ClCG05G000860 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G000860
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionNon-specific lipid-transfer protein
LocationCG_Chr05 : 925667 .. 926029 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGGCGTAGCCTTCGTCGCGGTGTTGGTATGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCGTCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCAAAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACCGACTGCTCAACGTAA

mRNA sequence

ATGGGGGGCGTAGCCTTCGTCGCGGTGTTGGTATGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCGTCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCAAAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACCGACTGCTCAACGTAA

Coding sequence (CDS)

ATGGGGGGCGTAGCCTTCGTCGCGGTGTTGGTATGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCGTCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCAAAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACCGACTGCTCAACGTAA

Protein sequence

MGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCST
Homology
[Close]
BLAST of ClCG05G000860 vs. Swiss-Prot
Match: NLTP6_AMBAR (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-15
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 1 

Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSL 85
           +C  V   L+PC GF+ G       + PS +CC+GV  L    KTK D+VA+C CIK+  
Sbjct: 29  TCDTVQNILAPCAGFLTG-------QEPSKACCTGVNNLNNSRKTKADRVAVCNCIKELT 88

Query: 86  SMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
             I  YDP R+PL+  +CG+    P +D + DCS
Sbjct: 89  KSIA-YDPKRMPLLSTKCGVKPDFPAVDKNLDCS 114

[Close]
BLAST of ClCG05G000860 vs. Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.8e-15
Identity = 42/117 (35.90%), Postives = 60/117 (51.28%), Query Frame = 1 

Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           V+ +  L+C +++     E   SC  V+  L PCL ++KG      G  PSP CC GVK+
Sbjct: 6   VSCLVALMCMVVISAPMAEAAISCGTVSGALVPCLTYLKG------GPGPSPQCCGGVKR 65

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCST 121
           L G A+T  D+ A C C+K S   I    P  +  +P +CG+ +    I  ST+C+T
Sbjct: 66  LNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPY-TISTSTNCNT 115

[Close]
BLAST of ClCG05G000860 vs. Swiss-Prot
Match: NLT12_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.3e-14
Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 1 

Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKS 84
           E+C  V + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+ +
Sbjct: 39  ETCGTVVRALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGLQRVHACECIQTA 98

Query: 85  LSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCST 121
           +      D   +  +PK CGI   ++PPID + DC T
Sbjct: 99  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 130

[Close]
BLAST of ClCG05G000860 vs. Swiss-Prot
Match: NLT11_PARJU (Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica GN=PMAI PE=1 SV=3)

HSP 1 Score: 77.8 bits (190), Expect = 9.0e-14
Identity = 37/97 (38.14%), Postives = 53/97 (54.64%), Query Frame = 1 

Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKS 84
           E+C  + + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+ +
Sbjct: 2   ETCGTMVRALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGPQRVHACECIQTA 61

Query: 85  LSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCST 121
           +      D   +  +PK CGI   ++PPID + DC T
Sbjct: 62  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 93

[Close]
BLAST of ClCG05G000860 vs. Swiss-Prot
Match: NLT13_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.0e-14
Identity = 38/97 (39.18%), Postives = 52/97 (53.61%), Query Frame = 1 

Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKS 84
           E+C  V   L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+ +
Sbjct: 38  ETCGTVVGALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGPQRVHACECIQTA 97

Query: 85  LSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCST 121
           +      D   +  +PK CGI   ++PPID + DC T
Sbjct: 98  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 129

[Close]
BLAST of ClCG05G000860 vs. TrEMBL
Match: A0A0A0L5X1_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.4e-42
Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 1 

Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           +AFVAV  CSLMV LSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK+
Sbjct: 10  LAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVKQ 69

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           L  D KTKKDKVALCEC+KKSLS+IG YDPSRIPLIPK+CG+ +QIPPI NSTDCS
Sbjct: 70  LARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]
BLAST of ClCG05G000860 vs. TrEMBL
Match: A0A061DSH8_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao GN=TCM_005159 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.8e-22
Identity = 52/119 (43.70%), Postives = 77/119 (64.71%), Query Frame = 1 

