ClCG07G010990 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG07G010990
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	VQ motif-containing family protein
Location	CG_Chr07 : 26912988 .. 26913623 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGGCCCTGCCGATTGGCTTCAATTTTACCATCAAAATCTTTCGTCCACGGCGGCGCCACCATCTTCCGATCAATCCACCTCCGAACTGATTTTCGTCGATCGAGTTTCTGACGCCACCGCCTCCGGAAACACAGGCGGTTCGTCTGTATTGAATCCGGAAGGTCGTGTAGGAAAGCCGGTTCGCCGCCGGTCCAGGGCATCTCGGCGGACTCCGACGACGTTGCTCAACACGGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACCGGCGGTCCAACTCCACCTTTCGCCTCATCGATTTCCCCCAATTTTTCGCTAGGGTACGGCGGGATTCGTCCATCGAATTTCGCAACTCCGCCGAACGCCGTGATTTCTCCGCCGTCTGGTTACCTATTACAACAACCACCACAGTTCTACAATCACAACCCTCAGCCGTTCGTGTTTCCGACAGCCGCACACGGCGGCGACTTTCTTCAGAGGCTGTCCGCGCCGAGGCCGGCTAATGGCGGAGTTGCCGGAGACGGATTTCTGATGGAAAGTGTGGTTGCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACGAGAACAATGGCGGGAACGGCCGCTTACTGTTCTGA

mRNA sequence

ATGTCCGGCCCTGCCGATTGGCTTCAATTTTACCATCAAAATCTTTCGTCCACGGCGGCGCCACCATCTTCCGATCAATCCACCTCCGAACTGATTTTCGTCGATCGAGTTTCTGACGCCACCGCCTCCGGAAACACAGGCGGTTCGTCTGTATTGAATCCGGAAGGTCGTGTAGGAAAGCCGGTTCGCCGCCGGTCCAGGGCATCTCGGCGGACTCCGACGACGTTGCTCAACACGGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACCGGCGGTCCAACTCCACCTTTCGCCTCATCGATTTCCCCCAATTTTTCGCTAGGGTACGGCGGGATTCGTCCATCGAATTTCGCAACTCCGCCGAACGCCGTGATTTCTCCGCCGTCTGGTTACCTATTACAACAACCACCACAGTTCTACAATCACAACCCTCAGCCGTTCGTGTTTCCGACAGCCGCACACGGCGGCGACTTTCTTCAGAGGCTGTCCGCGCCGAGGCCGGCTAATGGCGGAGTTGCCGGAGACGGATTTCTGATGGAAAGTGTGGTTGCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACGAGAACAATGGCGGGAACGGCCGCTTACTGTTCTGA

Coding sequence (CDS)

ATGTCCGGCCCTGCCGATTGGCTTCAATTTTACCATCAAAATCTTTCGTCCACGGCGGCGCCACCATCTTCCGATCAATCCACCTCCGAACTGATTTTCGTCGATCGAGTTTCTGACGCCACCGCCTCCGGAAACACAGGCGGTTCGTCTGTATTGAATCCGGAAGGTCGTGTAGGAAAGCCGGTTCGCCGCCGGTCCAGGGCATCTCGGCGGACTCCGACGACGTTGCTCAACACGGACACAACTAATTTCAGAGCGATGGTTCAACAATTCACCGGCGGTCCAACTCCACCTTTCGCCTCATCGATTTCCCCCAATTTTTCGCTAGGGTACGGCGGGATTCGTCCATCGAATTTCGCAACTCCGCCGAACGCCGTGATTTCTCCGCCGTCTGGTTACCTATTACAACAACCACCACAGTTCTACAATCACAACCCTCAGCCGTTCGTGTTTCCGACAGCCGCACACGGCGGCGACTTTCTTCAGAGGCTGTCCGCGCCGAGGCCGGCTAATGGCGGAGTTGCCGGAGACGGATTTCTGATGGAAAGTGTGGTTGCTTCTCAAATTCCTCCCGCCGGAGCTTCTGCAGATTCCTCCAACGAGAACAATGGCGGGAACGGCCGCTTACTGTTCTGA

Protein sequence

MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDATASGNTGGSSVLNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGYGGIRPSNFATPPNAVISPPSGYLLQQPPQFYNHNPQPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSSNENNGGNGRLLF

Homology

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BLAST of ClCG07G010990 vs. Swiss-Prot
Match: VQ22_ARATH (VQ motif-containing protein 22 OS=Arabidopsis thaliana GN=VQ22 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21
Identity = 71/161 (44.10%), Postives = 86/161 (53.42%), Query Frame = 1


Query: 1   MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDATASGNTGGSSVLNPE-GRVG 60
           M+ P +W QFY+ N   T    S+  ST+       V+  TA   T   S L+PE GRV 
Sbjct: 1   MANPNEWSQFYNNN--QTFFTTSTTASTA-------VTTTTAGDTTSIDSRLSPETGRVT 60

Query: 61  KPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP----------TPPFASSISPNFSL 120
           KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP          T  F+ + S + S 
Sbjct: 61  KPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFSLTSSSDPSA 120

Query: 121 GYGGIRPSNFATPPNAVISPPSGYLLQQPPQFYNHNPQPFV 151
           G     P  +   P+A + PP     Q+P  F  +N  P V
Sbjct: 121 GSSQQAPWQYNFQPHAPLQPP-----QRPYMFSLNNVNPVV 147

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BLAST of ClCG07G010990 vs. TrEMBL
Match: A0A0A0KV74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056730 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.3e-82
Identity = 163/211 (77.25%), Postives = 171/211 (81.04%), Query Frame = 1


Query: 1   MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDAT------ASGNTGGSSVLNP 60
           MSG  DWLQFYHQNLSSTAAPP SD STSE+ FVDRVSDAT      AS NT GS+ LNP
Sbjct: 1   MSG--DWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNP 60

Query: 61  EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGYGGI 120
           EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLG+GGI
Sbjct: 61  EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGI 120

Query: 121 RPSNFATPPNAVIS-PPSGYLLQQPPQFYNHNPQPFVFPTAAHGGDFLQRLSAPRPANGG 180
             SNF T  NA IS PPSGYLLQQPPQ YNHNPQ F+FPT AHGGDFLQRLSAPRPANG 
Sbjct: 121 HQSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGA 180

Query: 181 VAGDGFLMESVVASQIPPAGASADSSNENNG 205
           VAGDGFL+ES +         +A  S+E  G
Sbjct: 181 VAGDGFLIESAIPPTRAMGVMAAYCSDEEEG 209

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BLAST of ClCG07G010990 vs. TrEMBL
Match: A0A061DLC3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002034 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 9.0e-40
Identity = 112/233 (48.07%), Postives = 137/233 (58.80%), Query Frame = 1


Query: 1   MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDAT---------------ASGN 60
           MSGP DW QFY QNLS   AP      +SE  F D+ SDAT               ASG 
Sbjct: 5   MSGPTDWAQFYQQNLSVQEAPNRGRVVSSESAFGDQGSDATVVTTTITSSSAPSPLASGP 64

Query: 61  TGGSSV-LNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF-ASSI 120
            G S+  L+PEGRV KP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP+ PF   S 
Sbjct: 65  AGSSAGHLSPEGRVSKPLRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFPGHSG 124

Query: 121 SPNFSLGYGGIRPSNFATPPNAVISPPSGYLL--------QQPPQFYNHNPQPFVFPTAA 180
            PNF  G+GG +P      P +++ PP G+ L        QQ  QF   N QP++F  ++
Sbjct: 125 GPNFGFGFGGRQPH---VNPGSLMIPPGGFHLQYQQQQQPQQQHQFQQQN-QPYMFSLSS 184

