CSPI07G02960 (gene) Wild cucumber (PI 183967)

NameCSPI07G02960
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionAt5g35732
LocationChr7 : 2415037 .. 2417731 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGCGGTTGGCGGCGGCAGTTAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGCGGAGTTGACGGTGGCGGAAGGGTGGGGGCGGTGGTGGACGGTGACCGAAGAGAAGGTAATTCATATGGGTTTTCTATGATTTACAGCCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTTTCTCAACCACACGTTAATGGGGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATATTAATGTAAATAAAATAAATAAATGGGGTTTCTTCCTCCTCTGTAGTAATTTCGATTGGATCTGGTTTTCAAAAAGAGTCACAAATCGAATGCTATAGAATTATTAATTGGTATCATATACTTTGATCGGTTTTACTTTTTCTTTTTTCTTTTTTGTTTCCTTTTTGTGTTAGAATATTGTATAACAAATTGTGGGTGTGTAACGTTACAGTCAGTTATGCTTGAATTGACGGTTTAAAATTGACTTGAATTTTGAAATTTAGTGATCTTATGTGTACGTATATGTTCTTGTATACAATAATGTATTAGTTCAAAAGTTACACAAAAGAGTTTGAATGTAATAACTTTTGTATATTTTGTTTTTAATTTGAATTAGAAGCACATAGGGATTCAAAAACCATGTGCCTACTAAAAGCTTGAATGAAATGACAATAACATTCTAATTTGTCTCAGCTCATAAAAAAAAATGAATCAAAAGAGAAGTTAAAAAGAAAAAGTAAATTTATTTGAGTGTAATGATATGATTCATTTGCTTTGAGCGAATCAACAGAATCTCTTCAATAAAAAACAACAAAAAAAAAGCGATTATCGTCACTTTGGTTGCTTCTATTAAATTACGATGGTTAAACTATTAATTGAAGTTGTCTAGAAGTATTCTTTTTTTTACAAAAAAAAACAATAATAATAGGCGAAAAAACAAATGTATTTGGGAGTTGGATGAGTGGTCAAAATTGAACGTAGATCCAAAGTGATGATAAGTTGAAGAGGTAAATGGGGAAGTTTTCTTTTTAGGGGTTATTGGGTGCATAATAATTAGGTGGGAAGAATAACAAAATAAATTAAAAAGAGAGTCAACAGCCTCCAACTTTGGTTTTAATGGGGACTAATGTGCACTTGTGTAGTGGTGGGAGTAGTGGTAGTGACTACCACTCTTCTCTTATACAATGTAACTATCCATCTCTCTTTCTTTGTTTTTTTCTTTAAAAATTGAATCTTATTATTATTACTCTCTCAACCTCTCAATATATTCTTCACTATATTCATGTGTTGTGGGGAAGGATTTCTTTTGATTTCTTTTGGGTTTGGTCTAAATTTTTTATTCATGCTCCACAAATAGAGAACACTTATTTATTATTAAACCAAACCCCTTCTTTGGTGGTAGTTTCTCTTATGCTAATTCTCTGGCCAACAAATCATATCTAAAGATTTCCATAAGGGAATCTTTGGTTCTCTATTTGGGTTATAAAAAAAAATTGACTAGTTTGAGTTCTTGTTTTGAAGTTTAAAATTTGTCTTTAAGTTGTAATTATTAAGAAAATTAATGAATTAATGTCACGTTAAAATAAGTTAGCTACATGTATTTATAGCTTCTTTCACCTTTTTATGTTTTTAATTTTTGTAGAGATTATGACACAAAATAAAAATAGATACCAAAACAAACCCTAAATTTTGGAGAAAATTTTACCAAATTGTACTATGTACTTATGAACATCACATCAAGGATGGAATTTTAGTAAGATAATTATTAATTTATTAAAAGCATGCTTAAGATAAAGGCTAGCTATATAGCTATAGCAAAGAAGTAGATTTAAGTGTTTAAAAATTATATGAAGACACAAACTTTATACTTTTTCTCTTTCAAAAAAGTAATTGAATTAATTATTTATAAAAATATCACATTTTTTTAAAAACATTCATTGTCGTGATGTGAATTAGTGATTTACTTTAGAAAAGAAAAGGACAATATGGTCCGTAACAATTTGTTTATCATTAATATAAAAGTTAATAATATCGAAAAATAAATTAACCAACCATATAATGTAATTAATTTATTAAATTTTGAATTGAGTAAAAAAATGACTTCTTTGTAATAATCATTATATAGGTTAGAATAATTTCTTGTATAATATTAAATGATCAAGTATGAAATTTTCGTTATGGTGAGATTTTGATCTATTTACGTTTTTGATGATCCTTGACATAAACTCTAAAAAAATATGTATCGTTAGCTATATTTGCTTATAATTGCTTACAAGTGCTCTAATTTCTTTTACTATCCTTCAATTTTTTCCTCTTTAAATTTCTAATTGCAAATGGGATTTATATAATTATAGTGGTTTTGTGAATAGCACTTTGTTTCATGTGCATATTGCATTAATTTATAAGTATAAACATATGAAAATTATGATAGAAATGGCCATTGGACGTTCCCAAATATAAAATGATTTTTTTTTTTCTATCTTGCTTCCACTATTACTTTCTTGTCTTTTCATTCTTTTCTTTTCTTTTTTTTTTTTCTCAGCAATCAAACCTTTGGAGAAAAGTTAAAAGGGATAAGTGGGAAAACAGTGGAATGGGAGACCAAGAAAATGATTGA