Query: 4   VAFVAVLVCSLMVGLSQNED---VESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 63
           + F+A+LV  ++  L+  E      SC  V + ++PCL F+KG     GG +PS +CC G
Sbjct: 5   INFLAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGK----GGADPSQACCDG 64

Query: 64  VKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
            + L  +A+TK D+ A+CEC+K +L  +G YD SR+PLI K+C + I IPPI++ TDCS
Sbjct: 65  ARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCS 119

[Close]
BLAST of ClCG05G000860 vs. TrEMBL
Match: I1JRZ7_SOYBN (Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_03G257200 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-21
Identity = 44/94 (46.81%), Postives = 68/94 (72.34%), Query Frame = 1 

Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSL 85
           SC  V +E++PC  F++G     G + PS +CC+G+KKL G+A T +++ A+C+C+K+ L
Sbjct: 24  SCATVIEEVAPCTSFLQG-----GSKQPSVACCNGIKKLSGEAGTHQNRTAICQCLKEGL 83

Query: 86  SMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           + IG YDP R+P +PK+CG+   +PPID +TDCS
Sbjct: 84  ATIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCS 112

[Close]
BLAST of ClCG05G000860 vs. TrEMBL
Match: A0A0B2RU93_GLYSO (Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-21
Identity = 44/94 (46.81%), Postives = 68/94 (72.34%), Query Frame = 1 

Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSL 85
           SC  V +E++PC  F++G     G + PS +CC+G+KKL G+A T +++ A+C+C+K+ L
Sbjct: 24  SCATVIEEVAPCTSFLQG-----GSKQPSVACCNGIKKLSGEAGTHQNRTAICQCLKEGL 83

Query: 86  SMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           + IG YDP R+P +PK+CG+   +PPID +TDCS
Sbjct: 84  ASIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCS 112

[Close]
BLAST of ClCG05G000860 vs. TrEMBL
Match: A0A151TY04_CAJCA (Non-specific lipid-transfer protein OS=Cajanus cajan GN=KK1_011210 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-20
Identity = 48/116 (41.38%), Postives = 80/116 (68.97%), Query Frame = 1 

Query: 6   FVAVLVCSLMVGLSQNEDVES--CVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 65
           F+A L+  +++ +++ E + S  C  V +E++PC  F++ S      + PS +CCSGVKK
Sbjct: 9   FLAGLLSIVILIITRCEALASVPCSTVIEEVAPCTSFLQEST-----KKPSQACCSGVKK 68

Query: 66  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           + G+  TKKD+  +C+C+K+ L+++G YDP+ IP +PK CG+ +++PPID  TDCS
Sbjct: 69  VSGEGVTKKDRADICQCLKEGLALVGNYDPNLIPQLPKACGLSVKLPPIDKKTDCS 119

[Close]
BLAST of ClCG05G000860 vs. TAIR10
Match: AT5G59310.1 (AT5G59310.1 lipid transfer protein 4)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 1 

Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSL 85
           +C  VA  LSPCLG++       GG  P P CC+GVKKL G A+T  D+   C C++ + 
Sbjct: 26  TCGTVASSLSPCLGYLSK-----GGVVPPP-CCAGVKKLNGMAQTTPDRQQACRCLQSAA 85

Query: 86  SMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCST 121
             +   +PS    +P +CG+ I   PI  ST+C+T
Sbjct: 86  KGV---NPSLASGLPGKCGVSIPY-PISTSTNCAT 110

[Close]
BLAST of ClCG05G000860 vs. TAIR10
Match: AT2G38540.1 (AT2G38540.1 lipid transfer protein 1)

HSP 1 Score: 63.9 bits (154), Expect = 7.6e-11
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 1 

Query: 1   MGGVAFVA--VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCC 60
           M GV  +A  +L C ++ G   +    SC  V   L+ C+G++       GG  P P+CC
Sbjct: 1   MAGVMKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQ-----GGVIP-PACC 60

Query: 61  SGVKKLVGDAKTKKDKVALCECIKKSLSMIGP-YDPSRIPLIPKECGIPIQIPPIDNSTD 120
           SGVK L   AKT  D+   C CI+ +   +G   +  R   IPK CG+ I    I  ST+
Sbjct: 61  SGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPY-KISTSTN 116