Query: 181 H----GGDFLQRLSA-PRPANGGVAGDGFLMESVVASQIPPAGASADSSNENN 204
           +    G  FLQRL   PRP   G   DGF++E   +SQ+PP+   + + N +N
Sbjct: 185 NNPGAGDLFLQRLGGNPRPNMEG--SDGFVVEG-ASSQVPPSRTPSSNENRSN 230

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BLAST of ClCG07G010990 vs. TrEMBL
Match: A0A0D2TGR0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G173300 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.7e-36
Identity = 109/246 (44.31%), Postives = 130/246 (52.85%), Query Frame = 1


Query: 1   MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDATA-----------------S 60
           MS P DW QFY   LS+   P      TSE +F D+ SD                    S
Sbjct: 1   MSTPTDWPQFYDHALSNQEIPNRVRILTSESVFGDQGSDTAVLTTPTVTSSSAPLSSLGS 60

Query: 61  GNTGGSSV--LNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFAS 120
           G  GGSS   L+PEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP+ PFA 
Sbjct: 61  GLGGGSSGGHLSPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFAG 120

Query: 121 SI----SPNFSLGYGGIRPSNFATPPNAVISPPSGYLL------QQPPQFYNHNPQPFVF 180
                  PNF  G+G     + + P N ++ PP+G+ L      Q   Q  +H  QP +F
Sbjct: 121 GAPHHGGPNFGYGFGTRHQPHNSNPNNPLMLPPTGFHLQYQQQQQHQNQLIHHQNQPLMF 180

Query: 181 P------TAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSSNENNGG 212
                  + A G  F QRL        GV G   +  S  +SQ+P +  S  SSN+N   
Sbjct: 181 SLNSNDNSPAPGELFFQRL--------GVGGGVNMQGSDASSQVPASRTSTSSSNDNR-S 237

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BLAST of ClCG07G010990 vs. TrEMBL
Match: W9REZ9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009324 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.7e-33
Identity = 109/233 (46.78%), Postives = 135/233 (57.94%), Query Frame = 1


Query: 1   MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDATA--SGNTGGSSV-----LN 60
           MS P +W+QFY+QN S     P +  +T   I  DRVSDATA  +  TG +S      L+
Sbjct: 5   MSNPTEWMQFYNQNFSGQ---PQASTTTQPTILPDRVSDATAVTAAVTGSASPTVPNRLS 64

Query: 61  PEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSIS----PNFSL 120
           PEGRV KPVRRR+RASRRTPTTLLNTDTTNFRAMVQQFTGGP+ PFAS  S      F+ 
Sbjct: 65  PEGRVSKPVRRRTRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFASVGSHPGASAFAF 124

Query: 121 GYGGIRPSNFATPPNAVISPPSG--------YLLQQPPQFYNHNPQPFVFPTAAHGG--- 180
           G G  R  +FA  P+AV+ P +         +L QQ    +    Q ++F     GG   
Sbjct: 125 GLGA-RQGSFAN-PSAVMVPAAQAGNYHHTLHLHQQNLYHHQRQNQQYMFGGGGSGGAGN 184

Query: 181 -DFLQRLSAPRP--ANGGVAG----DGFLMESVVASQIPPAGASA-DSSNENN 204
             F QRLS+ RP  +N GV      +GFL  +V +  + PA A+A  SSN  N
Sbjct: 185 DSFFQRLSSGRPVVSNMGVGNINTTEGFL-NTVGSQAVAPAAATARPSSNSPN 231

[Close]

BLAST of ClCG07G010990 vs. TrEMBL
Match: B9HCD7_POPTR (VQ motif-containing family protein OS=Populus trichocarpa GN=POPTR_0006s00810g PE=4 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-32
Identity = 101/244 (41.39%), Postives = 128/244 (52.46%), Query Frame = 1


Query: 4   PADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDATA--------------SGNTGGS 63
           P DW QFY QNLS+   PP         +F DRV+D+T                G++  S
Sbjct: 9   PTDWSQFYQQNLSNQVLPPIRP------MFRDRVADSTTVTTTTINTSGVPNPMGSSNSS 68

