Lsi05G021190.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G021190.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Non-specific lipid-transfer protein
Location	chr05 : 28057903 .. 28058265 (-)
Sequence length	363

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCCCTAGCCTTCGTCGCCGTGTTCACATGCTCCCTGATGGTCGTTCTGTCTCAGAATGAGGACGTAGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGTTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCATCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTAGCGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGACTTTGTCGATGATCGGACCTTATGATTCGAGTCGCATCCCTTTGATTCCAAAAGAATGTGGAATTCCCGTCCAAATCCCTCCCATCGACAATTCCACTGATTGCTCATCGTAA

mRNA sequence

ATGGGGGCCCTAGCCTTCGTCGCCGTGTTCACATGCTCCCTGATGGTCGTTCTGTCTCAGAATGAGGACGTAGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGTTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCATCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTAGCGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGACTTTGTCGATGATCGGACCTTATGATTCGAGTCGCATCCCTTTGATTCCAAAAGAATGTGGAATTCCCGTCCAAATCCCTCCCATCGACAATTCCACTGATTGCTCATCGTAA

Coding sequence (CDS)

ATGGGGGCCCTAGCCTTCGTCGCCGTGTTCACATGCTCCCTGATGGTCGTTCTGTCTCAGAATGAGGACGTAGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGTTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCATCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTAGCGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGACTTTGTCGATGATCGGACCTTATGATTCGAGTCGCATCCCTTTGATTCCAAAAGAATGTGGAATTCCCGTCCAAATCCCTCCCATCGACAATTCCACTGATTGCTCATCGTAA

Protein sequence

MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCSS

Homology

[Close]

BLAST of Lsi05G021190.1 vs. Swiss-Prot
Match: NLTP6_AMBAR (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-14
Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 1


Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTL 85
           +C  V   L+PC GF+ G       + PS +CC+GV  L    KTK D+VA+C CIK+  
Sbjct: 29  TCDTVQNILAPCAGFLTG-------QEPSKACCTGVNNLNNSRKTKADRVAVCNCIKELT 88

Query: 86  SMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
             I  YD  R+PL+  +CG+    P +D + DCS
Sbjct: 89  KSIA-YDPKRMPLLSTKCGVKPDFPAVDKNLDCS 114

[Close]

BLAST of Lsi05G021190.1 vs. Swiss-Prot
Match: NLT12_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13
Identity = 37/97 (38.14%), Postives = 54/97 (55.67%), Query Frame = 1


Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKT 84
           E+C  V + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+  
Sbjct: 39  ETCGTVVRALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGLQRVHACECIQTA 98

Query: 85  LSMIGPYDSSRIPLIPKECGI-PVQIPPIDNSTDCSS 121
           +      D   +  +PK CGI   ++PPID + DC +
Sbjct: 99  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 130

[Close]

BLAST of Lsi05G021190.1 vs. Swiss-Prot
Match: NLT11_PARJU (Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica GN=PMAI PE=1 SV=3)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 1


Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKT 84
           E+C  + + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+  
Sbjct: 2   ETCGTMVRALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGPQRVHACECIQTA 61

Query: 85  LSMIGPYDSSRIPLIPKECGI-PVQIPPIDNSTDCSS 121
           +      D   +  +PK CGI   ++PPID + DC +
Sbjct: 62  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 93

[Close]

BLAST of Lsi05G021190.1 vs. Swiss-Prot
Match: NLT21_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 1


Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKT 84
           E+C  V Q++ PCL F+KG +     + PS  CCSG KKL+ + KT + K   C+CI + 
Sbjct: 33  EACGKVVQDIMPCLHFVKGEE-----KEPSKECCSGTKKLSEEVKTTEQKREACKCIVRA 92

Query: 85  LSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
              I    +  +  +PK+C I   +PPI    DCS
Sbjct: 93  TKGISGIKNELVAEVPKKCDIKTTLPPITADFDCS 122

[Close]

BLAST of Lsi05G021190.1 vs. Swiss-Prot
Match: NLT13_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.6e-13
Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 1


Query: 4   LAFVAVFTCSLMVVLSQNE-DVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 63
           +A V V+T S  V  +      E+C  V   L PCL F++G +     + PS  CCSG K
Sbjct: 16  VAAVLVWTSSASVAPAPAPGSEETCGTVVGALMPCLPFVQGKE-----KEPSKGCCSGAK 75

Query: 64  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGI-PVQIPPIDNSTDCSS 121
           +L G+ KT   +V  CECI+  +      D   +  +PK CGI   ++PPID + DC +
Sbjct: 76  RLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 129

[Close]

