CmoCh06G010430 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G010430
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionNon-specific lipid-transfer protein
LocationCmo_Chr06 : 8111985 .. 8112377 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGGAATCTACAATCTCCGCTTGATGATCAGTGCACTAACCTTCATCGCCATGCTTACAAGCTCCATGATGGTCGCGCTGTCTCAGAATGTCGACATGGGAAGCTGCATACTGGTGGCGCAGGAGCTATCACCATGTTTGAGCTTCATCAAAGGCAGCGACGGAGGGTTTCTTGGAGAGAATCCACCGCCGTCGTGCTGCAGTGGCGTTACTAAGTTGGCCGCCGATGCTAAAACGAAGAACGATAAGGTTGATTTGTGCGAGTGTATCAAGAAGAGTTTGTCGATGATCGGAGCTTATGATCCGAATCGCATTCCTTCGATTCCCGAAGGCTGCGGAATCCCAGTTCAAATTCCTCCCATCGATAATTCCACCAACTGCTCAGAGTAA

mRNA sequence

ATGTCAGGAATCTACAATCTCCGCTTGATGATCAGTGCACTAACCTTCATCGCCATGCTTACAAGCTCCATGATGGTCGCGCTGTCTCAGAATGTCGACATGGGAAGCTGCATACTGGTGGCGCAGGAGCTATCACCATGTTTGAGCTTCATCAAAGGCAGCGACGGAGGGTTTCTTGGAGAGAATCCACCGCCGTCGTGCTGCAGTGGCGTTACTAAGTTGGCCGCCGATGCTAAAACGAAGAACGATAAGGTTGATTTGTGCGAGTGTATCAAGAAGAGTTTGTCGATGATCGGAGCTTATGATCCGAATCGCATTCCTTCGATTCCCGAAGGCTGCGGAATCCCAGTTCAAATTCCTCCCATCGATAATTCCACCAACTGCTCAGAGTAA

Coding sequence (CDS)

ATGTCAGGAATCTACAATCTCCGCTTGATGATCAGTGCACTAACCTTCATCGCCATGCTTACAAGCTCCATGATGGTCGCGCTGTCTCAGAATGTCGACATGGGAAGCTGCATACTGGTGGCGCAGGAGCTATCACCATGTTTGAGCTTCATCAAAGGCAGCGACGGAGGGTTTCTTGGAGAGAATCCACCGCCGTCGTGCTGCAGTGGCGTTACTAAGTTGGCCGCCGATGCTAAAACGAAGAACGATAAGGTTGATTTGTGCGAGTGTATCAAGAAGAGTTTGTCGATGATCGGAGCTTATGATCCGAATCGCATTCCTTCGATTCCCGAAGGCTGCGGAATCCCAGTTCAAATTCCTCCCATCGATAATTCCACCAACTGCTCAGAGTAA
Homology
[Close]
BLAST of CmoCh06G010430 vs. Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-12
Identity = 41/123 (33.33%), Postives = 67/123 (54.47%), Query Frame = 1 

Query: 8   RLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSC 67
           R   + L  +AM+ + ++VA    +   SC  V+  LSPC+S+ +G+     G  PP +C
Sbjct: 3   RAAATQLVLVAMVAAMLLVATDAAI---SCGQVSSALSPCISYARGN-----GAKPPVAC 62

Query: 68  CSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTN 127
           CSGV +LA  A++  DK   C C+K   + I   +  ++  +P  CG+ V   PI  ST+
Sbjct: 63  CSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPF-PISMSTD 116

Query: 128 CSE 131
           C++
Sbjct: 123 CNK 116

[Close]
BLAST of CmoCh06G010430 vs. Swiss-Prot
Match: NLTP6_AMBAR (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.4e-12
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = 1 

Query: 36  SCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSL 95
           +C  V   L+PC  F+ G +       P  +CC+GV  L    KTK D+V +C CIK+  
Sbjct: 29  TCDTVQNILAPCAGFLTGQE-------PSKACCTGVNNLNNSRKTKADRVAVCNCIKELT 88

