Carg25695 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25695
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	thioredoxin-like 2, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_341 : 18801 .. 23674 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGTTCACGCGCACACTTTTCTGGAGAATCTAGATACTGCTTTCTATCGACCGCCCTTTGCCTCCATGCTGTTTAGCTAGCTTATCACCCTATTGGGATTTGCTACAAATTTCGTCTTCTTCGTCTCTAAATGGCCGATGTTTCTAGATTCTCGTCCAATTCTTTCTATTTCTCCTCCACTTCTTTGCCACCCTCTTTCGCCTCCTCCTACAATTCTCTTCACCCTTGCCTTCAACCCATTCAAAACCCAGAAAAGAGGTCGACTCCTTTGGCATCTTATTCTGCTACCTGTCTAATGCCTCTTTCTTTCACACCCAGAAAGAGGTTGGTATCTTTCAAGGTACATAACTATTCTTTTCCTCGGATTTCTATTGTATGATTGTTAGTTCTTGGCAATTAACAGGGTTTTTTTATTTATGAATTTAGTTGTACTAGGATACCTACCCCCTAACTATTTGCGCTTTGGCGCTGGCCCGAAGATGTCAGGAAAAATCTGTTTGTTGGGGTTGTTTGAAGTTAATTTTCAATTTGAAGTTTTACGTGCTGAATTGCAATCTGAGCAGATTCCATAAAACCCTAATGGGGAGGCCCATAGACAAAGGTGGATTCTTGTAATGAATTCACCGAGAAGTAAGTTGTACGGCCGACAGTATTGCCGTGGCAATGGAACCAGCTGCTTGTATGGTCTAATCGAACAGTTCAAATTGTCTTCGTATTTCGTGTTTGCATTTTTATTAGTTGAAATTGTTGACTACATTTGCTTGACCAACAATTCTTTCCCATGTGCATTCGATTCTCAGTTGACACTTGTAGTCCGGTATACCAAGTTGTTATATGTTCCAATATAGCCTGATTCTGGTTAAAATTTAGTACCCTTGAGGCACAAAATGATCACAAGTAAATATGGTGCAAGTCCGTTGGGATGGTTCGTGGACAATATGTCTCTGAACGGTAGGATTTTCACTGGCAGCTATGAGATTTATCTGAGATTTGAAGTTTACTTCATGGTTGGGAACCACAGTTAAATTGGATTTTGGAAGGATGCTTGGTTGGATAGGATAACTTTGATCTTCATAATGCTTTTCCTGAACTTTATGCCCACCTGACTCTCATTTCAGATGTTTCTAAAAGGTCTGAACAGAGATAACTTGTGGAGGACCTTACCTTTCAAAGTTCATTCAACGAGAGAGATAACTTGTAGACCTTACATCAAGACAACATGGAAGGTTTTCATATATCTCATCATCTTGATTCAAAATTCTGGAAGTTGGAGAGTTGTTGGAGAGTTCTAGCATCTTTACATGTAAATATTTTTTTGGTTACTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCGTTCCTTAGAAGGGTGTGGAAACCTCTCCCTAATAGATGCATTTTAAAACCGTGAGGCTGACGTTGATACATAACGGGTCAAAGCGGACAATATCTGCTAGTGGTGAACAGATATGTGAATCTCTTTTGATCTCTAGATGGAGGTCCTTTGGCTGAAGAAGTTTGTGATTGCTTCCTTTGTTTTTCATGGAATGTCTACGGAACAACATCTTGTAATTTCGCCATGCCTTCCTGAGGGCAGGAGGATGTACTATTTGTCCATCTTATCCTTTTAGACACGTTTAATTGTTTAAAAAAACTTTTTAGTCAAACAAAATGAATAAGTTAATCATTTTCTCAGTGGCTCCTGTTAATTGTTCTATGATGCCACAGGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTGACTGCACTAAGCGAAGCTGGTGATAGATTAGTTATTGTAGAATTTTATGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGGTAACTTTCTTCATCAGTGCTTTATATTTCTTTAGATTGTGAAGTTGGCCTGCTATTTGCATTTATCGTTGGATAATCAGGACATGCTTTCAGCATTTTCTGAAACTCGATGTAGGACCAGCTTATTGAACTATTAGTCATTAAATGAATGTGTTATAAGAGACAATGACTGCTGGATTTGTTGGCTATCAAGATGAAAAGCTTTAAAATACCCTTTGCTGTACTTTCAAAGGCCTCAAGGTTTTCTAGCTATCTATGTCAATTTGGTTGAAACTACAAACGATTGCTCGATCCTTTAAAACTTTGCTAATCAAGAACTCTTCTGAATATTTGATATCCGAAGAACCTAGTCTGAAGATACTCTAGATATATGATCCTGTGATCCACTTGTTTGAGCCTGAAGGGACGGCCAGTTCTTCAATTCATTGGATTACATGTTTGCCACATTTAGTTGAAGAATTGCAGAATTTCTAGAAAACTGCTCATATGAAGCGACTGGATTAACGTAACAGCCCAAGCTTGAAAGGGGAACGAAACATTCCTTATAATATAAGGTGTGGAAACCTCTCCCTATCGGACTCGTTTTAAAACCTTGAGGGAAAGCCCAAATAGGGGAATATCTGCTAGCGGTGGGGTTAAGCTATTACAAATGATATCTGAGTCAAACACTGGGCGGTATTGCCAATGAGACATTGGGCCCCCAAGGGGGGTGGATTGTGAGATCACACATCAGTTGGAGAGGGGAACAAAGCATTTCTTATAAGGGTGTGGAAACCTCTCCCTATCGGATGCATTTTAAAACCTTGAGGGCAAGTCTGGAAGGAAAAGTCCAAAGAGGACCATATCTGGTAGTGGTGGGGTTGTATGCTAGTTGGTCCTTAGATGTGGAAGAGAAAGGTGTGTGTTTCGAATATATCCCAAGGTAGAGGCATAGTATCTGGGAAAATTTAGTAGTTTGATCAAGGAAGCGTGTTTTCTTTTTATTGTCCTCTTTATTGATTTTCTGCTGCAGCAGCAGTTCAGGCATTATCTATCGCTGAGTTTATAACGAGAAAGCTCCATAACACTTCTTATTTGCACGGTTGTTTCTTACATTAAATGATTGTGTTATTCATTGGATTTAATATTTGTTGTTTCTCAACTTATCATACTTTGTACTTTCCTGTTTCATGGTCTGACGATTTGTATATGCGTTGAAATGGAACTGTCAGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTTAATTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGAGCTGATGGACAGTTGGAGTCCTTCTCATGCTCACTCGCAAAGGTTAGTATCCTCCTTTCCCTCCCCACCTCCAATATGTCAATTCATTCTATTTTCTTGGGTTAGCTTATAATGAGCAGAATGTTAAAATTTCGAGTCACAGATGTGAATTTGATAGAAGGATTGATTTGAAAACTATATTAAGTTGTTGATCTTATGGCAAGTAGTGATATTTTTCCTAGAACTTTCATGAAATGATCATATAAGTAAATATTTTCAGAATTTGAACTCTATCTAACCTTTCTCCTTCCCGCAGTTTCAGAAAATTAAAGATGCAATTGAAATGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAAGGGAGTAGGAGATCTTATACTGTAGCCCTCCTTGGCTCCCAGGACGAACACTTGCTGCAAATCCACATCGGTATCATTGTGCATTCCCCTGGTATTAATATAACCTTCTTGTTTAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATTCTGCAGTCAGCTATCCAATCTGTAAATTTGCATTCTTGTTCTGTAAAAGAATTCAGAAGTTGAGAATACCAATCATAAAATATTTTGCTTGCCAAAGTAGTAGCAGTAGCACCGTTTGTTCTAGCAACAGTCGAAAGCTACTTTTTGTGTGCATTGAATAATAAATTTAGTCACTAGTTTCTGATGAACATCATGCTCATTCCATCTCTCAGCTTTCAAGTGTTTTAGTTACATTTCTTTCAATTTTGATTCCAATTCTTCTCCTGCACCTGAAAAGAACAGAACACAACAATTCAAGTGAAGTGACAACTAACAAGGTCACTTCACTTACTTCACTCAACCAATTAGAAATACAAAACCCCATTTTGTGTGGCAATAACCATAAAGATCACAGAAGCTGCATGGGAGCAGATTTTCAGGGAGTGGCTCAAGAAAATGGATATTAAAGGCACTCAAATCGTAATCCTCACCTCAAAACATAAACACCCACCAGTACTGTTAGTATAATTTCCCAAGTGGAACATGTCAGGAATCTTCCATCTCCGCTCGACCATCGGGGCCCTGGCATTTGTTGCAATCTTCACATGCTCCCAGATGGTCACTCTGTCTCAGAGTGCCGACGTGGAAGCTTGCATACCGGTGGTGCAGGAGTTATCACCATGCTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGCGGCGAGAATCCATCACCATCGTGCTGCACCGGCGTTGGAAAGTTGGTCGACGATGCTAAAACGAAGAAACATAGGGTAGATTTGTGTGAGTGCATCAAGACGAGTTTGTCGATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCGGAAGATTGTGGAATTCCCGCCCAAATTCCCCCCATCGACAGTTCTACCGACTGCTCGAAGTAAATCACAATTCATCATTTGTTTTTGTATTGAATTTTCTTAACAAAACATTAGGTGTTTGTGAGCTAAGATTTTTGGTGTTCGTGTGTCGGCATGCAGGGCTGAGGACTATCAATTTGGAAGTGCTTTTTCATACGAGCTTGAGGACAACCATAATCATTGA