mRNA sequence

ATGTGGCGGTTGGCGGCGGCAGTTAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGCGGAGTTGACGGTGGCGGAAGGGTGGGGGCGGTGGTGGACGGTGACCGAAGAGAAGGTAATTCATATGGGTTTTCTATGATTTACAGCCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTTTCTCAACCACACGTTAATGGGGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGCAATCAAACCTTTGGAGAAAAGTTAAAAGGGATAAGTGGGAAAACAGTGGAATGGGAGACCAAGAAAATGATTGA

Coding sequence (CDS)

ATGTGGCGGTTGGCGGCGGCAGTTAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGCGGAGTTGACGGTGGCGGAAGGGTGGGGGCGGTGGTGGACGGTGACCGAAGAGAAGGTAATTCATATGGGTTTTCTATGATTTACAGCCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTTTCTCAACCACACGTTAATGGGGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGCAATCAAACCTTTGGAGAAAAGTTAAAAGGGATAAGTGGGAAAACAGTGGAATGGGAGACCAAGAAAATGATTGA
BLAST of CSPI07G02960 vs. TrEMBL
Match: A0A0A0K391_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037480 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 5.5e-50
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1

Query: 26  MYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSG 85
           MYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSG
Sbjct: 1   MYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSG 60

Query: 86  EFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEND 122
           EFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEND
Sbjct: 61  EFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEND 96

BLAST of CSPI07G02960 vs. TrEMBL
Match: F6HII7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02120 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-24
Identity = 61/107 (57.01%), Postives = 74/107 (69.16%), Query Frame = 1

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGG----GRVGAVVDGDRREGNSYGFSMI 60
           MW + AA+RRN  NIRKSPRVADE+M+GGG        GR     D +RR     GFS +
Sbjct: 1   MWHMLAAMRRNFQNIRKSPRVADENMFGGGNQAELPIFGR-----DMERRARGWDGFSAV 60

Query: 61  YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 104
           YS++R P S+LSCFS PHVNG DG+WVSG+F  ISE+NHLM S+  R
Sbjct: 61  YSIVRVPLSLLSCFSHPHVNGADGVWVSGDFAHISEMNHLMVSDSMR 102

BLAST of CSPI07G02960 vs. TrEMBL
Match: A0A061DMU7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002274 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.9e-22
Identity = 57/106 (53.77%), Postives = 74/106 (69.81%), Query Frame = 1

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGG---GVDGGGRVGAVVDGDRREGNSYGFSMIY 60
           MWR+   +RRNL NI+KSPRVADE+M GG     + G  +   +D  R  G+  G S+I 
Sbjct: 1   MWRMLVVLRRNLQNIKKSPRVADENMVGGVNTNNNNGAEMPIFIDR-RPRGSWNGLSVIC 60