BLAST of Lsi05G021190.1 vs. TrEMBL
Match: A0A0A0L5X1_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-43
Identity = 91/117 (77.78%), Postives = 101/117 (86.32%), Query Frame = 1


Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           +LAFVAVFTCSLMVVLSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK
Sbjct: 9   SLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVK 68

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           +LA D KTKKDKVALCEC+KK+LS+IG YD SRIPLIPK+CG+ VQIPPI NSTDCS
Sbjct: 69  QLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]

BLAST of Lsi05G021190.1 vs. TrEMBL
Match: A0A061DSH8_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao GN=TCM_005159 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.3e-21
Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 1


Query: 4   LAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           LA + +   S +     +    SC  V + ++PCL F+KG     GG +PS +CC G + 
Sbjct: 8   LAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGK----GGADPSQACCDGARD 67

Query: 64  LAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           LA +A+TK D+ A+CEC+K  L  +G YD+SR+PLI K+C + + IPPI++ TDCS
Sbjct: 68  LAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCS 119

[Close]

BLAST of Lsi05G021190.1 vs. TrEMBL
Match: I1JRZ7_SOYBN (Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_03G257200 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-20
Identity = 43/95 (45.26%), Postives = 69/95 (72.63%), Query Frame = 1


Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTL 85
           SC  V +E++PC  F++G     G + PS +CC+G+KKL+G+A T +++ A+C+C+K+ L
Sbjct: 24  SCATVIEEVAPCTSFLQG-----GSKQPSVACCNGIKKLSGEAGTHQNRTAICQCLKEGL 83

Query: 86  SMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCSS 121
           + IG YD  R+P +PK+CG+   +PPID +TDCS+
Sbjct: 84  ATIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCSN 113

[Close]

BLAST of Lsi05G021190.1 vs. TrEMBL
Match: A0A0B2RU93_GLYSO (Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.6e-20
Identity = 43/94 (45.74%), Postives = 68/94 (72.34%), Query Frame = 1


Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTL 85
           SC  V +E++PC  F++G     G + PS +CC+G+KKL+G+A T +++ A+C+C+K+ L
Sbjct: 24  SCATVIEEVAPCTSFLQG-----GSKQPSVACCNGIKKLSGEAGTHQNRTAICQCLKEGL 83

Query: 86  SMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           + IG YD  R+P +PK+CG+   +PPID +TDCS
Sbjct: 84  ASIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCS 112

[Close]

BLAST of Lsi05G021190.1 vs. TrEMBL
Match: M5XSP9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023612mg PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19
Identity = 45/110 (40.91%), Postives = 71/110 (64.55%), Query Frame = 1


Query: 10  FTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAK 69
           F   L+ + S      SC  V Q+++PCL F+KG         PS  CC GVK+L+ +A 
Sbjct: 7   FLAVLLFLSSSANSAPSCPTVTQQVAPCLSFVKGGSDT----KPSEECCKGVKELSVNAN 66

Query: 70  TKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           ++ D+ A+C+C+K+ LS +G Y+ S++ L+PK+CG+ + +PPID +TDCS
Sbjct: 67  SRPDREAVCKCLKQVLSSVGNYNPSQVSLLPKKCGLSLNLPPIDKNTDCS 112

[Close]

BLAST of Lsi05G021190.1 vs. TAIR10
Match: AT5G59310.1 (AT5G59310.1 lipid transfer protein 4)

HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12
Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 1


Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           AL F   F  ++ +V S +  + +C  VA  LSPCLG++       GG  P P CC+GVK
Sbjct: 4   ALRFFTCFVLTVFIVASVDAAI-TCGTVASSLSPCLGYLSK-----GGVVPPP-CCAGVK 63

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCSS 121
           KL G A+T  D+   C C++     + P  +S    +P +CG+ +   PI  ST+C++
Sbjct: 64  KLNGMAQTTPDRQQACRCLQSAAKGVNPSLASG---LPGKCGVSIPY-PISTSTNCAT 110

[Close]

BLAST of Lsi05G021190.1 vs. TAIR10
Match: AT2G15050.1 (AT2G15050.1 lipid transfer protein)

HSP 1 Score: 57.8 bits (138), Expect = 5.4e-09
Identity = 36/108 (33.33%), Postives = 50/108 (46.30%), Query Frame = 1


Query: 1   MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 60
           +G L FV V     +   +      SC  V   L PC G++       G  +P P CC+G
Sbjct: 7   LGCLVFVFVIAAGPITAKA----ALSCGEVNSNLKPCTGYLTNG----GITSPGPQCCNG 66

