CmaCh04G006070 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G006070
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionVQ motif-containing family protein
LocationCma_Chr04 : 3088903 .. 3089559 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAGCCCCGGCGATTGGCTTCAATTTTACCATCAAAATCTTTCTACCACGGCGCCGCCACCACCTTCCGATTTACCCACCTCCTCTGCAACGATCTTTGCAGAACGAGTATCAGACGCCACCGCCGTCCCCACTACTTCCGCTGCTATCATCGGAAGTTCGGCTGGAAACACCGGCTTGAATCCGGAAGGTCGTGTCGGAAAGCCGATTCGTCGCCGGTCCAGAGCGTCACGGCGGACTCCGACAACGTTGCTCAACACAGATACGACGAATTTCAGAGCGATGGTTCAGCAATTCACTGGCGGTCCGACTTCTTCTTCCGCCTCATCGATTTCCCCCAATTTTCCGCTAGGGTTCCGCGGGATTTGTCAATCGAATTTCGGCACTCCACCGAACGCCGTGATTTCTCCACCGTCTGATTATCTACAACTGCCGCAGTTTTATCATTCCCACCCCCAGCCGTTCATGTTTCCGGCCGCTGCACATGGCGGAGACTTTCTGCAGAGGATATCCGTTGCGAGGCCGGCTAATGACGGAGTCGCTGGAGATGGATTTCTGATGGAAAGTGCGGTTTCTTCTCAAATTCCTACCACCGGAGCTTCTGCAGATTCCTCCAACAAGACCAATCACGGTAATGGTGCCTCACTGTTCTAA

mRNA sequence

ATGTCCAGCCCCGGCGATTGGCTTCAATTTTACCATCAAAATCTTTCTACCACGGCGCCGCCACCACCTTCCGATTTACCCACCTCCTCTGCAACGATCTTTGCAGAACGAGTATCAGACGCCACCGCCGTCCCCACTACTTCCGCTGCTATCATCGGAAGTTCGGCTGGAAACACCGGCTTGAATCCGGAAGGTCGTGTCGGAAAGCCGATTCGTCGCCGGTCCAGAGCGTCACGGCGGACTCCGACAACGTTGCTCAACACAGATACGACGAATTTCAGAGCGATGGTTCAGCAATTCACTGGCGGTCCGACTTCTTCTTCCGCCTCATCGATTTCCCCCAATTTTCCGCTAGGGTTCCGCGGGATTTGTCAATCGAATTTCGGCACTCCACCGAACGCCGTGATTTCTCCACCGTCTGATTATCTACAACTGCCGCAGTTTTATCATTCCCACCCCCAGCCGTTCATGTTTCCGGCCGCTGCACATGGCGGAGACTTTCTGCAGAGGATATCCGTTGCGAGGCCGGCTAATGACGGAGTCGCTGGAGATGGATTTCTGATGGAAAGTGCGGTTTCTTCTCAAATTCCTACCACCGGAGCTTCTGCAGATTCCTCCAACAAGACCAATCACGGTAATGGTGCCTCACTGTTCTAA

Coding sequence (CDS)

ATGTCCAGCCCCGGCGATTGGCTTCAATTTTACCATCAAAATCTTTCTACCACGGCGCCGCCACCACCTTCCGATTTACCCACCTCCTCTGCAACGATCTTTGCAGAACGAGTATCAGACGCCACCGCCGTCCCCACTACTTCCGCTGCTATCATCGGAAGTTCGGCTGGAAACACCGGCTTGAATCCGGAAGGTCGTGTCGGAAAGCCGATTCGTCGCCGGTCCAGAGCGTCACGGCGGACTCCGACAACGTTGCTCAACACAGATACGACGAATTTCAGAGCGATGGTTCAGCAATTCACTGGCGGTCCGACTTCTTCTTCCGCCTCATCGATTTCCCCCAATTTTCCGCTAGGGTTCCGCGGGATTTGTCAATCGAATTTCGGCACTCCACCGAACGCCGTGATTTCTCCACCGTCTGATTATCTACAACTGCCGCAGTTTTATCATTCCCACCCCCAGCCGTTCATGTTTCCGGCCGCTGCACATGGCGGAGACTTTCTGCAGAGGATATCCGTTGCGAGGCCGGCTAATGACGGAGTCGCTGGAGATGGATTTCTGATGGAAAGTGCGGTTTCTTCTCAAATTCCTACCACCGGAGCTTCTGCAGATTCCTCCAACAAGACCAATCACGGTAATGGTGCCTCACTGTTCTAA

