61  VKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 120
           VKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK
Sbjct: 61  VKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 120

[Close]
BLAST of CSPI03G07980 vs. TrEMBL
Match: A0A061DSH8_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao GN=TCM_005159 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 9.8e-23
Identity = 52/117 (44.44%), Postives = 75/117 (64.10%), Query Frame = 1 

Query: 6   NIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNG--KPSASCCSGVKQ 65
           +I  LA + +   S +     +    SC  V +A+APCL F+KG G   PS +CC G + 
Sbjct: 4   SINFLAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGKGGADPSQACCDGARD 63

Query: 66  LARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 121
           LA++ +TK D+ A+CEC+K +L  +G+YD SR+PLI K+C V + IPPI + TDCSK
Sbjct: 64  LAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCSK 120

[Close]
BLAST of CSPI03G07980 vs. TrEMBL
Match: M5XSP9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023612mg PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.1e-21
Identity = 51/115 (44.35%), Postives = 77/115 (66.96%), Query Frame = 1 

Query: 8   RSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNG--KPSASCCSGVKQLA 67
           R + F+AV    L+ + S      SC  V Q +APCL F+KG    KPS  CC GVK+L+
Sbjct: 3   RLIGFLAV----LLFLSSSANSAPSCPTVTQQVAPCLSFVKGGSDTKPSEECCKGVKELS 62

Query: 68  RDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 121
            +  ++ D+ A+C+C+K+ LS +G Y+PS++ L+PK+CG+S+ +PPI  +TDCSK
Sbjct: 63  VNANSRPDREAVCKCLKQVLSSVGNYNPSQVSLLPKKCGLSLNLPPIDKNTDCSK 113

[Close]
BLAST of CSPI03G07980 vs. TrEMBL
Match: A0A151TY04_CAJCA (Non-specific lipid-transfer protein OS=Cajanus cajan GN=KK1_011210 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-20
Identity = 49/116 (42.24%), Postives = 80/116 (68.97%), Query Frame = 1 

Query: 8   RSLAFVAVFTCSLMVVLSQNEDLES--CVPVAQALAPCLGFIK-GNGKPSASCCSGVKQL 67
           R+  F+A     +++++++ E L S  C  V + +APC  F++    KPS +CCSGVK++
Sbjct: 5   RTATFLAGLLSIVILIITRCEALASVPCSTVIEEVAPCTSFLQESTKKPSQACCSGVKKV 64

Query: 68  ARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 121
           + +  TKKD+  +C+C+K+ L+++G YDP+ IP +PK CG+SV++PPI   TDCSK
Sbjct: 65  SGEGVTKKDRADICQCLKEGLALVGNYDPNLIPQLPKACGLSVKLPPIDKKTDCSK 120

[Close]
BLAST of CSPI03G07980 vs. TrEMBL
Match: A0A0B2RU93_GLYSO (Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19
Identity = 41/90 (45.56%), Postives = 65/90 (72.22%), Query Frame = 1 

Query: 32  SCVPVAQALAPCLGFIKGNG-KPSASCCSGVKQLARDTKTKKDKVALCECVKKSLSVIGT 91
           SC  V + +APC  F++G   +PS +CC+G+K+L+ +  T +++ A+C+C+K+ L+ IG 
Sbjct: 24  SCATVIEEVAPCTSFLQGGSKQPSVACCNGIKKLSGEAGTHQNRTAICQCLKEGLASIGN 83

Query: 92  YDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 121
           YDP R+P +PK CG+S  +PPI  +TDCSK
Sbjct: 84  YDPKRVPQVPKDCGLSATLPPIDKNTDCSK 113

[Close]
BLAST of CSPI03G07980 vs. TAIR10
Match: AT2G18370.1 (AT2G18370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10
Identity = 36/114 (31.58%), Postives = 57/114 (50.00%), Query Frame = 1 

Query: 7   IRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFI-KGNGKPSASCCSGVKQLA 66
           ++ LA ++V    +  +   +E   SC  V Q L PC+ ++  G+G P  +CC GVK LA
Sbjct: 4   LKCLAIISVL--GIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLA 63

Query: 67  RDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 120
             T T  DK A C+C+K   + + T  P     +   CG S+ +     + DC+
Sbjct: 64  AATTTSADKKAACQCIKSVANSV-TVKPELAQALASNCGASLPV-DASPTVDCT 113