Query: 61  VKKLAGDAKTKKDKVALCECIKKTLSMIGP-YDSSRIPLIPKECGIPV 108
           V+KL G   T  D+   C CIK     +GP  ++ R   IP+ CGI +
Sbjct: 67  VRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKI 106

[Close]

BLAST of Lsi05G021190.1 vs. TAIR10
Match: AT2G38540.1 (AT2G38540.1 lipid transfer protein 1)

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-08
Identity = 38/97 (39.18%), Postives = 50/97 (51.55%), Query Frame = 1


Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTL 85
           SC  V   L+ C+G++       GG  P P+CCSGVK L   AKT  D+   C CI+   
Sbjct: 28  SCGSVNSNLAACIGYVLQ-----GGVIP-PACCSGVKNLNSIAKTTPDRQQACNCIQGAA 87

Query: 86  SMIGP-YDSSRIPLIPKECGIPVQIP-PIDNSTDCSS 121
             +G   ++ R   IPK CG  V IP  I  ST+C +
Sbjct: 88  RALGSGLNAGRAAGIPKACG--VNIPYKISTSTNCKT 116

[Close]

BLAST of Lsi05G021190.1 vs. TAIR10
Match: AT2G18370.1 (AT2G18370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 6.0e-08
Identity = 36/119 (30.25%), Postives = 54/119 (45.38%), Query Frame = 1


Query: 4   LAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           LA ++V    +  +   +E   SC  V Q+L PC+ ++       G  NP  +CC GVK 
Sbjct: 7   LAIISVL--GIFFIPRYSESAISCSVVLQDLQPCVSYLTS-----GSGNPPETCCDGVKS 66

Query: 64  LAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECG--IPVQIPPIDNSTDCSS 121
           LA    T  DK A C+CIK   + +          +   CG  +PV   P   + DC++
Sbjct: 67  LAAATTTSADKKAACQCIKSVANSV-TVKPELAQALASNCGASLPVDASP---TVDCTT 114

[Close]

BLAST of Lsi05G021190.1 vs. TAIR10
Match: AT5G01870.1 (AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 3.9e-07
Identity = 35/104 (33.65%), Postives = 54/104 (51.92%), Query Frame = 1


Query: 21  NEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCEC 80
           +E   SC  V   L PC+ ++       GG  P  SCC+G++ L+  A +  DK  +C C
Sbjct: 20  SEAAISCNAVQANLYPCVVYV-----VQGGAIPY-SCCNGIRMLSKQATSASDKQGVCRC 79

Query: 81  IKKTLSMIGPYDS---SRIPLIPKECGIPVQIP-PIDNSTDCSS 121
           IK  +  +  Y S    +   +P +CG  V++P  ID ST+C+S
Sbjct: 80  IKSVVGRVS-YSSIYLKKAAALPGKCG--VKLPYKIDPSTNCNS 114

[Close]

BLAST of Lsi05G021190.1 vs. NCBI nr
Match: gi|659074983|ref|XP_008437901.1| (PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo])

HSP 1 Score: 186.0 bits (471), Expect = 3.8e-44
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = 1


Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           +LAFVAV TCSLMVVLSQ EDVESCVPVAQ LSPCLGFIKGS        PS SCCSGVK
Sbjct: 9   SLAFVAVLTCSLMVVLSQTEDVESCVPVAQSLSPCLGFIKGSGK------PSASCCSGVK 68

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           +LAG+ KTKKDKVALCECIKK+L+MIGPYD +RIPLIPK+CGI VQIPPI+NST+CS
Sbjct: 69  QLAGNTKTKKDKVALCECIKKSLAMIGPYDPTRIPLIPKQCGISVQIPPINNSTNCS 119

[Close]

BLAST of Lsi05G021190.1 vs. NCBI nr
Match: gi|700201296|gb|KGN56429.1| (hypothetical protein Csa_3G119620 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-43
Identity = 91/117 (77.78%), Postives = 101/117 (86.32%), Query Frame = 1


Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           +LAFVAVFTCSLMVVLSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK
Sbjct: 9   SLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVK 68

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           +LA D KTKKDKVALCEC+KK+LS+IG YD SRIPLIPK+CG+ VQIPPI NSTDCS
Sbjct: 69  QLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]

BLAST of Lsi05G021190.1 vs. NCBI nr
Match: gi|778676915|ref|XP_004134304.2| (PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-43
Identity = 91/117 (77.78%), Postives = 101/117 (86.32%), Query Frame = 1


Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           +LAFVAVFTCSLMVVLSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK
Sbjct: 9   SLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNGK------PSASCCSGVK 68