Protein sequence

MSSPGDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNTGLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSSASSISPNFPLGFRGICQSNFGTPPNAVISPPSDYLQLPQFYHSHPQPFMFPAAAHGGDFLQRISVARPANDGVAGDGFLMESAVSSQIPTTGASADSSNKTNHGNGASLF
Homology
[Close]
BLAST of CmaCh04G006070 vs. Swiss-Prot
Match: VQ22_ARATH (VQ motif-containing protein 22 OS=Arabidopsis thaliana GN=VQ22 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-17
Identity = 65/152 (42.76%), Postives = 86/152 (56.58%), Query Frame = 1 

Query: 1   MSSPGDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNTG 60
           M++P +W QFY+ N                 T F    + +TAV TT+A    +++ ++ 
Sbjct: 1   MANPNEWSQFYNNN----------------QTFFTTSTTASTAVTTTTAG--DTTSIDSR 60

Query: 61  LNPE-GRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTS------------S 120
           L+PE GRV KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP++            S
Sbjct: 61  LSPETGRVTKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFS 120

Query: 121 SASSISPNFPLGFRGICQSNFGTPPNAVISPP 140
             SS  P+     +   Q NF   P+A + PP
Sbjct: 121 LTSSSDPSAGSSQQAPWQYNF--QPHAPLQPP 132

[Close]
BLAST of CmaCh04G006070 vs. TrEMBL
Match: A0A0A0KV74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056730 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 7.1e-64
Identity = 143/216 (66.20%), Postives = 163/216 (75.46%), Query Frame = 1 

Query: 5   GDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNTGLNPE 64
           GDWLQFYHQNLS+TA PPPSD  TS    F +RVSDAT V TT+A++  ++ G+TGLNPE
Sbjct: 3   GDWLQFYHQNLSSTAAPPPSDHSTSEM-FFVDRVSDATGVITTTASV--NTLGSTGLNPE 62

Query: 65  GRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSSASSISPNFPLGFRGIC 124
           GRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT    SSISPNF LGF GI 
Sbjct: 63  GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIH 122

Query: 125 QSNFGTPPNAVIS-PPSDYL--QLPQFYHSHPQPFMFPAAAHGGDFLQRISVARPANDGV 184
           QSNF T  NA IS PPS YL  Q PQ Y+ +PQ FMFP  AHGGDFLQR+S  RPAN  V
Sbjct: 123 QSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAV 182

Query: 185 AGDGFLMESAVSSQIPTTGASADSSNKTNHGNGASL 218
           AGDGFL+ESA+    PT      ++  ++   G++L
Sbjct: 183 AGDGFLIESAIP---PTRAMGVMAAYCSDEEEGSTL 212

[Close]
BLAST of CmaCh04G006070 vs. TrEMBL
Match: A0A061DLC3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002034 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.9e-30
Identity = 105/233 (45.06%), Postives = 134/233 (57.51%), Query Frame = 1 

Query: 1   MSSPGDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTT----------SAA 60
           MS P DW QFY QNLS    P    +  SS + F ++ SDAT V TT          ++ 
Sbjct: 5   MSGPTDWAQFYQQNLSVQEAPNRGRV-VSSESAFGDQGSDATVVTTTITSSSAPSPLASG 64

Query: 61  IIGSSAGNTGLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSS-SA 120
             GSSAG+  L+PEGRV KP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP++    
Sbjct: 65  PAGSSAGH--LSPEGRVSKPLRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFPG 124

Query: 121 SSISPNFPLGFRGICQSNFGTPPNAVISPPSDYLQL-----PQFYH---SHPQPFMFPAA 180
            S  PNF  GF G  +     P + +I P   +LQ      PQ  H      QP+MF  +
Sbjct: 125 HSGGPNFGFGFGG--RQPHVNPGSLMIPPGGFHLQYQQQQQPQQQHQFQQQNQPYMFSLS 184