[Close]
BLAST of CSPI03G07980 vs. TAIR10
Match: AT5G01870.1 (AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-07
Identity = 31/93 (33.33%), Postives = 48/93 (51.61%), Query Frame = 1 

Query: 32  SCVPVAQALAPCLGFIKGNGKPSASCCSGVKQLARDTKTKKDKVALCECVKKSLSVIGTY 91
           SC  V   L PC+ ++   G    SCC+G++ L++   +  DK  +C C+K   SV+G  
Sbjct: 25  SCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQGVCRCIK---SVVGRV 84

Query: 92  DPSRIPL-----IPKQCGVSVQIPPIKNSTDCS 120
             S I L     +P +CGV +    I  ST+C+
Sbjct: 85  SYSSIYLKKAAALPGKCGVKLPY-KIDPSTNCN 113

[Close]
BLAST of CSPI03G07980 vs. TAIR10
Match: AT3G51600.1 (AT3G51600.1 lipid transfer protein 5)

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07
Identity = 32/120 (26.67%), Postives = 55/120 (45.83%), Query Frame = 1 

Query: 1   MSGIFNIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSG 60
           M G+  + +L  V    C L+     +E   SC  V  +L  C  ++   G     CCSG
Sbjct: 1   MEGLLKLSTLVIV----CMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSG 60

Query: 61  VKQLARDTKTKKDKVALCECVKKSLSVIGT-YDPSRIPLIPKQCGVSVQIPPIKNSTDCS 120
           V++L    +T +D+   C C++ +   +G+  +  R   +P  C V +   PI   T+C+
Sbjct: 61  VQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISY-PISARTNCN 115

[Close]
BLAST of CSPI03G07980 vs. TAIR10
Match: AT3G08770.2 (AT3G08770.2 lipid transfer protein 6)

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07
Identity = 31/102 (30.39%), Postives = 47/102 (46.08%), Query Frame = 1 

Query: 20  LMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSGVKQLARDTKTKKDKVALCE 79
           L++ L   E   SC  V   L PCL ++   G     CC+G+  L    +T  D+  +C 
Sbjct: 10  LVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCR 69

Query: 80  CVKKSLSVIGTYDPSRIP---LIPKQCGVSVQIPPIKNSTDC 119
           C+K ++  + T  P  I     +P +CGV +       STDC
Sbjct: 70  CIKSAIGGL-TLSPRTIQNALELPSKCGVDLPY-KFSPSTDC 109

[Close]
BLAST of CSPI03G07980 vs. TAIR10
Match: AT2G15325.1 (AT2G15325.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 48.9 bits (115), Expect = 2.5e-06
Identity = 34/114 (29.82%), Postives = 54/114 (47.37%), Query Frame = 1 

Query: 9   SLAFVAVFTCSLMVV-LSQNEDLESCVPVAQALAPCLGFIKG--NGKPSASCCSGVKQLA 68
           S+AFV   T  +  + +     L  C      L PCL ++      KPS  CCSG+ ++ 
Sbjct: 6   SIAFVIAITIFMSHLNVFTVYSLTPCEEATNLLTPCLRYLWAPPEAKPSPECCSGLDKVN 65

Query: 69  RDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 120
           +  KT  D+  +C C+  S + I + D  +   +PK C V++   P+    DCS
Sbjct: 66  KGVKTYDDRHDMCICL-SSEAAITSADQYKFDNLPKLCNVAL-FAPVGPKFDCS 117

[Close]
BLAST of CSPI03G07980 vs. NCBI nr
Match: gi|700201296|gb|KGN56429.1| (hypothetical protein Csa_3G119620 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 5.8e-61
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MSGIFNIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSG 60
           MSGIFNIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSG
Sbjct: 1   MSGIFNIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSG 60

Query: 61  VKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 120
           VKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK
Sbjct: 61  VKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 120

[Close]
BLAST of CSPI03G07980 vs. NCBI nr
Match: gi|778676915|ref|XP_004134304.2| (PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 5.8e-61
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MSGIFNIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSG 60
           MSGIFNIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSG
Sbjct: 1   MSGIFNIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSG 60

Query: 61  VKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 120
           VKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK
Sbjct: 61  VKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 120

[Close]
BLAST of CSPI03G07980 vs. NCBI nr
Match: gi|659074983|ref|XP_008437901.1| (PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 7.6e-53
Identity = 102/120 (85.00%), Postives = 114/120 (95.00%), Query Frame = 1 