[Close]
BLAST of ClCG05G000860 vs. TAIR10
Match: AT2G15050.1 (AT2G15050.1 lipid transfer protein)

HSP 1 Score: 61.6 bits (148), Expect = 3.8e-10
Identity = 36/97 (37.11%), Postives = 46/97 (47.42%), Query Frame = 1 

Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSL 85
           SC  V   L PC G++       G  +P P CC+GV+KL G   T  D+   C CIK + 
Sbjct: 28  SCGEVNSNLKPCTGYLTNG----GITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAA 87

Query: 86  SMIGP-YDPSRIPLIPKECGIPIQI-PPIDNSTDCST 121
             +GP  +  R   IP+ CGI I     I  +T C+T
Sbjct: 88  RNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCNT 120

[Close]
BLAST of ClCG05G000860 vs. TAIR10
Match: AT3G08770.2 (AT3G08770.2 lipid transfer protein 6)

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-07
Identity = 35/116 (30.17%), Postives = 53/116 (45.69%), Query Frame = 1 

Query: 9   VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDA 68
           +L   L++ L   E   SC  V  +L PCL ++       GG  P+  CC+G+  L   A
Sbjct: 5   LLAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQ-----GGPVPT-LCCNGLTTLKSQA 64

Query: 69  KTKKDKVALCECIKKSLS--MIGPYDPSRIPLIPKECGI--PIQIPPIDNSTDCST 121
           +T  D+  +C CIK ++    + P        +P +CG+  P +  P   STDC +
Sbjct: 65  QTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSP---STDCDS 111

[Close]
BLAST of ClCG05G000860 vs. TAIR10
Match: AT3G51600.1 (AT3G51600.1 lipid transfer protein 5)

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07
Identity = 35/113 (30.97%), Postives = 51/113 (45.13%), Query Frame = 1 

Query: 9   VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDA 68
           V+VC L+     +E   SC  V   L  C  ++       GG  P   CCSGV++L   A
Sbjct: 11  VIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTR-----GGFIPR-GCCSGVQRLNSLA 70

Query: 69  KTKKDKVALCECIKKSLSMIGP-YDPSRIPLIPKECGIPIQIPPIDNSTDCST 121
           +T +D+   C CI+ +   +G   +  R   +P  C + I   PI   T+C+T
Sbjct: 71  RTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISY-PISARTNCNT 116

[Close]
BLAST of ClCG05G000860 vs. NCBI nr
Match: gi|659074983|ref|XP_008437901.1| (PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo])

HSP 1 Score: 186.4 bits (472), Expect = 2.9e-44
Identity = 91/116 (78.45%), Postives = 100/116 (86.21%), Query Frame = 1 

Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           +AFVAVL CSLMV LSQ EDVESCVPVAQ LSPCLGFIKGS        PS SCCSGVK+
Sbjct: 10  LAFVAVLTCSLMVVLSQTEDVESCVPVAQSLSPCLGFIKGSGK------PSASCCSGVKQ 69

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           L G+ KTKKDKVALCECIKKSL+MIGPYDP+RIPLIPK+CGI +QIPPI+NST+CS
Sbjct: 70  LAGNTKTKKDKVALCECIKKSLAMIGPYDPTRIPLIPKQCGISVQIPPINNSTNCS 119

[Close]
BLAST of ClCG05G000860 vs. NCBI nr
Match: gi|700201296|gb|KGN56429.1| (hypothetical protein Csa_3G119620 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 1 

Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           +AFVAV  CSLMV LSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK+
Sbjct: 10  LAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVKQ 69

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           L  D KTKKDKVALCEC+KKSLS+IG YDPSRIPLIPK+CG+ +QIPPI NSTDCS
Sbjct: 70  LARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]
BLAST of ClCG05G000860 vs. NCBI nr
Match: gi|778676915|ref|XP_004134304.2| (PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 1 

Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           +AFVAV  CSLMV LSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK+
Sbjct: 10  LAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVKQ 69

