CsGy6G009110 (gene) Cucumber (Gy14) v2

NameCsGy6G009110
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionhypothetical protein
LocationChr6 : 7550500 .. 7551165 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGCAGGTGTTCGCACTTATTCGCCCCACCCTCCACAACTTCACTAACAGCCACCGCATTGCTGATGAGAGTATGTTCACTTCAACTGATCAATTCCCAATTTACGCTGCCGCCAACAACCGTCGAACCTTCTCCTCCTCCATCTTCAACATCATTCGTGCTCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCCGCCGTTCACCGCTCCCCCGACGCCTTCTGGCTCTCCGGTGACCACTATTTTGCCTCCACTATTTCTGAGATCAACCACCTTATGGTAAGCGATGGCATGCGTTACGCCATATTGATGTAAAAGCTCTAAAACTAATCTTACCAAGCACACATATATATGTATTAGAAGTACTTTAGCTTTTATTTTGGTGGTAACCTGATGAATAATCACTTGGGTTTTTGTTTTTGTTTGTCTCTTTTTTGGTTAAATTTGATTTAGCGTATTATGTTTCTAATTTGTTACCAGTCCCATAATCAAATTAAATTTATATATAAGAAAAAAAAGTTACTCTTTTCCCAAGAATATCAATAACTCTCGTCTTTTTTGTGCCTCTGTTCATGCACGTACATAAATTATTTAATGGAGTAAGTACATGAACGTATCAAATGAATTTCCTAGTACCTATCTCCATCCCTTACTTACCTTTAG

mRNA sequence

ATGTGGCAGGTGTTCGCACTTATTCGCCCCACCCTCCACAACTTCACTAACAGCCACCGCATTGCTGATGAGAGTATGTTCACTTCAACTGATCAATTCCCAATTTACGCTGCCGCCAACAACCGTCGAACCTTCTCCTCCTCCATCTTCAACATCATTCGTGCTCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCCGCCGTTCACCGCTCCCCCGACGCCTTCTGGCTCTCCGGTGACCACTATTTTGCCTCCACTATTTCTGAGATCAACCACCTTATGTACCTATCTCCATCCCTTACTTACCTTTAG

Coding sequence (CDS)

ATGTGGCAGGTGTTCGCACTTATTCGCCCCACCCTCCACAACTTCACTAACAGCCACCGCATTGCTGATGAGAGTATGTTCACTTCAACTGATCAATTCCCAATTTACGCTGCCGCCAACAACCGTCGAACCTTCTCCTCCTCCATCTTCAACATCATTCGTGCTCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCCGCCGTTCACCGCTCCCCCGACGCCTTCTGGCTCTCCGGTGACCACTATTTTGCCTCCACTATTTCTGAGATCAACCACCTTATGTACCTATCTCCATCCCTTACTTACCTTTAG

Protein sequence

MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSILSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMYLSPSLTYL
BLAST of CsGy6G009110 vs. NCBI nr
Match: XP_011656875.1 (PREDICTED: uncharacterized protein LOC105435779 [Cucumis sativus] >KGN46586.1 hypothetical protein Csa_6G110050 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 3.5e-47
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL 60
          MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL
Sbjct: 1  MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL 60

Query: 61 SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM 95
          SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM
Sbjct: 61 SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM 94

BLAST of CsGy6G009110 vs. NCBI nr
Match: XP_008455967.1 (PREDICTED: uncharacterized protein LOC103496030 [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-42
Identity = 86/95 (90.53%), Postives = 93/95 (97.89%), Query Frame = 0

Query: 1  MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIY-AAANNRRTFSSSIFNIIRAPFSI 60
          MW+VFA+IRPTLHNFTN+HRIADESMFT+TDQFP Y AAANNRRTFS++IFNIIRAPFSI
Sbjct: 1  MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61 LSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM 95
          LSCFAPP+VHRSPDAFWLSGDHYFASTISEINHLM
Sbjct: 61 LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLM 95

BLAST of CsGy6G009110 vs. NCBI nr
Match: XP_022985817.1 (uncharacterized protein LOC111483748 [Cucurbita maxima])

