ClCG05G000860.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G000860.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Non-specific lipid-transfer protein
Location	CG_Chr05 : 925667 .. 926029 (+)
Sequence length	363

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGGCGTAGCCTTCGTCGCGGTGTTGGTATGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCGTCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCAAAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACCGACTGCTCAACGTAA

mRNA sequence

ATGGGGGGCGTAGCCTTCGTCGCGGTGTTGGTATGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCGTCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCAAAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACCGACTGCTCAACGTAA

Coding sequence (CDS)

ATGGGGGGCGTAGCCTTCGTCGCGGTGTTGGTATGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCGTCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCAAAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACCGACTGCTCAACGTAA

Protein sequence

MGGVAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCST

Homology

[Close]

BLAST of ClCG05G000860.1 vs. Swiss-Prot
Match: NLTP6_AMBAR (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-15
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 1


Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSL 85
           +C  V   L+PC GF+ G       + PS +CC+GV  L    KTK D+VA+C CIK+  
Sbjct: 29  TCDTVQNILAPCAGFLTG-------QEPSKACCTGVNNLNNSRKTKADRVAVCNCIKELT 88

Query: 86  SMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
             I  YDP R+PL+  +CG+    P +D + DCS
Sbjct: 89  KSIA-YDPKRMPLLSTKCGVKPDFPAVDKNLDCS 114

[Close]

BLAST of ClCG05G000860.1 vs. Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.8e-15
Identity = 42/117 (35.90%), Postives = 60/117 (51.28%), Query Frame = 1


Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           V+ +  L+C +++     E   SC  V+  L PCL ++KG      G  PSP CC GVK+
Sbjct: 6   VSCLVALMCMVVISAPMAEAAISCGTVSGALVPCLTYLKG------GPGPSPQCCGGVKR 65

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCST 121
           L G A+T  D+ A C C+K S   I    P  +  +P +CG+ +    I  ST+C+T
Sbjct: 66  LNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPY-TISTSTNCNT 115

[Close]

BLAST of ClCG05G000860.1 vs. Swiss-Prot
Match: NLT12_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.3e-14
Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 1


Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKS 84
           E+C  V + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+ +
Sbjct: 39  ETCGTVVRALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGLQRVHACECIQTA 98

Query: 85  LSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCST 121
           +      D   +  +PK CGI   ++PPID + DC T
Sbjct: 99  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 130

[Close]

BLAST of ClCG05G000860.1 vs. Swiss-Prot
Match: NLT11_PARJU (Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica GN=PMAI PE=1 SV=3)

HSP 1 Score: 77.8 bits (190), Expect = 9.0e-14
Identity = 37/97 (38.14%), Postives = 53/97 (54.64%), Query Frame = 1


Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKS 84
           E+C  + + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+ +
Sbjct: 2   ETCGTMVRALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGPQRVHACECIQTA 61

Query: 85  LSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCST 121
           +      D   +  +PK CGI   ++PPID + DC T
Sbjct: 62  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 93

[Close]

BLAST of ClCG05G000860.1 vs. Swiss-Prot
Match: NLT13_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.0e-14
Identity = 38/97 (39.18%), Postives = 52/97 (53.61%), Query Frame = 1


Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKS 84
           E+C  V   L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+ +
Sbjct: 38  ETCGTVVGALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGPQRVHACECIQTA 97

Query: 85  LSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCST 121
           +      D   +  +PK CGI   ++PPID + DC T
Sbjct: 98  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 129

[Close]

BLAST of ClCG05G000860.1 vs. TrEMBL
Match: A0A0A0L5X1_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.4e-42
Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 1


Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           +AFVAV  CSLMV LSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK+
Sbjct: 10  LAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVKQ 69

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           L  D KTKKDKVALCEC+KKSLS+IG YDPSRIPLIPK+CG+ +QIPPI NSTDCS
Sbjct: 70  LARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]

BLAST of ClCG05G000860.1 vs. TrEMBL
Match: A0A061DSH8_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao GN=TCM_005159 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.8e-22
Identity = 52/119 (43.70%), Postives = 77/119 (64.71%), Query Frame = 1


Query: 4   VAFVAVLVCSLMVGLSQNED---VESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 63
           + F+A+LV  ++  L+  E      SC  V + ++PCL F+KG     GG +PS +CC G
Sbjct: 5   INFLAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGK----GGADPSQACCDG 64

