MELO3C018891 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018891
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionD-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
Locationchr1 : 3790572 .. 3791340 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACACCCACCAACTTCACAATCTTCAAAAATCTCTCCTTATTAAACTTTCTTCTCCCAAAATCGTCTTCTTTTGTATTACAACAATTCTCAAGAACAAAAAAATAACTAAACCCATGTGGCGGTTGGCGGCGGCAGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGAGGAGTAGATGGCGGCGGAAGGGTGGCGGCGGTGGTGGTGGACGGTGACCGGAGAGAAGGTAATTCATATGGGTTTTCTATGATTTACAGCCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTTTCTCAACCACACGTTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATATTAATGTAAATAAAAATAAATAAATGGTGTTTCTTCCTCTGTAGTAATTTCGATTGGATCTGGTTTTCAAAAAGAGTCACAAATCGAATGCTATAGAATTATTAATTGGGATCATATACTTTCGTTTTTACCTTTCTTTTTGTTTCCTTTTTGTGTTAGCATATTGTATAACAAATTGTGGGTGTGTAACGTTATATATGCTCGAATTGACGGTTTAAAAATGACTTGGATTTTGAAATTTAGTGATGTTATATGTATATGTTTTTGTATACAATAATGTATTAATATTAGTTCAAAAGTTACAGAAAAGAGTTTCAATGTAATAACTTTTGT

mRNA sequence

AAACACCCACCAACTTCACAATCTTCAAAAATCTCTCCTTATTAAACTTTCTTCTCCCAAAATCGTCTTCTTTTGTATTACAACAATTCTCAAGAACAAAAAAATAACTAAACCCATGTGGCGGTTGGCGGCGGCAGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGAGGAGTAGATGGCGGCGGAAGGGTGGCGGCGGTGGTGGTGGACGGTGACCGGAGAGAAGGTAATTCATATGGGTTTTCTATGATTTACAGCCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTTTCTCAACCACACGTTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATATTAATGTAAATAAAAATAAATAAATGGTGTTTCTTCCTCTGTAGTAATTTCGATTGGATCTGGTTTTCAAAAAGAGTCACAAATCGAATGCTATAGAATTATTAATTGGGATCATATACTTTCGTTTTTACCTTTCTTTTTGTTTCCTTTTTGTGTTAGCATATTGTATAACAAATTGTGGGTGTGTAACGTTATATATGCTCGAATTGACGGTTTAAAAATGACTTGGATTTTGAAATTTAGTGATGTTATATGTATATGTTTTTGTATACAATAATGTATTAATATTAGTTCAAAAGTTACAGAAAAGAGTTTCAATGTAATAACTTTTGT

Coding sequence (CDS)

ATGTGGCGGTTGGCGGCGGCAGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGAGGAGTAGATGGCGGCGGAAGGGTGGCGGCGGTGGTGGTGGACGGTGACCGGAGAGAAGGTAATTCATATGGGTTTTCTATGATTTACAGCCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTTTCTCAACCACACGTTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATATTAATGTAA

Protein sequence

MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM*
Homology
[Close]
BLAST of MELO3C018891 vs. TrEMBL
Match: A0A0A0K391_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037480 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-33
Identity = 73/79 (92.41%), Postives = 74/79 (93.67%), Query Frame = 1 

Query: 26  MYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVS 85
           MYGGGVDGGGRV AV VDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVS
Sbjct: 1   MYGGGVDGGGRVGAV-VDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVS 60

Query: 86  GEFPRISEVNHLMVSDSMR 105
           GEFPRISEVNHLM S+  R
Sbjct: 61  GEFPRISEVNHLMQSNLWR 78

[Close]
BLAST of MELO3C018891 vs. TrEMBL
Match: F6HII7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02120 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.4e-30
Identity = 68/109 (62.39%), Postives = 81/109 (74.31%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 60
           MW + AA+RRN  NIRKSPRVADE+M+GGG      +     D +RR     GFS +YS+
Sbjct: 1   MWHMLAAMRRNFQNIRKSPRVADENMFGGG--NQAELPIFGRDMERRARGWDGFSAVYSI 60