Query: 96  SMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSE 131
             I AYDP R+P +   CG+    P +D + +CS+
Sbjct: 89  KSI-AYDPKRMPLLSTKCGVKPDFPAVDKNLDCSK 115

[Close]
BLAST of CmoCh06G010430 vs. Swiss-Prot
Match: NLT22_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11
Identity = 41/123 (33.33%), Postives = 60/123 (48.78%), Query Frame = 1 

Query: 11  ISALTFIAML---TSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSC 70
           ++AL  IA     TSS  +A +     G C  V   + PCL F+KG +     + P  SC
Sbjct: 6   MAALVVIAAALAWTSSAELASAPAPGEGPCGKVVHHIMPCLKFVKGEE-----KEPSKSC 65

Query: 71  CSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTN 130
           CSG  KL+ + KT   K + C+CI  +   I       +  +P+ CGI   +PPI    +
Sbjct: 66  CSGTKKLSEEVKTTEQKREACKCIVAATKGISGIKNELVAEVPKKCGITTTLPPITADFD 123

[Close]
BLAST of CmoCh06G010430 vs. Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.5e-11
Identity = 35/94 (37.23%), Postives = 48/94 (51.06%), Query Frame = 1 

Query: 36  SCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSL 95
           SC  V  +LSPCL+++ G  G      P P CC GV KL A A T  D+   C C+K + 
Sbjct: 28  SCGAVTSDLSPCLTYLTGGPG------PSPQCCGGVKKLLAAANTTPDRQAACNCLKSAA 87

Query: 96  SMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCS 130
             I   + N   ++P  CG+ +    I  STNC+
Sbjct: 88  GSITKLNTNNAAALPGKCGVDIPY-KISTSTNCN 114

[Close]
BLAST of CmoCh06G010430 vs. Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.5e-11
Identity = 38/95 (40.00%), Postives = 49/95 (51.58%), Query Frame = 1 

Query: 36  SCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSL 95
           SC  V  +LSPCL+++ G  G      P P CC GV KL A A T  D+   C C+K + 
Sbjct: 20  SCGAVTSDLSPCLTYLTGGPG------PSPQCCGGVKKLLAAANTTPDRQAACNCLKSAA 79

Query: 96  SMIGAYDPNRIPSIPEGCGIPVQIP-PIDNSTNCS 130
             I   + N   ++P  CG  V IP  I  STNC+
Sbjct: 80  GSITKLNTNNAAALPGKCG--VNIPYKISTSTNCN 106

[Close]
BLAST of CmoCh06G010430 vs. TrEMBL
Match: A0A0A0L5X1_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.1e-35
Identity = 79/130 (60.77%), Postives = 97/130 (74.62%), Query Frame = 1 

Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGI+N+R    +L F+A+ T S+MV LSQN D+ SC+ VAQ L+PCL FIKG+      
Sbjct: 1   MSGIFNIR----SLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNG----- 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
             P  SCCSGV +LA D KTK DKV LCEC+KKSLS+IG YDP+RIP IP+ CG+ VQIP
Sbjct: 61  -KPSASCCSGVKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIP 120

Query: 121 PIDNSTNCSE 131
           PI NST+CS+
Sbjct: 121 PIKNSTDCSK 120

[Close]
BLAST of CmoCh06G010430 vs. TrEMBL
Match: A0A151TY04_CAJCA (Non-specific lipid-transfer protein OS=Cajanus cajan GN=KK1_011210 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 48/123 (39.02%), Postives = 81/123 (65.85%), Query Frame = 1 

Query: 10  MISALTFIAMLTSSMMVALSQNVDMGS--CILVAQELSPCLSFIKGSDGGFLGENPPPSC 69
           M    TF+A L S +++ +++   + S  C  V +E++PC SF++ S      + P  +C
Sbjct: 3   MSRTATFLAGLLSIVILIITRCEALASVPCSTVIEEVAPCTSFLQEST-----KKPSQAC 62

Query: 70  CSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTN 129
           CSGV K++ +  TK D+ D+C+C+K+ L+++G YDPN IP +P+ CG+ V++PPID  T+
Sbjct: 63  CSGVKKVSGEGVTKKDRADICQCLKEGLALVGNYDPNLIPQLPKACGLSVKLPPIDKKTD 120