Query: 64  SV----LNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSI-- 123
           S     L+PEGRV KP+R+RSRASRRTPTTLLNTDTTNFRAMVQQFTGGP+ PFAS    
Sbjct: 69  SSAGRHLSPEGRVAKPIRKRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFASGSQI 128

Query: 124 -SPNFSLGYGGIRPSNFATPPNAVISPPSGYLL----QQPPQF--YNHNPQPFVF----- 183
            + NF    G  R ++    P+ V+ PP+GY L    QQ  QF   + +P  ++F     
Sbjct: 129 NATNFGFALGAYRQAHHVNQPSPVMMPPAGYNLQYQQQQQQQFQQQSQHPSSYMFSLGNS 188

Query: 184 --------PTAAHGGDFLQRLSAPRPANGGV----AGDGFLMESVVASQI-PPAGASADS 203
                    T   G  F QRL  PR     +     G G    +V++S + PP+   + S
Sbjct: 189 NIGTSTTTTTTTPGDMFFQRLGNPRVPTTSMEVSDQGFGSTEGAVISSLVAPPSRPPSSS 246

[Close]

BLAST of ClCG07G010990 vs. TAIR10
Match: AT3G22160.1 (AT3G22160.1 VQ motif-containing protein)

HSP 1 Score: 104.4 bits (259), Expect = 8.9e-23
Identity = 71/161 (44.10%), Postives = 86/161 (53.42%), Query Frame = 1


Query: 1   MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDATASGNTGGSSVLNPE-GRVG 60
           M+ P +W QFY+ N   T    S+  ST+       V+  TA   T   S L+PE GRV 
Sbjct: 1   MANPNEWSQFYNNN--QTFFTTSTTASTA-------VTTTTAGDTTSIDSRLSPETGRVT 60

Query: 61  KPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP----------TPPFASSISPNFSL 120
           KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP          T  F+ + S + S 
Sbjct: 61  KPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFSLTSSSDPSA 120

Query: 121 GYGGIRPSNFATPPNAVISPPSGYLLQQPPQFYNHNPQPFV 151
           G     P  +   P+A + PP     Q+P  F  +N  P V
Sbjct: 121 GSSQQAPWQYNFQPHAPLQPP-----QRPYMFSLNNVNPVV 147

[Close]

BLAST of ClCG07G010990 vs. TAIR10
Match: AT4G15120.1 (AT4G15120.1 VQ motif-containing protein)

HSP 1 Score: 95.5 bits (236), Expect = 4.1e-20
Identity = 77/207 (37.20%), Postives = 94/207 (45.41%), Query Frame = 1


Query: 6   DWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDATASGNTGGSSVLNPEGR-VGKPVRR 65
           DW QFY+     T A  +   +T+                T   S L+P+ R V KP RR
Sbjct: 7   DWSQFYNNQTFFTTATSTVTTTTTTA--------------TSADSPLSPDNRRVAKPTRR 66

Query: 66  RSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTP-PFASSISPNFSLGYGGIRPSNFATPP 125
           RSRASRRTPTTL NTDT NFRAMVQQFTGGP+   F SS S  FSL          + P 
Sbjct: 67  RSRASRRTPTTLFNTDTANFRAMVQQFTGGPSAVAFGSSPSSGFSL--------TSSDPT 126

Query: 126 NAVISPPSGYLLQQPPQFYN---HNPQPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGFL 185
             V S P  Y   Q    +N      +P++F ++ +    +  LS P      VA DGF+
Sbjct: 127 AGVSSSPWQYANLQNQMAHNELMQQQRPYMFSSSNN----VSTLSYP----NAVATDGFV 169

Query: 186 MESVVASQIPPAGASADSSNENNGGNG 208
                          A+ S E  GG G
Sbjct: 187 --------------GAEESREGGGGGG 169

[Close]

BLAST of ClCG07G010990 vs. TAIR10
Match: AT4G39720.1 (AT4G39720.1 VQ motif-containing protein)