Query: 61  SLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 104
           S++R P S++SCFSQPHVNG DG+WVS EF +ISE+NHLM S+  R
Sbjct: 61  SVVRAPLSLVSCFSQPHVNGADGVWVSSEFAQISEMNHLMVSDSMR 105

BLAST of CSPI07G02960 vs. TrEMBL
Match: A0A067KF26_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13803 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.7e-22
Identity = 57/107 (53.27%), Postives = 74/107 (69.16%), Query Frame = 1

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGG-GVDGGGRVGAVVDGDRREGNSYGFSMIYSL 60
           MWR  A +RRN+HN+RKSPRVADESM+GG  ++ G     +   +       GFS I+ +
Sbjct: 1   MWRSVARIRRNMHNLRKSPRVADESMFGGMNINNGTEFPIIFARETAGRQRIGFSAIFRI 60

Query: 61  LRTPFSILSCF-SQPHVNGVDGMWVSG--EFPRISEVNHLMQSNLWR 104
           +  PFS+LSCF SQPH NGVDG+WVSG  EF +ISE+NHLM ++  R
Sbjct: 61  VLAPFSLLSCFSSQPHANGVDGLWVSGRHEFAQISEMNHLMVNDSMR 107

BLAST of CSPI07G02960 vs. TrEMBL
Match: I3SRB2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-21
Identity = 57/103 (55.34%), Postives = 69/103 (66.99%), Query Frame = 1

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL 60
           MWRL AAV RNL N +KS RVADESM+  G D G R        R + +  GFS+IY++L
Sbjct: 1   MWRLVAAVTRNLQNTKKSSRVADESMFEAGHDRGIR--------RSQHDWSGFSLIYAIL 60

Query: 61  RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 104
             P SILSC S P  NGVDG WVSGEF +ISE+NH+M ++  R
Sbjct: 61  HAPISILSCVSHPQANGVDGAWVSGEFSQISEMNHIMVNDSMR 95

BLAST of CSPI07G02960 vs. TAIR10
Match: AT5G35732.1 (AT5G35732.1 unknown protein)

HSP 1 Score: 92.0 bits (227), Expect = 2.6e-19
Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 1

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL 60
           M ++ + +RRNL N+RKSPRVAD++       G G  G V +G R   NS        ++
Sbjct: 1   MTQMLSVLRRNLQNLRKSPRVADDTELPSSTSGAGP-GVVANGRRDGFNSV-------IM 60

Query: 61  RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 104
           R PFSI+SCF+ P V+G DG+WVSG++  ISEVNHLM S+  R
Sbjct: 61  RFPFSIISCFAVPRVSGTDGLWVSGDYGSISEVNHLMVSDSMR 95

BLAST of CSPI07G02960 vs. TAIR10
Match: AT2G04795.1 (AT2G04795.1 unknown protein)

HSP 1 Score: 84.7 bits (208), Expect = 4.2e-17
Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 1

Query: 1  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL 60
          M ++ + +RRNL N+RKSPRVADES               V+GD   GN         ++
Sbjct: 1  MLKMLSILRRNLQNLRKSPRVADESALPS---------TTVNGDHGGGNGSNGG----IM 60

Query: 61 RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM 98
          + P SI+SCFS P V+  DG+WVSG++ R+SEVNHLM
Sbjct: 61 KFPLSIMSCFSVPRVSRADGVWVSGDYGRVSEVNHLM 84

BLAST of CSPI07G02960 vs. NCBI nr
Match: gi|449453582|ref|XP_004144535.1| (PREDICTED: uncharacterized protein LOC101211016 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 8.7e-65
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL 60
           MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL
Sbjct: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL 60

Query: 61  RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEN 120
           RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEN
Sbjct: 61  RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEN 120

Query: 121 D 122
           D
Sbjct: 121 D 121

BLAST of CSPI07G02960 vs. NCBI nr
Match: gi|659110985|ref|XP_008455515.1| (PREDICTED: uncharacterized protein LOC103495667 [Cucumis melo])

HSP 1 Score: 247.7 bits (631), Expect = 1.1e-62
Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 1