Query: 130 CSE 131
           CS+
Sbjct: 123 CSK 120

[Close]
BLAST of CmoCh06G010430 vs. TrEMBL
Match: A0A061DSH8_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao GN=TCM_005159 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.0e-18
Identity = 48/124 (38.71%), Postives = 79/124 (63.71%), Query Frame = 1 

Query: 10  MISALTFIAMLTSSMMVALSQ---NVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPS 69
           M  ++ F+AML   M+ AL+    ++   SC  V + ++PCL+F+KG  G     +P  +
Sbjct: 1   MAVSINFLAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGKGGA----DPSQA 60

Query: 70  CCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNST 129
           CC G   LA +A+TKND+  +CEC+K +L  +G+YD +R+P I + C + + IPPI++ T
Sbjct: 61  CCDGARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKT 120

Query: 130 NCSE 131
           +CS+
Sbjct: 121 DCSK 120

[Close]
BLAST of CmoCh06G010430 vs. TrEMBL
Match: V4VXH9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022824mg PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.9e-17
Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 1 

Query: 36  SCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSL 95
           SC  V  +L PCLS+++G       + P  +CCSG  K++  AK++  K D+C CI+KSL
Sbjct: 38  SCDEVILDLVPCLSYLRGET-----KQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSL 97

Query: 96  SMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSE 131
           + +G YD N IP IP+ CGIP+ +PPID  T+CS+
Sbjct: 98  ASVGPYDKNLIPLIPQKCGIPLTLPPIDAKTDCSK 127

[Close]
BLAST of CmoCh06G010430 vs. TrEMBL
Match: A0A067H3L3_CITSI (Non-specific lipid-transfer protein (Fragment) OS=Citrus sinensis GN=CISIN_1g039540mg PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.9e-17
Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 1 

Query: 36  SCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSL 95
           SC  V  +L PCLS+++G       + P  +CCSG  K++  AK++  K D+C CI+KSL
Sbjct: 5   SCDEVILDLVPCLSYLRGET-----KQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSL 64

Query: 96  SMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSE 131
           + +G YD N IP IP+ CGIP+ +PPID  T+CS+
Sbjct: 65  ASVGPYDKNLIPLIPQKCGIPLTLPPIDAKTDCSK 94

[Close]
BLAST of CmoCh06G010430 vs. TAIR10
Match: AT5G59320.1 (AT5G59320.1 lipid transfer protein 3)

HSP 1 Score: 67.4 bits (163), Expect = 7.4e-12
Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 1 

Query: 10  MISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSCCS 69
           M  AL F   L  ++ +  S +  + SC  VA  L+PC +++  S GG +    PPSCC+
Sbjct: 1   MAFALRFFTCLVLTVCIVASVDAAI-SCGTVAGSLAPCATYL--SKGGLV----PPSCCA 60

Query: 70  GVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCS 129
           GV  L + AKT  D+   C CI+ +   I   +P+    +P  CG+ +   PI  STNC+
Sbjct: 61  GVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPY-PISMSTNCN 112

[Close]
BLAST of CmoCh06G010430 vs. TAIR10
Match: AT5G59310.1 (AT5G59310.1 lipid transfer protein 4)

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-09
Identity = 39/120 (32.50%), Postives = 61/120 (50.83%), Query Frame = 1 

Query: 10  MISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSCCS 69
           M  AL F      ++ +  S +  + +C  VA  LSPCL ++  S GG +    PP CC+
Sbjct: 1   MAFALRFFTCFVLTVFIVASVDAAI-TCGTVASSLSPCLGYL--SKGGVV----PPPCCA 60

Query: 70  GVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCS 129
           GV KL   A+T  D+   C C++ +   +   +P+    +P  CG+ +   PI  STNC+
Sbjct: 61  GVKKLNGMAQTTPDRQQACRCLQSAAKGV---NPSLASGLPGKCGVSIPY-PISTSTNCA 109

