ClCG02G002530 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G002530
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr02 : 2565918 .. 2566253 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCGCGAGTGGCAGATGAAAGCATGTACGGCGTCGGTGTTGCCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGGCCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACAGTCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTCTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAA

mRNA sequence

ATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCGCGAGTGGCAGATGAAAGCATGTACGGCGTCGGTGTTGCCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGGCCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACAGTCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTCTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAA

Coding sequence (CDS)

ATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCGCGAGTGGCAGATGAAAGCATGTACGGCGTCGGTGTTGCCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGGCCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACAGTCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTCTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAA

Protein sequence

MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM
Homology
[Close]
BLAST of ClCG02G002530 vs. TrEMBL
Match: A0A0A0K391_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037480 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-31
Identity = 71/81 (87.65%), Postives = 72/81 (88.89%), Query Frame = 1 

Query: 26  MYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW 85
           MYG    GVDGGGRV AVVDG RREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW
Sbjct: 1   MYG---GGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW 60

Query: 86  VSGEFPRISEVNHLMVSDSMR 107
           VSGEFPRISEVNHLM S+  R
Sbjct: 61  VSGEFPRISEVNHLMQSNLWR 78

[Close]
BLAST of ClCG02G002530 vs. TrEMBL
Match: F6HII7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02120 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-28
Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGG---RREGNSYGFS 60
           MW + AA+RRN  NIRKSPRVADE+M+G       GG +    + G    RR     GFS
Sbjct: 1   MWHMLAAMRRNFQNIRKSPRVADENMFG-------GGNQAELPIFGRDMERRARGWDGFS 60

Query: 61  MIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
            +YS++R P S+LSCFS PHVNG DG+WVSG+F  ISE+NHLMVSDSMRYAILM
Sbjct: 61  AVYSIVRVPLSLLSCFSHPHVNGADGVWVSGDFAHISEMNHLMVSDSMRYAILM 107

[Close]
BLAST of ClCG02G002530 vs. TrEMBL
Match: A0A061DMU7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002274 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.1e-28
Identity = 66/111 (59.46%), Postives = 81/111 (72.97%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           MWR+   +RRNL NI+KSPRVADE+M G GV   +  G    +    R  G+  G S+I 
Sbjct: 1   MWRMLVVLRRNLQNIKKSPRVADENMVG-GVNTNNNNGAEMPIFIDRRPRGSWNGLSVIC 60

Query: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
           S++R P S++SCFSQPHVNG DG+WVS EF +ISE+NHLMVSDSMRYAILM
Sbjct: 61  SVVRAPLSLVSCFSQPHVNGADGVWVSSEFAQISEMNHLMVSDSMRYAILM 110

[Close]
BLAST of ClCG02G002530 vs. TrEMBL
Match: A0A067KF26_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13803 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.1e-26
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           MWR  A +RRN+HN+RKSPRVADESM+  G   ++ G     +           GFS I+
Sbjct: 1   MWRSVARIRRNMHNLRKSPRVADESMF--GGMNINNGTEFPIIFARETAGRQRIGFSAIF 60

Query: 61  SLLRTPFSILSCF-SQPHVNGVDGMWVSG--EFPRISEVNHLMVSDSMRYAILM 112
            ++  PFS+LSCF SQPH NGVDG+WVSG  EF +ISE+NHLMV+DSMRYAILM
Sbjct: 61  RIVLAPFSLLSCFSSQPHANGVDGLWVSGRHEFAQISEMNHLMVNDSMRYAILM 112

[Close]
BLAST of ClCG02G002530 vs. TrEMBL
Match: I3SRB2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-25
Identity = 67/111 (60.36%), Postives = 78/111 (70.27%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           MWRL AAV RNL N +KS RVADESM+    AG D G R        R + +  GFS+IY
Sbjct: 1   MWRLVAAVTRNLQNTKKSSRVADESMFE---AGHDRGIR--------RSQHDWSGFSLIY 60

Query: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
           ++L  P SILSC S P  NGVDG WVSGEF +ISE+NH+MV+DSMRYAILM
Sbjct: 61  AILHAPISILSCVSHPQANGVDGAWVSGEFSQISEMNHIMVNDSMRYAILM 100

[Close]
BLAST of ClCG02G002530 vs. TAIR10
Match: AT5G35732.1 (AT5G35732.1 unknown protein)

HSP 1 Score: 110.5 bits (275), Expect = 6.5e-25
Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           M ++ + +RRNL N+RKSPRVAD++      +G   G     VV  GRR+G    F+ + 
Sbjct: 1   MTQMLSVLRRNLQNLRKSPRVADDTELPSSTSGAGPG-----VVANGRRDG----FNSV- 60

Query: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
            ++R PFSI+SCF+ P V+G DG+WVSG++  ISEVNHLMVSDSMRYAILM
Sbjct: 61  -IMRFPFSIISCFAVPRVSGTDGLWVSGDYGSISEVNHLMVSDSMRYAILM 100