mRNA sequence

CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGTTCACGCGCACACTTTTCTGGAGAATCTAGATACTGCTTTCTATCGACCGCCCTTTGCCTCCATGCTGTTTAGCTAGCTTATCACCCTATTGGGATTTGCTACAAATTTCGTCTTCTTCGTCTCTAAATGGCCGATGTTTCTAGATTCTCGTCCAATTCTTTCTATTTCTCCTCCACTTCTTTGCCACCCTCTTTCGCCTCCTCCTACAATTCTCTTCACCCTTGCCTTCAACCCATTCAAAACCCAGAAAAGAGGTCGACTCCTTTGGCATCTTATTCTGCTACCTGTCTAATGCCTCTTTCTTTCACACCCAGAAAGAGGTTGGTATCTTTCAAGATGGAGGTCCTTTGGCTGAAGAAGTTTGTGATTGCTTCCTTTGTTTTTCATGGAATGTCTACGGAACAACATCTTGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTGACTGCACTAAGCGAAGCTGGTGATAGATTAGTTATTGTAGAATTTTATGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTTAATTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGAGCTGATGGACAGTTGGAGTCCTTCTCATGCTCACTCGCAAAGCATTGGGCCGCCAAAGGGAGTAGGAGATCTTATACTGTAGCCCTCCTTGGCTCCCAGGACGAACACTTGCTGCAAATCCACATCGGTATCATTGTGCATTCCCCTGGAATCTTCCATCTCCGCTCGACCATCGGGGCCCTGGCATTTGTTGCAATCTTCACATGCTCCCAGATGGTCACTCTGTCTCAGAGTGCCGACGTGGAAGCTTGCATACCGGTGGTGCAGGAGTTATCACCATGCTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGCGGCGAGAATCCATCACCATCGTGCTGCACCGGCGTTGGAAAGTTGGTCGACGATGCTAAAACGAAGAAACATAGGGTAGATTTGTGTGAGTGCATCAAGACGAGTTTGTCGATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCGGAAGATTGTGGAATTCCCGCCCAAATTCCCCCCATCGACAGTTCTACCGACTGCTCGAAGGCTGAGGACTATCAATTTGGAAGTGCTTTTTCATACGAGCTTGAGGACAACCATAATCATTGA

Coding sequence (CDS)

ATGGCCGATGTTTCTAGATTCTCGTCCAATTCTTTCTATTTCTCCTCCACTTCTTTGCCACCCTCTTTCGCCTCCTCCTACAATTCTCTTCACCCTTGCCTTCAACCCATTCAAAACCCAGAAAAGAGGTCGACTCCTTTGGCATCTTATTCTGCTACCTGTCTAATGCCTCTTTCTTTCACACCCAGAAAGAGGTTGGTATCTTTCAAGATGGAGGTCCTTTGGCTGAAGAAGTTTGTGATTGCTTCCTTTGTTTTTCATGGAATGTCTACGGAACAACATCTTGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTGACTGCACTAAGCGAAGCTGGTGATAGATTAGTTATTGTAGAATTTTATGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTTAATTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGAGCTGATGGACAGTTGGAGTCCTTCTCATGCTCACTCGCAAAGCATTGGGCCGCCAAAGGGAGTAGGAGATCTTATACTGTAGCCCTCCTTGGCTCCCAGGACGAACACTTGCTGCAAATCCACATCGGTATCATTGTGCATTCCCCTGGAATCTTCCATCTCCGCTCGACCATCGGGGCCCTGGCATTTGTTGCAATCTTCACATGCTCCCAGATGGTCACTCTGTCTCAGAGTGCCGACGTGGAAGCTTGCATACCGGTGGTGCAGGAGTTATCACCATGCTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGCGGCGAGAATCCATCACCATCGTGCTGCACCGGCGTTGGAAAGTTGGTCGACGATGCTAAAACGAAGAAACATAGGGTAGATTTGTGTGAGTGCATCAAGACGAGTTTGTCGATGATCGGACCTTATGATCCGAGTCGCATCCCTTTGATTCCGGAAGATTGTGGAATTCCCGCCCAAATTCCCCCCATCGACAGTTCTACCGACTGCTCGAAGGCTGAGGACTATCAATTTGGAAGTGCTTTTTCATACGAGCTTGAGGACAACCATAATCATTGA

Protein sequence

MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSFTPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKHWAAKGSRRSYTVALLGSQDEHLLQIHIGIIVHSPGIFHLRSTIGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTGVGKLVDDAKTKKHRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCSKAEDYQFGSAFSYELEDNHNH

Homology

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BLAST of Carg25695 vs. NCBI nr
Match: XP_022924452.1 (thioredoxin-like 2, chloroplastic [Cucurbita moschata] >XP_023526881.1 thioredoxin-like 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.8 bits (948), Expect = 1.2e-98
Identity = 187/224 (83.48%), Postives = 189/224 (84.38%), Query Frame = 0


Query: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60
           MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF
Sbjct: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60

Query: 61  TPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEKNAPNMIDIH 120
           TPRKRLVSFK                         VQAAVAEKDQPKWWEKNAPNMIDIH
Sbjct: 61  TPRKRLVSFK-------------------------VQAAVAEKDQPKWWEKNAPNMIDIH 120

Query: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180
           STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC
Sbjct: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180

Query: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKHWAAKGSRRSYTVA 225
           KSLNVKVLPYFHFYRGADGQLESFSCSLAK    K +   +  A
Sbjct: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTA 199

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BLAST of Carg25695 vs. NCBI nr
Match: XP_022980044.1 (thioredoxin-like 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 363.2 bits (931), Expect = 1.1e-96
Identity = 184/224 (82.14%), Postives = 187/224 (83.48%), Query Frame = 0


Query: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60
           MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQ IQNPEKRSTPLASYSATC+MPLSF
Sbjct: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQSIQNPEKRSTPLASYSATCVMPLSF 60

Query: 61  TPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEKNAPNMIDIH 120
            PRKRLVSFK                         VQAAVAEKDQPKWWEKNAPNMIDIH
Sbjct: 61  RPRKRLVSFK-------------------------VQAAVAEKDQPKWWEKNAPNMIDIH 120