Query: 64  VKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
            + L  +A+TK D+ A+CEC+K +L  +G YD SR+PLI K+C + I IPPI++ TDCS
Sbjct: 65  ARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCS 119

[Close]

BLAST of ClCG05G000860.1 vs. TrEMBL
Match: I1JRZ7_SOYBN (Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_03G257200 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-21
Identity = 44/94 (46.81%), Postives = 68/94 (72.34%), Query Frame = 1


Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSL 85
           SC  V +E++PC  F++G     G + PS +CC+G+KKL G+A T +++ A+C+C+K+ L
Sbjct: 24  SCATVIEEVAPCTSFLQG-----GSKQPSVACCNGIKKLSGEAGTHQNRTAICQCLKEGL 83

Query: 86  SMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           + IG YDP R+P +PK+CG+   +PPID +TDCS
Sbjct: 84  ATIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCS 112

[Close]

BLAST of ClCG05G000860.1 vs. TrEMBL
Match: A0A0B2RU93_GLYSO (Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-21
Identity = 44/94 (46.81%), Postives = 68/94 (72.34%), Query Frame = 1


Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSL 85
           SC  V +E++PC  F++G     G + PS +CC+G+KKL G+A T +++ A+C+C+K+ L
Sbjct: 24  SCATVIEEVAPCTSFLQG-----GSKQPSVACCNGIKKLSGEAGTHQNRTAICQCLKEGL 83

Query: 86  SMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           + IG YDP R+P +PK+CG+   +PPID +TDCS
Sbjct: 84  ASIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCS 112

[Close]

BLAST of ClCG05G000860.1 vs. TrEMBL
Match: A0A151TY04_CAJCA (Non-specific lipid-transfer protein OS=Cajanus cajan GN=KK1_011210 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-20
Identity = 48/116 (41.38%), Postives = 80/116 (68.97%), Query Frame = 1


Query: 6   FVAVLVCSLMVGLSQNEDVES--CVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 65
           F+A L+  +++ +++ E + S  C  V +E++PC  F++ S      + PS +CCSGVKK
Sbjct: 9   FLAGLLSIVILIITRCEALASVPCSTVIEEVAPCTSFLQEST-----KKPSQACCSGVKK 68

Query: 66  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           + G+  TKKD+  +C+C+K+ L+++G YDP+ IP +PK CG+ +++PPID  TDCS
Sbjct: 69  VSGEGVTKKDRADICQCLKEGLALVGNYDPNLIPQLPKACGLSVKLPPIDKKTDCS 119

[Close]

BLAST of ClCG05G000860.1 vs. TAIR10
Match: AT5G59310.1 (AT5G59310.1 lipid transfer protein 4)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 1


Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSL 85
           +C  VA  LSPCLG++       GG  P P CC+GVKKL G A+T  D+   C C++ + 
Sbjct: 26  TCGTVASSLSPCLGYLSK-----GGVVPPP-CCAGVKKLNGMAQTTPDRQQACRCLQSAA 85

Query: 86  SMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCST 121
             +   +PS    +P +CG+ I   PI  ST+C+T
Sbjct: 86  KGV---NPSLASGLPGKCGVSIPY-PISTSTNCAT 110

[Close]

BLAST of ClCG05G000860.1 vs. TAIR10
Match: AT2G38540.1 (AT2G38540.1 lipid transfer protein 1)

HSP 1 Score: 63.9 bits (154), Expect = 7.6e-11
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 1


Query: 1   MGGVAFVA--VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCC 60
           M GV  +A  +L C ++ G   +    SC  V   L+ C+G++       GG  P P+CC
Sbjct: 1   MAGVMKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQ-----GGVIP-PACC 60

Query: 61  SGVKKLVGDAKTKKDKVALCECIKKSLSMIGP-YDPSRIPLIPKECGIPIQIPPIDNSTD 120
           SGVK L   AKT  D+   C CI+ +   +G   +  R   IPK CG+ I    I  ST+
Sbjct: 61  SGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPY-KISTSTN 116

[Close]

BLAST of ClCG05G000860.1 vs. TAIR10
Match: AT2G15050.1 (AT2G15050.1 lipid transfer protein)