[Close]
BLAST of CmoCh06G010430 vs. TAIR10
Match: AT2G38540.1 (AT2G38540.1 lipid transfer protein 1)

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-08
Identity = 42/123 (34.15%), Postives = 63/123 (51.22%), Query Frame = 1 

Query: 10  MISALTFIAMLTSSMMVA--LSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSC 69
           M   +    +L + M+VA  ++ N  + SC  V   L+ C+ ++    GG +    PP+C
Sbjct: 1   MAGVMKLACLLLACMIVAGPITSNAAL-SCGSVNSNLAACIGYVL--QGGVI----PPAC 60

Query: 70  CSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA-YDPNRIPSIPEGCGIPVQIP-PIDNS 129
           CSGV  L + AKT  D+   C CI+ +   +G+  +  R   IP+ CG  V IP  I  S
Sbjct: 61  CSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACG--VNIPYKISTS 114

[Close]
BLAST of CmoCh06G010430 vs. TAIR10
Match: AT3G51590.1 (AT3G51590.1 lipid transfer protein 12)

HSP 1 Score: 50.8 bits (120), Expect = 7.2e-07
Identity = 35/116 (30.17%), Postives = 56/116 (48.28%), Query Frame = 1 

Query: 14  LTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPS-CCSGVT 73
           +T + +LT  M       +  G+   V   L+ CL+++  S        P PS CC GV 
Sbjct: 8   ITCLIVLTIYMASPTESTIQCGT---VTSTLAQCLTYLTNS-------GPLPSQCCVGVK 67

Query: 74  KLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNC 129
            L   A+T  D+  +CEC+K +   I   + + + ++P  CG+ +   PI  STNC
Sbjct: 68  SLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPY-PISFSTNC 112

[Close]
BLAST of CmoCh06G010430 vs. TAIR10
Match: AT3G51600.1 (AT3G51600.1 lipid transfer protein 5)

HSP 1 Score: 50.8 bits (120), Expect = 7.2e-07
Identity = 36/122 (29.51%), Postives = 60/122 (49.18%), Query Frame = 1 

Query: 9   LMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSCC 68
           L +S L  + ML ++ M + +      SC  V   L  C +++  + GGF+    P  CC
Sbjct: 5   LKLSTLVIVCMLVTAPMASEAAI----SCGAVTGSLGQCYNYL--TRGGFI----PRGCC 64

Query: 69  SGVTKLAADAKTKNDKVDLCECIKKSLSMIGA-YDPNRIPSIPEGCGIPVQIPPIDNSTN 128
           SGV +L + A+T  D+   C CI+ +   +G+  +  R   +P  C + +   PI   TN
Sbjct: 65  SGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISY-PISARTN 115

Query: 129 CS 130
           C+
Sbjct: 125 CN 115

[Close]
BLAST of CmoCh06G010430 vs. NCBI nr
Match: gi|659074983|ref|XP_008437901.1| (PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-35
Identity = 82/130 (63.08%), Postives = 96/130 (73.85%), Query Frame = 1 

Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSG++N R    +L F+A+LT S+MV LSQ  D+ SC+ VAQ LSPCL FIKGS      
Sbjct: 1   MSGVFNFR----SLAFVAVLTCSLMVVLSQTEDVESCVPVAQSLSPCLGFIKGSG----- 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
             P  SCCSGV +LA + KTK DKV LCECIKKSL+MIG YDP RIP IP+ CGI VQIP
Sbjct: 61  -KPSASCCSGVKQLAGNTKTKKDKVALCECIKKSLAMIGPYDPTRIPLIPKQCGISVQIP 120

Query: 121 PIDNSTNCSE 131
           PI+NSTNCS+
Sbjct: 121 PINNSTNCSK 120

[Close]
BLAST of CmoCh06G010430 vs. NCBI nr
Match: gi|700201296|gb|KGN56429.1| (hypothetical protein Csa_3G119620 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-35
Identity = 79/130 (60.77%), Postives = 97/130 (74.62%), Query Frame = 1 

Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGI+N+R    +L F+A+ T S+MV LSQN D+ SC+ VAQ L+PCL FIKG+      
Sbjct: 1   MSGIFNIR----SLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNG----- 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
             P  SCCSGV +LA D KTK DKV LCEC+KKSLS+IG YDP+RIP IP+ CG+ VQIP
Sbjct: 61  -KPSASCCSGVKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIP 120

Query: 121 PIDNSTNCSE 131
           PI NST+CS+
Sbjct: 121 PIKNSTDCSK 120

[Close]
BLAST of CmoCh06G010430 vs. NCBI nr
Match: gi|778676915|ref|XP_004134304.2| (PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-35
Identity = 79/130 (60.77%), Postives = 97/130 (74.62%), Query Frame = 1 

Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGI+N+R    +L F+A+ T S+MV LSQN D+ SC+ VAQ L+PCL FIKG+      
Sbjct: 1   MSGIFNIR----SLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNG----- 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
             P  SCCSGV +LA D KTK DKV LCEC+KKSLS+IG YDP+RIP IP+ CG+ VQIP
Sbjct: 61  -KPSASCCSGVKQLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIP 120

Query: 121 PIDNSTNCSE 131
           PI NST+CS+
Sbjct: 121 PIKNSTDCSK 120

[Close]
BLAST of CmoCh06G010430 vs. NCBI nr
Match: gi|1012360746|gb|KYP71930.1| (putative non-specific lipid-transfer protein 1 [Cajanus cajan])

HSP 1 Score: 104.0 bits (258), Expect = 2.0e-19
Identity = 48/123 (39.02%), Postives = 81/123 (65.85%), Query Frame = 1 

Query: 10  MISALTFIAMLTSSMMVALSQNVDMGS--CILVAQELSPCLSFIKGSDGGFLGENPPPSC 69
           M    TF+A L S +++ +++   + S  C  V +E++PC SF++ S      + P  +C
Sbjct: 3   MSRTATFLAGLLSIVILIITRCEALASVPCSTVIEEVAPCTSFLQEST-----KKPSQAC 62

Query: 70  CSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTN 129
           CSGV K++ +  TK D+ D+C+C+K+ L+++G YDPN IP +P+ CG+ V++PPID  T+
Sbjct: 63  CSGVKKVSGEGVTKKDRADICQCLKEGLALVGNYDPNLIPQLPKACGLSVKLPPIDKKTD 120

Query: 130 CSE 131
           CS+
Sbjct: 123 CSK 120

[Close]
BLAST of CmoCh06G010430 vs. NCBI nr
Match: gi|590721283|ref|XP_007051567.1| (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 98.6 bits (244), Expect = 8.5e-18
Identity = 48/124 (38.71%), Postives = 79/124 (63.71%), Query Frame = 1 

Query: 10  MISALTFIAMLTSSMMVALSQ---NVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPS 69
           M  ++ F+AML   M+ AL+    ++   SC  V + ++PCL+F+KG  G     +P  +
Sbjct: 1   MAVSINFLAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGKGGA----DPSQA 60

Query: 70  CCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNST 129
           CC G   LA +A+TKND+  +CEC+K +L  +G+YD +R+P I + C + + IPPI++ T
Sbjct: 61  CCDGARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKT 120