Query: 181 AH----GGDFLQRISVARPANDGVAGDGFLMESAVSSQIPTTGASADSSNKTN 211
           ++    G  FLQR+    P  +    DGF++E A SSQ+P +   + + N++N
Sbjct: 185 SNNPGAGDLFLQRLG-GNPRPNMEGSDGFVVEGA-SSQVPPSRTPSSNENRSN 230

[Close]
BLAST of CmaCh04G006070 vs. TrEMBL
Match: W9REZ9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009324 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.1e-27
Identity = 103/241 (42.74%), Postives = 129/241 (53.53%), Query Frame = 1 

Query: 1   MSSPGDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNTG 60
           MS+P +W+QFY+QN S      P    T+  TI  +RVSDATAV   +AA+ GS++    
Sbjct: 5   MSNPTEWMQFYNQNFSGQ----PQASTTTQPTILPDRVSDATAV---TAAVTGSASPTVP 64

Query: 61  --LNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSSASSISPNFPL 120
             L+PEGRV KP+RRR+RASRRTPTTLLNTDTTNFRAMVQQFTGGP++  AS  S     
Sbjct: 65  NRLSPEGRVSKPVRRRTRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFASVGSHPGAS 124

Query: 121 GFR---GICQSNFGTPPNAVISPPSD--------YLQLPQFYH--SHPQPFMFPAAAHGG 180
            F    G  Q +F   P+AV+ P +         +L     YH     Q +MF     GG
Sbjct: 125 AFAFGLGARQGSFAN-PSAVMVPAAQAGNYHHTLHLHQQNLYHHQRQNQQYMFGGGGSGG 184

Query: 181 ----DFLQRISVARP--ANDGVAG----DGFLMESAVSSQIPTTGASADSSNKTNHGNGA 217
                F QR+S  RP  +N GV      +GFL      +  P    +  SSN  N     
Sbjct: 185 AGNDSFFQRLSSGRPVVSNMGVGNINTTEGFLNTVGSQAVAPAAATARPSSNSPNEDRSN 237

[Close]
BLAST of CmaCh04G006070 vs. TrEMBL
Match: A0A0D2TGR0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G173300 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.8e-26
Identity = 103/247 (41.70%), Postives = 127/247 (51.42%), Query Frame = 1 

Query: 1   MSSPGDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDA----TAVPTTSAAIIGSSA 60
           MS+P DW QFY   LS    P    + TS + +F ++ SD     T   T+S+A + S  
Sbjct: 1   MSTPTDWPQFYDHALSNQEIPNRVRILTSES-VFGDQGSDTAVLTTPTVTSSSAPLSSLG 60

Query: 61  GNTG-------LNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSSA 120
              G       L+PEGRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP++  A
Sbjct: 61  SGLGGGSSGGHLSPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFA 120

Query: 121 SSI----SPNFPLGFRGICQSNFGTPPNAVISPPSDY-LQLP-------QFYHSHPQPFM 180
                   PNF  GF    Q +   P N ++ PP+ + LQ         Q  H   QP M
Sbjct: 121 GGAPHHGGPNFGYGFGTRHQPHNSNPNNPLMLPPTGFHLQYQQQQQHQNQLIHHQNQPLM 180

Query: 181 FP------AAAHGGDFLQRISVARPANDGVAGDGFLMESAVSSQIPTTGASADSSNKTNH 219
           F       + A G  F QR+        GV G   +  S  SSQ+P +  S  SSN  N 
Sbjct: 181 FSLNSNDNSPAPGELFFQRL--------GVGGGVNMQGSDASSQVPASRTSTSSSN-DNR 237

[Close]
BLAST of CmaCh04G006070 vs. TrEMBL
Match: A0A067LFD1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00483 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25
Identity = 95/230 (41.30%), Postives = 125/230 (54.35%), Query Frame = 1 

Query: 1   MSSPGDWLQFY-HQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTT-----SAAIIGS 60
           MS+P DW QFY HQ+               + T+F++ VSDAT V TT     S  ++GS
Sbjct: 1   MSNPSDWGQFYNHQH---------------NHTMFSDGVSDATVVTTTITSSTSPTLLGS 60

Query: 61  SAGNTG------LNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSS 120
            +  +G      L+PEGRV KP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP++  
Sbjct: 61  GSSGSGSPTAAHLSPEGRVAKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPF 120