HSP 1 Score: 61.6 bits (148), Expect = 3.8e-10
Identity = 36/97 (37.11%), Postives = 46/97 (47.42%), Query Frame = 1


Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSL 85
           SC  V   L PC G++       G  +P P CC+GV+KL G   T  D+   C CIK + 
Sbjct: 28  SCGEVNSNLKPCTGYLTNG----GITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAA 87

Query: 86  SMIGP-YDPSRIPLIPKECGIPIQI-PPIDNSTDCST 121
             +GP  +  R   IP+ CGI I     I  +T C+T
Sbjct: 88  RNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCNT 120

[Close]

BLAST of ClCG05G000860.1 vs. TAIR10
Match: AT3G08770.2 (AT3G08770.2 lipid transfer protein 6)

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-07
Identity = 35/116 (30.17%), Postives = 53/116 (45.69%), Query Frame = 1


Query: 9   VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDA 68
           +L   L++ L   E   SC  V  +L PCL ++       GG  P+  CC+G+  L   A
Sbjct: 5   LLAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQ-----GGPVPT-LCCNGLTTLKSQA 64

Query: 69  KTKKDKVALCECIKKSLS--MIGPYDPSRIPLIPKECGI--PIQIPPIDNSTDCST 121
           +T  D+  +C CIK ++    + P        +P +CG+  P +  P   STDC +
Sbjct: 65  QTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSP---STDCDS 111

[Close]

BLAST of ClCG05G000860.1 vs. TAIR10
Match: AT3G51600.1 (AT3G51600.1 lipid transfer protein 5)

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07
Identity = 35/113 (30.97%), Postives = 51/113 (45.13%), Query Frame = 1


Query: 9   VLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDA 68
           V+VC L+     +E   SC  V   L  C  ++       GG  P   CCSGV++L   A
Sbjct: 11  VIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTR-----GGFIPR-GCCSGVQRLNSLA 70

Query: 69  KTKKDKVALCECIKKSLSMIGP-YDPSRIPLIPKECGIPIQIPPIDNSTDCST 121
           +T +D+   C CI+ +   +G   +  R   +P  C + I   PI   T+C+T
Sbjct: 71  RTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISY-PISARTNCNT 116

[Close]

BLAST of ClCG05G000860.1 vs. NCBI nr
Match: gi|659074983|ref|XP_008437901.1| (PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo])

HSP 1 Score: 186.4 bits (472), Expect = 2.9e-44
Identity = 91/116 (78.45%), Postives = 100/116 (86.21%), Query Frame = 1


Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           +AFVAVL CSLMV LSQ EDVESCVPVAQ LSPCLGFIKGS        PS SCCSGVK+
Sbjct: 10  LAFVAVLTCSLMVVLSQTEDVESCVPVAQSLSPCLGFIKGSGK------PSASCCSGVKQ 69

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           L G+ KTKKDKVALCECIKKSL+MIGPYDP+RIPLIPK+CGI +QIPPI+NST+CS
Sbjct: 70  LAGNTKTKKDKVALCECIKKSLAMIGPYDPTRIPLIPKQCGISVQIPPINNSTNCS 119

[Close]

BLAST of ClCG05G000860.1 vs. NCBI nr
Match: gi|700201296|gb|KGN56429.1| (hypothetical protein Csa_3G119620 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 1


Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           +AFVAV  CSLMV LSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK+
Sbjct: 10  LAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVKQ 69

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           L  D KTKKDKVALCEC+KKSLS+IG YDPSRIPLIPK+CG+ +QIPPI NSTDCS
Sbjct: 70  LARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]

BLAST of ClCG05G000860.1 vs. NCBI nr
Match: gi|778676915|ref|XP_004134304.2| (PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 1


Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           +AFVAV  CSLMV LSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK+
Sbjct: 10  LAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVKQ 69

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           L  D KTKKDKVALCEC+KKSLS+IG YDPSRIPLIPK+CG+ +QIPPI NSTDCS
Sbjct: 70  LARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]

BLAST of ClCG05G000860.1 vs. NCBI nr
Match: gi|470141935|ref|XP_004306679.1| (PREDICTED: probable non-specific lipid-transfer protein 2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22
Identity = 54/116 (46.55%), Postives = 78/116 (67.24%), Query Frame = 1