Query: 1   MSGIFNIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGKPSASCCSG 60
           MSG+FN RSLAFVAV TCSLMVVLSQ ED+ESCVPVAQ+L+PCLGFIKG+GKPSASCCSG
Sbjct: 1   MSGVFNFRSLAFVAVLTCSLMVVLSQTEDVESCVPVAQSLSPCLGFIKGSGKPSASCCSG 60

Query: 61  VKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 120
           VKQLA +TKTKKDKVALCEC+KKSL++IG YDP+RIPLIPKQCG+SVQIPPI NST+CSK
Sbjct: 61  VKQLAGNTKTKKDKVALCECIKKSLAMIGPYDPTRIPLIPKQCGISVQIPPINNSTNCSK 120

[Close]
BLAST of CSPI03G07980 vs. NCBI nr
Match: gi|590721283|ref|XP_007051567.1| (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22
Identity = 52/117 (44.44%), Postives = 75/117 (64.10%), Query Frame = 1 

Query: 6   NIRSLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNG--KPSASCCSGVKQ 65
           +I  LA + +   S +     +    SC  V +A+APCL F+KG G   PS +CC G + 
Sbjct: 4   SINFLAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGKGGADPSQACCDGARD 63

Query: 66  LARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 121
           LA++ +TK D+ A+CEC+K +L  +G+YD SR+PLI K+C V + IPPI + TDCSK
Sbjct: 64  LAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCSK 120

[Close]
BLAST of CSPI03G07980 vs. NCBI nr
Match: gi|470141935|ref|XP_004306679.1| (PREDICTED: probable non-specific lipid-transfer protein 2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 112.5 bits (280), Expect = 5.3e-22
Identity = 50/103 (48.54%), Postives = 73/103 (70.87%), Query Frame = 1 

Query: 19  SLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK-PSASCCSGVKQLARDTKTKKDKVAL 78
           ++++ +S      +C  V + LAPCL F+KG+ K PS +CCSG K+L+ + +T KDK A+
Sbjct: 9   AILLFVSAAHSAPTCPVVTKKLAPCLPFVKGSSKDPSPACCSGAKELSNNVQTSKDKQAV 68

Query: 79  CECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCSK 121
           C C+KK+LS IG Y PS++ LIPK+CG+ + +PPI   TDCSK
Sbjct: 69  CMCLKKTLSTIGDYQPSKLSLIPKKCGLKLVLPPIDKKTDCSK 111