Query: 61  LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 110
           +R P S+LSCFS PHVNG DG+WVSG+F  ISE+NHLMVSDSMRYAILM
Sbjct: 61  VRVPLSLLSCFSHPHVNGADGVWVSGDFAHISEMNHLMVSDSMRYAILM 107

[Close]
BLAST of MELO3C018891 vs. TrEMBL
Match: A0A061DMU7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002274 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-28
Identity = 67/110 (60.91%), Postives = 82/110 (74.55%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSY-GFSMIYS 60
           MWR+   +RRNL NI+KSPRVADE+M GG        A + +  DRR   S+ G S+I S
Sbjct: 1   MWRMLVVLRRNLQNIKKSPRVADENMVGGVNTNNNNGAEMPIFIDRRPRGSWNGLSVICS 60

Query: 61  LLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 110
           ++R P S++SCFSQPHVNG DG+WVS EF +ISE+NHLMVSDSMRYAILM
Sbjct: 61  VVRAPLSLVSCFSQPHVNGADGVWVSSEFAQISEMNHLMVSDSMRYAILM 110

[Close]
BLAST of MELO3C018891 vs. TrEMBL
Match: A0A067KF26_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13803 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.0e-28
Identity = 66/112 (58.93%), Postives = 81/112 (72.32%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 60
           MWR  A +RRN+HN+RKSPRVADESM+GG     G    ++   +       GFS I+ +
Sbjct: 1   MWRSVARIRRNMHNLRKSPRVADESMFGGMNINNGTEFPIIFARETAGRQRIGFSAIFRI 60

Query: 61  LRTPFSILSCF-SQPHVNGVDGMWVSG--EFPRISEVNHLMVSDSMRYAILM 110
           +  PFS+LSCF SQPH NGVDG+WVSG  EF +ISE+NHLMV+DSMRYAILM
Sbjct: 61  VLAPFSLLSCFSSQPHANGVDGLWVSGRHEFAQISEMNHLMVNDSMRYAILM 112

[Close]
BLAST of MELO3C018891 vs. TrEMBL
Match: I3SRB2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.0e-26
Identity = 66/109 (60.55%), Postives = 77/109 (70.64%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 60
           MWRL AAV RNL N +KS RVADESM+  G D G R         R + +  GFS+IY++
Sbjct: 1   MWRLVAAVTRNLQNTKKSSRVADESMFEAGHDRGIR---------RSQHDWSGFSLIYAI 60

Query: 61  LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 110
           L  P SILSC S P  NGVDG WVSGEF +ISE+NH+MV+DSMRYAILM
Sbjct: 61  LHAPISILSCVSHPQANGVDGAWVSGEFSQISEMNHIMVNDSMRYAILM 100

[Close]
BLAST of MELO3C018891 vs. TAIR10
Match: AT5G35732.1 (AT5G35732.1 unknown protein)

HSP 1 Score: 109.4 bits (272), Expect = 1.4e-24
Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 60
           M ++ + +RRNL N+RKSPRVAD++       G G    VV +G R   NS        +
Sbjct: 1   MTQMLSVLRRNLQNLRKSPRVADDTELPSSTSGAG--PGVVANGRRDGFNSV-------I 60

Query: 61  LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 110
           +R PFSI+SCF+ P V+G DG+WVSG++  ISEVNHLMVSDSMRYAILM
Sbjct: 61  MRFPFSIISCFAVPRVSGTDGLWVSGDYGSISEVNHLMVSDSMRYAILM 100

[Close]
BLAST of MELO3C018891 vs. TAIR10
Match: AT2G04795.1 (AT2G04795.1 unknown protein)

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-21
Identity = 52/109 (47.71%), Postives = 68/109 (62.39%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 60
           M ++ + +RRNL N+RKSPRVADES           + +  V+GD   GN         +
Sbjct: 1   MLKMLSILRRNLQNLRKSPRVADESA----------LPSTTVNGDHGGGNGSNGG----I 60