[Close]
BLAST of ClCG02G002530 vs. TAIR10
Match: AT2G04795.1 (AT2G04795.1 unknown protein)

HSP 1 Score: 97.4 bits (241), Expect = 5.7e-21
Identity = 54/112 (48.21%), Postives = 70/112 (62.50%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADES-MYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMI 60
           M ++ + +RRNL N+RKSPRVADES +    V G  GGG  +   +GG            
Sbjct: 1   MLKMLSILRRNLQNLRKSPRVADESALPSTTVNGDHGGGNGS---NGG------------ 60

Query: 61  YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
             +++ P SI+SCFS P V+  DG+WVSG++ R+SEVNHLMV D MRYA+LM
Sbjct: 61  --IMKFPLSIMSCFSVPRVSRADGVWVSGDYGRVSEVNHLMVCDGMRYALLM 95

[Close]
BLAST of ClCG02G002530 vs. NCBI nr
Match: gi|449453582|ref|XP_004144535.1| (PREDICTED: uncharacterized protein LOC101211016 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 3.7e-46
Identity = 96/106 (90.57%), Postives = 97/106 (91.51%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           MWRLAAAVRRNLHNIRKSPRVADESMYG    GVDGGGRV AVVDG RREGNSYGFSMIY
Sbjct: 1   MWRLAAAVRRNLHNIRKSPRVADESMYG---GGVDGGGRVGAVVDGDRREGNSYGFSMIY 60

Query: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMR 107
           SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM S+  R
Sbjct: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 103

[Close]
BLAST of ClCG02G002530 vs. NCBI nr
Match: gi|659110985|ref|XP_008455515.1| (PREDICTED: uncharacterized protein LOC103495667 [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-45
Identity = 97/107 (90.65%), Postives = 98/107 (91.59%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVV-DGGRREGNSYGFSMI 60
           MWRLAAAVRRNLHNIRKSPRVADESMYG    GVDGGGRVAAVV DG RREGNSYGFSMI
Sbjct: 41  MWRLAAAVRRNLHNIRKSPRVADESMYG---GGVDGGGRVAAVVVDGDRREGNSYGFSMI 100

Query: 61  YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMR 107
           YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM S+  R
Sbjct: 101 YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 144

[Close]
BLAST of ClCG02G002530 vs. NCBI nr
Match: gi|700188211|gb|KGN43444.1| (hypothetical protein Csa_7G037480 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-31
Identity = 71/81 (87.65%), Postives = 72/81 (88.89%), Query Frame = 1 

Query: 26  MYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW 85
           MYG    GVDGGGRV AVVDG RREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW
Sbjct: 1   MYG---GGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMW 60

Query: 86  VSGEFPRISEVNHLMVSDSMR 107
           VSGEFPRISEVNHLM S+  R
Sbjct: 61  VSGEFPRISEVNHLMQSNLWR 78

[Close]
BLAST of ClCG02G002530 vs. NCBI nr
Match: gi|731409715|ref|XP_010657294.1| (PREDICTED: uncharacterized protein LOC100267059 [Vitis vinifera])

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-28
Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGG---RREGNSYGFS 60
           MW + AA+RRN  NIRKSPRVADE+M+G       GG +    + G    RR     GFS
Sbjct: 1   MWHMLAAMRRNFQNIRKSPRVADENMFG-------GGNQAELPIFGRDMERRARGWDGFS 60

Query: 61  MIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
            +YS++R P S+LSCFS PHVNG DG+WVSG+F  ISE+NHLMVSDSMRYAILM
Sbjct: 61  AVYSIVRVPLSLLSCFSHPHVNGADGVWVSGDFAHISEMNHLMVSDSMRYAILM 107

[Close]
BLAST of ClCG02G002530 vs. NCBI nr
Match: gi|1009128082|ref|XP_015881037.1| (PREDICTED: uncharacterized protein LOC107416995 [Ziziphus jujuba])

HSP 1 Score: 132.1 bits (331), Expect = 6.0e-28
Identity = 68/111 (61.26%), Postives = 82/111 (73.87%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIY 60
           M R+  ++R+N  NI KSPRVADESMYG GV G  GGG +  +    RR     GF ++Y
Sbjct: 2   MGRVLGSLRQNFQNIGKSPRVADESMYG-GVGG-GGGGNIEIME---RRRSGWKGFLIVY 61

Query: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
           S++R PFS+ SCFS PHVNG DG+W SGEF +ISE+NHLMVSDSMRYAILM
Sbjct: 62  SVVRAPFSLFSCFSHPHVNGADGVWASGEFAQISEMNHLMVSDSMRYAILM 107

