Carg16090 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCACTACAACTGAATTCCCCATCTACGCCGTCGCCAATCACCACCACCATCGCCGCCCTGCTGCTCACCGCACCATCGCCGCCGTCTTCAGCATCATTCGTGCCCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCAACCGTTCACTCCTCCGCCGACACCTTCTGGCTCTCCACCGATCACTATTTTGCCTCCACCATTTCCGAGACCAACCACCTTATGGTAAGCGACGGCATGCGTTACGCCATGTTGATGTAG ATGTTCACTACAACTGAATTCCCCATCTACGCCGTCGCCAATCACCACCACCATCGCCGCCCTGCTGCTCACCGCACCATCGCCGCCGTCTTCAGCATCATTCGTGCCCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCAACCGTTCACTCCTCCGCCGACACCTTCTGGCTCTCCACCGATCACTATTTTGCCTCCACCATTTCCGAGACCAACCACCTTATGGTAAGCGACGGCATGCGTTACGCCATGTTGATGTAG ATGTTCACTACAACTGAATTCCCCATCTACGCCGTCGCCAATCACCACCACCATCGCCGCCCTGCTGCTCACCGCACCATCGCCGCCGTCTTCAGCATCATTCGTGCCCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCAACCGTTCACTCCTCCGCCGACACCTTCTGGCTCTCCACCGATCACTATTTTGCCTCCACCATTTCCGAGACCAACCACCTTATGGTAAGCGACGGCATGCGTTACGCCATGTTGATGTAG MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
BLAST of Carg16090 vs. NCBI nr
Match: XP_022944204.1 (uncharacterized protein LOC111448722 [Cucurbita moschata]) HSP 1 Score: 152.1 bits (383), Expect = 8.4e-34 Identity = 80/86 (93.02%), Postives = 80/86 (93.02%), Query Frame = 0
BLAST of Carg16090 vs. NCBI nr
Match: XP_022985817.1 (uncharacterized protein LOC111483748 [Cucurbita maxima]) HSP 1 Score: 149.4 bits (376), Expect = 5.4e-33 Identity = 81/86 (94.19%), Postives = 82/86 (95.35%), Query Frame = 0
BLAST of Carg16090 vs. NCBI nr
Match: XP_023513038.1 (uncharacterized protein LOC111777603 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 140.2 bits (352), Expect = 3.3e-30 Identity = 81/87 (93.10%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Carg16090 vs. NCBI nr
Match: XP_011656875.1 (PREDICTED: uncharacterized protein LOC105435779 [Cucumis sativus] >KGN46586.1 hypothetical protein Csa_6G110050 [Cucumis sativus]) HSP 1 Score: 112.1 bits (279), Expect = 9.6e-22 Identity = 61/88 (69.32%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of Carg16090 vs. NCBI nr
Match: XP_008455967.1 (PREDICTED: uncharacterized protein LOC103496030 [Cucumis melo]) HSP 1 Score: 109.8 bits (273), Expect = 4.8e-21 Identity = 61/88 (69.32%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Carg16090 vs. TAIR10
Match: AT5G35732.1 (unknown protein) HSP 1 Score: 58.9 bits (141), Expect = 1.7e-09 Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of Carg16090 vs. TAIR10
Match: AT2G04795.1 (unknown protein) HSP 1 Score: 54.7 bits (130), Expect = 3.3e-08 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of Carg16090 vs. TrEMBL
Match: tr|A0A0A0KFS1|A0A0A0KFS1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G110050 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 6.4e-22 Identity = 61/88 (69.32%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of Carg16090 vs. TrEMBL
Match: tr|A0A1S3C290|A0A1S3C290_CUCME (uncharacterized protein LOC103496030 OS=Cucumis melo OX=3656 GN=LOC103496030 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 3.2e-21 Identity = 61/88 (69.32%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Carg16090 vs. TrEMBL
Match: tr|A0A199UAJ2|A0A199UAJ2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_S071500 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.4e-07 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of Carg16090 vs. TrEMBL
Match: tr|A0A118K0Z8|A0A118K0Z8_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_019653 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 9.8e-07 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Carg16090 vs. TrEMBL
Match: tr|A0A2P5QJV5|A0A2P5QJV5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA23474 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|