Query: 61  LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 110
           ++ P SI+SCFS P V+  DG+WVSG++ R+SEVNHLMV D MRYA+LM
Sbjct: 61  MKFPLSIMSCFSVPRVSRADGVWVSGDYGRVSEVNHLMVCDGMRYALLM 95

[Close]
BLAST of MELO3C018891 vs. NCBI nr
Match: gi|659110985|ref|XP_008455515.1| (PREDICTED: uncharacterized protein LOC103495667 [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 3.2e-50
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 60
           MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL
Sbjct: 41  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 100

Query: 61  LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMR 105
           LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM S+  R
Sbjct: 101 LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 144

[Close]
BLAST of MELO3C018891 vs. NCBI nr
Match: gi|449453582|ref|XP_004144535.1| (PREDICTED: uncharacterized protein LOC101211016 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 6.7e-48
Identity = 98/104 (94.23%), Postives = 99/104 (95.19%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 60
           MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRV AV VDGDRREGNSYGFSMIYSL
Sbjct: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAV-VDGDRREGNSYGFSMIYSL 60

Query: 61  LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMR 105
           LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM S+  R
Sbjct: 61  LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 103

[Close]
BLAST of MELO3C018891 vs. NCBI nr
Match: gi|700188211|gb|KGN43444.1| (hypothetical protein Csa_7G037480 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 4.7e-33
Identity = 73/79 (92.41%), Postives = 74/79 (93.67%), Query Frame = 1 

Query: 26  MYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVS 85
           MYGGGVDGGGRV AV VDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVS
Sbjct: 1   MYGGGVDGGGRVGAV-VDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVS 60

Query: 86  GEFPRISEVNHLMVSDSMR 105
           GEFPRISEVNHLM S+  R
Sbjct: 61  GEFPRISEVNHLMQSNLWR 78

[Close]
BLAST of MELO3C018891 vs. NCBI nr
Match: gi|731409715|ref|XP_010657294.1| (PREDICTED: uncharacterized protein LOC100267059 [Vitis vinifera])

HSP 1 Score: 139.0 bits (349), Expect = 4.8e-30
Identity = 68/109 (62.39%), Postives = 81/109 (74.31%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 60
           MW + AA+RRN  NIRKSPRVADE+M+GGG      +     D +RR     GFS +YS+
Sbjct: 1   MWHMLAAMRRNFQNIRKSPRVADENMFGGG--NQAELPIFGRDMERRARGWDGFSAVYSI 60

Query: 61  LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 110
           +R P S+LSCFS PHVNG DG+WVSG+F  ISE+NHLMVSDSMRYAILM
Sbjct: 61  VRVPLSLLSCFSHPHVNGADGVWVSGDFAHISEMNHLMVSDSMRYAILM 107

[Close]
BLAST of MELO3C018891 vs. NCBI nr
Match: gi|1009128082|ref|XP_015881037.1| (PREDICTED: uncharacterized protein LOC107416995 [Ziziphus jujuba])

HSP 1 Score: 135.2 bits (339), Expect = 7.0e-29
Identity = 67/110 (60.91%), Postives = 82/110 (74.55%), Query Frame = 1 

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGG-GVDGGGRVAAVVVDGDRREGNSYGFSMIYS 60
           M R+  ++R+N  NI KSPRVADESMYGG G  GGG +  +    +RR     GF ++YS
Sbjct: 2   MGRVLGSLRQNFQNIGKSPRVADESMYGGVGGGGGGNIEIM----ERRRSGWKGFLIVYS 61

Query: 61  LLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 110
           ++R PFS+ SCFS PHVNG DG+W SGEF +ISE+NHLMVSDSMRYAILM
Sbjct: 62  VVRAPFSLFSCFSHPHVNGADGVWASGEFAQISEMNHLMVSDSMRYAILM 107