Query: 121 ASSISPNFPLGFRGICQSNFGTPPNAV----ISPPSDYLQLPQFYHSHPQPFMFP----A 180
           +SS S      F      NFG  P  V    + P + Y  L Q+   +   ++F     +
Sbjct: 121 SSSGSHLTTSSF------NFGMNPRQVHVNPMVPAAGYHNL-QYQQQNQPSYLFSLGNNS 180

Query: 181 AAHGGDFLQRISVARPANDGVAGDGFLMESAVSSQI--PTTGASADSSNK 209
             +G  F QR+   RP    V+ DG +M+   + Q+  P T     SSN+
Sbjct: 181 PGNGDLFFQRLGNPRPTGMDVSSDGLVMDGVSAQQVAAPPTRPPPSSSNE 208

[Close]
BLAST of CmaCh04G006070 vs. TAIR10
Match: AT3G22160.1 (AT3G22160.1 VQ motif-containing protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-18
Identity = 65/152 (42.76%), Postives = 86/152 (56.58%), Query Frame = 1 

Query: 1   MSSPGDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNTG 60
           M++P +W QFY+ N                 T F    + +TAV TT+A    +++ ++ 
Sbjct: 1   MANPNEWSQFYNNN----------------QTFFTTSTTASTAVTTTTAG--DTTSIDSR 60

Query: 61  LNPE-GRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTS------------S 120
           L+PE GRV KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP++            S
Sbjct: 61  LSPETGRVTKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFS 120

Query: 121 SASSISPNFPLGFRGICQSNFGTPPNAVISPP 140
             SS  P+     +   Q NF   P+A + PP
Sbjct: 121 LTSSSDPSAGSSQQAPWQYNF--QPHAPLQPP 132

[Close]
BLAST of CmaCh04G006070 vs. TAIR10
Match: AT4G15120.1 (AT4G15120.1 VQ motif-containing protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 72/193 (37.31%), Postives = 91/193 (47.15%), Query Frame = 1 

Query: 2   SSPGDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNTGL 61
           +S  DW QFY+                   T F    S  T   TT+      ++ ++ L
Sbjct: 3   NSNNDWSQFYNNQ-----------------TFFTTATSTVTTTTTTA------TSADSPL 62

Query: 62  NPEGR-VGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTS-SSASSISPNFPLG 121
           +P+ R V KP RRRSRASRRTPTTL NTDT NFRAMVQQFTGGP++ +  SS S  F L 
Sbjct: 63  SPDNRRVAKPTRRRSRASRRTPTTLFNTDTANFRAMVQQFTGGPSAVAFGSSPSSGFSL- 122

Query: 122 FRGICQSNFGTPPNAVISPPSDYLQLP-QFYHS----HPQPFMFPAAAHGGDFLQRISVA 181
                      P   V S P  Y  L  Q  H+      +P+MF ++         +S  
Sbjct: 123 -------TSSDPTAGVSSSPWQYANLQNQMAHNELMQQQRPYMFSSS-------NNVSTL 156

Query: 182 RPANDGVAGDGFL 188
              N  VA DGF+
Sbjct: 183 SYPN-AVATDGFV 156

[Close]
BLAST of CmaCh04G006070 vs. TAIR10
Match: AT5G65170.1 (AT5G65170.1 VQ motif-containing protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-08
Identity = 56/155 (36.13%), Postives = 71/155 (45.81%), Query Frame = 1 

Query: 16  STTAPPP-----PSDLPTSSATIFAERV--SDATAVPTTSAAIIGSSAGNTGLNPEGRVG 75
           STTA  P     P   P SS  +F       +   VP T+      S      N      
Sbjct: 78  STTATQPTDGSRPVPPPISSEQVFFTNPLQQNLRTVPNTNTTSPICSVPTDKKNGLATTR 137

Query: 76  KPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTS--SSASSISPNFPLGFRGICQS 135
            P ++RSR SRR PTT+L TDT+NFRAMVQ+FTG P++  +  SS  P       G   S
Sbjct: 138 NP-KKRSRVSRRAPTTVLTTDTSNFRAMVQEFTGNPSTPFTGLSSSFPRSRFDLFGSSSS 197

Query: 136 NFGTP----PNAVISPPS---DYLQLPQFYHSHPQ 155
           +   P    P+ +ISP +    YL     YH H Q
Sbjct: 198 SSSRPMKPFPHKLISPSTLNHHYLPPSSEYHHHHQ 231