HSP 1 Score: 142.5 bits (358), Expect = 7.9e-31
Identity = 72/102 (70.59%), Postives = 81/102 (79.41%), Query Frame = 0

Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANN--------RRTFSSSIFNI 60
           MW++ A +RPTLHNFTNSHR+ADESMFT+T +FPIYA AN          RTF S++F+I
Sbjct: 1   MWRLIAALRPTLHNFTNSHRVADESMFTTT-EFPIYAVANXXXXXXPAAHRTF-SAVFSI 60

Query: 61  IRAPFSILSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM 95
           IRAPFSILSCFAPP VH S D FWLS DHYFASTISE NHLM
Sbjct: 61  IRAPFSILSCFAPPPVHSSADTFWLSTDHYFASTISETNHLM 100

BLAST of CsGy6G009110 vs. NCBI nr
Match: XP_022944204.1 (uncharacterized protein LOC111448722 [Cucurbita moschata])

HSP 1 Score: 139.8 bits (351), Expect = 5.1e-30
Identity = 70/102 (68.63%), Postives = 81/102 (79.41%), Query Frame = 0

Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANN--------RRTFSSSIFNI 60
           MW++ A +RPTLHNFTNSHR+ADESMFT+T +FPIYA AN+         RT  +++F+I
Sbjct: 1   MWRLIAALRPTLHNFTNSHRVADESMFTTT-EFPIYAVANHHXXXRPAAHRTI-AAVFSI 60

Query: 61  IRAPFSILSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM 95
           IRAPFSILSCFAPP VH S D FWLS DHYFASTISE NHLM
Sbjct: 61  IRAPFSILSCFAPPPVHSSADTFWLSTDHYFASTISETNHLM 100

BLAST of CsGy6G009110 vs. NCBI nr
Match: XP_023513038.1 (uncharacterized protein LOC111777603 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.4 bits (350), Expect = 6.7e-30
Identity = 71/103 (68.93%), Postives = 80/103 (77.67%), Query Frame = 0

Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAA---------NNRRTFSSSIFN 60
           MW++ A +RPTLHNFTNSHR+ADESMFT+T +FPIYA A            RTF S++F+
Sbjct: 1   MWRLIAALRPTLHNFTNSHRVADESMFTTT-EFPIYAVAXXXXXXXXXXXHRTF-SAVFS 60

Query: 61  IIRAPFSILSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM 95
           IIRAPFSILSCFAPP VH S D FWLS DHYFASTISE NHLM
Sbjct: 61  IIRAPFSILSCFAPPPVHSSADTFWLSTDHYFASTISETNHLM 101

BLAST of CsGy6G009110 vs. TAIR10
Match: AT5G35732.1 (unknown protein)

HSP 1 Score: 63.9 bits (154), Expect = 6.5e-11
Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 0

Query: 1   MWQVFALIRPTLHNFTNSHRIADES-MFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSI 60
           M Q+ +++R  L N   S R+AD++ + +ST        AN RR   +S+  I+R PFSI
Sbjct: 1   MTQMLSVLRRNLQNLRKSPRVADDTELPSSTSGAGPGVVANGRRDGFNSV--IMRFPFSI 60

Query: 61  LSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMYLSPSLTY 103
           +SCFA P V    D  W+SGD+    +ISE+NHLM +S S+ Y
Sbjct: 61  ISCFAVPRV-SGTDGLWVSGDY---GSISEVNHLM-VSDSMRY 96

BLAST of CsGy6G009110 vs. TAIR10
Match: AT2G04795.1 (unknown protein)

HSP 1 Score: 57.4 bits (137), Expect = 6.1e-09
Identity = 35/94 (37.23%), Postives = 51/94 (54.26%), Query Frame = 0

Query: 1  MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL 60
          M ++ +++R  L N   S R+ADES   ST     +   N       S   I++ P SI+
Sbjct: 1  MLKMLSILRRNLQNLRKSPRVADESALPSTTVNGDHGGGN------GSNGGIMKFPLSIM 60