HSP 1 Score: 78.6 bits (192), Expect = 5.2e-15
Identity = 70/216 (32.41%), Postives = 94/216 (43.52%), Query Frame = 1


Query: 8   LQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDATAS---GNTGGSSVLNPEGRVG--KPV 67
           L F H N +S   P   + +T   + V++  D  +      +  +S L P   +G  K  
Sbjct: 57  LHFDHNNNNSLIPPNYFNNNT--FLPVNQQPDPISQLDLRTSSATSSLPPTNNIGVIKKT 116

Query: 68  RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSIS------PNFSLGYGGIRP 127
           ++RSRASRR PTT+L TDT+NFRAMVQ+FTG P PP  ++ S       N  LG     P
Sbjct: 117 KKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPLFNNNSIVNTTRLNTFLGLSSSSP 176

Query: 128 SNFATPPNAVISPPSGYLLQQPPQFYNHNPQPFVFPTAAHGGDFLQRL-----SAPRPAN 187
           + + T  N ++ P +  L    P       Q +  P        LQ L     S PR   
Sbjct: 177 NTYNT-NNLLLRPFAQKLTPATPLLSGSQIQQYQNPNNGFEDMNLQALLQAHISNPRSNE 236

Query: 188 GGVAGDGFLMESVVASQIPPAGASADSSNENNGGNG 208
               G G +      S  PP   +A + N N G NG
Sbjct: 237 HDQFGLGMMQ---TPSTNPPTTTAAANGNINTGDNG 266

[Close]

BLAST of ClCG07G010990 vs. TAIR10
Match: AT5G65170.1 (AT5G65170.1 VQ motif-containing protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-11
Identity = 40/92 (43.48%), Postives = 52/92 (56.52%), Query Frame = 1


Query: 63  RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFA--SSISPNFSLGYGGIRPSNFA 122
           ++RSR SRR PTT+L TDT+NFRAMVQ+FTG P+ PF   SS  P       G   S+ +
Sbjct: 140 KKRSRVSRRAPTTVLTTDTSNFRAMVQEFTGNPSTPFTGLSSSFPRSRFDLFGSSSSSSS 199

Query: 123 TP----PNAVISPPS-GYLLQQPPQFYNHNPQ 148
            P    P+ +ISP +  +    P   Y+H+ Q
Sbjct: 200 RPMKPFPHKLISPSTLNHHYLPPSSEYHHHHQ 231

[Close]

BLAST of ClCG07G010990 vs. TAIR10
Match: AT1G35830.1 (AT1G35830.1 VQ motif-containing protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.0e-11
Identity = 40/101 (39.60%), Postives = 50/101 (49.50%), Query Frame = 1


Query: 63  RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSI-----------SPNFSLGY 122
           R+R+RASRR PTT+L TDT+NFRAMVQ+FTG P  PF+              SP+  L Y
Sbjct: 100 RKRTRASRRAPTTVLTTDTSNFRAMVQEFTGVPASPFSHPFSSTTRRFDIFRSPSDPLTY 159

Query: 123 GGIRPSNFATPPNAVISPPSGYLLQQPPQFYNHNPQPFVFP 153
              RP      P   ++P +  LL      ++H      FP
Sbjct: 160 NPFRPI-----PQKPLNPSTSSLL----NLHHHTTTSMTFP 191

[Close]

BLAST of ClCG07G010990 vs. NCBI nr
Match: gi|659101968|ref|XP_008451884.1| (PREDICTED: uncharacterized protein LOC103493042 [Cucumis melo])

HSP 1 Score: 372.1 bits (954), Expect = 6.5e-100
Identity = 186/212 (87.74%), Postives = 193/212 (91.04%), Query Frame = 1


Query: 1   MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDATASGNTGGSSVLNPEGRVGK 60
           MSG  DWLQFYHQNLSSTA PP S  STSE+IF DRVSDATAS NT GS+ LNPEGRVGK
Sbjct: 1   MSG--DWLQFYHQNLSSTAPPPPSHHSTSEMIFADRVSDATASANTLGSTGLNPEGRVGK 60

