CsGy4G006970 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G006970
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	VQ motif-containing protein 22-like
Location	Chr4 : 5075224 .. 5075874 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGGCGATTGGCTTCAATTTTACCATCAAAATCTCTCTTCCACGGCGGCGCCACCACCTTCCGATCATTCCACCTCCGAAATGTTCTTCGTCGATCGAGTTTCTGACGCCACCGGGGTTATCACCACCACCGCCTCCGTCAACACGCTTGGTTCCACTGGATTGAACCCGGAAGGTCGTGTAGGAAAGCCGGTTCGTCGCCGGTCCAGGGCATCTCGGCGGACTCCGACCACGTTGCTCAACACGGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACTGGCGGTCCAACTCCACCTTTCACCTCATCCATTTCCCCCAATTTCTCCTTAGGGTTCGGCGGGATTCATCAATCCAATTTCCCCACTTCCCAGAACGCCACGATTTCTCCGCCGCCCTCTGGTTACCTATTACAACAACCACCACAGTTGTACAATCACAATCCTCAACAGTTCATGTTTCCGACAGTCGCACATGGCGGCGATTTTCTTCAGAGGCTATCCGCGCCAAGGCCGGCTAATGGCGCAGTTGCTGGAGACGGATTTCTGATCGAAAGTGCGGTTTCTTCTCAAATTCCTCCCGCTGGAGCTTCTGCAGATTCCTCCAACGAGAGCAATGGGGGTAATGGCCGCTTACTGTTCTGA

mRNA sequence

ATGTCCGGCGATTGGCTTCAATTTTACCATCAAAATCTCTCTTCCACGGCGGCGCCACCACCTTCCGATCATTCCACCTCCGAAATGTTCTTCGTCGATCGAGTTTCTGACGCCACCGGGGTTATCACCACCACCGCCTCCGTCAACACGCTTGGTTCCACTGGATTGAACCCGGAAGGTCGTGTAGGAAAGCCGGTTCGTCGCCGGTCCAGGGCATCTCGGCGGACTCCGACCACGTTGCTCAACACGGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACTGGCGGTCCAACTCCACCTTTCACCTCATCCATTTCCCCCAATTTCTCCTTAGGGTTCGGCGGGATTCATCAATCCAATTTCCCCACTTCCCAGAACGCCACGATTTCTCCGCCGCCCTCTGGTTACCTATTACAACAACCACCACAGTTGTACAATCACAATCCTCAACAGTTCATGTTTCCGACAGTCGCACATGGCGGCGATTTTCTTCAGAGGCTATCCGCGCCAAGGCCGGCTAATGGCGCAGTTGCTGGAGACGGATTTCTGATCGAAAGTGCGGTTTCTTCTCAAATTCCTCCCGCTGGAGCTTCTGCAGATTCCTCCAACGAGAGCAATGGGGGTAATGGCCGCTTACTGTTCTGA

Coding sequence (CDS)

ATGTCCGGCGATTGGCTTCAATTTTACCATCAAAATCTCTCTTCCACGGCGGCGCCACCACCTTCCGATCATTCCACCTCCGAAATGTTCTTCGTCGATCGAGTTTCTGACGCCACCGGGGTTATCACCACCACCGCCTCCGTCAACACGCTTGGTTCCACTGGATTGAACCCGGAAGGTCGTGTAGGAAAGCCGGTTCGTCGCCGGTCCAGGGCATCTCGGCGGACTCCGACCACGTTGCTCAACACGGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACTGGCGGTCCAACTCCACCTTTCACCTCATCCATTTCCCCCAATTTCTCCTTAGGGTTCGGCGGGATTCATCAATCCAATTTCCCCACTTCCCAGAACGCCACGATTTCTCCGCCGCCCTCTGGTTACCTATTACAACAACCACCACAGTTGTACAATCACAATCCTCAACAGTTCATGTTTCCGACAGTCGCACATGGCGGCGATTTTCTTCAGAGGCTATCCGCGCCAAGGCCGGCTAATGGCGCAGTTGCTGGAGACGGATTTCTGATCGAAAGTGCGGTTTCTTCTCAAATTCCTCCCGCTGGAGCTTCTGCAGATTCCTCCAACGAGAGCAATGGGGGTAATGGCCGCTTACTGTTCTGA