The following BLAST results are available for this feature:
BLAST of ClCG02G002530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K391_CUCSA1.8e-3187.65Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037480 PE=4 SV=1[more]
F6HII7_VITVI1.1e-2859.65Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02120 PE=4 SV=... [more]
A0A061DMU7_THECC7.1e-2859.46Uncharacterized protein OS=Theobroma cacao GN=TCM_002274 PE=4 SV=1[more]
A0A067KF26_JATCU5.1e-2657.02Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13803 PE=4 SV=1[more]
I3SRB2_LOTJA1.1e-2560.36Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
BLAST of ClCG02G002530 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G35732.16.5e-2553.15 unknown protein[more]
AT2G04795.15.7e-2148.21 unknown protein[more]
BLAST of ClCG02G002530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453582|ref|XP_004144535.1|3.7e-4690.57PREDICTED: uncharacterized protein LOC101211016 [Cucumis sativus][more]
gi|659110985|ref|XP_008455515.1|3.1e-4590.65PREDICTED: uncharacterized protein LOC103495667 [Cucumis melo][more]
gi|700188211|gb|KGN43444.1|2.6e-3187.65hypothetical protein Csa_7G037480 [Cucumis sativus][more]
gi|731409715|ref|XP_010657294.1|1.6e-2859.65PREDICTED: uncharacterized protein LOC100267059 [Vitis vinifera][more]
gi|1009128082|ref|XP_015881037.1|6.0e-2861.26PREDICTED: uncharacterized protein LOC107416995 [Ziziphus jujuba][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G002530.1ClCG02G002530.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG02G002530Csa7G037480Cucumber (Chinese Long) v2cuwcgB546
ClCG02G002530MELO3C019368Melon (DHL92) v3.5.1mewcgB092
ClCG02G002530MELO3C018891Melon (DHL92) v3.5.1mewcgB195
ClCG02G002530Cla015658Watermelon (97103) v1wcgwmB198
ClCG02G002530Cla97C02G035790Watermelon (97103) v2wcgwmbB148
ClCG02G002530Cla97C02G029010Watermelon (97103) v2wcgwmbB138
ClCG02G002530CSPI06G08990Wild cucumber (PI 183967)cpiwcgB465
ClCG02G002530CSPI07G02960Wild cucumber (PI 183967)cpiwcgB574
ClCG02G002530Cucsa.120440Cucumber (Gy14) v1cgywcgB185
ClCG02G002530Cucsa.180980Cucumber (Gy14) v1cgywcgB322
ClCG02G002530CmaCh11G012720Cucurbita maxima (Rimu)cmawcgB097
ClCG02G002530CmaCh19G008820Cucurbita maxima (Rimu)cmawcgB460
ClCG02G002530CmaCh20G006650Cucurbita maxima (Rimu)cmawcgB483
ClCG02G002530CmoCh19G008950Cucurbita moschata (Rifu)cmowcgB459
ClCG02G002530CmoCh11G018500Cucurbita moschata (Rifu)cmowcgB094
ClCG02G002530Lsi11G013770Bottle gourd (USVL1VR-Ls)lsiwcgB097
ClCG02G002530Cp4.1LG15g07070Cucurbita pepo (Zucchini)cpewcgB233
ClCG02G002530Cp4.1LG04g03990Cucurbita pepo (Zucchini)cpewcgB596
ClCG02G002530CsGy6G009110Cucumber (Gy14) v2cgybwcgB409
ClCG02G002530MELO3C018891.2Melon (DHL92) v3.6.1medwcgB190
ClCG02G002530MELO3C019368.2Melon (DHL92) v3.6.1medwcgB094
ClCG02G002530Carg18060Silver-seed gourdcarwcgB1037
ClCG02G002530Carg04163Silver-seed gourdcarwcgB0194
ClCG02G002530Carg16090Silver-seed gourdcarwcgB0336
ClCG02G002530CsaV3_6G009360Cucumber (Chinese Long) v3cucwcgB464
ClCG02G002530CsaV3_7G002850Cucumber (Chinese Long) v3cucwcgB571
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
ClCG02G002530ClCG02G009450Watermelon (Charleston Gray)wcgwcgB120
The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G002530Cucumber (Chinese Long) v3cucwcgB219
ClCG02G002530Cucumber (Chinese Long) v3cucwcgB570
ClCG02G002530Watermelon (97103) v2wcgwmbB135
ClCG02G002530Watermelon (97103) v2wcgwmbB150
ClCG02G002530Wax gourdwcgwgoB266
ClCG02G002530Wax gourdwcgwgoB305
ClCG02G002530Watermelon (Charleston Gray)wcgwcgB047
ClCG02G002530Wild cucumber (PI 183967)cpiwcgB218
ClCG02G002530Cucurbita pepo (Zucchini)cpewcgB267
ClCG02G002530Bottle gourd (USVL1VR-Ls)lsiwcgB058
ClCG02G002530Bottle gourd (USVL1VR-Ls)lsiwcgB095
ClCG02G002530Cucumber (Gy14) v2cgybwcgB198
ClCG02G002530Cucumber (Gy14) v2cgybwcgB504
ClCG02G002530Cucumber (Gy14) v2cgybwcgB506