Query: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180
           STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC
Sbjct: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180

Query: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKHWAAKGSRRSYTVA 225
           KSLNVKVLPYFHFYRGADGQLESFSCSLAK    K +   +  A
Sbjct: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTA 199

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BLAST of Carg25695 vs. NCBI nr
Match: XP_004133814.1 (PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis sativus] >KGN56427.1 hypothetical protein Csa_3G119600 [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 8.4e-89
Identity = 172/224 (76.79%), Postives = 180/224 (80.36%), Query Frame = 0


Query: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60
           MADV RFSS+SFYFSSTSLPPSFASSY+SLHP L  IQNPEKRS+P+  YS + +MPLSF
Sbjct: 1   MADVFRFSSHSFYFSSTSLPPSFASSYSSLHPSLPSIQNPEKRSSPMPCYSTSHVMPLSF 60

Query: 61  TPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEKNAPNMIDIH 120
            PRKRLVSFK                         VQAAVAEKDQPKWWEKNAPNMIDIH
Sbjct: 61  RPRKRLVSFK-------------------------VQAAVAEKDQPKWWEKNAPNMIDIH 120

Query: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180
           STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC
Sbjct: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180

Query: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKHWAAKGSRRSYTVA 225
           KSLNVKVLPYFHFYRGADGQLESFSCSLAK    K +   +  A
Sbjct: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTA 199

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BLAST of Carg25695 vs. NCBI nr
Match: XP_008437900.1 (PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 1.1e-88
Identity = 172/224 (76.79%), Postives = 179/224 (79.91%), Query Frame = 0


Query: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60
           MADV RFSS+SFYFSSTSLPPSFASSY+SLHP L  IQNPEKRS+P+  YS +  MPLSF
Sbjct: 1   MADVFRFSSHSFYFSSTSLPPSFASSYSSLHPSLPSIQNPEKRSSPMPCYSTSYAMPLSF 60

Query: 61  TPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEKNAPNMIDIH 120
            PRKRLVSFK                         VQAAVAEKDQPKWWEKNAPNMIDIH
Sbjct: 61  RPRKRLVSFK-------------------------VQAAVAEKDQPKWWEKNAPNMIDIH 120

Query: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180
           STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC
Sbjct: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180

Query: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKHWAAKGSRRSYTVA 225
           KSLNVKVLPYFHFYRGADGQLESFSCSLAK    K +   +  A
Sbjct: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTA 199

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BLAST of Carg25695 vs. NCBI nr
Match: XP_023540945.1 (thioredoxin-like 2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023540946.1 thioredoxin-like 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 4.5e-82
Identity = 162/224 (72.32%), Postives = 174/224 (77.68%), Query Frame = 0


Query: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60
           MADV RFSS+SF F STS P SFASS NS+  CL PIQ+ +KRST L  YS + +MPLSF
Sbjct: 1   MADVFRFSSHSFCFPSTSFPASFASSCNSIQTCLPPIQSSDKRSTSLLRYSTSFVMPLSF 60

Query: 61  TPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEKNAPNMIDIH 120
           TPRKRLVSFK                         VQAAVAEKDQPKWWEK+APNMIDIH
Sbjct: 61  TPRKRLVSFK-------------------------VQAAVAEKDQPKWWEKSAPNMIDIH 120

Query: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180
           STQEFLTALSE+GDRLVIV+FYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENK MC
Sbjct: 121 STQEFLTALSESGDRLVIVDFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKQMC 180

Query: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKHWAAKGSRRSYTVA 225
           KSLNVKVLPYFHFYRGADGQLESFSCSLAK    K + + +  A
Sbjct: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIKMHNTA 199

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BLAST of Carg25695 vs. TAIR10
Match: AT4G29670.2 (atypical CYS HIS rich thioredoxin 2)

HSP 1 Score: 217.6 bits (553), Expect = 1.3e-56
Identity = 124/219 (56.62%), Postives = 148/219 (67.58%), Query Frame = 0


Query: 1   MADVSRFSSNSFY-FSSTSLPPSFASSYNSLHPCLQPIQ--NPEKRSTPLASYSATCLMP 60
           MA V R ++ S      +S   SFA++ N L PCL P    N +KR   L+S S +C   
Sbjct: 1   MAGVVRLTTTSVQAIRVSSSFSSFATALNPLQPCLPPNSNLNSDKRLRLLSS-SPSC-SS 60

Query: 61  LSFTPRKRLVSF------KMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEK 120
             + P   L S       K +V+ +K                  V   VAE + PKWWE+
Sbjct: 61  SHYHPSSGLGSHLPLRRPKSQVVRVK------------------VDENVAETEPPKWWER 120

Query: 121 NAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKV 180
           NAPNM+DIHST+EFL+ALS AG+RLVIVEFYGTWCASCRALFP+LC+TA EHP+I+FLKV
Sbjct: 121 NAPNMVDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKV 180

Query: 181 NFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAK 211
           NFDENKPMCKSLNV+VLP+FHFYRGADGQLESFSCSLAK
Sbjct: 181 NFDENKPMCKSLNVRVLPFFHFYRGADGQLESFSCSLAK 199

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BLAST of Carg25695 vs. TAIR10
Match: AT4G26160.1 (atypical CYS HIS rich thioredoxin 1)