Protein sequence

MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVAGDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF

Homology

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BLAST of CsGy4G006970 vs. NCBI nr
Match: XP_011653250.1 (PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus])

HSP 1 Score: 430.3 bits (1105), Expect = 4.0e-117
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEG 60
           MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEG
Sbjct: 1   MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEG 60

Query: 61  RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQ 120
           RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQ
Sbjct: 61  RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQ 120

Query: 121 SNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVA 180
           SNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVA
Sbjct: 121 SNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVA 180

Query: 181 GDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 217
           GDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF
Sbjct: 181 GDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 216

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BLAST of CsGy4G006970 vs. NCBI nr
Match: KGN53485.1 (hypothetical protein Csa_4G056730 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 3.6e-102
Identity = 193/209 (92.34%), Postives = 196/209 (93.78%), Query Frame = 0


Query: 1   MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEG 60
           MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEG
Sbjct: 1   MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEG 60

Query: 61  RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQ 120
           RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQ
Sbjct: 61  RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQ 120

Query: 121 SNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVA 180
           SNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVA
Sbjct: 121 SNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVA 180

Query: 181 GDGFLIESAVSSQIPPAGASADSSNESNG 210
           GDGFLIESA+         +A  S+E  G
Sbjct: 181 GDGFLIESAIPPTRAMGVMAAYCSDEEEG 209

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BLAST of CsGy4G006970 vs. NCBI nr
Match: XP_008451884.1 (PREDICTED: VQ motif-containing protein 22-like [Cucumis melo])

HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97
Identity = 189/216 (87.50%), Postives = 190/216 (87.96%), Query Frame = 0


Query: 1   MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEG 60
           MSGDWLQFYHQNLS            SEM F DRVSDA      TAS NTLGSTGLNPEG
Sbjct: 1   MSGDWLQFYHQNLSXXXXXXXXXXXXSEMIFADRVSDA------TASANTLGSTGLNPEG 60

Query: 61  RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQ 120
           RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGI Q
Sbjct: 61  RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIRQ 120

Query: 121 SNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVA 180
           SNF TSQNA ISPPPSGYLLQQPPQLYNHNPQ F+FPTVAHGGDFLQRLSAPRPANG VA
Sbjct: 121 SNFSTSQNAAISPPPSGYLLQQPPQLYNHNPQPFVFPTVAHGGDFLQRLSAPRPANGGVA 180

Query: 181 GDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 217
           GDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF
Sbjct: 181 GDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 210

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BLAST of CsGy4G006970 vs. NCBI nr
Match: XP_022982664.1 (VQ motif-containing protein 22-like [Cucurbita maxima])

HSP 1 Score: 290.4 bits (742), Expect = 4.9e-75
Identity = 159/217 (73.27%), Postives = 174/217 (80.18%), Query Frame = 0


Query: 3   GDWLQFYHQNLSSTAAPPPSDHSTSE-MFFVDRVSDATGVITTTASV--NTLGSTGLNPE 62
           GDWLQFYHQNLS+TA PPPSD  TS    F +RVSDAT V TT+A++  ++ G+TGLNPE
Sbjct: 5   GDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNTGLNPE 64

Query: 63  GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIH 122
           GRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT    SSISPNF LGF GI 
Sbjct: 65  GRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSSASSISPNFPLGFRGIC 124

Query: 123 QSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAV 182
           QSNF T  NA IS PPS YL  Q PQ Y+ +PQ FMFP  AHGGDFLQR+S  RPAN  V
Sbjct: 125 QSNFGTPPNAVIS-PPSDYL--QLPQFYHSHPQPFMFPAAAHGGDFLQRISVARPANDGV 184

Query: 183 AGDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 217
           AGDGFL+ESAVSSQIP  GASADSSN++N GNG  LF
Sbjct: 185 AGDGFLMESAVSSQIPTTGASADSSNKTNHGNGASLF 218

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BLAST of CsGy4G006970 vs. NCBI nr
Match: XP_023552946.1 (VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66
Identity = 144/210 (68.57%), Postives = 155/210 (73.81%), Query Frame = 0