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAV-VDGDRREGNSYGFSMIYSL 60
           MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRV AV VDGDRREGNSYGFSMIYSL
Sbjct: 41  MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 100

Query: 61  LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQE 120
           LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQE
Sbjct: 101 LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQE 160

Query: 121 ND 122
           ND
Sbjct: 161 ND 162

BLAST of CSPI07G02960 vs. NCBI nr
Match: gi|700188211|gb|KGN43444.1| (hypothetical protein Csa_7G037480 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 7.9e-50
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1

Query: 26  MYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSG 85
           MYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSG
Sbjct: 1   MYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSG 60

Query: 86  EFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEND 122
           EFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEND
Sbjct: 61  EFPRISEVNHLMQSNLWRKVKRDKWENSGMGDQEND 96

BLAST of CSPI07G02960 vs. NCBI nr
Match: gi|731409715|ref|XP_010657294.1| (PREDICTED: uncharacterized protein LOC100267059 [Vitis vinifera])

HSP 1 Score: 120.2 bits (300), Expect = 2.6e-24
Identity = 61/107 (57.01%), Postives = 74/107 (69.16%), Query Frame = 1

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGG----GRVGAVVDGDRREGNSYGFSMI 60
           MW + AA+RRN  NIRKSPRVADE+M+GGG        GR     D +RR     GFS +
Sbjct: 1   MWHMLAAMRRNFQNIRKSPRVADENMFGGGNQAELPIFGR-----DMERRARGWDGFSAV 60

Query: 61  YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 104
           YS++R P S+LSCFS PHVNG DG+WVSG+F  ISE+NHLM S+  R
Sbjct: 61  YSIVRVPLSLLSCFSHPHVNGADGVWVSGDFAHISEMNHLMVSDSMR 102

BLAST of CSPI07G02960 vs. NCBI nr
Match: gi|1009128082|ref|XP_015881037.1| (PREDICTED: uncharacterized protein LOC107416995 [Ziziphus jujuba])

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-23
Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 1

Query: 1   MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL 60
           M R+  ++R+N  NI KSPRVADESMYGG   GGG  G +   +RR     GF ++YS++
Sbjct: 2   MGRVLGSLRQNFQNIGKSPRVADESMYGGVGGGGG--GNIEIMERRRSGWKGFLIVYSVV 61

Query: 61  RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 104
           R PFS+ SCFS PHVNG DG+W SGEF +ISE+NHLM S+  R
Sbjct: 62  RAPFSLFSCFSHPHVNGADGVWASGEFAQISEMNHLMVSDSMR 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K391_CUCSA5.5e-50100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037480 PE=4 SV=1[more]
F6HII7_VITVI1.8e-2457.01Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02120 PE=4 SV=... [more]
A0A061DMU7_THECC2.9e-2253.77Uncharacterized protein OS=Theobroma cacao GN=TCM_002274 PE=4 SV=1[more]
A0A067KF26_JATCU3.7e-2253.27Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13803 PE=4 SV=1[more]
I3SRB2_LOTJA1.9e-2155.34Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G35732.12.6e-1947.57 unknown protein[more]
AT2G04795.14.2e-1745.36 unknown protein[more]
Match NameE-valueIdentityDescription
gi|449453582|ref|XP_004144535.1|8.7e-65100.00PREDICTED: uncharacterized protein LOC101211016 [Cucumis sativus][more]
gi|659110985|ref|XP_008455515.1|1.1e-6298.36PREDICTED: uncharacterized protein LOC103495667 [Cucumis melo][more]
gi|700188211|gb|KGN43444.1|7.9e-50100.00hypothetical protein Csa_7G037480 [Cucumis sativus][more]
gi|731409715|ref|XP_010657294.1|2.6e-2457.01PREDICTED: uncharacterized protein LOC100267059 [Vitis vinifera][more]
gi|1009128082|ref|XP_015881037.1|1.3e-2356.31PREDICTED: uncharacterized protein LOC107416995 [Ziziphus jujuba][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G02960.1CSPI07G02960.1mRNA


The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI07G02960CSPI06G08990Wild cucumber (PI 183967)cpicpiB189