[Close]
BLAST of CmaCh04G006070 vs. TAIR10
Match: AT4G39720.1 (AT4G39720.1 VQ motif-containing protein)

HSP 1 Score: 55.1 bits (131), Expect = 6.4e-08
Identity = 54/169 (31.95%), Postives = 81/169 (47.93%), Query Frame = 1 

Query: 54  SSAGNTGLNPEGRVG--KPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP------T 113
           +S+  + L P   +G  K  ++RSRASRR PTT+L TDT+NFRAMVQ+FTG P       
Sbjct: 95  TSSATSSLPPTNNIGVIKKTKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPLFNN 154

Query: 114 SSSASSISPNFPLGFRGICQSNFGTPPNAVISPPSDYL--QLPQFYHSHPQPFMFPAAAH 173
           +S  ++   N  LG      + + T  N ++ P +  L    P    S  Q +  P    
Sbjct: 155 NSIVNTTRLNTFLGLSSSSPNTYNT-NNLLLRPFAQKLTPATPLLSGSQIQQYQNPNNGF 214

Query: 174 GGDFLQRI---SVARPANDGVAGDGFLMESAVSSQIPTTGASADSSNKT 210
               LQ +    ++ P ++     G  M    S+  PTT A+A+ +  T
Sbjct: 215 EDMNLQALLQAHISNPRSNEHDQFGLGMMQTPSTNPPTTTAAANGNINT 262

[Close]
BLAST of CmaCh04G006070 vs. TAIR10
Match: AT1G35830.1 (AT1G35830.1 VQ motif-containing protein)

HSP 1 Score: 51.6 bits (122), Expect = 7.1e-07
Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 1 

Query: 12  HQNLSTTAPP-------PPSDLPTSSATIFAE--RVSDATAVPTTSAAIIGSSAGNTGLN 71
           H++ ST AP        PP   P SS+T + +   +S +++   T    + +   +  LN
Sbjct: 16  HESSSTGAPQDHSSFFLPPFQPPPSSSTYYGDPTTLSSSSSSSATYLNFVNNLISDDILN 75

Query: 72  ---------------PEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTS 107
                          P     +  R+R+RASRR PTT+L TDT+NFRAMVQ+FTG P S
Sbjct: 76  QTHLLPPQPPPPPPPPPPSSSRNPRKRTRASRRAPTTVLTTDTSNFRAMVQEFTGVPAS 134

[Close]
BLAST of CmaCh04G006070 vs. NCBI nr
Match: gi|659101968|ref|XP_008451884.1| (PREDICTED: uncharacterized protein LOC103493042 [Cucumis melo])

HSP 1 Score: 288.1 bits (736), Expect = 1.3e-74
Identity = 160/217 (73.73%), Postives = 171/217 (78.80%), Query Frame = 1 

Query: 5   GDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNTGLNPE 64
           GDWLQFYHQNLS+TAPPPPS   TS   IFA+RVSDATA   T         G+TGLNPE
Sbjct: 3   GDWLQFYHQNLSSTAPPPPSHHSTSEM-IFADRVSDATASANT--------LGSTGLNPE 62

Query: 65  GRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSSASSISPNFPLGFRGIC 124
           GRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT    SSISPNF LGF GI 
Sbjct: 63  GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIR 122

Query: 125 QSNFGTPPNAVIS-PPSDYL--QLPQFYHSHPQPFMFPAAAHGGDFLQRISVARPANDGV 184
           QSNF T  NA IS PPS YL  Q PQ Y+ +PQPF+FP  AHGGDFLQR+S  RPAN GV
Sbjct: 123 QSNFSTSQNAAISPPPSGYLLQQPPQLYNHNPQPFVFPTVAHGGDFLQRLSAPRPANGGV 182

Query: 185 AGDGFLMESAVSSQIPTTGASADSSNKTNHGNGASLF 219
           AGDGFL+ESAVSSQIP  GASADSSN++N GNG  LF
Sbjct: 183 AGDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 210

[Close]
BLAST of CmaCh04G006070 vs. NCBI nr
Match: gi|778691256|ref|XP_011653250.1| (PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 1.7e-74
Identity = 159/217 (73.27%), Postives = 174/217 (80.18%), Query Frame = 1 