Query: 3   GDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEGRV 62
           GDWLQFYHQNL +TAAPPPSD STSEM FVDRVSDA       AS NT  STGLNPE RV
Sbjct: 5   GDWLQFYHQNLPTTAAPPPSDQSTSEMIFVDRVSDA------IASANTGASTGLNPERRV 64

Query: 63  GKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQSN 122
            KP             TLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLGFG I QS 
Sbjct: 65  AKPXXXXXXXXXXXXXTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGFGAIPQS- 124

Query: 123 FPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVAGD 182
                N+ +  PPSGY    P Q Y+HNPQ F+ P  AHGG+FLQRLSA +P NG VA D
Sbjct: 125 -----NSGMISPPSGY----PLQFYHHNPQPFVIPASAHGGEFLQRLSAAKPGNGGVAAD 184

Query: 183 GFLIESAVSSQIPPAGASADSSNESNGGNG 213
           GFL+ESAVSSQIPP GA+ADSSN+SNGG+G
Sbjct: 185 GFLMESAVSSQIPPTGATADSSNKSNGGSG 198

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BLAST of CsGy4G006970 vs. TAIR10
Match: AT3G22160.1 (VQ motif-containing protein)

HSP 1 Score: 81.6 bits (200), Expect = 6.3e-16
Identity = 53/103 (51.46%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 56  LNPE-GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLG 115
           L+PE GRV KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP+           ++ 
Sbjct: 43  LSPETGRVTKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPS-----------AMA 102

Query: 116 FGGIHQSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFP 158
           FG     N  ++ + T S  PS    QQ P  YN  P   + P
Sbjct: 103 FG---SGNTTSAFSLTSSSDPSAGSSQQAPWQYNFQPHAPLQP 131

[Close]

BLAST of CsGy4G006970 vs. TAIR10
Match: AT4G39720.1 (VQ motif-containing protein)

HSP 1 Score: 62.0 bits (149), Expect = 5.2e-10
Identity = 60/173 (34.68%), Postives = 79/173 (45.66%), Query Frame = 0


Query: 53  STGLNPEGRVG--KPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSIS-- 112
           ++ L P   +G  K  ++RSRASRR PTT+L TDT+NFRAMVQ+FTG P PP  ++ S  
Sbjct: 99  TSSLPPTNNIGVIKKTKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPLFNNNSIV 158

Query: 113 ----PNFSLGFGGIHQSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGD 172
                N  LG      + + T  N  +  P +  L    P L     QQ+  P       
Sbjct: 159 NTTRLNTFLGLSSSSPNTYNT--NNLLLRPFAQKLTPATPLLSGSQIQQYQNPNNGFEDM 218

Query: 173 FLQRL-----SAPRPANGAVAGDGFLIESAVSSQIPPAGASADSSNESNGGNG 213
            LQ L     S PR       G G +      S  PP   +A + N + G NG
Sbjct: 219 NLQALLQAHISNPRSNEHDQFGLGMM---QTPSTNPPTTTAAANGNINTGDNG 266

[Close]

BLAST of CsGy4G006970 vs. TAIR10
Match: AT5G65170.1 (VQ motif-containing protein)

HSP 1 Score: 62.0 bits (149), Expect = 5.2e-10
Identity = 36/92 (39.13%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 15  STAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEGRVG--KPVRRRSRA 74
           S   PPP   S+ ++FF + +      +  T + + + S   + +  +   +  ++RSR 
Sbjct: 88  SRPVPPPI--SSEQVFFTNPLQQNLRTVPNTNTTSPICSVPTDKKNGLATTRNPKKRSRV 147

Query: 75  SRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFT 105
           SRR PTT+L TDT+NFRAMVQ+FTG P+ PFT
Sbjct: 148 SRRAPTTVLTTDTSNFRAMVQEFTGNPSTPFT 177

[Close]

BLAST of CsGy4G006970 vs. TAIR10
Match: AT4G15120.1 (VQ motif-containing protein)