Query: 61 SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM 95
          SCF+ P V R+ D  W+SGD+     +SE+NHLM
Sbjct: 61 SCFSVPRVSRA-DGVWVSGDY---GRVSEVNHLM 84

BLAST of CsGy6G009110 vs. TrEMBL
Match: tr|A0A0A0KFS1|A0A0A0KFS1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G110050 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.3e-47
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL 60
          MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL
Sbjct: 1  MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL 60

Query: 61 SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM 95
          SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM
Sbjct: 61 SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM 94

BLAST of CsGy6G009110 vs. TrEMBL
Match: tr|A0A1S3C290|A0A1S3C290_CUCME (uncharacterized protein LOC103496030 OS=Cucumis melo OX=3656 GN=LOC103496030 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.8e-43
Identity = 86/95 (90.53%), Postives = 93/95 (97.89%), Query Frame = 0

Query: 1  MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIY-AAANNRRTFSSSIFNIIRAPFSI 60
          MW+VFA+IRPTLHNFTN+HRIADESMFT+TDQFP Y AAANNRRTFS++IFNIIRAPFSI
Sbjct: 1  MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61 LSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLM 95
          LSCFAPP+VHRSPDAFWLSGDHYFASTISEINHLM
Sbjct: 61 LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLM 95

BLAST of CsGy6G009110 vs. TrEMBL
Match: tr|A0A067KF26|A0A067KF26_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13803 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.1e-12
Identity = 49/110 (44.55%), Postives = 64/110 (58.18%), Query Frame = 0

Query: 1   MWQVFALIRPTLHNFTNSHRIADESMF-----TSTDQFPIYAA---ANNRRTFSSSIFNI 60
           MW+  A IR  +HN   S R+ADESMF      +  +FPI  A   A  +R   S+IF I
Sbjct: 1   MWRSVARIRRNMHNLRKSPRVADESMFGGMNINNGTEFPIIFARETAGRQRIGFSAIFRI 60

Query: 61  IRAPFSILSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMYLSPSLTY 103
           + APFS+LSCF+        D  W+SG H FA  ISE+NHLM ++ S+ Y
Sbjct: 61  VLAPFSLLSCFSSQPHANGVDGLWVSGRHEFAQ-ISEMNHLM-VNDSMRY 108

BLAST of CsGy6G009110 vs. TrEMBL
Match: tr|A0A2I4HJL4|A0A2I4HJL4_9ROSI (uncharacterized protein LOC109012639 OS=Juglans regia OX=51240 GN=LOC109018670 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.6e-11
Identity = 44/106 (41.51%), Postives = 62/106 (58.49%), Query Frame = 0

Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFT----STDQFPIYAAANNRRTFSSSIFNIIRAP 60
           MW++ A +R  L N   S R+ADESMF       DQ PIY    N     S I++++R P
Sbjct: 1   MWRMLAAVRRNLQNIKKSPRVADESMFAGGNGGRDQLPIYGRRQNGWNGFSLIYSVVRVP 60

Query: 61  FSILSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMYLSPSLTY 103
            SILSCF+ P V+   D  W+SG+    + +SE+NHLM ++ S+ Y
Sbjct: 61  ISILSCFSHPHVN-GTDGVWVSGEF---AQLSEMNHLM-VNDSMRY 101

BLAST of CsGy6G009110 vs. TrEMBL
Match: tr|A0A2N9INL2|A0A2N9INL2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54304 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.3e-10
Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 0

Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTD--QFPIYAAANNRR-----TFSSSIFNII 60
           MW++ A +   L N   S R+ADE+MF + +  + PIYA  N  R        S I+N++
Sbjct: 1   MWRILAAVGRNLQNIKKSPRVADENMFGAGNGAELPIYARDNMERRQRGWNGFSFIYNVV 60