The following BLAST results are available for this feature:
BLAST of MELO3C018891 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K391_CUCSA3.2e-3392.41Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037480 PE=4 SV=1[more]
F6HII7_VITVI3.4e-3062.39Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02120 PE=4 SV=... [more]
A0A061DMU7_THECC1.1e-2860.91Uncharacterized protein OS=Theobroma cacao GN=TCM_002274 PE=4 SV=1[more]
A0A067KF26_JATCU7.0e-2858.93Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13803 PE=4 SV=1[more]
I3SRB2_LOTJA1.0e-2660.55Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
BLAST of MELO3C018891 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G35732.11.4e-2453.21 unknown protein[more]
AT2G04795.11.5e-2147.71 unknown protein[more]
BLAST of MELO3C018891 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110985|ref|XP_008455515.1|3.2e-5096.15PREDICTED: uncharacterized protein LOC103495667 [Cucumis melo][more]
gi|449453582|ref|XP_004144535.1|6.7e-4894.23PREDICTED: uncharacterized protein LOC101211016 [Cucumis sativus][more]
gi|700188211|gb|KGN43444.1|4.7e-3392.41hypothetical protein Csa_7G037480 [Cucumis sativus][more]
gi|731409715|ref|XP_010657294.1|4.8e-3062.39PREDICTED: uncharacterized protein LOC100267059 [Vitis vinifera][more]
gi|1009128082|ref|XP_015881037.1|7.0e-2960.91PREDICTED: uncharacterized protein LOC107416995 [Ziziphus jujuba][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU51896melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018891T1MELO3C018891T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU51896MU51896transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018891Csa7G037480Cucumber (Chinese Long) v2cumeB530
MELO3C018891Cla015658Watermelon (97103) v1mewmB241
MELO3C018891ClCG02G002530Watermelon (Charleston Gray)mewcgB195
MELO3C018891Cla97C02G029010Watermelon (97103) v2mewmbB178
MELO3C018891CSPI06G08990Wild cucumber (PI 183967)cpimeB457
MELO3C018891CSPI07G02960Wild cucumber (PI 183967)cpimeB538
MELO3C018891Cucsa.180980Cucumber (Gy14) v1cgymeB327
MELO3C018891Cucsa.120440Cucumber (Gy14) v1cgymeB183
MELO3C018891CmaCh19G008820Cucurbita maxima (Rimu)cmameB461
MELO3C018891CmaCh11G012720Cucurbita maxima (Rimu)cmameB094
MELO3C018891CmoCh11G018500Cucurbita moschata (Rifu)cmomeB090
MELO3C018891CmoCh19G008950Cucurbita moschata (Rifu)cmomeB452
MELO3C018891Lsi11G013770Bottle gourd (USVL1VR-Ls)lsimeB095
MELO3C018891Cp4.1LG15g07070Cucurbita pepo (Zucchini)cpemeB223
MELO3C018891Cp4.1LG04g03990Cucurbita pepo (Zucchini)cpemeB609
MELO3C018891CsGy6G009110Cucumber (Gy14) v2cgybmeB402
MELO3C018891Carg18060Silver-seed gourdcarmeB1033
MELO3C018891Carg04163Silver-seed gourdcarmeB0199
MELO3C018891CsaV3_6G009360Cucumber (Chinese Long) v3cucmeB469
MELO3C018891CsaV3_7G002850Cucumber (Chinese Long) v3cucmeB548
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
MELO3C018891MELO3C019368Melon (DHL92) v3.5.1memeB041
The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018891Wild cucumber (PI 183967)cpimeB535
MELO3C018891Cucurbita pepo (Zucchini)cpemeB273
MELO3C018891Bottle gourd (USVL1VR-Ls)lsimeB067
MELO3C018891Cucumber (Gy14) v2cgybmeB467
MELO3C018891Cucumber (Gy14) v2cgybmeB468
MELO3C018891Cucumber (Chinese Long) v3cucmeB547
MELO3C018891Wax gourdmewgoB212
MELO3C018891Wax gourdmewgoB235