HSP 1 Score: 58.2 bits (139), Expect = 7.5e-09
Identity = 50/111 (45.05%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 76  TPTTLLNTDTTNFRAMVQQFTGGPTP-PFTSSISPNFSLGFGGIHQSNFPTSQNATISPP 135
           TPTTL NTDT NFRAMVQQFTGGP+   F SS S  FSL       S+ PT   A +S  
Sbjct: 60  TPTTLFNTDTANFRAMVQQFTGGPSAVAFGSSPSSGFSL------TSSDPT---AGVSSS 119

Query: 136 PSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVAGDGFL 186
           P  Y   Q    +N   QQ   P +    + +  LS P     AVA DGF+
Sbjct: 120 PWQYANLQNQMAHNELMQQ-QRPYMFSSSNNVSTLSYP----NAVATDGFV 156

[Close]

BLAST of CsGy4G006970 vs. TAIR10
Match: AT4G20000.1 (VQ motif-containing protein)

HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 45 TASVNTLGSTGLNPEGRVGKPVRRRSRASRRT-PTTLLNTDTTNFRAMVQQFTG 98
          ++S ++LG  G       G    RRSRASRR  PTTLLN + +NFRA+VQ+FTG
Sbjct: 32 SSSGSSLGDGGAAAHEAAG----RRSRASRRAIPTTLLNANPSNFRALVQKFTG 81

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BLAST of CsGy4G006970 vs. Swiss-Prot
Match: sp|Q9LIE6|VQ22_ARATH (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 53/103 (51.46%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 56  LNPE-GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLG 115
           L+PE GRV KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP+           ++ 
Sbjct: 43  LSPETGRVTKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPS-----------AMA 102

Query: 116 FGGIHQSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFP 158
           FG     N  ++ + T S  PS    QQ P  YN  P   + P
Sbjct: 103 FG---SGNTTSAFSLTSSSDPSAGSSQQAPWQYNFQPHAPLQP 131

[Close]

BLAST of CsGy4G006970 vs. TrEMBL
Match: tr|A0A0A0KV74|A0A0A0KV74_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056730 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.4e-102
Identity = 193/209 (92.34%), Postives = 196/209 (93.78%), Query Frame = 0


Query: 1   MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEG 60
           MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEG
Sbjct: 1   MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEG 60

Query: 61  RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQ 120
           RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQ
Sbjct: 61  RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQ 120

Query: 121 SNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVA 180
           SNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVA
Sbjct: 121 SNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVA 180

Query: 181 GDGFLIESAVSSQIPPAGASADSSNESNG 210
           GDGFLIESA+         +A  S+E  G
Sbjct: 181 GDGFLIESAIPPTRAMGVMAAYCSDEEEG 209

[Close]

BLAST of CsGy4G006970 vs. TrEMBL
Match: tr|A0A1S3BTN7|A0A1S3BTN7_CUCME (VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103493042 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.4e-97
Identity = 189/216 (87.50%), Postives = 190/216 (87.96%), Query Frame = 0


Query: 1   MSGDWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNPEG 60
           MSGDWLQFYHQNLS            SEM F DRVSDA      TAS NTLGSTGLNPEG
Sbjct: 1   MSGDWLQFYHQNLSXXXXXXXXXXXXSEMIFADRVSDA------TASANTLGSTGLNPEG 60

Query: 61  RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIHQ 120
           RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGI Q
Sbjct: 61  RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIRQ 120

Query: 121 SNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAVA 180
           SNF TSQNA ISPPPSGYLLQQPPQLYNHNPQ F+FPTVAHGGDFLQRLSAPRPANG VA
Sbjct: 121 SNFSTSQNAAISPPPSGYLLQQPPQLYNHNPQPFVFPTVAHGGDFLQRLSAPRPANGGVA 180

Query: 181 GDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 217
           GDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF
Sbjct: 181 GDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 210

[Close]

BLAST of CsGy4G006970 vs. TrEMBL
Match: tr|A0A2I4FG60|A0A2I4FG60_9ROSI (VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108998517 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.8e-41
Identity = 115/227 (50.66%), Postives = 136/227 (59.91%), Query Frame = 0


Query: 1   MSG--DWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTG--- 60
           MSG  DWLQFYHQNL +    P   H  S     +RVSDAT V TT  S  TL S G   
Sbjct: 1   MSGPSDWLQFYHQNLPNQVTSP--GHPVSGALLDNRVSDATVVSTTVTSPTTLSSLGSGS 60