Query: 61  RAPFSILSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMYLSPSLTY 103
           RAP SILSCF+ P V+   D  W+SG+    + ISE+NHLM +S S+ Y
Sbjct: 61  RAPISILSCFSHPHVN-GADGLWVSGEF---AQISEMNHLM-VSDSMRY 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011656875.13.5e-47100.00PREDICTED: uncharacterized protein LOC105435779 [Cucumis sativus] >KGN46586.1 hy... [more]
XP_008455967.11.2e-4290.53PREDICTED: uncharacterized protein LOC103496030 [Cucumis melo][more]
XP_022985817.17.9e-3170.59uncharacterized protein LOC111483748 [Cucurbita maxima][more]
XP_022944204.15.1e-3068.63uncharacterized protein LOC111448722 [Cucurbita moschata][more]
XP_023513038.16.7e-3068.93uncharacterized protein LOC111777603 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G35732.16.5e-1141.75unknown protein[more]
AT2G04795.16.1e-0937.23unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KFS1|A0A0A0KFS1_CUCSA2.3e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G110050 PE=4 SV=1[more]
tr|A0A1S3C290|A0A1S3C290_CUCME7.8e-4390.53uncharacterized protein LOC103496030 OS=Cucumis melo OX=3656 GN=LOC103496030 PE=... [more]
tr|A0A067KF26|A0A067KF26_JATCU7.1e-1244.55Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13803 PE=4 SV=1[more]
tr|A0A2I4HJL4|A0A2I4HJL4_9ROSI4.6e-1141.51uncharacterized protein LOC109012639 OS=Juglans regia OX=51240 GN=LOC109018670 P... [more]
tr|A0A2N9INL2|A0A2N9INL2_FAGSY2.3e-1042.20Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54304 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G009110.1CsGy6G009110.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..103

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G009110Cla015658Watermelon (97103) v1cgybwmB484
CsGy6G009110MELO3C018891Melon (DHL92) v3.5.1cgybmeB402
CsGy6G009110MELO3C019368Melon (DHL92) v3.5.1cgybmeB367
CsGy6G009110ClCG02G009450Watermelon (Charleston Gray)cgybwcgB414
CsGy6G009110ClCG02G002530Watermelon (Charleston Gray)cgybwcgB409
CsGy6G009110CSPI07G02960Wild cucumber (PI 183967)cgybcpiB297
CsGy6G009110CSPI06G08990Wild cucumber (PI 183967)cgybcpiB288
CsGy6G009110CmaCh11G012720Cucurbita maxima (Rimu)cgybcmaB710
CsGy6G009110CmaCh19G008820Cucurbita maxima (Rimu)cgybcmaB784
CsGy6G009110CmaCh20G006650Cucurbita maxima (Rimu)cgybcmaB791
CsGy6G009110CmoCh19G008950Cucurbita moschata (Rifu)cgybcmoB763
CsGy6G009110CmoCh11G018500Cucurbita moschata (Rifu)cgybcmoB696
CsGy6G009110Lsi11G013770Bottle gourd (USVL1VR-Ls)cgyblsiB393
CsGy6G009110Cp4.1LG04g03990Cucurbita pepo (Zucchini)cgybcpeB844
CsGy6G009110Cp4.1LG15g07070Cucurbita pepo (Zucchini)cgybcpeB751
CsGy6G009110MELO3C019368.2Melon (DHL92) v3.6.1cgybmedB368
CsGy6G009110MELO3C018891.2Melon (DHL92) v3.6.1cgybmedB401
CsGy6G009110CsaV3_6G009360Cucumber (Chinese Long) v3cgybcucB298
CsGy6G009110CsaV3_7G002850Cucumber (Chinese Long) v3cgybcucB306
CsGy6G009110Cla97C02G029010Watermelon (97103) v2cgybwmbB412
CsGy6G009110Cla97C02G035790Watermelon (97103) v2cgybwmbB420
CsGy6G009110Bhi05G001266Wax gourdcgybwgoB536
CsGy6G009110Carg18060Silver-seed gourdcarcgybB1047
CsGy6G009110Carg16090Silver-seed gourdcarcgybB0357
CsGy6G009110Carg04163Silver-seed gourdcarcgybB0216
The following gene(s) are paralogous to this gene:

None