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           L  D KTKKDKVALCEC+KKSLS+IG YDPSRIPLIPK+CG+ +QIPPI NSTDCS
Sbjct: 70  LARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]
BLAST of ClCG05G000860 vs. NCBI nr
Match: gi|470141935|ref|XP_004306679.1| (PREDICTED: probable non-specific lipid-transfer protein 2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22
Identity = 54/116 (46.55%), Postives = 78/116 (67.24%), Query Frame = 1 

Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           V F+A+L+      +S      +C  V ++L+PCL F+KGS      ++PSP+CCSG K+
Sbjct: 5   VTFLAILLF-----VSAAHSAPTCPVVTKKLAPCLPFVKGSS-----KDPSPACCSGAKE 64

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           L  + +T KDK A+C C+KK+LS IG Y PS++ LIPK+CG+ + +PPID  TDCS
Sbjct: 65  LSNNVQTSKDKQAVCMCLKKTLSTIGDYQPSKLSLIPKKCGLKLVLPPIDKKTDCS 110

[Close]
BLAST of ClCG05G000860 vs. NCBI nr
Match: gi|590721283|ref|XP_007051567.1| (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 112.8 bits (281), Expect = 4.0e-22
Identity = 52/119 (43.70%), Postives = 77/119 (64.71%), Query Frame = 1 

Query: 4   VAFVAVLVCSLMVGLSQNED---VESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 63
           + F+A+LV  ++  L+  E      SC  V + ++PCL F+KG     GG +PS +CC G
Sbjct: 5   INFLAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGK----GGADPSQACCDG 64

Query: 64  VKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
            + L  +A+TK D+ A+CEC+K +L  +G YD SR+PLI K+C + I IPPI++ TDCS
Sbjct: 65  ARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCS 119