Query: 61  PVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGYGGIRPSNFA 120
           PVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLG+GGIR SNF+
Sbjct: 61  PVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGIRQSNFS 120

Query: 121 TPPNAVIS-PPSGYLLQQPPQFYNHNPQPFVFPTAAHGGDFLQRLSAPRPANGGVAGDGF 180
           T  NA IS PPSGYLLQQPPQ YNHNPQPFVFPT AHGGDFLQRLSAPRPANGGVAGDGF
Sbjct: 121 TSQNAAISPPPSGYLLQQPPQLYNHNPQPFVFPTVAHGGDFLQRLSAPRPANGGVAGDGF 180

Query: 181 LMESVVASQIPPAGASADSSNENNGGNGRLLF 212
           L+ES V+SQIPPAGASADSSNE+NGGNGRLLF
Sbjct: 181 LIESAVSSQIPPAGASADSSNESNGGNGRLLF 210

[Close]

BLAST of ClCG07G010990 vs. NCBI nr
Match: gi|778691256|ref|XP_011653250.1| (PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 3.3e-96
Identity = 184/218 (84.40%), Postives = 191/218 (87.61%), Query Frame = 1


Query: 1   MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDAT------ASGNTGGSSVLNP 60
           MSG  DWLQFYHQNLSSTAAPP SD STSE+ FVDRVSDAT      AS NT GS+ LNP
Sbjct: 1   MSG--DWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNP 60

Query: 61  EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGYGGI 120
           EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLG+GGI
Sbjct: 61  EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGI 120

Query: 121 RPSNFATPPNAVIS-PPSGYLLQQPPQFYNHNPQPFVFPTAAHGGDFLQRLSAPRPANGG 180
             SNF T  NA IS PPSGYLLQQPPQ YNHNPQ F+FPT AHGGDFLQRLSAPRPANG 
Sbjct: 121 HQSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGA 180

Query: 181 VAGDGFLMESVVASQIPPAGASADSSNENNGGNGRLLF 212
           VAGDGFL+ES V+SQIPPAGASADSSNE+NGGNGRLLF
Sbjct: 181 VAGDGFLIESAVSSQIPPAGASADSSNESNGGNGRLLF 216

[Close]

BLAST of ClCG07G010990 vs. NCBI nr
Match: gi|700198327|gb|KGN53485.1| (hypothetical protein Csa_4G056730 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 4.7e-82
Identity = 163/211 (77.25%), Postives = 171/211 (81.04%), Query Frame = 1


Query: 1   MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDAT------ASGNTGGSSVLNP 60
           MSG  DWLQFYHQNLSSTAAPP SD STSE+ FVDRVSDAT      AS NT GS+ LNP
Sbjct: 1   MSG--DWLQFYHQNLSSTAAPPPSDHSTSEMFFVDRVSDATGVITTTASVNTLGSTGLNP 60

Query: 61  EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISPNFSLGYGGI 120
           EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSISPNFSLG+GGI
Sbjct: 61  EGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFTSSISPNFSLGFGGI 120

Query: 121 RPSNFATPPNAVIS-PPSGYLLQQPPQFYNHNPQPFVFPTAAHGGDFLQRLSAPRPANGG 180
             SNF T  NA IS PPSGYLLQQPPQ YNHNPQ F+FPT AHGGDFLQRLSAPRPANG 
Sbjct: 121 HQSNFPTSQNATISPPPSGYLLQQPPQLYNHNPQQFMFPTVAHGGDFLQRLSAPRPANGA 180

Query: 181 VAGDGFLMESVVASQIPPAGASADSSNENNG 205
           VAGDGFL+ES +         +A  S+E  G
Sbjct: 181 VAGDGFLIESAIPPTRAMGVMAAYCSDEEEG 209

[Close]

BLAST of ClCG07G010990 vs. NCBI nr
Match: gi|590711222|ref|XP_007049045.1| (Uncharacterized protein TCM_002034 [Theobroma cacao])