Query: 5   GDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNTGLNPE 64
           GDWLQFYHQNLS+TA PPPSD  TS    F +RVSDAT V TT+A++  ++ G+TGLNPE
Sbjct: 3   GDWLQFYHQNLSSTAAPPPSDHSTSEM-FFVDRVSDATGVITTTASV--NTLGSTGLNPE 62

Query: 65  GRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSSASSISPNFPLGFRGIC 124
           GRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT    SSISPNF LGF GI 
Sbjct: 63  GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIH 122

Query: 125 QSNFGTPPNAVIS-PPSDYL--QLPQFYHSHPQPFMFPAAAHGGDFLQRISVARPANDGV 184
           QSNF T  NA IS PPS YL  Q PQ Y+ +PQ FMFP  AHGGDFLQR+S  RPAN  V
Sbjct: 123 QSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAV 182

Query: 185 AGDGFLMESAVSSQIPTTGASADSSNKTNHGNGASLF 219
           AGDGFL+ESAVSSQIP  GASADSSN++N GNG  LF
Sbjct: 183 AGDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 216

[Close]
BLAST of CmaCh04G006070 vs. NCBI nr
Match: gi|700198327|gb|KGN53485.1| (hypothetical protein Csa_4G056730 [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 1.0e-63
Identity = 143/216 (66.20%), Postives = 163/216 (75.46%), Query Frame = 1 

Query: 5   GDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNTGLNPE 64
           GDWLQFYHQNLS+TA PPPSD  TS    F +RVSDAT V TT+A++  ++ G+TGLNPE
Sbjct: 3   GDWLQFYHQNLSSTAAPPPSDHSTSEM-FFVDRVSDATGVITTTASV--NTLGSTGLNPE 62

Query: 65  GRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSSASSISPNFPLGFRGIC 124
           GRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT    SSISPNF LGF GI 
Sbjct: 63  GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIH 122

Query: 125 QSNFGTPPNAVIS-PPSDYL--QLPQFYHSHPQPFMFPAAAHGGDFLQRISVARPANDGV 184
           QSNF T  NA IS PPS YL  Q PQ Y+ +PQ FMFP  AHGGDFLQR+S  RPAN  V
Sbjct: 123 QSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGAV 182

Query: 185 AGDGFLMESAVSSQIPTTGASADSSNKTNHGNGASL 218
           AGDGFL+ESA+    PT      ++  ++   G++L
Sbjct: 183 AGDGFLIESAIP---PTRAMGVMAAYCSDEEEGSTL 212

[Close]
BLAST of CmaCh04G006070 vs. NCBI nr
Match: gi|590711222|ref|XP_007049045.1| (Uncharacterized protein TCM_002034 [Theobroma cacao])

HSP 1 Score: 139.8 bits (351), Expect = 5.6e-30
Identity = 105/233 (45.06%), Postives = 134/233 (57.51%), Query Frame = 1 

Query: 1   MSSPGDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTT----------SAA 60
           MS P DW QFY QNLS    P    +  SS + F ++ SDAT V TT          ++ 
Sbjct: 5   MSGPTDWAQFYQQNLSVQEAPNRGRV-VSSESAFGDQGSDATVVTTTITSSSAPSPLASG 64

Query: 61  IIGSSAGNTGLNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSS-SA 120
             GSSAG+  L+PEGRV KP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP++    
Sbjct: 65  PAGSSAGH--LSPEGRVSKPLRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFPG 124

Query: 121 SSISPNFPLGFRGICQSNFGTPPNAVISPPSDYLQL-----PQFYH---SHPQPFMFPAA 180
            S  PNF  GF G  +     P + +I P   +LQ      PQ  H      QP+MF  +
Sbjct: 125 HSGGPNFGFGFGG--RQPHVNPGSLMIPPGGFHLQYQQQQQPQQQHQFQQQNQPYMFSLS 184

Query: 181 AH----GGDFLQRISVARPANDGVAGDGFLMESAVSSQIPTTGASADSSNKTN 211
           ++    G  FLQR+    P  +    DGF++E A SSQ+P +   + + N++N
Sbjct: 185 SNNPGAGDLFLQRLG-GNPRPNMEGSDGFVVEGA-SSQVPPSRTPSSNENRSN 230