The following BLAST results are available for this feature:
BLAST of ClCG05G000860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP6_AMBAR3.7e-1541.49Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1[more]
NLTP1_LENCU4.8e-1535.90Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1[more]
NLT12_PARJU5.3e-1439.18Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1[more]
NLT11_PARJU9.0e-1438.14Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica GN... [more]
NLT13_PARJU9.0e-1439.18Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1[more]
BLAST of ClCG05G000860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5X1_CUCSA1.4e-4275.00Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1[more]
A0A061DSH8_THECC2.8e-2243.70Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
I1JRZ7_SOYBN1.8e-2146.81Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_03G257200 PE=3 SV=1[more]
A0A0B2RU93_GLYSO1.8e-2146.81Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1[more]
A0A151TY04_CAJCA1.5e-2041.38Non-specific lipid-transfer protein OS=Cajanus cajan GN=KK1_011210 PE=3 SV=1[more]
BLAST of ClCG05G000860 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59310.11.5e-1140.00 lipid transfer protein 4[more]
AT2G38540.17.6e-1135.77 lipid transfer protein 1[more]
AT2G15050.13.8e-1037.11 lipid transfer protein[more]
AT3G08770.21.3e-0730.17 lipid transfer protein 6[more]
AT3G51600.13.0e-0730.97 lipid transfer protein 5[more]
BLAST of ClCG05G000860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074983|ref|XP_008437901.1|2.9e-4478.45PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo][more]
gi|700201296|gb|KGN56429.1|2.1e-4275.00hypothetical protein Csa_3G119620 [Cucumis sativus][more]
gi|778676915|ref|XP_004134304.2|2.1e-4275.00PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus][more]
gi|470141935|ref|XP_004306679.1|1.4e-2246.55PREDICTED: probable non-specific lipid-transfer protein 2 [Fragaria vesca subsp.... [more]
gi|590721283|ref|XP_007051567.1|4.0e-2243.70Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000528Plant_LTP
IPR016140Bifunc_inhib/LTP/seed_store
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0008289 lipid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G000860.1ClCG05G000860.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant lipid transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 26..42
score: 1.1E-9coord: 109..120
score: 1.1E-9coord: 73..88
score: 1.1E-9coord: 90..107
score: 1.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 9..108
score: 1.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 27..118
score: 2.3
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 26..119
score: 5.29
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 26..120
score: 1.3
NoneNo IPR availablePANTHERPTHR33076FAMILY NOT NAMEDcoord: 4..120
score: 2.6
NoneNo IPR availablePANTHERPTHR33076:SF9SUBFAMILY NOT NAMEDcoord: 4..120
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G000860Csa3G119620Cucumber (Chinese Long) v2cuwcgB222
ClCG05G000860Cla021161Watermelon (97103) v1wcgwmB286
ClCG05G000860Cla97C05G081020Watermelon (97103) v2wcgwmbB229
ClCG05G000860Bhi01G000346Wax gourdwcgwgoB439
ClCG05G000860CSPI03G07980Wild cucumber (PI 183967)cpiwcgB226
ClCG05G000860CmaCh00G002890Cucurbita maxima (Rimu)cmawcgB002
ClCG05G000860CmaCh06G010580Cucurbita maxima (Rimu)cmawcgB741
ClCG05G000860CmoCh06G010430Cucurbita moschata (Rifu)cmowcgB743
ClCG05G000860CmoCh14G021690Cucurbita moschata (Rifu)cmowcgB219
ClCG05G000860Lsi05G021190Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G000860Cp4.1LG03g16090Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G000860CsGy3G008120Cucumber (Gy14) v2cgybwcgB203
ClCG05G000860Carg20891Silver-seed gourdcarwcgB0968
ClCG05G000860CsaV3_3G008100Cucumber (Chinese Long) v3cucwcgB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G000860Silver-seed gourdcarwcgB0122
ClCG05G000860Silver-seed gourdcarwcgB0964
ClCG05G000860Cucumber (Chinese Long) v3cucwcgB331
ClCG05G000860Cucumber (Chinese Long) v3cucwcgB413
ClCG05G000860Watermelon (97103) v2wcgwmbB210
ClCG05G000860Watermelon (97103) v2wcgwmbB232
ClCG05G000860Wax gourdwcgwgoB420
ClCG05G000860Wax gourdwcgwgoB444
ClCG05G000860Watermelon (Charleston Gray)wcgwcgB094
ClCG05G000860Watermelon (Charleston Gray)wcgwcgB154
ClCG05G000860Cucumber (Gy14) v1cgywcgB149
ClCG05G000860Cucumber (Gy14) v1cgywcgB377
ClCG05G000860Cucumber (Gy14) v1cgywcgB451
ClCG05G000860Cucurbita maxima (Rimu)cmawcgB233
ClCG05G000860Cucurbita maxima (Rimu)cmawcgB295
ClCG05G000860Cucurbita maxima (Rimu)cmawcgB563
ClCG05G000860Cucurbita maxima (Rimu)cmawcgB738
ClCG05G000860Cucurbita moschata (Rifu)cmowcgB560
ClCG05G000860Wild cucumber (PI 183967)cpiwcgB331
ClCG05G000860Wild cucumber (PI 183967)cpiwcgB410
ClCG05G000860Cucumber (Chinese Long) v2cuwcgB316
ClCG05G000860Cucumber (Chinese Long) v2cuwcgB392
ClCG05G000860Melon (DHL92) v3.5.1mewcgB030
ClCG05G000860Melon (DHL92) v3.5.1mewcgB427
ClCG05G000860Melon (DHL92) v3.5.1mewcgB433
ClCG05G000860Melon (DHL92) v3.5.1mewcgB478
ClCG05G000860Watermelon (97103) v1wcgwmB295
ClCG05G000860Cucurbita pepo (Zucchini)cpewcgB677
ClCG05G000860Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G000860Bottle gourd (USVL1VR-Ls)lsiwcgB018
ClCG05G000860Bottle gourd (USVL1VR-Ls)lsiwcgB342
ClCG05G000860Cucumber (Gy14) v2cgybwcgB294
ClCG05G000860Cucumber (Gy14) v2cgybwcgB357
ClCG05G000860Melon (DHL92) v3.6.1medwcgB028
ClCG05G000860Melon (DHL92) v3.6.1medwcgB416
ClCG05G000860Melon (DHL92) v3.6.1medwcgB472