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 112/233 (48.07%), Postives = 137/233 (58.80%), Query Frame = 1


Query: 1   MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDAT---------------ASGN 60
           MSGP DW QFY QNLS   AP      +SE  F D+ SDAT               ASG 
Sbjct: 5   MSGPTDWAQFYQQNLSVQEAPNRGRVVSSESAFGDQGSDATVVTTTITSSSAPSPLASGP 64

Query: 61  TGGSSV-LNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF-ASSI 120
            G S+  L+PEGRV KP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP+ PF   S 
Sbjct: 65  AGSSAGHLSPEGRVSKPLRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFPGHSG 124

Query: 121 SPNFSLGYGGIRPSNFATPPNAVISPPSGYLL--------QQPPQFYNHNPQPFVFPTAA 180
            PNF  G+GG +P      P +++ PP G+ L        QQ  QF   N QP++F  ++
Sbjct: 125 GPNFGFGFGGRQPH---VNPGSLMIPPGGFHLQYQQQQQPQQQHQFQQQN-QPYMFSLSS 184

Query: 181 H----GGDFLQRLSA-PRPANGGVAGDGFLMESVVASQIPPAGASADSSNENN 204
           +    G  FLQRL   PRP   G   DGF++E   +SQ+PP+   + + N +N
Sbjct: 185 NNPGAGDLFLQRLGGNPRPNMEG--SDGFVVEG-ASSQVPPSRTPSSNENRSN 230

[Close]

BLAST of ClCG07G010990 vs. NCBI nr
Match: gi|763775772|gb|KJB42895.1| (hypothetical protein B456_007G173300 [Gossypium raimondii])

HSP 1 Score: 160.2 bits (404), Expect = 3.9e-36
Identity = 109/246 (44.31%), Postives = 130/246 (52.85%), Query Frame = 1


Query: 1   MSGPADWLQFYHQNLSSTAAPPSSDQSTSELIFVDRVSDATA-----------------S 60
           MS P DW QFY   LS+   P      TSE +F D+ SD                    S
Sbjct: 1   MSTPTDWPQFYDHALSNQEIPNRVRILTSESVFGDQGSDTAVLTTPTVTSSSAPLSSLGS 60

Query: 61  GNTGGSSV--LNPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFAS 120
           G  GGSS   L+PEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGP+ PFA 
Sbjct: 61  GLGGGSSGGHLSPEGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFAG 120

Query: 121 SI----SPNFSLGYGGIRPSNFATPPNAVISPPSGYLL------QQPPQFYNHNPQPFVF 180
                  PNF  G+G     + + P N ++ PP+G+ L      Q   Q  +H  QP +F
Sbjct: 121 GAPHHGGPNFGYGFGTRHQPHNSNPNNPLMLPPTGFHLQYQQQQQHQNQLIHHQNQPLMF 180

Query: 181 P------TAAHGGDFLQRLSAPRPANGGVAGDGFLMESVVASQIPPAGASADSSNENNGG 212
                  + A G  F QRL        GV G   +  S  +SQ+P +  S  SSN+N   
Sbjct: 181 SLNSNDNSPAPGELFFQRL--------GVGGGVNMQGSDASSQVPASRTSTSSSNDNR-S 237

The following BLAST results are available for this feature:

BLAST of ClCG07G010990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VQ22_ARATH	1.6e-21	44.10	VQ motif-containing protein 22 OS=Arabidopsis thaliana GN=VQ22 PE=2 SV=1	[more]

BLAST of ClCG07G010990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV74_CUCSA	3.3e-82	77.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056730 PE=4 SV=1	[more]
A0A061DLC3_THECC	9.0e-40	48.07	Uncharacterized protein OS=Theobroma cacao GN=TCM_002034 PE=4 SV=1	[more]
A0A0D2TGR0_GOSRA	2.7e-36	44.31	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G173300 PE=4 SV=1	[more]
W9REZ9_9ROSA	3.7e-33	46.78	Uncharacterized protein OS=Morus notabilis GN=L484_009324 PE=4 SV=1	[more]
B9HCD7_POPTR	1.1e-32	41.39	VQ motif-containing family protein OS=Populus trichocarpa GN=POPTR_0006s00810g P...	[more]