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-52
Identity = 92/116 (79.31%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 96  VQAAVAEKDQPKWWEKNA-PNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFP 155
           VQA  AE +QPKWWE+ A PNMIDI S ++FL AL +AGDRLVIV+FYGTWC SCRA+FP
Sbjct: 74  VQALAAETEQPKWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFP 133

Query: 156 RLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAK 211
           +LC+TA EHP ILFLKVNFDENK +CKSLNVKVLPYFHFYRGADGQ+ESFSCSLAK
Sbjct: 134 KLCKTAKEHPNILFLKVNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLAK 189

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BLAST of Carg25695 vs. TAIR10
Match: AT2G33270.1 (atypical CYS HIS rich thioredoxin 3)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-28
Identity = 64/171 (37.43%), Postives = 103/171 (60.23%), Query Frame = 0


Query: 45  TPLASYSATCLMPL-----SFTPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAA 104
           +P +  S  C+ P       F+PR  +      +L+ KK  I +FV           Q +
Sbjct: 28  SPKSISSLCCISPRLISCNHFSPRTLISGENGNILFSKK-KIPAFV---------RCQTS 87

Query: 105 VAEKDQPKWWEKN-APNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCR 164
           +      KWWEK   PNM  + S Q+ + +L  AGD+LV+V+F+   C  C+AL P++C+
Sbjct: 88  LGIGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICK 147

Query: 165 TADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLA 210
            A+++PE+ FL+VN++E++ +C+SLN+ VLP+F FYRG+ G++ SFSC+ A
Sbjct: 148 IAEKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNA 188

[Close]

BLAST of Carg25695 vs. TAIR10
Match: AT1G08570.1 (atypical CYS HIS rich thioredoxin 4)

HSP 1 Score: 122.1 bits (305), Expect = 7.7e-28
Identity = 52/104 (50.00%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 107 KWWEKN-APNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPE 166
           KWWEK    NM +I S QE + +L+ AGD+LV+V+F+   C  C+AL P++C+ A+ +P+
Sbjct: 89  KWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPD 148

Query: 167 ILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLA 210
           + FL+VN++E+K MC SL V VLP+F FYRG+ G++ SFSC+ A
Sbjct: 149 VQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNA 192

[Close]

BLAST of Carg25695 vs. TAIR10
Match: AT5G61440.1 (atypical CYS HIS rich thioredoxin 5)

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-27
Identity = 50/104 (48.08%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 107 KWWEKNA-PNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPE 166
           +WWEK+   NM++I S    + +L  AGDRLV+++FY   C  C++L P++C+ A+ +P 
Sbjct: 77  RWWEKSTNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLAETNPN 136

Query: 167 ILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLA 210
           ++FLKVN +E + MC  LNV VLP+F FYRGA+G++ SFSC++A
Sbjct: 137 VMFLKVNQEELRTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIA 180

[Close]

BLAST of Carg25695 vs. Swiss-Prot
Match: sp|Q8LCT3|TRL22_ARATH (Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29670 PE=2 SV=2)

HSP 1 Score: 217.6 bits (553), Expect = 2.4e-55
Identity = 124/219 (56.62%), Postives = 148/219 (67.58%), Query Frame = 0


Query: 1   MADVSRFSSNSFY-FSSTSLPPSFASSYNSLHPCLQPIQ--NPEKRSTPLASYSATCLMP 60
           MA V R ++ S      +S   SFA++ N L PCL P    N +KR   L+S S +C   
Sbjct: 1   MAGVVRLTTTSVQAIRVSSSFSSFATALNPLQPCLPPNSNLNSDKRLRLLSS-SPSC-SS 60

Query: 61  LSFTPRKRLVSF------KMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEK 120
             + P   L S       K +V+ +K                  V   VAE + PKWWE+
Sbjct: 61  SHYHPSSGLGSHLPLRRPKSQVVRVK------------------VDENVAETEPPKWWER 120

Query: 121 NAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKV 180
           NAPNM+DIHST+EFL+ALS AG+RLVIVEFYGTWCASCRALFP+LC+TA EHP+I+FLKV
Sbjct: 121 NAPNMVDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKV 180

Query: 181 NFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAK 211
           NFDENKPMCKSLNV+VLP+FHFYRGADGQLESFSCSLAK
Sbjct: 181 NFDENKPMCKSLNVRVLPFFHFYRGADGQLESFSCSLAK 199

[Close]

BLAST of Carg25695 vs. Swiss-Prot
Match: sp|Q5TKD8|TRL2_ORYSJ (Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0200100 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.1e-54
Identity = 101/115 (87.83%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 98  AAVAEK-DQPKWWEKNA-PNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPR 157
           AAV++K +QPKWWEKNA PNMIDIHSTQEFL AL +AGDRLVIVEFYGTWC SCRALFPR
Sbjct: 61  AAVSDKSEQPKWWEKNAGPNMIDIHSTQEFLDALRDAGDRLVIVEFYGTWCGSCRALFPR 120

Query: 158 LCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAK 211
           LCRTA E+P+ILFLKVNFDENKPMCK LNVKVLPYFHFYRGADGQLE+FSCSLAK
Sbjct: 121 LCRTAVENPDILFLKVNFDENKPMCKRLNVKVLPYFHFYRGADGQLEAFSCSLAK 175