Query: 61  --------LNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSI 120
                   L+PEGRV KP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT PF S  
Sbjct: 61  SIPDTGGHLSPEGRVSKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTAPFASGA 120

Query: 121 ---SPNFSLGFGGIHQSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAH--- 180
              +PNF  G  G HQ+    +  A + PP  GY LQ  PQLY+   QQ++F   ++   
Sbjct: 121 HAGAPNFGFGL-GTHQAGHVNNPTAMMMPPGRGYHLQPQPQLYHPQSQQYLFSLGSNNAQ 180

Query: 181 -GGDFLQRLSAPRPANGAVAGDGFLIESAVSSQIPPAGASADSSNES 208
            G  FLQRL + RP +  V+ DGF++E   SS   P+     SS+E+
Sbjct: 181 AGDPFLQRLGSSRPRSIGVS-DGFVMEGVSSSSQVPSARPPGSSDEN 223

[Close]

BLAST of CsGy4G006970 vs. TrEMBL
Match: tr|A0A2I4F9H6|A0A2I4F9H6_9ROSI (VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108996736 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 6.0e-37
Identity = 115/232 (49.57%), Postives = 132/232 (56.90%), Query Frame = 0


Query: 3   GDWLQFYHQNLSSTAAPPPSDHSTSEMFFVD-RVSDATGVITTTASVNT----LGSTG-- 62
           GDW QFY  NLSS A  P    S      +D RVSD T V +T  SV T    LGS G  
Sbjct: 9   GDWFQFYPHNLSSQATSPGHAASRPPPDLLDSRVSDDTVVTSTVTSVATLMTPLGSGGAG 68

Query: 63  -----------LNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFT 122
                      L+PEGRV KP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP+  F 
Sbjct: 69  TSSSNMSTGHPLSPEGRVSKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSATFA 128

Query: 123 SS----ISPNFSLGFGGIHQSNFPTSQNATISPPPSGY-LLQQPPQLYNHNPQQFMF--- 182
           S+     +PNF  G G   +     +  A + PP  GY  LQ  PQLY    QQ+MF   
Sbjct: 129 SAGAHPGAPNFGFGLGAAGRQAHVNNPTAMMLPPGRGYHHLQPQPQLYQPQSQQYMFSLG 188

Query: 183 PTVAHGGDFLQRLSAPRPANGAVAGDGFLIESAVSSQIPPAGASADSSNESN 209
              A G  FLQRLS+ RP N  V+ DGFL+E   SS   P  +S+ + N SN
Sbjct: 189 SNNAPGDAFLQRLSSSRPPNAGVS-DGFLMEGVSSSFQVPRPSSSSNENRSN 239

[Close]

BLAST of CsGy4G006970 vs. TrEMBL
Match: tr|A0A061DLC3|A0A061DLC3_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_002034 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 7.1e-30
Identity = 107/233 (45.92%), Postives = 123/233 (52.79%), Query Frame = 0


Query: 1   MSG--DWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNT-------- 60
           MSG  DW QFY QNLS   AP      +SE  F D+ SDAT V TT  S +         
Sbjct: 5   MSGPTDWAQFYQQNLSVQEAPNRGRVVSSESAFGDQGSDATVVTTTITSSSAPSPLASGP 64

Query: 61  LGSTG--LNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTS-SI 120
            GS+   L+PEGRV KP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP+ PF   S 
Sbjct: 65  AGSSAGHLSPEGRVSKPLRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFPGHSG 124

Query: 121 SPNFSLGFGGIHQSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFP---------- 180
            PNF  GFGG      P     ++  PP G+ LQ                          
Sbjct: 125 GPNFGFGFGG----RQPHVNPGSLMIPPGGFHLQXXXXXXXXXXXXXXXXXXXXXXXXXS 184

Query: 181 -TVAHGGDFLQRLSA-PRPANGAVAGDGFLIESAVSSQIPPAGASADSSNESN 209
                G  FLQRL   PRP       DGF++E A SSQ+PP+   + + N SN
Sbjct: 185 NNPGAGDLFLQRLGGNPRP--NMEGSDGFVVEGA-SSQVPPSRTPSSNENRSN 230