BLAST of ClCG07G010990 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22160.1	8.9e-23	44.10	VQ motif-containing protein	[more]
AT4G15120.1	4.1e-20	37.20	VQ motif-containing protein	[more]
AT4G39720.1	5.2e-15	32.41	VQ motif-containing protein	[more]
AT5G65170.1	2.1e-11	43.48	VQ motif-containing protein	[more]
AT1G35830.1	6.0e-11	39.60	VQ motif-containing protein	[more]

BLAST of ClCG07G010990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101968\|ref\|XP_008451884.1\|	6.5e-100	87.74	PREDICTED: uncharacterized protein LOC103493042 [Cucumis melo]	[more]
gi\|778691256\|ref\|XP_011653250.1\|	3.3e-96	84.40	PREDICTED: VQ motif-containing protein 22-like [Cucumis sativus]	[more]
gi\|700198327\|gb\|KGN53485.1\|	4.7e-82	77.25	hypothetical protein Csa_4G056730 [Cucumis sativus]	[more]
gi\|590711222\|ref\|XP_007049045.1\|	1.3e-39	48.07	Uncharacterized protein TCM_002034 [Theobroma cacao]	[more]
gi\|763775772\|gb\|KJB42895.1\|	3.9e-36	44.31	hypothetical protein B456_007G173300 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G010990.1	ClCG07G010990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 71..98 score: 4.8
None	No IPR available	PANTHER	PTHR33179	FAMILY NOT NAMED	coord: 7..147 score: 3.3
None	No IPR available	PANTHER	PTHR33179:SF7	GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MKA23	coord: 7..147 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG07G010990	Csa4G056730	Cucumber (Chinese Long) v2	cuwcgB324
ClCG07G010990	MELO3C016231	Melon (DHL92) v3.5.1	mewcgB495
ClCG07G010990	Cla005447	Watermelon (97103) v1	wcgwmB366
ClCG07G010990	Cla97C07G137730	Watermelon (97103) v2	wcgwmbB307
ClCG07G010990	Bhi01G002369	Wax gourd	wcgwgoB572
ClCG07G010990	CSPI04G07050	Wild cucumber (PI 183967)	cpiwcgB341
ClCG07G010990	Cucsa.180120	Cucumber (Gy14) v1	cgywcgB320
ClCG07G010990	CmaCh04G006070	Cucurbita maxima (Rimu)	cmawcgB675
ClCG07G010990	CmaCh16G004950	Cucurbita maxima (Rimu)	cmawcgB300
ClCG07G010990	CmoCh04G006510	Cucurbita moschata (Rifu)	cmowcgB677
ClCG07G010990	Lsi07G007880	Bottle gourd (USVL1VR-Ls)	lsiwcgB412
ClCG07G010990	Cp4.1LG14g03000	Cucurbita pepo (Zucchini)	cpewcgB209
ClCG07G010990	Cp4.1LG01g01160	Cucurbita pepo (Zucchini)	cpewcgB411
ClCG07G010990	CsGy4G006970	Cucumber (Gy14) v2	cgybwcgB302
ClCG07G010990	MELO3C016231.2	Melon (DHL92) v3.6.1	medwcgB490
ClCG07G010990	Carg11411	Silver-seed gourd	carwcgB0637
ClCG07G010990	Carg13137	Silver-seed gourd	carwcgB0046
ClCG07G010990	CsaV3_4G032360	Cucumber (Chinese Long) v3	cucwcgB342
ClCG07G010990	CsaV3_4G007280	Cucumber (Chinese Long) v3	cucwcgB343

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG07G010990	Melon (DHL92) v3.6.1	medwcgB481
ClCG07G010990	Cucurbita moschata (Rifu)	cmowcgB293
ClCG07G010990	Melon (DHL92) v3.5.1	mewcgB485