[Close]

BLAST of Carg25695 vs. Swiss-Prot
Match: sp|Q8LEK4|TRL21_ARATH (Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g26160 PE=2 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 2.1e-51
Identity = 92/116 (79.31%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 96  VQAAVAEKDQPKWWEKNA-PNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFP 155
           VQA  AE +QPKWWE+ A PNMIDI S ++FL AL +AGDRLVIV+FYGTWC SCRA+FP
Sbjct: 74  VQALAAETEQPKWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFP 133

Query: 156 RLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAK 211
           +LC+TA EHP ILFLKVNFDENK +CKSLNVKVLPYFHFYRGADGQ+ESFSCSLAK
Sbjct: 134 KLCKTAKEHPNILFLKVNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLAK 189

[Close]

BLAST of Carg25695 vs. Swiss-Prot
Match: sp|Q10M18|TRL12_ORYSJ (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.6e-30
Identity = 67/153 (43.79%), Postives = 96/153 (62.75%), Query Frame = 0


Query: 96  VQAAVAEKDQPKWWEKN-APNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFP 155
           VQ  +A     KWWEK   PNM ++ S Q+ + +L+ AGD LVIV+F+   C  CRAL P
Sbjct: 75  VQMNLAFAKATKWWEKGLQPNMREVESAQDLVDSLTNAGDNLVIVDFFSPGCGGCRALHP 134

Query: 156 RLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSC-------- 215
           ++C+ A+++P++LFL+VN++E+K MC SL+V VLP+F FYRGA G+L SFSC        
Sbjct: 135 KICQIAEQNPDVLFLQVNYEEHKSMCYSLHVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 194

Query: 216 --SLAKH-------WAAKGSRRSYTVALLGSQD 231
             +LAKH          +G   S  +AL  ++D
Sbjct: 195 RDALAKHKPDRCSLGPTRGLEESELLALAANKD 227

[Close]

BLAST of Carg25695 vs. Swiss-Prot
Match: sp|Q6Z4N3|TRL11_ORYSJ (Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0684100 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 9.6e-28
Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 0


Query: 107 KWWEK-NAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPE 166
           +WWEK   PNM +I S Q+   +L  AGD+LV+V+F+   C  CRAL P++ + A+++PE
Sbjct: 85  RWWEKCLQPNMREIESAQDLADSLLNAGDKLVVVDFFSPGCGGCRALHPKIAQLAEKNPE 144

Query: 167 ILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSC----------SLAKH---- 226
           +LFL+VN++++K MC SL+V VLP+F FYRGA G++ SFSC          +LAKH    
Sbjct: 145 VLFLQVNYEKHKSMCYSLHVHVLPFFRFYRGAQGRVSSFSCTNATIKKFKDALAKHGPDR 204

Query: 227 ---WAAKGSRRSYTVALLGSQD 231
                AKG   S  +AL  ++D
Sbjct: 205 CGLGPAKGLEESELMALAINRD 226

[Close]

BLAST of Carg25695 vs. TrEMBL
Match: tr|A0A0A0L760|A0A0A0L760_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119600 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.5e-89
Identity = 172/224 (76.79%), Postives = 180/224 (80.36%), Query Frame = 0


Query: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60
           MADV RFSS+SFYFSSTSLPPSFASSY+SLHP L  IQNPEKRS+P+  YS + +MPLSF
Sbjct: 1   MADVFRFSSHSFYFSSTSLPPSFASSYSSLHPSLPSIQNPEKRSSPMPCYSTSHVMPLSF 60

Query: 61  TPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEKNAPNMIDIH 120
            PRKRLVSFK                         VQAAVAEKDQPKWWEKNAPNMIDIH
Sbjct: 61  RPRKRLVSFK-------------------------VQAAVAEKDQPKWWEKNAPNMIDIH 120

Query: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180
           STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC
Sbjct: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180

Query: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKHWAAKGSRRSYTVA 225
           KSLNVKVLPYFHFYRGADGQLESFSCSLAK    K +   +  A
Sbjct: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTA 199

[Close]

BLAST of Carg25695 vs. TrEMBL
Match: tr|A0A1S3AV76|A0A1S3AV76_CUCME (thioredoxin-like 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483190 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.2e-89
Identity = 172/224 (76.79%), Postives = 179/224 (79.91%), Query Frame = 0


Query: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60
           MADV RFSS+SFYFSSTSLPPSFASSY+SLHP L  IQNPEKRS+P+  YS +  MPLSF
Sbjct: 1   MADVFRFSSHSFYFSSTSLPPSFASSYSSLHPSLPSIQNPEKRSSPMPCYSTSYAMPLSF 60

Query: 61  TPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEKNAPNMIDIH 120
            PRKRLVSFK                         VQAAVAEKDQPKWWEKNAPNMIDIH
Sbjct: 61  RPRKRLVSFK-------------------------VQAAVAEKDQPKWWEKNAPNMIDIH 120

Query: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180
           STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC
Sbjct: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180

Query: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKHWAAKGSRRSYTVA 225
           KSLNVKVLPYFHFYRGADGQLESFSCSLAK    K +   +  A
Sbjct: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTA 199

[Close]