Query: 4   VAFVAVLVCSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           V F+A+L+      +S      +C  V ++L+PCL F+KGS      ++PSP+CCSG K+
Sbjct: 5   VTFLAILLF-----VSAAHSAPTCPVVTKKLAPCLPFVKGSS-----KDPSPACCSGAKE 64

Query: 64  LVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
           L  + +T KDK A+C C+KK+LS IG Y PS++ LIPK+CG+ + +PPID  TDCS
Sbjct: 65  LSNNVQTSKDKQAVCMCLKKTLSTIGDYQPSKLSLIPKKCGLKLVLPPIDKKTDCS 110

[Close]

BLAST of ClCG05G000860.1 vs. NCBI nr
Match: gi|590721283|ref|XP_007051567.1| (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 112.8 bits (281), Expect = 4.0e-22
Identity = 52/119 (43.70%), Postives = 77/119 (64.71%), Query Frame = 1


Query: 4   VAFVAVLVCSLMVGLSQNED---VESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 63
           + F+A+LV  ++  L+  E      SC  V + ++PCL F+KG     GG +PS +CC G
Sbjct: 5   INFLAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGK----GGADPSQACCDG 64

Query: 64  VKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS 120
            + L  +A+TK D+ A+CEC+K +L  +G YD SR+PLI K+C + I IPPI++ TDCS
Sbjct: 65  ARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCS 119

The following BLAST results are available for this feature:

BLAST of ClCG05G000860.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLTP6_AMBAR	3.7e-15	41.49	Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1	[more]
NLTP1_LENCU	4.8e-15	35.90	Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1	[more]
NLT12_PARJU	5.3e-14	39.18	Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1	[more]
NLT11_PARJU	9.0e-14	38.14	Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica GN...	[more]
NLT13_PARJU	9.0e-14	39.18	Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1	[more]

BLAST of ClCG05G000860.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5X1_CUCSA	1.4e-42	75.00	Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1	[more]
A0A061DSH8_THECC	2.8e-22	43.70	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
I1JRZ7_SOYBN	1.8e-21	46.81	Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_03G257200 PE=3 SV=1	[more]
A0A0B2RU93_GLYSO	1.8e-21	46.81	Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1	[more]
A0A151TY04_CAJCA	1.5e-20	41.38	Non-specific lipid-transfer protein OS=Cajanus cajan GN=KK1_011210 PE=3 SV=1	[more]

BLAST of ClCG05G000860.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59310.1	1.5e-11	40.00	lipid transfer protein 4	[more]
AT2G38540.1	7.6e-11	35.77	lipid transfer protein 1	[more]
AT2G15050.1	3.8e-10	37.11	lipid transfer protein	[more]
AT3G08770.2	1.3e-07	30.17	lipid transfer protein 6	[more]
AT3G51600.1	3.0e-07	30.97	lipid transfer protein 5	[more]

BLAST of ClCG05G000860.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074983\|ref\|XP_008437901.1\|	2.9e-44	78.45	PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo]	[more]
gi\|700201296\|gb\|KGN56429.1\|	2.1e-42	75.00	hypothetical protein Csa_3G119620 [Cucumis sativus]	[more]
gi\|778676915\|ref\|XP_004134304.2\|	2.1e-42	75.00	PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus]	[more]
gi\|470141935\|ref\|XP_004306679.1\|	1.4e-22	46.55	PREDICTED: probable non-specific lipid-transfer protein 2 [Fragaria vesca subsp....	[more]
gi\|590721283\|ref\|XP_007051567.1\|	4.0e-22	43.70	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000528	Plant_LTP
IPR016140	Bifunc_inhib/LTP/seed_store

Vocabulary: **Biological Process**
Term	Definition
GO:0006869	lipid transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008289	lipid binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG05G000860	ClCG05G000860	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG05G000860.1	ClCG05G000860.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G000860.1.cds1	ClCG05G000860.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 26..42 score: 1.1E-9coord: 109..120 score: 1.1E-9coord: 73..88 score: 1.1E-9coord: 90..107 score: 1.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 9..108 score: 1.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 27..118 score: 2.3
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 26..119 score: 5.29
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 26..120 score: 1.3
None	No IPR available	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 4..120 score: 2.6
None	No IPR available	PANTHER	PTHR33076:SF9	SUBFAMILY NOT NAMED	coord: 4..120 score: 2.6