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           +LA D KTKKDKVALCEC+KK+LS+IG YD SRIPLIPK+CG+ VQIPPI NSTDCS
Sbjct: 69  QLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]

BLAST of Lsi05G021190.1 vs. NCBI nr
Match: gi|470141935|ref|XP_004306679.1| (PREDICTED: probable non-specific lipid-transfer protein 2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 112.5 bits (280), Expect = 5.3e-22
Identity = 50/107 (46.73%), Postives = 75/107 (70.09%), Query Frame = 1


Query: 13  SLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKK 72
           ++++ +S      +C  V ++L+PCL F+KGS      ++PSP+CCSG K+L+ + +T K
Sbjct: 9   AILLFVSAAHSAPTCPVVTKKLAPCLPFVKGSS-----KDPSPACCSGAKELSNNVQTSK 68

Query: 73  DKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           DK A+C C+KKTLS IG Y  S++ LIPK+CG+ + +PPID  TDCS
Sbjct: 69  DKQAVCMCLKKTLSTIGDYQPSKLSLIPKKCGLKLVLPPIDKKTDCS 110

[Close]

BLAST of Lsi05G021190.1 vs. NCBI nr
Match: gi|590721283|ref|XP_007051567.1| (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 108.6 bits (270), Expect = 7.6e-21
Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 1


Query: 4   LAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           LA + +   S +     +    SC  V + ++PCL F+KG     GG +PS +CC G + 
Sbjct: 8   LAMLVLLMLSALATAETSLLAPSCADVTKAVAPCLNFLKGK----GGADPSQACCDGARD 67

Query: 64  LAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           LA +A+TK D+ A+CEC+K  L  +G YD+SR+PLI K+C + + IPPI++ TDCS
Sbjct: 68  LAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCS 119

The following BLAST results are available for this feature:

BLAST of Lsi05G021190.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLTP6_AMBAR	2.4e-14	40.43	Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1	[more]
NLT12_PARJU	1.5e-13	38.14	Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1	[more]
NLT11_PARJU	2.6e-13	37.11	Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica GN...	[more]
NLT21_PARJU	2.6e-13	37.89	Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1	[more]
NLT13_PARJU	7.6e-13	36.13	Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1	[more]

BLAST of Lsi05G021190.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5X1_CUCSA	1.3e-43	77.78	Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G119620 PE=3 SV=1	[more]
A0A061DSH8_THECC	5.3e-21	42.24	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
I1JRZ7_SOYBN	2.0e-20	45.26	Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_03G257200 PE=3 SV=1	[more]
A0A0B2RU93_GLYSO	2.6e-20	45.74	Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_029007 PE=3 SV=1	[more]
M5XSP9_PRUPE	1.7e-19	40.91	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023612mg PE=3 SV=1	[more]

BLAST of Lsi05G021190.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59310.1	6.9e-12	35.59	lipid transfer protein 4	[more]
AT2G15050.1	5.4e-09	33.33	lipid transfer protein	[more]
AT2G38540.1	2.1e-08	39.18	lipid transfer protein 1	[more]
AT2G18370.1	6.0e-08	30.25	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G01870.1	3.9e-07	33.65	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of Lsi05G021190.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074983\|ref\|XP_008437901.1\|	3.8e-44	79.49	PREDICTED: non-specific lipid-transfer protein 3-like [Cucumis melo]	[more]
gi\|700201296\|gb\|KGN56429.1\|	1.9e-43	77.78	hypothetical protein Csa_3G119620 [Cucumis sativus]	[more]
gi\|778676915\|ref\|XP_004134304.2\|	1.9e-43	77.78	PREDICTED: non-specific lipid-transfer protein Cw18-like [Cucumis sativus]	[more]
gi\|470141935\|ref\|XP_004306679.1\|	5.3e-22	46.73	PREDICTED: probable non-specific lipid-transfer protein 2 [Fragaria vesca subsp....	[more]
gi\|590721283\|ref\|XP_007051567.1\|	7.6e-21	42.24	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006869	lipid transport

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store
IPR000528	Plant_LTP

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008289	lipid binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi05G021190	Lsi05G021190	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G021190.1.CDS.1	Lsi05G021190.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi05G021190.1	Lsi05G021190.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 26..42 score: 8.7E-10coord: 73..88 score: 8.7E-10coord: 90..107 score: 8.7E-10coord: 109..120 score: 8.7
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 8..108 score: 3.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 27..118 score: 3.9
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 26..119 score: 1.09
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 26..119 score: 4.0
None	No IPR available	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 1..119 score: 4.0
None	No IPR available	PANTHER	PTHR33076:SF9	SUBFAMILY NOT NAMED	coord: 1..119 score: 4.0