BLAST of Carg25695 vs. TrEMBL
Match: tr|A0A2P4IMZ5|A0A2P4IMZ5_QUESU (Isoform 2 of thioredoxin-like 2-2, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_29433 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 9.8e-70
Identity = 145/227 (63.88%), Postives = 167/227 (73.57%), Query Frame = 0


Query: 1   MADVSRFSSNSFYF-SSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPL--ASYSATCLMP 60
           MADV RFS +S  F SS+SL  SFASS NSL P L PI N +KR  PL  +S SA     
Sbjct: 1   MADVIRFSFHSLRFSSSSSLVTSFASSLNSLQPGLPPIPNSDKRVYPLLYSSSSAGDFAR 60

Query: 61  LSFTPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEKNAPNMI 120
            +FTPRK+LVS K                         V+A V E DQPKWWE+NAPNM+
Sbjct: 61  FAFTPRKQLVSLK-------------------------VRATVTETDQPKWWERNAPNMV 120

Query: 121 DIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENK 180
           DIHSTQEFL+ALS+AG+RLVIVEFYGTWCASCRALFP+LCRTA+EHPEILFLK+NFDENK
Sbjct: 121 DIHSTQEFLSALSQAGERLVIVEFYGTWCASCRALFPKLCRTAEEHPEILFLKINFDENK 180

Query: 181 PMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKHWAAKGSRRSYTVA 225
           PMCKS+NVKVLPYFHFYRGADGQLE+FSCSLAK    K + ++++ A
Sbjct: 181 PMCKSMNVKVLPYFHFYRGADGQLEAFSCSLAKFQKIKDAIQTHSTA 202

[Close]

BLAST of Carg25695 vs. TrEMBL
Match: tr|A0A2I4GPQ6|A0A2I4GPQ6_9ROSI (thioredoxin-like 2, chloroplastic OS=Juglans regia OX=51240 GN=LOC109009734 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.7e-69
Identity = 146/224 (65.18%), Postives = 162/224 (72.32%), Query Frame = 0


Query: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60
           MADV R S +SF F S SL  SFASS+NSL P LQPIQN +KR   L   SA      SF
Sbjct: 1   MADVIRLSFHSFRF-SPSLLTSFASSFNSLQPGLQPIQNSDKRVCSLLYSSAGDYARFSF 60

Query: 61  TPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEKNAPNMIDIH 120
            PRK+ VSF+                         V+A VAE DQPKWWEKNAPNM+DIH
Sbjct: 61  RPRKQSVSFQ-------------------------VRATVAETDQPKWWEKNAPNMVDIH 120

Query: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180
           STQEFL+ALS+A +RLVIVEFYGTWCASCRALFP+LCRTA+EHPEILFLKVNFDENKPMC
Sbjct: 121 STQEFLSALSQAEERLVIVEFYGTWCASCRALFPKLCRTAEEHPEILFLKVNFDENKPMC 180

Query: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAKHWAAKGSRRSYTVA 225
           KS+NVKVLPYFHFYRGADGQLESFSCSLAK    K +  ++  A
Sbjct: 181 KSMNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAILTHNTA 198

[Close]

BLAST of Carg25695 vs. TrEMBL
Match: tr|A0A2I4GYN4|A0A2I4GYN4_9ROSI (thioredoxin-like 2, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=LOC109012026 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 6.6e-66
Identity = 143/210 (68.10%), Postives = 152/210 (72.38%), Query Frame = 0


Query: 1   MADVSRFSSNSFYFSSTSLPPSFASSYNSLHPCLQPIQNPEKRSTPLASYSATCLMPLSF 60
           MADV R S +S  FSS SL  SFASS NSL P L  IQ  +KR  PL   SA  L    F
Sbjct: 1   MADVVRLSFHSLRFSS-SLLNSFASSLNSLRPGLLSIQKTDKRVYPLLYSSAGDLTRFDF 60

Query: 61  TPRKRLVSFKMEVLWLKKFVIASFVFHGMSTEQHLVQAAVAEKDQPKWWEKNAPNMIDIH 120
            PRK+ VSFK                         V A VAE DQPKWWEKNAPNM+DIH
Sbjct: 61  RPRKQPVSFK-------------------------VHATVAETDQPKWWEKNAPNMVDIH 120

Query: 121 STQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMC 180
           STQEFL+ALS+AGDRLVIVEFYGTWCASCRALFP+L RTA+E PEI+FLKVNFDENKPMC
Sbjct: 121 STQEFLSALSQAGDRLVIVEFYGTWCASCRALFPKLRRTAEELPEIVFLKVNFDENKPMC 180

Query: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAK 211
           KSLNVKVLPYFHFYRGADGQLESFSCSLAK
Sbjct: 181 KSLNVKVLPYFHFYRGADGQLESFSCSLAK 184

The following BLAST results are available for this feature:

BLAST of Carg25695 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924452.1	1.2e-98	83.48	thioredoxin-like 2, chloroplastic [Cucurbita moschata] >XP_023526881.1 thioredox...	[more]
XP_022980044.1	1.1e-96	82.14	thioredoxin-like 2, chloroplastic [Cucurbita maxima]	[more]
XP_004133814.1	8.4e-89	76.79	PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis sativus] >KGN56427.1 hypot...	[more]
XP_008437900.1	1.1e-88	76.79	PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis melo]	[more]
XP_023540945.1	4.5e-82	72.32	thioredoxin-like 2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023540946.1 t...	[more]