[Close]
BLAST of CmaCh04G006070 vs. NCBI nr
Match: gi|703086905|ref|XP_010093132.1| (hypothetical protein L484_009324 [Morus notabilis])

HSP 1 Score: 130.2 bits (326), Expect = 4.4e-27
Identity = 103/241 (42.74%), Postives = 129/241 (53.53%), Query Frame = 1 

Query: 1   MSSPGDWLQFYHQNLSTTAPPPPSDLPTSSATIFAERVSDATAVPTTSAAIIGSSAGNTG 60
           MS+P +W+QFY+QN S      P    T+  TI  +RVSDATAV   +AA+ GS++    
Sbjct: 5   MSNPTEWMQFYNQNFSGQ----PQASTTTQPTILPDRVSDATAV---TAAVTGSASPTVP 64

Query: 61  --LNPEGRVGKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTSSSASSISPNFPL 120
             L+PEGRV KP+RRR+RASRRTPTTLLNTDTTNFRAMVQQFTGGP++  AS  S     
Sbjct: 65  NRLSPEGRVSKPVRRRTRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFASVGSHPGAS 124

Query: 121 GFR---GICQSNFGTPPNAVISPPSD--------YLQLPQFYH--SHPQPFMFPAAAHGG 180
            F    G  Q +F   P+AV+ P +         +L     YH     Q +MF     GG
Sbjct: 125 AFAFGLGARQGSFAN-PSAVMVPAAQAGNYHHTLHLHQQNLYHHQRQNQQYMFGGGGSGG 184

Query: 181 ----DFLQRISVARP--ANDGVAG----DGFLMESAVSSQIPTTGASADSSNKTNHGNGA 217
                F QR+S  RP  +N GV      +GFL      +  P    +  SSN  N     
Sbjct: 185 AGNDSFFQRLSSGRPVVSNMGVGNINTTEGFLNTVGSQAVAPAAATARPSSNSPNEDRSN 237

The following BLAST results are available for this feature:
BLAST of CmaCh04G006070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VQ22_ARATH3.2e-1742.76VQ motif-containing protein 22 OS=Arabidopsis thaliana GN=VQ22 PE=2 SV=1[more]
BLAST of CmaCh04G006070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KV74_CUCSA7.1e-6466.20Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056730 PE=4 SV=1[more]
A0A061DLC3_THECC3.9e-3045.06Uncharacterized protein OS=Theobroma cacao GN=TCM_002034 PE=4 SV=1[more]
W9REZ9_9ROSA3.1e-2742.74Uncharacterized protein OS=Morus notabilis GN=L484_009324 PE=4 SV=1[more]
A0A0D2TGR0_GOSRA5.8e-2641.70Uncharacterized protein OS=Gossypium raimondii GN=B456_007G173300 PE=4 SV=1[more]
A0A067LFD1_JATCU1.0e-2541.30Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00483 PE=4 SV=1[more]
BLAST of CmaCh04G006070 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G22160.11.8e-1842.76 VQ motif-containing protein[more]
AT4G15120.11.1e-1537.31 VQ motif-containing protein[more]
AT5G65170.12.9e-0836.13 VQ motif-containing protein[more]
AT4G39720.16.4e-0831.95 VQ motif-containing protein[more]
AT1G35830.17.1e-0735.29 VQ motif-containing protein[more]
BLAST of CmaCh04G006070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101968|ref|XP_008451884.1|1.3e-7473.73PREDICTED: uncharacterized protein LOC103493042 [Cucumis melo][more]
gi|778691256|ref|XP_011653250.1|1.7e-7473.27PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus][more]
gi|700198327|gb|KGN53485.1|1.0e-6366.20hypothetical protein Csa_4G056730 [Cucumis sativus][more]
gi|590711222|ref|XP_007049045.1|5.6e-3045.06Uncharacterized protein TCM_002034 [Theobroma cacao][more]
gi|703086905|ref|XP_010093132.1|4.4e-2742.74hypothetical protein L484_009324 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008889VQ
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G006070.1CmaCh04G006070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 80..105
score: 1.
NoneNo IPR availablePANTHERPTHR33179FAMILY NOT NAMEDcoord: 1..159
score: 9.4
NoneNo IPR availablePANTHERPTHR33179:SF7GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MKA23coord: 1..159
score: 9.4