The following BLAST results are available for this feature:
BLAST of CSPI03G07980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP6_AMBAR4.4e-1644.94Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1[more]
NLTP3_HORVU1.8e-1440.18Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1[more]
NLTP8_HORVU4.1e-1444.64Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1[more]
NLTP_MAIZE9.1e-1436.52Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1[more]
NLT21_PARJU2.6e-1338.46Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1[more]
BLAST of CSPI03G07980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5X1_CUCSA4.1e-61100.00Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1[more]
A0A061DSH8_THECC9.8e-2344.44Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
M5XSP9_PRUPE3.1e-2144.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023612mg PE=3 SV=1[more]
A0A151TY04_CAJCA2.0e-2042.24Non-specific lipid-transfer protein OS=Cajanus cajan GN=KK1_011210 PE=3 SV=1[more]
A0A0B2RU93_GLYSO1.7e-1945.56Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1[more]
BLAST of CSPI03G07980 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G18370.11.7e-1031.58 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G01870.11.8e-0733.33 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G51600.13.0e-0726.67 lipid transfer protein 5[more]
AT3G08770.23.0e-0730.39 lipid transfer protein 6[more]
AT2G15325.12.5e-0629.82 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of CSPI03G07980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201296|gb|KGN56429.1|5.8e-61100.00hypothetical protein Csa_3G119620 [Cucumis sativus][more]
gi|778676915|ref|XP_004134304.2|5.8e-61100.00PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus][more]
gi|659074983|ref|XP_008437901.1|7.6e-5385.00PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo][more]
gi|590721283|ref|XP_007051567.1|1.4e-2244.44Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
gi|470141935|ref|XP_004306679.1|5.3e-2248.54PREDICTED: probable non-specific lipid-transfer protein 2 [Fragaria vesca subsp.... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000528Plant_LTP
IPR016140Bifunc_inhib/LTP/seed_store
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0008289 lipid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G07980.1CSPI03G07980.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant lipid transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 73..88
score: 5.0E-17coord: 90..107
score: 5.0E-17coord: 109..120
score: 5.0E-17coord: 32..48
score: 5.0E-17coord: 52..66
score: 5.0
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF00234Tryp_alpha_amylcoord: 31..116
score: 6.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 33..118
score: 8.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 32..119
score: 2.27
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 32..120
score: 8.2
NoneNo IPR availablePANTHERPTHR33076FAMILY NOT NAMEDcoord: 1..119
score: 1.0
NoneNo IPR availablePANTHERPTHR33076:SF9SUBFAMILY NOT NAMEDcoord: 1..119
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G07980Cla021161Watermelon (97103) v1cpiwmB231
CSPI03G07980Csa3G119620Cucumber (Chinese Long) v2cpicuB120
CSPI03G07980ClCG05G000860Watermelon (Charleston Gray)cpiwcgB226
CSPI03G07980Lsi05G021190Bottle gourd (USVL1VR-Ls)cpilsiB207
CSPI03G07980CsaV3_3G008100Cucumber (Chinese Long) v3cpicucB144
CSPI03G07980Cla97C05G081020Watermelon (97103) v2cpiwmbB209
CSPI03G07980Bhi01G000346Wax gourdcpiwgoB284
CSPI03G07980CmaCh00G002890Cucurbita maxima (Rimu)cmacpiB005
CSPI03G07980CmaCh06G010580Cucurbita maxima (Rimu)cmacpiB842
CSPI03G07980CmoCh06G010430Cucurbita moschata (Rifu)cmocpiB814
CSPI03G07980CmoCh14G021690Cucurbita moschata (Rifu)cmocpiB243
CSPI03G07980Cp4.1LG03g16090Cucurbita pepo (Zucchini)cpecpiB611
CSPI03G07980CsGy3G008120Cucumber (Gy14) v2cgybcpiB110
CSPI03G07980Carg20891Silver-seed gourdcarcpiB1031
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G07980Cucumber (Chinese Long) v2cpicuB134
CSPI03G07980Cucumber (Chinese Long) v2cpicuB136
CSPI03G07980Melon (DHL92) v3.5.1cpimeB166
CSPI03G07980Melon (DHL92) v3.5.1cpimeB230
CSPI03G07980Melon (DHL92) v3.5.1cpimeB249
CSPI03G07980Melon (DHL92) v3.5.1cpimeB252
CSPI03G07980Watermelon (Charleston Gray)cpiwcgB206
CSPI03G07980Watermelon (Charleston Gray)cpiwcgB246
CSPI03G07980Watermelon (97103) v1cpiwmB257
CSPI03G07980Cucurbita pepo (Zucchini)cpecpiB722
CSPI03G07980Cucurbita pepo (Zucchini)cpecpiB864
CSPI03G07980Bottle gourd (USVL1VR-Ls)cpilsiB150
CSPI03G07980Melon (DHL92) v3.6.1cpimedB157
CSPI03G07980Melon (DHL92) v3.6.1cpimedB224
CSPI03G07980Melon (DHL92) v3.6.1cpimedB248
CSPI03G07980Cucumber (Gy14) v2cgybcpiB166
CSPI03G07980Cucumber (Gy14) v2cgybcpiB208
CSPI03G07980Silver-seed gourdcarcpiB0137
CSPI03G07980Cucumber (Chinese Long) v3cpicucB161
CSPI03G07980Cucumber (Chinese Long) v3cpicucB163
CSPI03G07980Watermelon (97103) v2cpiwmbB176
CSPI03G07980Watermelon (97103) v2cpiwmbB231
CSPI03G07980Wax gourdcpiwgoB261
CSPI03G07980Wax gourdcpiwgoB296
CSPI03G07980Wild cucumber (PI 183967)cpicpiB108
CSPI03G07980Wild cucumber (PI 183967)cpicpiB110
CSPI03G07980Cucumber (Gy14) v1cgycpiB129
CSPI03G07980Cucumber (Gy14) v1cgycpiB320
CSPI03G07980Cucumber (Gy14) v1cgycpiB383
CSPI03G07980Cucurbita maxima (Rimu)cmacpiB255
CSPI03G07980Cucurbita maxima (Rimu)cmacpiB289
CSPI03G07980Cucurbita maxima (Rimu)cmacpiB830
CSPI03G07980Cucurbita moschata (Rifu)cmocpiB278
CSPI03G07980Cucurbita moschata (Rifu)cmocpiB599