BLAST of Carg25695 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G29670.2	1.3e-56	56.62	atypical CYS HIS rich thioredoxin 2	[more]
AT4G26160.1	1.2e-52	79.31	atypical CYS HIS rich thioredoxin 1	[more]
AT2G33270.1	1.2e-28	37.43	atypical CYS HIS rich thioredoxin 3	[more]
AT1G08570.1	7.7e-28	50.00	atypical CYS HIS rich thioredoxin 4	[more]
AT5G61440.1	1.0e-27	48.08	atypical CYS HIS rich thioredoxin 5	[more]

BLAST of Carg25695 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LCT3\|TRL22_ARATH	2.4e-55	56.62	Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29670...	[more]
sp\|Q5TKD8\|TRL2_ORYSJ	2.1e-54	87.83	Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os...	[more]
sp\|Q8LEK4\|TRL21_ARATH	2.1e-51	79.31	Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g26160...	[more]
sp\|Q10M18\|TRL12_ORYSJ	4.6e-30	43.79	Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
sp\|Q6Z4N3\|TRL11_ORYSJ	9.6e-28	44.37	Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]

BLAST of Carg25695 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L760\|A0A0A0L760_CUCSA	5.5e-89	76.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119600 PE=4 SV=1	[more]
tr\|A0A1S3AV76\|A0A1S3AV76_CUCME	7.2e-89	76.79	thioredoxin-like 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483190 PE=4 S...	[more]
tr\|A0A2P4IMZ5\|A0A2P4IMZ5_QUESU	9.8e-70	63.88	Isoform 2 of thioredoxin-like 2-2, chloroplastic OS=Quercus suber OX=58331 GN=CF...	[more]
tr\|A0A2I4GPQ6\|A0A2I4GPQ6_9ROSI	1.7e-69	65.18	thioredoxin-like 2, chloroplastic OS=Juglans regia OX=51240 GN=LOC109009734 PE=4...	[more]
tr\|A0A2I4GYN4\|A0A2I4GYN4_9ROSI	6.6e-66	68.10	thioredoxin-like 2, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=LOC109...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis
GO:0006869	lipid transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR036312	Bifun_inhib/LTP/seed_sf
IPR017937	Thioredoxin_CS
IPR013766	Thioredoxin_domain
IPR016140	Bifunc_inhib/LTP/seed_store
IPR000528	Plant_LTP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008289	lipid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25695-RA	Carg25695-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 326..341 score: 29.13 coord: 343..360 score: 20.68 coord: 279..295 score: 32.67 coord: 362..373 score: 41.54
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 280..371 e-value: 3.3E-7 score: 39.9
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 97..210 e-value: 4.1E-21 score: 76.9
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 278..375 e-value: 4.6E-20 score: 73.6
None	No IPR available	PANTHER	PTHR43601	FAMILY NOT NAMED	coord: 21..224
None	No IPR available	PANTHER	PTHR43601:SF10	THIOREDOXIN-LIKE 2-1, CHLOROPLASTIC-RELATED	coord: 21..224
None	No IPR available	CDD	cd01960	nsLTP1	coord: 280..372 e-value: 1.47876E-23 score: 92.4129
None	No IPR available	CDD	cd02947	TRX_family	coord: 123..201 e-value: 6.03393E-19 score: 79.9096
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 120..198 e-value: 1.6E-16 score: 60.0
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 94..262 score: 10.695
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 138..156
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 280..373
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 101..197

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25695	Cla021159	Watermelon (97103) v1	carwmB0122
Carg25695	Csa3G119600	Cucumber (Chinese Long) v2	carcuB0132
Carg25695	MELO3C006026	Melon (DHL92) v3.5.1	carmeB0128
Carg25695	ClCG05G000840	Watermelon (Charleston Gray)	carwcgB0122
Carg25695	CSPI03G07960	Wild cucumber (PI 183967)	carcpiB0137
Carg25695	Cucsa.259200	Cucumber (Gy14) v1	carcgyB0148
Carg25695	CmaCh14G021060	Cucurbita maxima (Rimu)	carcmaB0162
Carg25695	CmaCh00G002890	Cucurbita maxima (Rimu)	carcmaB0161
Carg25695	CmoCh06G010400	Cucurbita moschata (Rifu)	carcmoB0171
Carg25695	CmoCh14G021690	Cucurbita moschata (Rifu)	carcmoB0170
Carg25695	Lsi05G021190	Bottle gourd (USVL1VR-Ls)	carlsiB110
Carg25695	Cp4.1LG03g16090	Cucurbita pepo (Zucchini)	carcpeB0179
Carg25695	Cp4.1LG08g00730	Cucurbita pepo (Zucchini)	carcpeB0180
Carg25695	CsGy3G008090	Cucumber (Gy14) v2	carcgybB0131
Carg25695	MELO3C006026.2	Melon (DHL92) v3.6.1	carmedB0132
Carg25695	CsaV3_3G008080	Cucumber (Chinese Long) v3	carcucB0141
Carg25695	Cla97C05G081000	Watermelon (97103) v2	carwmbB0130
Carg25695	Bhi01G000346	Wax gourd	carwgoB0153

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25695	Carg20891	Silver-seed gourd	carcarB146

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25695	Wax gourd	carwgoB0152