The following BLAST results are available for this feature:

BLAST of CsGy4G006970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653250.1	4.0e-117	100.00	PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus]	[more]
KGN53485.1	3.6e-102	92.34	hypothetical protein Csa_4G056730 [Cucumis sativus]	[more]
XP_008451884.1	2.1e-97	87.50	PREDICTED: VQ motif-containing protein 22-like [Cucumis melo]	[more]
XP_022982664.1	4.9e-75	73.27	VQ motif-containing protein 22-like [Cucurbita maxima]	[more]
XP_023552946.1	1.4e-66	68.57	VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy4G006970 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22160.1	6.3e-16	51.46	VQ motif-containing protein	[more]
AT4G39720.1	5.2e-10	34.68	VQ motif-containing protein	[more]
AT5G65170.1	5.2e-10	39.13	VQ motif-containing protein	[more]
AT4G15120.1	7.5e-09	45.05	VQ motif-containing protein	[more]
AT4G20000.1	2.5e-04	51.85	VQ motif-containing protein	[more]

BLAST of CsGy4G006970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LIE6\|VQ22_ARATH	1.1e-14	51.46	VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1	[more]

BLAST of CsGy4G006970 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KV74\|A0A0A0KV74_CUCSA	2.4e-102	92.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056730 PE=4 SV=1	[more]
tr\|A0A1S3BTN7\|A0A1S3BTN7_CUCME	1.4e-97	87.50	VQ motif-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103493042 PE=4...	[more]
tr\|A0A2I4FG60\|A0A2I4FG60_9ROSI	1.8e-41	50.66	VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108998517 PE...	[more]
tr\|A0A2I4F9H6\|A0A2I4F9H6_9ROSI	6.0e-37	49.57	VQ motif-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108996736 PE...	[more]
tr\|A0A061DLC3\|A0A061DLC3_THECC	7.1e-30	45.92	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_002034 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G006970.1	CsGy4G006970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 75..102 e-value: 3.9E-10 score: 38.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..216
None	No IPR available	PANTHER	PTHR33179	FAMILY NOT NAMED	coord: 30..209
None	No IPR available	PANTHER	PTHR33179:SF7	VQ MOTIF-CONTAINING PROTEIN 22	coord: 30..209

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G006970	Cla005447	Watermelon (97103) v1	cgybwmB289
CsGy4G006970	Csa4G056730	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G006970	MELO3C016231	Melon (DHL92) v3.5.1	cgybmeB255
CsGy4G006970	ClCG07G010990	Watermelon (Charleston Gray)	cgybwcgB302
CsGy4G006970	CSPI04G07050	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G006970	CmaCh16G004950	Cucurbita maxima (Rimu)	cgybcmaB498
CsGy4G006970	CmaCh04G006070	Cucurbita maxima (Rimu)	cgybcmaB541
CsGy4G006970	Lsi07G007880	Bottle gourd (USVL1VR-Ls)	cgyblsiB278
CsGy4G006970	Cp4.1LG01g01160	Cucurbita pepo (Zucchini)	cgybcpeB501
CsGy4G006970	Cp4.1LG14g03000	Cucurbita pepo (Zucchini)	cgybcpeB487
CsGy4G006970	MELO3C016231.2	Melon (DHL92) v3.6.1	cgybmedB254
CsGy4G006970	CsaV3_4G032360	Cucumber (Chinese Long) v3	cgybcucB175
CsGy4G006970	CsaV3_4G007280	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G006970	Cla97C07G137730	Watermelon (97103) v2	cgybwmbB304
CsGy4G006970	Bhi01G002369	Wax gourd	cgybwgoB352
CsGy4G006970	Carg11411	Silver-seed gourd	carcgybB0652
CsGy4G006970	Carg13137	Silver-seed gourd	carcgybB0047

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsGy4G006970	CsGy4G020530	Cucumber (Gy14) v2	cgybcgybB121

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G006970	Cucurbita moschata (Rifu)	cgybcmoB467
CsGy4G006970	Cucurbita moschata (Rifu)	cgybcmoB515