Query: 130 NCSE 131
           +CS+
Sbjct: 121 DCSK 120

The following BLAST results are available for this feature:
BLAST of CmoCh06G010430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP3_HORVU3.1e-1233.33Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1[more]
NLTP6_AMBAR5.4e-1236.84Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1[more]
NLT22_PARJU2.0e-1133.33Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1[more]
NLTP6_LENCU3.5e-1137.23Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1[more]
NLTP4_LENCU4.5e-1140.00Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1[more]
BLAST of CmoCh06G010430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5X1_CUCSA3.1e-3560.77Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1[more]
A0A151TY04_CAJCA1.4e-1939.02Non-specific lipid-transfer protein OS=Cajanus cajan GN=KK1_011210 PE=3 SV=1[more]
A0A061DSH8_THECC6.0e-1838.71Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
V4VXH9_9ROSI3.9e-1746.32Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022824mg PE=3 SV=1[more]
A0A067H3L3_CITSI3.9e-1746.32Non-specific lipid-transfer protein (Fragment) OS=Citrus sinensis GN=CISIN_1g039... [more]
BLAST of CmoCh06G010430 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59320.17.4e-1235.00 lipid transfer protein 3[more]
AT5G59310.11.2e-0932.50 lipid transfer protein 4[more]
AT2G38540.11.7e-0834.15 lipid transfer protein 1[more]
AT3G51590.17.2e-0730.17 lipid transfer protein 12[more]
AT3G51600.17.2e-0729.51 lipid transfer protein 5[more]
BLAST of CmoCh06G010430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074983|ref|XP_008437901.1|1.2e-3563.08PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo][more]
gi|700201296|gb|KGN56429.1|4.5e-3560.77hypothetical protein Csa_3G119620 [Cucumis sativus][more]
gi|778676915|ref|XP_004134304.2|4.5e-3560.77PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus][more]
gi|1012360746|gb|KYP71930.1|2.0e-1939.02putative non-specific lipid-transfer protein 1 [Cajanus cajan][more]
gi|590721283|ref|XP_007051567.1|8.5e-1838.71Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000528Plant_LTP
IPR016140Bifunc_inhib/LTP/seed_store
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0008289 lipid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G010430.1CmoCh06G010430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant lipid transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 100..117
score: 3.3E-9coord: 36..52
score: 3.3E-9coord: 119..130
score: 3.3E-9coord: 83..98
score: 3.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 17..118
score: 9.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 37..128
score: 5.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 36..129
score: 3.97
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 36..129
score: 2.0
NoneNo IPR availablePANTHERPTHR33076FAMILY NOT NAMEDcoord: 1..130
score: 5.3
NoneNo IPR availablePANTHERPTHR33076:SF9SUBFAMILY NOT NAMEDcoord: 1..130
score: 5.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G010430CmaCh00G002890Cucurbita maxima (Rimu)cmacmoB022
CmoCh06G010430CmaCh06G010580Cucurbita maxima (Rimu)cmacmoB831
CmoCh06G010430Cla021161Watermelon (97103) v1cmowmB793
CmoCh06G010430Csa3G119620Cucumber (Chinese Long) v2cmocuB806
CmoCh06G010430ClCG05G000860Watermelon (Charleston Gray)cmowcgB743
CmoCh06G010430CSPI03G07980Wild cucumber (PI 183967)cmocpiB814
CmoCh06G010430Lsi05G021190Bottle gourd (USVL1VR-Ls)cmolsiB758
CmoCh06G010430Cp4.1LG03g16090Cucurbita pepo (Zucchini)cmocpeB787
CmoCh06G010430CsaV3_3G008100Cucumber (Chinese Long) v3cmocucB0953
CmoCh06G010430Cla97C05G081020Watermelon (97103) v2cmowmbB833
CmoCh06G010430Bhi01G000346Wax gourdcmowgoB1013
CmoCh06G010430CsGy3G008120Cucumber (Gy14) v2cgybcmoB401
CmoCh06G010430Carg20891Silver-seed gourdcarcmoB1332
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh06G010430CmoCh14G021690Cucurbita moschata (Rifu)cmocmoB224
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G010430Watermelon (97103) v2cmowmbB810
CmoCh06G010430Watermelon (97103) v2cmowmbB835
CmoCh06G010430Wax gourdcmowgoB1002
CmoCh06G010430Cucumber (Gy14) v1cgycmoB0718
CmoCh06G010430Cucurbita maxima (Rimu)cmacmoB271
CmoCh06G010430Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G010430Melon (DHL92) v3.5.1cmomeB755
CmoCh06G010430Cucurbita pepo (Zucchini)cmocpeB796
CmoCh06G010430Melon (DHL92) v3.6.1cmomedB836
CmoCh06G010430Melon (DHL92) v3.6.1cmomedB857
CmoCh06G010430Silver-seed gourdcarcmoB0171
CmoCh06G010430Cucumber (Chinese Long) v3cmocucB0976